AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006725.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006725.01.T03 MTR_2g013650 97.381 420 11 0 1 420 1 420 0.0 850
MsG0280006725.01.T03 MTR_4g020620 87.651 413 24 3 5 417 1 386 0.0 708
MsG0280006725.01.T03 MTR_4g020620 89.565 345 19 2 73 417 1 328 0.0 631
MsG0280006725.01.T03 MTR_4g020620 89.565 345 19 2 73 417 1 328 0.0 631
MsG0280006725.01.T03 MTR_4g088835 69.596 421 119 4 1 417 1 416 0.0 563
MsG0280006725.01.T03 MTR_1g112730 46.667 210 110 2 42 250 125 333 1.81e-51 186
MsG0280006725.01.T03 MTR_1g112730 40.411 146 80 4 279 422 442 582 1.33e-22 101
MsG0280006725.01.T01 MTR_2g013650 94.130 494 20 2 1 486 432 924 0.0 960
MsG0280006725.01.T01 MTR_4g020620 88.367 447 21 4 1 439 401 824 0.0 777
MsG0280006725.01.T01 MTR_4g020620 87.678 422 22 3 1 414 343 742 0.0 726
MsG0280006725.01.T01 MTR_4g088835 68.826 494 134 5 2 486 432 914 0.0 675
MsG0280006725.01.T01 MTR_4g020620 75.362 276 45 3 1 268 343 603 1.64e-128 387
MsG0280006725.01.T01 MTR_1g112730 43.424 479 238 12 28 481 628 1098 1.18e-121 382
MsG0280006725.01.T01 MTR_1g092460 53.791 277 119 4 211 481 147 420 1.39e-99 306
MsG0280006725.01.T01 MTR_2g079270 53.237 278 121 4 211 482 277 551 6.18e-97 306
MsG0280006725.01.T01 MTR_0274s0030 52.399 271 121 3 211 476 84 351 2.13e-96 295
MsG0280006725.01.T01 MTR_8g060700 51.799 278 125 4 211 482 472 746 4.97e-87 283
MsG0280006725.01.T01 MTR_7g023760 54.348 230 89 3 211 440 61 274 1.03e-84 264
MsG0280006725.01.T01 MTR_7g047570 47.692 260 130 4 213 471 7 261 8.72e-78 246
MsG0280006725.01.T01 MTR_7g451770 47.692 260 130 4 213 471 7 261 8.72e-78 246
MsG0280006725.01.T01 MTR_1g092440 43.438 320 131 6 211 481 306 624 1.71e-76 252
MsG0280006725.01.T01 MTR_7g451800 47.490 259 130 4 214 471 8 261 5.63e-76 242
MsG0280006725.01.T01 MTR_7g047620 47.490 259 130 4 214 471 8 261 5.63e-76 242
MsG0280006725.01.T01 MTR_1g092465 54.460 213 89 3 229 440 228 433 3.61e-75 244
MsG0280006725.01.T01 MTR_4g086440 51.339 224 106 3 214 436 7 228 6.53e-75 239
MsG0280006725.01.T01 MTR_8g060700 58.081 198 81 1 211 408 472 667 5.22e-73 243
MsG0280006725.01.T01 MTR_8g060700 57.789 199 82 1 210 408 471 667 8.73e-73 243
MsG0280006725.01.T01 MTR_0332s0040 50.000 228 96 6 266 481 181 402 3.05e-67 222
MsG0280006725.01.T01 MTR_2g018540 47.154 246 119 6 238 475 103 345 2.00e-66 218
MsG0280006725.01.T01 MTR_2g079280 43.478 230 99 5 211 440 94 292 6.12e-58 194
MsG0280006725.01.T01 MTR_1g092490 47.475 198 97 3 290 481 58 254 8.17e-53 180
MsG0280006725.01.T01 MTR_4g007210 33.910 289 161 6 211 482 51 326 1.02e-48 172
MsG0280006725.01.T01 MTR_5g075580 29.605 152 94 4 242 390 3 144 2.58e-14 70.9
MsG0280006725.01.T01 MTR_3g062450 28.947 152 95 4 242 390 3 144 9.34e-14 68.9
MsG0280006725.01.T01 MTR_7g116940 28.947 152 95 4 242 390 3 144 1.60e-13 68.6
MsG0280006725.01.T01 MTR_4g073240 28.477 151 95 4 242 389 3 143 2.14e-13 68.2
MsG0280006725.01.T01 MTR_1g021150 28.477 151 95 4 242 389 3 143 7.31e-13 66.6
MsG0280006725.01.T01 MTR_7g116940 27.215 158 97 4 242 390 3 151 1.28e-12 65.9
MsG0280006725.01.T01 MTR_8g071040 30.894 123 75 3 242 364 3 115 1.88e-12 65.5
MsG0280006725.01.T01 MTR_5g075580 31.667 120 69 4 273 389 5 114 1.10e-11 62.4
MsG0280006725.01.T01 MTR_8g085690 32.800 125 72 4 242 365 24 137 1.55e-11 63.2
MsG0280006725.01.T01 MTR_4g073240 30.833 120 70 4 273 389 5 114 3.02e-11 60.8
MsG0280006725.01.T02 MTR_2g013650 94.130 494 20 2 1 486 432 924 0.0 960
MsG0280006725.01.T02 MTR_4g020620 88.367 447 21 4 1 439 401 824 0.0 777
MsG0280006725.01.T02 MTR_4g020620 87.678 422 22 3 1 414 343 742 0.0 726
MsG0280006725.01.T02 MTR_4g088835 68.826 494 134 5 2 486 432 914 0.0 675
MsG0280006725.01.T02 MTR_4g020620 75.362 276 45 3 1 268 343 603 1.64e-128 387
MsG0280006725.01.T02 MTR_1g112730 43.424 479 238 12 28 481 628 1098 1.18e-121 382
MsG0280006725.01.T02 MTR_1g092460 53.791 277 119 4 211 481 147 420 1.39e-99 306
MsG0280006725.01.T02 MTR_2g079270 53.237 278 121 4 211 482 277 551 6.18e-97 306
MsG0280006725.01.T02 MTR_0274s0030 52.399 271 121 3 211 476 84 351 2.13e-96 295
MsG0280006725.01.T02 MTR_8g060700 51.799 278 125 4 211 482 472 746 4.97e-87 283
MsG0280006725.01.T02 MTR_7g023760 54.348 230 89 3 211 440 61 274 1.03e-84 264
MsG0280006725.01.T02 MTR_7g047570 47.692 260 130 4 213 471 7 261 8.72e-78 246
MsG0280006725.01.T02 MTR_7g451770 47.692 260 130 4 213 471 7 261 8.72e-78 246
MsG0280006725.01.T02 MTR_1g092440 43.438 320 131 6 211 481 306 624 1.71e-76 252
MsG0280006725.01.T02 MTR_7g451800 47.490 259 130 4 214 471 8 261 5.63e-76 242
MsG0280006725.01.T02 MTR_7g047620 47.490 259 130 4 214 471 8 261 5.63e-76 242
MsG0280006725.01.T02 MTR_1g092465 54.460 213 89 3 229 440 228 433 3.61e-75 244
MsG0280006725.01.T02 MTR_4g086440 51.339 224 106 3 214 436 7 228 6.53e-75 239
MsG0280006725.01.T02 MTR_8g060700 58.081 198 81 1 211 408 472 667 5.22e-73 243
MsG0280006725.01.T02 MTR_8g060700 57.789 199 82 1 210 408 471 667 8.73e-73 243
MsG0280006725.01.T02 MTR_0332s0040 50.000 228 96 6 266 481 181 402 3.05e-67 222
MsG0280006725.01.T02 MTR_2g018540 47.154 246 119 6 238 475 103 345 2.00e-66 218
MsG0280006725.01.T02 MTR_2g079280 43.478 230 99 5 211 440 94 292 6.12e-58 194
MsG0280006725.01.T02 MTR_1g092490 47.475 198 97 3 290 481 58 254 8.17e-53 180
MsG0280006725.01.T02 MTR_4g007210 33.910 289 161 6 211 482 51 326 1.02e-48 172
MsG0280006725.01.T02 MTR_5g075580 29.605 152 94 4 242 390 3 144 2.58e-14 70.9
MsG0280006725.01.T02 MTR_3g062450 28.947 152 95 4 242 390 3 144 9.34e-14 68.9
MsG0280006725.01.T02 MTR_7g116940 28.947 152 95 4 242 390 3 144 1.60e-13 68.6
MsG0280006725.01.T02 MTR_4g073240 28.477 151 95 4 242 389 3 143 2.14e-13 68.2
MsG0280006725.01.T02 MTR_1g021150 28.477 151 95 4 242 389 3 143 7.31e-13 66.6
MsG0280006725.01.T02 MTR_7g116940 27.215 158 97 4 242 390 3 151 1.28e-12 65.9
MsG0280006725.01.T02 MTR_8g071040 30.894 123 75 3 242 364 3 115 1.88e-12 65.5
MsG0280006725.01.T02 MTR_5g075580 31.667 120 69 4 273 389 5 114 1.10e-11 62.4
MsG0280006725.01.T02 MTR_8g085690 32.800 125 72 4 242 365 24 137 1.55e-11 63.2
MsG0280006725.01.T02 MTR_4g073240 30.833 120 70 4 273 389 5 114 3.02e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006725.01.T03 AT2G33770 49.620 395 193 2 21 414 20 409 1.25e-137 416
MsG0280006725.01.T03 AT2G16920 38.585 311 184 5 28 336 116 421 1.30e-60 213
MsG0280006725.01.T03 AT2G16920 32.800 125 82 2 291 414 444 567 1.29e-15 79.7
MsG0280006725.01.T03 AT2G16920 38.585 311 184 5 28 336 116 421 1.30e-60 213
MsG0280006725.01.T03 AT2G16920 32.800 125 82 2 291 414 444 567 1.29e-15 79.7
MsG0280006725.01.T01 AT2G33770 54.873 472 189 8 24 480 439 901 2.51e-163 485
MsG0280006725.01.T01 AT2G16920 43.585 491 235 12 28 486 621 1101 1.03e-122 385
MsG0280006725.01.T01 AT2G16920 43.585 491 235 12 28 486 621 1101 1.03e-122 385
MsG0280006725.01.T01 AT1G53025 53.875 271 117 3 211 476 244 511 2.49e-94 296
MsG0280006725.01.T01 AT1G53025 53.875 271 117 3 211 476 244 511 4.07e-94 296
MsG0280006725.01.T01 AT3G15355 55.645 248 103 3 211 454 305 549 4.09e-91 290
MsG0280006725.01.T01 AT1G53023 49.638 276 117 5 211 475 21 285 2.45e-87 271
MsG0280006725.01.T01 AT1G64230 30.263 152 93 4 242 390 3 144 1.30e-14 71.6
MsG0280006725.01.T01 AT1G64230 30.263 152 93 4 242 390 3 144 1.30e-14 71.6
MsG0280006725.01.T01 AT5G41700 27.848 158 99 3 242 399 3 145 1.24e-13 68.6
MsG0280006725.01.T01 AT4G27960 33.333 123 72 3 242 364 3 115 1.66e-13 68.6
MsG0280006725.01.T01 AT5G41700 29.139 151 94 4 242 389 3 143 1.71e-13 68.6
MsG0280006725.01.T01 AT5G41700 29.139 151 94 4 242 389 3 143 1.71e-13 68.6
MsG0280006725.01.T01 AT5G41700 29.139 151 94 4 242 389 3 143 1.71e-13 68.6
MsG0280006725.01.T01 AT5G41700 29.605 152 93 5 242 389 3 144 2.76e-13 67.8
MsG0280006725.01.T01 AT5G53300 33.333 123 72 3 242 364 3 115 3.21e-13 67.8
MsG0280006725.01.T01 AT5G53300 33.333 123 72 3 242 364 3 115 3.21e-13 67.8
MsG0280006725.01.T01 AT5G53300 33.333 123 72 3 242 364 3 115 3.21e-13 67.8
MsG0280006725.01.T01 AT1G64230 29.193 161 92 5 242 390 3 153 4.72e-13 67.4
MsG0280006725.01.T01 AT3G08690 29.139 151 94 4 242 389 3 143 5.00e-13 67.0
MsG0280006725.01.T01 AT3G08690 29.139 151 94 4 242 389 3 143 5.00e-13 67.0
MsG0280006725.01.T01 AT4G27960 33.333 123 72 3 242 364 33 145 9.63e-13 67.0
MsG0280006725.01.T01 AT5G56150 27.815 151 96 4 242 389 3 143 5.27e-12 63.9
MsG0280006725.01.T01 AT1G64230 32.540 126 72 4 267 389 70 185 6.65e-12 64.7
MsG0280006725.01.T01 AT1G64230 32.540 126 72 4 267 389 70 185 6.65e-12 64.7
MsG0280006725.01.T01 AT2G16740 30.081 123 76 3 242 364 3 115 7.32e-11 60.8
MsG0280006725.01.T02 AT2G33770 54.873 472 189 8 24 480 439 901 2.51e-163 485
MsG0280006725.01.T02 AT2G16920 43.585 491 235 12 28 486 621 1101 1.03e-122 385
MsG0280006725.01.T02 AT2G16920 43.585 491 235 12 28 486 621 1101 1.03e-122 385
MsG0280006725.01.T02 AT1G53025 53.875 271 117 3 211 476 244 511 2.49e-94 296
MsG0280006725.01.T02 AT1G53025 53.875 271 117 3 211 476 244 511 4.07e-94 296
MsG0280006725.01.T02 AT3G15355 55.645 248 103 3 211 454 305 549 4.09e-91 290
MsG0280006725.01.T02 AT1G53023 49.638 276 117 5 211 475 21 285 2.45e-87 271
MsG0280006725.01.T02 AT1G64230 30.263 152 93 4 242 390 3 144 1.30e-14 71.6
MsG0280006725.01.T02 AT1G64230 30.263 152 93 4 242 390 3 144 1.30e-14 71.6
MsG0280006725.01.T02 AT5G41700 27.848 158 99 3 242 399 3 145 1.24e-13 68.6
MsG0280006725.01.T02 AT4G27960 33.333 123 72 3 242 364 3 115 1.66e-13 68.6
MsG0280006725.01.T02 AT5G41700 29.139 151 94 4 242 389 3 143 1.71e-13 68.6
MsG0280006725.01.T02 AT5G41700 29.139 151 94 4 242 389 3 143 1.71e-13 68.6
MsG0280006725.01.T02 AT5G41700 29.139 151 94 4 242 389 3 143 1.71e-13 68.6
MsG0280006725.01.T02 AT5G41700 29.605 152 93 5 242 389 3 144 2.76e-13 67.8
MsG0280006725.01.T02 AT5G53300 33.333 123 72 3 242 364 3 115 3.21e-13 67.8
MsG0280006725.01.T02 AT5G53300 33.333 123 72 3 242 364 3 115 3.21e-13 67.8
MsG0280006725.01.T02 AT5G53300 33.333 123 72 3 242 364 3 115 3.21e-13 67.8
MsG0280006725.01.T02 AT1G64230 29.193 161 92 5 242 390 3 153 4.72e-13 67.4
MsG0280006725.01.T02 AT3G08690 29.139 151 94 4 242 389 3 143 5.00e-13 67.0
MsG0280006725.01.T02 AT3G08690 29.139 151 94 4 242 389 3 143 5.00e-13 67.0
MsG0280006725.01.T02 AT4G27960 33.333 123 72 3 242 364 33 145 9.63e-13 67.0
MsG0280006725.01.T02 AT5G56150 27.815 151 96 4 242 389 3 143 5.27e-12 63.9
MsG0280006725.01.T02 AT1G64230 32.540 126 72 4 267 389 70 185 6.65e-12 64.7
MsG0280006725.01.T02 AT1G64230 32.540 126 72 4 267 389 70 185 6.65e-12 64.7
MsG0280006725.01.T02 AT2G16740 30.081 123 76 3 242 364 3 115 7.32e-11 60.8

Find 137 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGATGAATTGTTTATAAT+TGG 0.121149 2:-5398944 MsG0280006725.01.T03:CDS
GAGTTCACCATCAAGGTTTC+TGG 0.189989 2:-5395863 MsG0280006725.01.T02:three_prime_UTR
TCCTGTATTGGCAATGTTAC+TGG 0.190119 2:-5398441 MsG0280006725.01.T02:CDS
TCATAAACACTCATGAATTT+TGG 0.191589 2:-5398835 MsG0280006725.01.T03:CDS
CTAGCCATACTATGCTTATT+AGG 0.215596 2:+5398998 None:intergenic
GAAGGTGATTGCGTAATTAA+TGG 0.233180 2:-5399493 MsG0280006725.01.T03:CDS
TGCGAATCTTCAAGAAAATT+AGG 0.265210 2:+5399358 None:intergenic
GTTGATATCATATGGCAAAA+TGG 0.277272 2:-5398905 MsG0280006725.01.T03:CDS
TGGCTTGCCTCGGTTCCTTT+AGG 0.278669 2:-5399193 MsG0280006725.01.T03:CDS
ACAAATTAATATTACACATT+AGG 0.283107 2:+5395834 None:intergenic
TGTTGACGTATTAGTGGATT+TGG 0.290027 2:-5399584 MsG0280006725.01.T03:CDS
CAGGTTTGGTGTATGTTAAT+TGG 0.295995 2:-5399213 MsG0280006725.01.T03:CDS
ACTCTCTGCCCTGGATAGTA+TGG 0.296748 2:+5399331 None:intergenic
CATCAGTTTGTGATGGAAAA+AGG 0.296978 2:-5398809 MsG0280006725.01.T03:CDS
ACGAATCTTCAGAAGTTTCT+TGG 0.302328 2:+5399525 None:intergenic
TCTGTTCAACTTGTTCCTTT+TGG 0.304307 2:+5399050 None:intergenic
ACATAGCCATCTAGCTGATT+TGG 0.305121 2:+5399285 None:intergenic
CACATCCAAGCCAGATGATT+TGG 0.307229 2:-5398687 MsG0280006725.01.T03:CDS
GAGCATATTATCAAGTTTAG+AGG 0.332505 2:-5399716 MsG0280006725.01.T03:CDS
TTGATATCATATGGCAAAAT+GGG 0.335907 2:-5398904 MsG0280006725.01.T03:CDS
AGTTATTCGGATAACTGATT+TGG 0.358225 2:+5398484 None:intergenic
CAGTTACCTACAGAGTTATT+CGG 0.361797 2:+5398471 None:intergenic
CGTGGCTTGGTCAGGTTCAA+AGG 0.367253 2:-5399468 MsG0280006725.01.T03:CDS
ACATATACTTGTTGCATGTA+AGG 0.380265 2:-5396068 MsG0280006725.01.T02:CDS
ATCCTGTCGAAGTTCCCTTT+TGG 0.382551 2:+5395996 None:intergenic
TCTGAAGATTCGTTCCATTT+CGG 0.383584 2:-5399515 MsG0280006725.01.T03:CDS
GCAAAATGGGGAACATACTT+TGG 0.388474 2:-5398891 MsG0280006725.01.T03:CDS
TACGCAATCACCTTCCGAAA+TGG 0.394051 2:+5399501 None:intergenic
TGGATGAATTGTTTATAATT+GGG 0.395490 2:-5398943 MsG0280006725.01.T03:CDS
CACAATATCGCCAAAACAAC+AGG 0.405370 2:+5398604 None:intergenic
GAAAATGCCTCAGCAAGCTT+AGG 0.411552 2:+5395947 None:intergenic
CTAGATGGCTATGTGACAAT+TGG 0.415868 2:-5399276 MsG0280006725.01.T03:CDS
TATCTTGAAGGAGCTCCTAT+TGG 0.419954 2:-5396043 MsG0280006725.01.T02:CDS
TAATGGGCCGTGGCTTGGTC+AGG 0.425779 2:-5399476 MsG0280006725.01.T03:CDS
TCTTCCTAATAAGCATAGTA+TGG 0.429927 2:-5399002 MsG0280006725.01.T03:CDS
TTGTTCTGTGGAAGCAGGTT+TGG 0.434981 2:-5399227 MsG0280006725.01.T03:CDS
GGTTCTCCAGCCAAATCATC+TGG 0.436135 2:+5398677 None:intergenic
ATGGTCATGTGGAGGTGAAA+TGG 0.437018 2:-5398410 MsG0280006725.01.T02:CDS
AATGTTACTGGTTTCAAAGA+TGG 0.442138 2:-5398429 MsG0280006725.01.T02:CDS
CGTAAGTGTTGACGTATTAG+TGG 0.444648 2:-5399590 MsG0280006725.01.T03:CDS
AACTGTCACCTGTCCTGTAT+TGG 0.444670 2:-5398453 MsG0280006725.01.T02:CDS
ATTAATATTACACATTAGGT+TGG 0.445834 2:+5395838 None:intergenic
AGACCAAGGTTGATATCATA+TGG 0.446000 2:-5398913 MsG0280006725.01.T03:CDS
ACCAGTAACATTGCCAATAC+AGG 0.454925 2:+5398440 None:intergenic
CAAAATGGGGAACATACTTT+GGG 0.460122 2:-5398890 MsG0280006725.01.T03:CDS
GTAATTAATGGGCCGTGGCT+TGG 0.460290 2:-5399481 MsG0280006725.01.T03:CDS
CTCAGATGACTGATTCAGAC+TGG 0.461326 2:-5399810 MsG0280006725.01.T03:CDS
CAAATCATCTGGCTTGGATG+TGG 0.466764 2:+5398688 None:intergenic
AAGGTGATTGCGTAATTAAT+GGG 0.467790 2:-5399492 MsG0280006725.01.T03:CDS
CTGCTTCCAAATCAGCTAGA+TGG 0.468274 2:-5399291 MsG0280006725.01.T03:CDS
TGAGTGTTTATGACATTCAC+AGG 0.469948 2:+5398845 None:intergenic
TCCAGCCAAATCATCTGGCT+TGG 0.472208 2:+5398682 None:intergenic
ACAGGATTTAAAATTATGCT+TGG 0.472526 2:-5395980 MsG0280006725.01.T02:CDS
ACTGTTTGTTCTGTGGAAGC+AGG 0.472556 2:-5399232 MsG0280006725.01.T03:CDS
AAGTGAGCATGAAAACCAAA+AGG 0.473074 2:-5396011 MsG0280006725.01.T02:CDS
CGAAGTTGAGTTCACCATCA+AGG 0.473832 2:-5395870 MsG0280006725.01.T02:three_prime_UTR
GTTGGAACCAGAAACCTTGA+TGG 0.474030 2:+5395856 None:intergenic
GTGGATTTGGAAAACAATCA+AGG 0.476648 2:-5399571 MsG0280006725.01.T03:CDS
TCGCATGCAAACTGGCAACT+TGG 0.478429 2:-5399100 MsG0280006725.01.T03:CDS
AAACCTTGTGGTGTGTCATA+TGG 0.479650 2:-5395750 MsG0280006725.01.T02:three_prime_UTR
TCGCAGTATCCATACTATCC+AGG 0.482056 2:-5399340 MsG0280006725.01.T03:CDS
TAAGTGTATTGTTTGATGAC+GGG 0.485334 2:-5399432 MsG0280006725.01.T03:CDS
TCGGATAACTGATTTGGTAC+AGG 0.485464 2:+5398490 None:intergenic
CTGTCCAGATGGGTCTGATA+AGG 0.487275 2:+5399624 None:intergenic
GCACTCACAGTTTCTGTCGT+TGG 0.488345 2:+5398656 None:intergenic
TTCGAGAGAACATTTGCTTA+CGG 0.490827 2:-5399661 MsG0280006725.01.T03:CDS
TGCTCCTTATCAGACCCATC+TGG 0.492187 2:-5399628 MsG0280006725.01.T03:CDS
GTCACTACTGCTGCTCTCAC+TGG 0.492955 2:+5399780 None:intergenic
GTGGCTTGGTCAGGTTCAAA+GGG 0.493198 2:-5399467 MsG0280006725.01.T03:CDS
ACCCTCCCCATCTGTCCAGA+TGG 0.500046 2:+5399613 None:intergenic
AACCAAAAGGGAACTTCGAC+AGG 0.501479 2:-5395998 MsG0280006725.01.T02:CDS
ATAAGTCTAGCAATCAAAGA+TGG 0.502655 2:-5398772 MsG0280006725.01.T03:CDS
GCTTCCAGTTGCAGACCAAA+AGG 0.507212 2:-5399065 MsG0280006725.01.T03:CDS
ATCAGACCCATCTGGACAGA+TGG 0.507301 2:-5399620 MsG0280006725.01.T03:CDS
ACATTTGAATTAGAACCTAA+AGG 0.507612 2:+5399178 None:intergenic
TTGCCATATGATATCAACCT+TGG 0.509257 2:+5398910 None:intergenic
TTAAGTGTATTGTTTGATGA+CGG 0.518697 2:-5399433 MsG0280006725.01.T03:CDS
TTGATAATATGCTCTGAGCT+TGG 0.522688 2:+5399725 None:intergenic
TGGTCATGTGGAGGTGAAAT+GGG 0.524305 2:-5398409 MsG0280006725.01.T02:CDS
CCCTCCCCATCTGTCCAGAT+GGG 0.526969 2:+5399614 None:intergenic
AAAATGCCTCAGCAAGCTTA+GGG 0.527113 2:+5395948 None:intergenic
CTTGAAGGAGCTCCTATTGG+AGG 0.529520 2:-5396040 MsG0280006725.01.T02:CDS
CAAACTGGCAACTTGGTGAC+TGG 0.530987 2:-5399093 MsG0280006725.01.T03:CDS
TCCAAGCCAGATGATTTGGC+TGG 0.531372 2:-5398683 MsG0280006725.01.T03:CDS
ATAGTATGGCTAGAGAATGT+AGG 0.535300 2:-5398988 MsG0280006725.01.T03:CDS
TGGAGAGACAATCATGATGA+AGG 0.535953 2:-5399256 MsG0280006725.01.T03:CDS
GCATGTAAGGCATATCTTGA+AGG 0.536205 2:-5396055 MsG0280006725.01.T02:CDS
TTAACCTTCACTCTCTGCCC+TGG 0.537335 2:+5399322 None:intergenic
GTGGAGGTGAAATGGGCTAC+TGG 0.537468 2:-5398402 MsG0280006725.01.T02:CDS
ATTGCGTAATTAATGGGCCG+TGG 0.539539 2:-5399486 MsG0280006725.01.T03:CDS
ATGTGAACACTCCTCCATGC+TGG 0.539836 2:-5399159 MsG0280006725.01.T03:CDS
TAAGTCTAGCAATCAAAGAT+GGG 0.540967 2:-5398771 MsG0280006725.01.T03:CDS
GTATGTTAATTGGCTTGCCT+CGG 0.541575 2:-5399203 MsG0280006725.01.T03:CDS
TTGGCCTCATCAGTTTGTGA+TGG 0.547724 2:-5398816 MsG0280006725.01.T03:CDS
TCAGACCCATCTGGACAGAT+GGG 0.551064 2:-5399619 MsG0280006725.01.T03:CDS
CAGCAGTAGTGACGATCAAG+AGG 0.551238 2:-5399770 MsG0280006725.01.T03:CDS
AGCTGATTTGGAAGCAGTCG+AGG 0.556217 2:+5399297 None:intergenic
CGCAGTATCCATACTATCCA+GGG 0.557107 2:-5399339 MsG0280006725.01.T03:CDS
ATTCATCCATGCTAGAGTTG+AGG 0.560651 2:+5398957 None:intergenic
AAGATTCGTTCCATTTCGGA+AGG 0.568477 2:-5399511 MsG0280006725.01.T03:CDS
AAATCATCTGGCTTGGATGT+GGG 0.571782 2:+5398689 None:intergenic
CAAATGTTCTCTCGAATGAG+AGG 0.571997 2:+5399668 None:intergenic
TAAGTATGAGATCACTACCT+TGG 0.572957 2:-5399407 MsG0280006725.01.T03:CDS
TGGTCAGGTTCAAAGGGTGG+TGG 0.573707 2:-5399461 MsG0280006725.01.T03:CDS
ACCCATCTGGACAGATGGGG+AGG 0.579182 2:-5399615 MsG0280006725.01.T03:CDS
AAGAAACCTCAACTCTAGCA+TGG 0.582415 2:-5398963 MsG0280006725.01.T03:CDS
GGTCGATGCAAAAGAGCATA+CGG 0.583136 2:-5398735 MsG0280006725.01.T03:CDS
AGTGAGCATGAAAACCAAAA+GGG 0.588026 2:-5396010 MsG0280006725.01.T02:CDS
AGCATACGGTAAACGTACAA+TGG 0.588340 2:-5398721 MsG0280006725.01.T03:CDS
CTTTGAACCTGACCAAGCCA+CGG 0.595882 2:+5399469 None:intergenic
AGTTATCCGAATAACTCTGT+AGG 0.599419 2:-5398477 MsG0280006725.01.T02:CDS
TTCAATGAGTGACTTGAATG+TGG 0.607243 2:-5398529 MsG0280006725.01.T03:three_prime_UTR
TAACATTGCCAATACAGGAC+AGG 0.607869 2:+5398445 None:intergenic
AAGATGGGGTGTCATTCTAT+CGG 0.608470 2:-5398756 MsG0280006725.01.T03:CDS
GGCTACTGGTTTAATGACCA+AGG 0.618934 2:-5398388 MsG0280006725.01.T02:intron
TCAGATGACTGATTCAGACT+GGG 0.625007 2:-5399809 MsG0280006725.01.T03:CDS
TGAAGGAACTGTTTGTTCTG+TGG 0.628237 2:-5399239 MsG0280006725.01.T03:CDS
TTCACAGGAACTAAATTCTG+CGG 0.636282 2:+5398860 None:intergenic
GCTTGGTCAGGTTCAAAGGG+TGG 0.637694 2:-5399464 MsG0280006725.01.T03:CDS
TCAAGTTTAGAGGAAAGCAT+CGG 0.640460 2:-5399706 MsG0280006725.01.T03:CDS
TGGTTTCAAAGATGGTCATG+TGG 0.641331 2:-5398421 MsG0280006725.01.T02:CDS
GTTTAGAGGAAAGCATCGGT+AGG 0.644331 2:-5399702 MsG0280006725.01.T03:CDS
TGGGTGCTCAACAAGTTCGT+AGG 0.644662 2:+5398634 None:intergenic
CTATCCAGGGCAGAGAGTGA+AGG 0.645378 2:-5399326 MsG0280006725.01.T03:CDS
CCCATCTGGACAGATGGGGA+GGG 0.645750 2:-5399614 MsG0280006725.01.T03:CDS
CAAGGCGGCTCAAAACAGCC+CGG 0.648648 2:-5398579 MsG0280006725.01.T03:CDS
AATTGGGAAGATAAAGACCA+AGG 0.649352 2:-5398927 MsG0280006725.01.T03:CDS
AAGTCTAGCAATCAAAGATG+GGG 0.654907 2:-5398770 MsG0280006725.01.T03:CDS
TGATATCATATGGCAAAATG+GGG 0.655752 2:-5398903 MsG0280006725.01.T03:CDS
ACTCCTCCCTAAGCTTGCTG+AGG 0.670365 2:-5395954 MsG0280006725.01.T02:CDS
ATGCCTCAGCAAGCTTAGGG+AGG 0.672343 2:+5395951 None:intergenic
TGGCGATATTGTGTTCAAGG+CGG 0.673517 2:-5398594 MsG0280006725.01.T03:CDS
ATTAGAACCTAAAGGAACCG+AGG 0.675588 2:+5399186 None:intergenic
CAGACCCATCTGGACAGATG+GGG 0.678401 2:-5399618 MsG0280006725.01.T03:CDS
AAGCCATATGACACACCACA+AGG 0.681463 2:+5395747 None:intergenic
TTGGAATCTTGCCAGCATGG+AGG 0.693099 2:+5399148 None:intergenic
TTTCAAAGATGGTCATGTGG+AGG 0.745253 2:-5398418 MsG0280006725.01.T02:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCAGATTAAATATTAA+TGG + Chr2:5398115-5398134 None:intergenic 10.0%
!!! TTCATTTTATTAAACTAAAA+AGG - Chr2:5399142-5399161 MsG0280006725.01.T03:CDS 10.0%
!! ACAAATTAATATTACACATT+AGG + Chr2:5399627-5399646 None:intergenic 15.0%
!!! TAATTATATTGAAAGCATTT+TGG - Chr2:5397905-5397924 MsG0280006725.01.T02:CDS 15.0%
!! AAATTATTAGTATTATGGAG+AGG - Chr2:5398938-5398957 MsG0280006725.01.T03:CDS 20.0%
!! AATATATTCACAAAAAGTTG+AGG + Chr2:5397101-5397120 None:intergenic 20.0%
!! AATTTCTCATTCTATCATTA+TGG - Chr2:5398464-5398483 MsG0280006725.01.T02:CDS 20.0%
!! AGTTAATTTACTTACAAGAA+AGG - Chr2:5398164-5398183 MsG0280006725.01.T02:CDS 20.0%
!! ATATATTCACAAAAAGTTGA+GGG + Chr2:5397100-5397119 None:intergenic 20.0%
!! ATATTTGTTTCATAAGAAAC+AGG + Chr2:5397252-5397271 None:intergenic 20.0%
!! ATGGATGAATTGTTTATAAT+TGG - Chr2:5396514-5396533 MsG0280006725.01.T02:intron 20.0%
!! ATTAATATTACACATTAGGT+TGG + Chr2:5399623-5399642 None:intergenic 20.0%
!! GAGGAAAATTATTAGTATTA+TGG - Chr2:5398933-5398952 MsG0280006725.01.T03:CDS 20.0%
!! GTTAATTTACTTACAAGAAA+GGG - Chr2:5398165-5398184 MsG0280006725.01.T02:CDS 20.0%
!! TAACAAAAATAAAAACCTTG+TGG - Chr2:5399696-5399715 MsG0280006725.01.T03:CDS 20.0%
!! TGGATGAATTGTTTATAATT+GGG - Chr2:5396515-5396534 MsG0280006725.01.T02:intron 20.0%
!! TTCAAGAAACTAATGTTAAT+TGG + Chr2:5398997-5399016 None:intergenic 20.0%
!! TTCTTATGAAACAAATATTG+AGG - Chr2:5397254-5397273 MsG0280006725.01.T02:intron 20.0%
!! TTCTTGTAAGTAAATTAACT+TGG + Chr2:5398164-5398183 None:intergenic 20.0%
!!! AATTTTATAACCTGAGATAT+CGG + Chr2:5397866-5397885 None:intergenic 20.0%
!!! TAAAATCTTATCATTTTCCA+AGG + Chr2:5396071-5396090 None:intergenic 20.0%
! ACATTTGAATTAGAACCTAA+AGG + Chr2:5396283-5396302 None:intergenic 25.0%
! AGAATCATTAAATATCCTCA+AGG + Chr2:5399267-5399286 None:intergenic 25.0%
! ATATTACTCTTATTCCACTT+GGG + Chr2:5399218-5399237 None:intergenic 25.0%
! GTCTTAGACTTATTTAATAG+AGG - Chr2:5398914-5398933 MsG0280006725.01.T03:CDS 25.0%
! TAATGTTAATTGGAAACCAA+GGG + Chr2:5398987-5399006 None:intergenic 25.0%
! TATATTACTCTTATTCCACT+TGG + Chr2:5399219-5399238 None:intergenic 25.0%
! TGATGATCATTATTGTGTAA+TGG + Chr2:5399093-5399112 None:intergenic 25.0%
! TGGACATTTATTTACTCAAT+AGG + Chr2:5398144-5398163 None:intergenic 25.0%
! TTAAGTGTATTGTTTGATGA+CGG - Chr2:5396025-5396044 MsG0280006725.01.T02:CDS 25.0%
! TTGATATCATATGGCAAAAT+GGG - Chr2:5396554-5396573 MsG0280006725.01.T02:intron 25.0%
! TTTATATTTACTTGTCCTTG+AGG - Chr2:5399249-5399268 MsG0280006725.01.T03:CDS 25.0%
! TTTGTAGGTTAAGAAAGATT+GGG - Chr2:5397955-5397974 MsG0280006725.01.T02:CDS 25.0%
!! AAATCCTAATTTGTATGAGT+CGG - Chr2:5398538-5398557 MsG0280006725.01.T03:three_prime_UTR 25.0%
!! ACAGGATTTAAAATTATGCT+TGG - Chr2:5399478-5399497 MsG0280006725.01.T03:CDS 25.0%
!! TAATTATGTTACTTGAGTGA+TGG + Chr2:5397891-5397910 None:intergenic 25.0%
!! TCAAGAAAATTAGGATTTTG+TGG + Chr2:5396094-5396113 None:intergenic 25.0%
!! TCATAAACACTCATGAATTT+TGG - Chr2:5396623-5396642 MsG0280006725.01.T02:intron 25.0%
!!! AAGTATAGTTATTTTACCTC+CGG + Chr2:5398815-5398834 None:intergenic 25.0%
!!! ACTTTTTCAATGAGAGAAAA+GGG - Chr2:5397837-5397856 MsG0280006725.01.T02:CDS 25.0%
!!! AGCTTTCGAATGTATTTTTT+TGG - Chr2:5398406-5398425 MsG0280006725.01.T02:CDS 25.0%
!!! GCTTTCGAATGTATTTTTTT+GGG - Chr2:5398407-5398426 MsG0280006725.01.T02:CDS 25.0%
!!! TTGCATTATATTTTTCAGCT+AGG + Chr2:5396908-5396927 None:intergenic 25.0%
AAAAACAATCCGTCATGATA+AGG + Chr2:5398340-5398359 None:intergenic 30.0%
AAATACATTCGAAAGCTTAC+AGG + Chr2:5398403-5398422 None:intergenic 30.0%
AAGAAAGATTTGGAAACTTG+TGG - Chr2:5397668-5397687 MsG0280006725.01.T02:CDS 30.0%
AAGGTGATTGCGTAATTAAT+GGG - Chr2:5395966-5395985 MsG0280006725.01.T02:CDS 30.0%
ACCAATCCGAAATATTTCAT+AGG + Chr2:5397205-5397224 None:intergenic 30.0%
AGTTATTCGGATAACTGATT+TGG + Chr2:5396977-5396996 None:intergenic 30.0%
AGTTATTGTCAATGCTTTCT+AGG + Chr2:5398886-5398905 None:intergenic 30.0%
ATAACTTCACAATATGGAGT+TGG + Chr2:5397743-5397762 None:intergenic 30.0%
ATAAGTCTAGCAATCAAAGA+TGG - Chr2:5396686-5396705 MsG0280006725.01.T02:CDS 30.0%
CAAAACAACAGGAAAAATCT+GGG + Chr2:5396846-5396865 None:intergenic 30.0%
CAATCTTTCTTAACCTACAA+AGG + Chr2:5397956-5397975 None:intergenic 30.0%
CCAATCCGAAATATTTCATA+GGG + Chr2:5397204-5397223 None:intergenic 30.0%
CTAATGTTAATTGGAAACCA+AGG + Chr2:5398988-5399007 None:intergenic 30.0%
CTTTGTAGGTTAAGAAAGAT+TGG - Chr2:5397954-5397973 MsG0280006725.01.T02:CDS 30.0%
GAGCATATTATCAAGTTTAG+AGG - Chr2:5395742-5395761 MsG0280006725.01.T02:three_prime_UTR 30.0%
GTTGATATCATATGGCAAAA+TGG - Chr2:5396553-5396572 MsG0280006725.01.T02:intron 30.0%
TAACTTCACAATATGGAGTT+GGG + Chr2:5397742-5397761 None:intergenic 30.0%
TAAGTCTAGCAATCAAAGAT+GGG - Chr2:5396687-5396706 MsG0280006725.01.T02:CDS 30.0%
TAGTTGTCGAGATTAACATA+AGG - Chr2:5397402-5397421 MsG0280006725.01.T02:intron 30.0%
TATCCAGCTTCATTGAAATA+AGG + Chr2:5398686-5398705 None:intergenic 30.0%
TATTACTCTTATTCCACTTG+GGG + Chr2:5399217-5399236 None:intergenic 30.0%
TATTTAGTGAGATAGTTGGT+TGG + Chr2:5398077-5398096 None:intergenic 30.0%
TCCATATTGTGAAGTTATTC+CGG - Chr2:5397745-5397764 MsG0280006725.01.T02:CDS 30.0%
TCTTCCTAATAAGCATAGTA+TGG - Chr2:5396456-5396475 MsG0280006725.01.T02:intron 30.0%
TGAAACAAATATTGAGGAGT+TGG - Chr2:5397260-5397279 MsG0280006725.01.T02:intron 30.0%
TGATATCATATGGCAAAATG+GGG - Chr2:5396555-5396574 MsG0280006725.01.T02:intron 30.0%
TGCGAATCTTCAAGAAAATT+AGG + Chr2:5396103-5396122 None:intergenic 30.0%
TGCTTATTTAGTGAGATAGT+TGG + Chr2:5398081-5398100 None:intergenic 30.0%
TTGTGTAGTTGATTACACTA+AGG - Chr2:5399041-5399060 MsG0280006725.01.T03:CDS 30.0%
! AATCCTAATTTGTATGAGTC+GGG - Chr2:5398539-5398558 MsG0280006725.01.T03:three_prime_UTR 30.0%
! ACATATACTTGTTGCATGTA+AGG - Chr2:5399390-5399409 MsG0280006725.01.T03:CDS 30.0%
! CGACTTTATCCTTATCTTTT+CGG - Chr2:5399186-5399205 MsG0280006725.01.T03:CDS 30.0%
! CTTTTCTCTCATTGAAAAAG+TGG + Chr2:5397838-5397857 None:intergenic 30.0%
! TAAGTGTATTGTTTGATGAC+GGG - Chr2:5396026-5396045 MsG0280006725.01.T02:CDS 30.0%
! TGAAATAAGGCTTTTCGTTA+AGG + Chr2:5398673-5398692 None:intergenic 30.0%
! TTTTCTCGACAAGAAAGATT+TGG - Chr2:5397658-5397677 MsG0280006725.01.T02:CDS 30.0%
! TTTTTGGATGTCAACAAACT+GGG + Chr2:5399557-5399576 None:intergenic 30.0%
!! AATGTTACTGGTTTCAAAGA+TGG - Chr2:5397029-5397048 MsG0280006725.01.T02:intron 30.0%
!! ATATTTTTCAGCTAGGTAAC+CGG + Chr2:5396901-5396920 None:intergenic 30.0%
!! ATTTTTGGATGTCAACAAAC+TGG + Chr2:5399558-5399577 None:intergenic 30.0%
!! GATAAATGTGAAAAGCATCA+AGG - Chr2:5397491-5397510 MsG0280006725.01.T02:CDS 30.0%
!! GATAGTTGGTTGGTTTAATT+AGG + Chr2:5398067-5398086 None:intergenic 30.0%
!!! CACTTTTTCAATGAGAGAAA+AGG - Chr2:5397836-5397855 MsG0280006725.01.T02:CDS 30.0%
!!! GAGGATATTGATTTTCTCTA+TGG - Chr2:5395707-5395726 MsG0280006725.01.T02:three_prime_UTR 30.0%
!!! GATATTGATTTTCTCTATGG+TGG - Chr2:5395710-5395729 MsG0280006725.01.T02:three_prime_UTR 30.0%
AAGTCTAGCAATCAAAGATG+GGG - Chr2:5396688-5396707 MsG0280006725.01.T02:CDS 35.0%
AAGTGAGCATGAAAACCAAA+AGG - Chr2:5399447-5399466 MsG0280006725.01.T03:CDS 35.0%
AATGCTGGAGAAAAGTTCAA+TGG + Chr2:5397549-5397568 None:intergenic 35.0%
AATTGGGAAGATAAAGACCA+AGG - Chr2:5396531-5396550 MsG0280006725.01.T02:intron 35.0%
ACCGGAATAACTTCACAATA+TGG + Chr2:5397749-5397768 None:intergenic 35.0%
ACGAATCTTCAGAAGTTTCT+TGG + Chr2:5395936-5395955 None:intergenic 35.0%
AGTGAGCATGAAAACCAAAA+GGG - Chr2:5399448-5399467 MsG0280006725.01.T03:CDS 35.0%
AGTTATCCGAATAACTCTGT+AGG - Chr2:5396981-5397000 MsG0280006725.01.T02:intron 35.0%
ATAGTATGGCTAGAGAATGT+AGG - Chr2:5396470-5396489 MsG0280006725.01.T02:intron 35.0%
ATGCGAAAAACATGACAGTA+AGG + Chr2:5396344-5396363 None:intergenic 35.0%
ATTTCTTAGTAGACCCAACA+TGG + Chr2:5398789-5398808 None:intergenic 35.0%
CAAAATGGGGAACATACTTT+GGG - Chr2:5396568-5396587 MsG0280006725.01.T02:intron 35.0%
CAGTTACCTACAGAGTTATT+CGG + Chr2:5396990-5397009 None:intergenic 35.0%
CATTTCCCTCTTCAAATGTA+GGG + Chr2:5397631-5397650 None:intergenic 35.0%
CCAAAACAACAGGAAAAATC+TGG + Chr2:5396847-5396866 None:intergenic 35.0%
CCATTCTTTCTTCGAAAACA+CGG + Chr2:5398279-5398298 None:intergenic 35.0%
CCCTATGAAATATTTCGGAT+TGG - Chr2:5397201-5397220 MsG0280006725.01.T02:intron 35.0%
CTAGCCATACTATGCTTATT+AGG + Chr2:5396463-5396482 None:intergenic 35.0%
GAAGGTGATTGCGTAATTAA+TGG - Chr2:5395965-5395984 MsG0280006725.01.T02:CDS 35.0%
GATGTTACTCGTGAAGTTTA+TGG - Chr2:5397152-5397171 MsG0280006725.01.T02:CDS 35.0%
GTGGATTTGGAAAACAATCA+AGG - Chr2:5395887-5395906 MsG0280006725.01.T02:intron 35.0%
TAAGAAAGATTGGGCGAAAA+AGG - Chr2:5397964-5397983 MsG0280006725.01.T02:CDS 35.0%
TAAGTATGAGATCACTACCT+TGG - Chr2:5396051-5396070 MsG0280006725.01.T02:CDS 35.0%
TCTAGGAAATCATGTAGTCT+GGG + Chr2:5398869-5398888 None:intergenic 35.0%
TCTGAAGATTCGTTCCATTT+CGG - Chr2:5395943-5395962 MsG0280006725.01.T02:CDS 35.0%
TCTTTCTTGTCGAGAAAATC+AGG + Chr2:5397656-5397675 None:intergenic 35.0%
TGAGTGTTTATGACATTCAC+AGG + Chr2:5396616-5396635 None:intergenic 35.0%
TTCAATGAGTGACTTGAATG+TGG - Chr2:5396929-5396948 MsG0280006725.01.T02:CDS 35.0%
TTCACAGGAACTAAATTCTG+CGG + Chr2:5396601-5396620 None:intergenic 35.0%
TTCGAGAGAACATTTGCTTA+CGG - Chr2:5395797-5395816 MsG0280006725.01.T02:three_prime_UTR 35.0%
TTGCCATATGATATCAACCT+TGG + Chr2:5396551-5396570 None:intergenic 35.0%
TTGCGCCCTATGAAATATTT+CGG - Chr2:5397196-5397215 MsG0280006725.01.T02:CDS 35.0%
! ACAGTCTTGTCATGTCTTTA+TGG - Chr2:5399781-5399800 MsG0280006725.01.T03:CDS 35.0%
! ATCCTAATTTGTATGAGTCG+GGG - Chr2:5398540-5398559 MsG0280006725.01.T03:three_prime_UTR 35.0%
! ATGATGTCATGCCAAGTTTT+TGG + Chr2:5397586-5397605 None:intergenic 35.0%
! ATTGTGATAGCAGCATTTTG+AGG - Chr2:5399333-5399352 MsG0280006725.01.T03:CDS 35.0%
! CATCAGTTTGTGATGGAAAA+AGG - Chr2:5396649-5396668 MsG0280006725.01.T02:intron 35.0%
! CTTCGTCGAGTTTTCATTTT+TGG + Chr2:5399573-5399592 None:intergenic 35.0%
! CTTGGCATGACATCATTTTA+TGG - Chr2:5397590-5397609 MsG0280006725.01.T02:intron 35.0%
! GAATCTCACTTTGATGATCA+GGG - Chr2:5397443-5397462 MsG0280006725.01.T02:intron 35.0%
! TCAAGTTTAGAGGAAAGCAT+CGG - Chr2:5395752-5395771 MsG0280006725.01.T02:three_prime_UTR 35.0%
! TGAATCTCACTTTGATGATC+AGG - Chr2:5397442-5397461 MsG0280006725.01.T02:intron 35.0%
! TGACAGTAAGGTCAAGTTTT+TGG + Chr2:5396332-5396351 None:intergenic 35.0%
! TTCTAGGAAATCATGTAGTC+TGG + Chr2:5398870-5398889 None:intergenic 35.0%
! TTGATAATATGCTCTGAGCT+TGG + Chr2:5395736-5395755 None:intergenic 35.0%
! TTTTCCATCACAAACTGATG+AGG + Chr2:5396649-5396668 None:intergenic 35.0%
! TTTTGGCGATATTGTGTTCA+AGG - Chr2:5396861-5396880 MsG0280006725.01.T02:CDS 35.0%
!! AAGCCTTATTTCAATGAAGC+TGG - Chr2:5398680-5398699 MsG0280006725.01.T03:CDS 35.0%
!! AGACCAAGGTTGATATCATA+TGG - Chr2:5396545-5396564 MsG0280006725.01.T02:intron 35.0%
!! ATTTGGTACAGGTTTTTCAG+AGG + Chr2:5396960-5396979 None:intergenic 35.0%
!! CAGGTTTGGTGTATGTTAAT+TGG - Chr2:5396245-5396264 MsG0280006725.01.T02:intron 35.0%
!! CCAGATTTTTCCTGTTGTTT+TGG - Chr2:5396844-5396863 MsG0280006725.01.T02:CDS 35.0%
!! TATAGTTATTTTACCTCCGG+CGG + Chr2:5398812-5398831 None:intergenic 35.0%
!! TATTTTTCAGCTAGGTAACC+GGG + Chr2:5396900-5396919 None:intergenic 35.0%
!! TCTGTTCAACTTGTTCCTTT+TGG + Chr2:5396411-5396430 None:intergenic 35.0%
!! TGTTGACGTATTAGTGGATT+TGG - Chr2:5395874-5395893 MsG0280006725.01.T02:three_prime_UTR 35.0%
!!! TCACTTTTTTCACCTCCAAT+AGG + Chr2:5399433-5399452 None:intergenic 35.0%
AAAAGTTCAATGGCAGCTTG+AGG + Chr2:5397539-5397558 None:intergenic 40.0%
AAAATGCCTCAGCAAGCTTA+GGG + Chr2:5399513-5399532 None:intergenic 40.0%
AAACCTTGTGGTGTGTCATA+TGG - Chr2:5399708-5399727 MsG0280006725.01.T03:CDS 40.0%
AAAGCTTACAGGTGGTTCAT+TGG + Chr2:5398392-5398411 None:intergenic 40.0%
AAGAAACCTCAACTCTAGCA+TGG - Chr2:5396495-5396514 MsG0280006725.01.T02:intron 40.0%
AAGATTCGTTCCATTTCGGA+AGG - Chr2:5395947-5395966 MsG0280006725.01.T02:CDS 40.0%
AAGCTTACAGGTGGTTCATT+GGG + Chr2:5398391-5398410 None:intergenic 40.0%
ACAGTCCCTACATTTGAAGA+GGG - Chr2:5397623-5397642 MsG0280006725.01.T02:CDS 40.0%
ACATAGCCATCTAGCTGATT+TGG + Chr2:5396176-5396195 None:intergenic 40.0%
ACCAGTAACATTGCCAATAC+AGG + Chr2:5397021-5397040 None:intergenic 40.0%
AGCATACGGTAAACGTACAA+TGG - Chr2:5396737-5396756 MsG0280006725.01.T02:CDS 40.0%
ATGGTTCAGATCAGTTGAAG+CGG - Chr2:5397783-5397802 MsG0280006725.01.T02:CDS 40.0%
ATTAGAACCTAAAGGAACCG+AGG + Chr2:5396275-5396294 None:intergenic 40.0%
ATTCATCCATGCTAGAGTTG+AGG + Chr2:5396504-5396523 None:intergenic 40.0%
CAAATGTTCTCTCGAATGAG+AGG + Chr2:5395793-5395812 None:intergenic 40.0%
CACAATATCGCCAAAACAAC+AGG + Chr2:5396857-5396876 None:intergenic 40.0%
CCATCTGCAAGAGATTTCAA+AGG + Chr2:5398490-5398509 None:intergenic 40.0%
CCATTGCTGTCTAAAGAAAC+CGG + Chr2:5397767-5397786 None:intergenic 40.0%
CTAGATGGCTATGTGACAAT+TGG - Chr2:5396182-5396201 MsG0280006725.01.T02:intron 40.0%
CTAGGAAATCATGTAGTCTG+GGG + Chr2:5398868-5398887 None:intergenic 40.0%
CTTAACCTACAAAGGAGCAA+TGG + Chr2:5397948-5397967 None:intergenic 40.0%
GCAAAATGGGGAACATACTT+TGG - Chr2:5396567-5396586 MsG0280006725.01.T02:intron 40.0%
GCATGTAAGGCATATCTTGA+AGG - Chr2:5399403-5399422 MsG0280006725.01.T03:CDS 40.0%
GCATTTCCCTCTTCAAATGT+AGG + Chr2:5397632-5397651 None:intergenic 40.0%
GTTTGAGTCTCCTAAATACG+TGG - Chr2:5398570-5398589 MsG0280006725.01.T03:exon 40.0%
TAACATTGCCAATACAGGAC+AGG + Chr2:5397016-5397035 None:intergenic 40.0%
TACATTCGAAAGCTTACAGG+TGG + Chr2:5398400-5398419 None:intergenic 40.0%
TATCTTGAAGGAGCTCCTAT+TGG - Chr2:5399415-5399434 MsG0280006725.01.T03:CDS 40.0%
TCAATTAGCAGAAACTGCGA+TGG + Chr2:5398217-5398236 None:intergenic 40.0%
TGAAGGAACTGTTTGTTCTG+TGG - Chr2:5396219-5396238 MsG0280006725.01.T02:intron 40.0%
TGGAGAGACAATCATGATGA+AGG - Chr2:5396202-5396221 MsG0280006725.01.T02:intron 40.0%
TGGTTTCAAAGATGGTCATG+TGG - Chr2:5397037-5397056 MsG0280006725.01.T02:intron 40.0%
TTCCCCGACTCATACAAATT+AGG + Chr2:5398545-5398564 None:intergenic 40.0%
TTTCAAAGATGGTCATGTGG+AGG - Chr2:5397040-5397059 MsG0280006725.01.T02:intron 40.0%
! AAAAAGTTGAGGGCATACCT+TGG + Chr2:5397090-5397109 None:intergenic 40.0%
! CATGTTTTTCGCATGCAAAC+TGG - Chr2:5396350-5396369 MsG0280006725.01.T02:intron 40.0%
! CCGTGTTTTCGAAGAAAGAA+TGG - Chr2:5398276-5398295 MsG0280006725.01.T02:intron 40.0%
! CGAAAAAGGTACAGCAAGAA+TGG - Chr2:5397978-5397997 MsG0280006725.01.T02:CDS 40.0%
! CTTTTCTCCAGCATTAAAGC+CGG - Chr2:5397554-5397573 MsG0280006725.01.T02:intron 40.0%
! TCAGATGACTGATTCAGACT+GGG - Chr2:5395649-5395668 MsG0280006725.01.T02:three_prime_UTR 40.0%
! TCCTGTATTGGCAATGTTAC+TGG - Chr2:5397017-5397036 MsG0280006725.01.T02:intron 40.0%
!! AAATCATCTGGCTTGGATGT+GGG + Chr2:5396772-5396791 None:intergenic 40.0%
!! AAGATGGGGTGTCATTCTAT+CGG - Chr2:5396702-5396721 MsG0280006725.01.T02:CDS 40.0%
!! CCTTTGAAATCTCTTGCAGA+TGG - Chr2:5398487-5398506 MsG0280006725.01.T02:CDS 40.0%
!! CGTAAGTGTTGACGTATTAG+TGG - Chr2:5395868-5395887 MsG0280006725.01.T02:three_prime_UTR 40.0%
!! GCCAAGTTTTTGGAAAATGC+CGG + Chr2:5397576-5397595 None:intergenic 40.0%
!! GCTGAGGCATTTTCTGATAA+GGG - Chr2:5399520-5399539 MsG0280006725.01.T03:CDS 40.0%
!! GTATGTTAATTGGCTTGCCT+CGG - Chr2:5396255-5396274 MsG0280006725.01.T02:intron 40.0%
!! TCGGATAACTGATTTGGTAC+AGG + Chr2:5396971-5396990 None:intergenic 40.0%
!! TGCTGAGGCATTTTCTGATA+AGG - Chr2:5399519-5399538 MsG0280006725.01.T03:CDS 40.0%
!!! ATAGCAGCATTTTGAGGCAT+TGG - Chr2:5399339-5399358 MsG0280006725.01.T03:CDS 40.0%
!!! GGCGCTACATTATTTTGAAC+AGG - Chr2:5397173-5397192 MsG0280006725.01.T02:CDS 40.0%
!!! TTTTTGGAATCTTGCCAGCA+TGG + Chr2:5396316-5396335 None:intergenic 40.0%
AAAAGGGTTGCCGATATCTC+AGG - Chr2:5397853-5397872 MsG0280006725.01.T02:CDS 45.0%
AACCAAAAGGGAACTTCGAC+AGG - Chr2:5399460-5399479 MsG0280006725.01.T03:CDS 45.0%
AACTGTCACCTGTCCTGTAT+TGG - Chr2:5397005-5397024 MsG0280006725.01.T02:intron 45.0%
AAGCCATATGACACACCACA+AGG + Chr2:5399714-5399733 None:intergenic 45.0%
ACTGTTTGTTCTGTGGAAGC+AGG - Chr2:5396226-5396245 MsG0280006725.01.T02:intron 45.0%
AGGTGGTTCATTGGGATACT+CGG + Chr2:5398383-5398402 None:intergenic 45.0%
AGTCTCCTAAATACGTGGAG+TGG - Chr2:5398575-5398594 MsG0280006725.01.T03:CDS 45.0%
ATCCTGGAGAAAAACCTTCC+TGG - Chr2:5398004-5398023 MsG0280006725.01.T02:intron 45.0%
ATGGTCATGTGGAGGTGAAA+TGG - Chr2:5397048-5397067 MsG0280006725.01.T02:intron 45.0%
CAACAGATTGGTAGAGCTGA+AGG - Chr2:5398710-5398729 MsG0280006725.01.T03:CDS 45.0%
CACAGTCCCTACATTTGAAG+AGG - Chr2:5397622-5397641 MsG0280006725.01.T02:CDS 45.0%
CACATCCAAGCCAGATGATT+TGG - Chr2:5396771-5396790 MsG0280006725.01.T02:CDS 45.0%
CAGATGGTGCACTACATTTC+TGG - Chr2:5398503-5398522 MsG0280006725.01.T02:CDS 45.0%
CCGGTTTCTTTAGACAGCAA+TGG - Chr2:5397764-5397783 MsG0280006725.01.T02:CDS 45.0%
CGAAGTTGAGTTCACCATCA+AGG - Chr2:5399588-5399607 MsG0280006725.01.T03:CDS 45.0%
CGCAGTATCCATACTATCCA+GGG - Chr2:5396119-5396138 MsG0280006725.01.T02:intron 45.0%
CTACAAAGGAGCAATGGAGA+GGG + Chr2:5397942-5397961 None:intergenic 45.0%
CTCACCTGCAAATCCATGTT+GGG - Chr2:5398773-5398792 MsG0280006725.01.T03:CDS 45.0%
CTCTTCAAATGTAGGGACTG+TGG + Chr2:5397624-5397643 None:intergenic 45.0%
CTGCTTCCAAATCAGCTAGA+TGG - Chr2:5396167-5396186 MsG0280006725.01.T02:intron 45.0%
CTTCAGCTCTACCAATCTGT+TGG + Chr2:5398712-5398731 None:intergenic 45.0%
GAAAATGCCTCAGCAAGCTT+AGG + Chr2:5399514-5399533 None:intergenic 45.0%
GAGAAGGACTTGAAGAACTG+TGG + Chr2:5398633-5398652 None:intergenic 45.0%
GAGTTCACCATCAAGGTTTC+TGG - Chr2:5399595-5399614 MsG0280006725.01.T03:CDS 45.0%
GCTGGATATGACCAACAGAT+TGG - Chr2:5398698-5398717 MsG0280006725.01.T03:CDS 45.0%
GTTGGAACCAGAAACCTTGA+TGG + Chr2:5399605-5399624 None:intergenic 45.0%
TACGCAATCACCTTCCGAAA+TGG + Chr2:5395960-5395979 None:intergenic 45.0%
TACTCTTATTCCACTTGGGG+AGG + Chr2:5399214-5399233 None:intergenic 45.0%
TAGACCCAACATGGATTTGC+AGG + Chr2:5398780-5398799 None:intergenic 45.0%
TCAGGGACACCTTATCATGA+CGG - Chr2:5398328-5398347 MsG0280006725.01.T02:intron 45.0%
TCGCAGTATCCATACTATCC+AGG - Chr2:5396118-5396137 MsG0280006725.01.T02:CDS 45.0%
TGACCAGAAGGGAAAGGTAA+GGG - Chr2:5397317-5397336 MsG0280006725.01.T02:intron 45.0%
TGGCGATATTGTGTTCAAGG+CGG - Chr2:5396864-5396883 MsG0280006725.01.T02:CDS 45.0%
TGGTCATGTGGAGGTGAAAT+GGG - Chr2:5397049-5397068 MsG0280006725.01.T02:intron 45.0%
TTGGCCTCATCAGTTTGTGA+TGG - Chr2:5396642-5396661 MsG0280006725.01.T02:intron 45.0%
TTGTTCTGTGGAAGCAGGTT+TGG - Chr2:5396231-5396250 MsG0280006725.01.T02:intron 45.0%
TTTCCCTTACCTTTCCCTTC+TGG + Chr2:5397323-5397342 None:intergenic 45.0%
! AGTCTGGGGTGTTATAGTAC+AGG + Chr2:5398854-5398873 None:intergenic 45.0%
! ATCCTGTCGAAGTTCCCTTT+TGG + Chr2:5399465-5399484 None:intergenic 45.0%
! ATGGTGCACTACATTTCTGG+CGG - Chr2:5398506-5398525 MsG0280006725.01.T02:CDS 45.0%
! ATTGCGTAATTAATGGGCCG+TGG - Chr2:5395972-5395991 MsG0280006725.01.T02:CDS 45.0%
! CTCAGATGACTGATTCAGAC+TGG - Chr2:5395648-5395667 MsG0280006725.01.T02:three_prime_UTR 45.0%
! GCCGGCATTTTCCAAAAACT+TGG - Chr2:5397572-5397591 MsG0280006725.01.T02:intron 45.0%
! GGTCGATGCAAAAGAGCATA+CGG - Chr2:5396723-5396742 MsG0280006725.01.T02:CDS 45.0%
! TAAAGTGAGAAGTACGCACC+AGG + Chr2:5398025-5398044 None:intergenic 45.0%
! TGTTCCTTTTGGTCTGCAAC+TGG + Chr2:5396400-5396419 None:intergenic 45.0%
!! CAAATCATCTGGCTTGGATG+TGG + Chr2:5396773-5396792 None:intergenic 45.0%
!! GAAAATGCCGGCTTTAATGC+TGG + Chr2:5397564-5397583 None:intergenic 45.0%
!! GGCTACTGGTTTAATGACCA+AGG - Chr2:5397070-5397089 MsG0280006725.01.T02:intron 45.0%
!! GTTTAGAGGAAAGCATCGGT+AGG - Chr2:5395756-5395775 MsG0280006725.01.T02:three_prime_UTR 45.0%
AAGTCTGCCTTCTGACCAGA+AGG - Chr2:5397305-5397324 MsG0280006725.01.T02:intron 50.0%
ACATGGATTTGCAGGTGAGG+AGG + Chr2:5398772-5398791 None:intergenic 50.0%
ACCTTTCCCTTCTGGTCAGA+AGG + Chr2:5397315-5397334 None:intergenic 50.0%
ACTCTCTGCCCTGGATAGTA+TGG + Chr2:5396130-5396149 None:intergenic 50.0%
AGTCTGCCTTCTGACCAGAA+GGG - Chr2:5397306-5397325 MsG0280006725.01.T02:intron 50.0%
ATCAGACCCATCTGGACAGA+TGG - Chr2:5395838-5395857 MsG0280006725.01.T02:three_prime_UTR 50.0%
ATGTGAACACTCCTCCATGC+TGG - Chr2:5396299-5396318 MsG0280006725.01.T02:intron 50.0%
CAGCAGTAGTGACGATCAAG+AGG - Chr2:5395688-5395707 MsG0280006725.01.T02:intron 50.0%
CAGGATGTGAATCGGTCTCA+GGG + Chr2:5397694-5397713 None:intergenic 50.0%
CCAACATGGATTTGCAGGTG+AGG + Chr2:5398775-5398794 None:intergenic 50.0%
CCTACAAAGGAGCAATGGAG+AGG + Chr2:5397943-5397962 None:intergenic 50.0%
CCTCACCTGCAAATCCATGT+TGG - Chr2:5398772-5398791 MsG0280006725.01.T03:CDS 50.0%
CCTCTCCATTGCTCCTTTGT+AGG - Chr2:5397940-5397959 MsG0280006725.01.T02:CDS 50.0%
CGGTACCACTCCACGTATTT+AGG + Chr2:5398583-5398602 None:intergenic 50.0%
CTGACCAGAAGGGAAAGGTA+AGG - Chr2:5397316-5397335 MsG0280006725.01.T02:intron 50.0%
CTGTCCAGATGGGTCTGATA+AGG + Chr2:5395837-5395856 None:intergenic 50.0%
CTTGAAGGAGCTCCTATTGG+AGG - Chr2:5399418-5399437 MsG0280006725.01.T03:CDS 50.0%
CTTTGAACCTGACCAAGCCA+CGG + Chr2:5395992-5396011 None:intergenic 50.0%
GAAGAACTGTGGAAGCTCCA+GGG + Chr2:5398622-5398641 None:intergenic 50.0%
GCACTCACAGTTTCTGTCGT+TGG + Chr2:5396805-5396824 None:intergenic 50.0%
GCTTCCAGTTGCAGACCAAA+AGG - Chr2:5396393-5396412 MsG0280006725.01.T02:intron 50.0%
GGGGAGGATCCGAAAAGATA+AGG + Chr2:5399198-5399217 None:intergenic 50.0%
GGGTCTACTAAGAAATCCGC+CGG - Chr2:5398793-5398812 MsG0280006725.01.T03:CDS 50.0%
GGTGGTTCATTGGGATACTC+GGG + Chr2:5398382-5398401 None:intergenic 50.0%
GGTTCTCCAGCCAAATCATC+TGG + Chr2:5396784-5396803 None:intergenic 50.0%
GTTCATTGGGATACTCGGGA+GGG + Chr2:5398378-5398397 None:intergenic 50.0%
TCAAGTCCTTCTCTCTCTGC+AGG - Chr2:5398640-5398659 MsG0280006725.01.T03:CDS 50.0%
TCAGACCCATCTGGACAGAT+GGG - Chr2:5395839-5395858 MsG0280006725.01.T02:three_prime_UTR 50.0%
TCCAGCCAAATCATCTGGCT+TGG + Chr2:5396779-5396798 None:intergenic 50.0%
TCGCATGCAAACTGGCAACT+TGG - Chr2:5396358-5396377 MsG0280006725.01.T02:intron 50.0%
TCTACTAAGAAATCCGCCGG+AGG - Chr2:5398796-5398815 MsG0280006725.01.T03:CDS 50.0%
TGAAGAACTGTGGAAGCTCC+AGG + Chr2:5398623-5398642 None:intergenic 50.0%
TGAGATGTGTGCATGACCCT+TGG - Chr2:5398968-5398987 MsG0280006725.01.T03:CDS 50.0%
TGCTCCTTATCAGACCCATC+TGG - Chr2:5395830-5395849 MsG0280006725.01.T02:three_prime_UTR 50.0%
TGGGTGCTCAACAAGTTCGT+AGG + Chr2:5396827-5396846 None:intergenic 50.0%
TTAACCTTCACTCTCTGCCC+TGG + Chr2:5396139-5396158 None:intergenic 50.0%
TTCAATGGCAGCTTGAGGCA+GGG + Chr2:5397534-5397553 None:intergenic 50.0%
TTGGAATCTTGCCAGCATGG+AGG + Chr2:5396313-5396332 None:intergenic 50.0%
! ACAGCAAGAATGGAGCATCC+TGG - Chr2:5397988-5398007 MsG0280006725.01.T02:CDS 50.0%
! CAAACTGGCAACTTGGTGAC+TGG - Chr2:5396365-5396384 MsG0280006725.01.T02:intron 50.0%
! CACCAGGAAGGTTTTTCTCC+AGG + Chr2:5398009-5398028 None:intergenic 50.0%
! GTAATTAATGGGCCGTGGCT+TGG - Chr2:5395977-5395996 MsG0280006725.01.T02:CDS 50.0%
! TCCAAGCCAGATGATTTGGC+TGG - Chr2:5396775-5396794 MsG0280006725.01.T02:CDS 50.0%
!! AGCTGATTTGGAAGCAGTCG+AGG + Chr2:5396164-5396183 None:intergenic 50.0%
!! GTGGCTTGGTCAGGTTCAAA+GGG - Chr2:5395991-5396010 MsG0280006725.01.T02:CDS 50.0%
!!! GCAGCATTTTGAGGCATTGG+TGG - Chr2:5399342-5399361 MsG0280006725.01.T03:CDS 50.0%
AGGGTTCCACACTTCAGTCG+CGG + Chr2:5398603-5398622 None:intergenic 55.0%
ATGCCTCAGCAAGCTTAGGG+AGG + Chr2:5399510-5399529 None:intergenic 55.0%
CAAGAGCCTGCAGAGAGAGA+AGG + Chr2:5398649-5398668 None:intergenic 55.0%
CAGACCCATCTGGACAGATG+GGG - Chr2:5395840-5395859 MsG0280006725.01.T02:three_prime_UTR 55.0%
CGTGCTCGCAGGATGTGAAT+CGG + Chr2:5397702-5397721 None:intergenic 55.0%
CTATCCAGGGCAGAGAGTGA+AGG - Chr2:5396132-5396151 MsG0280006725.01.T02:intron 55.0%
GCAGGATGTGAATCGGTCTC+AGG + Chr2:5397695-5397714 None:intergenic 55.0%
GCCTTCTGACCAGAAGGGAA+AGG - Chr2:5397311-5397330 MsG0280006725.01.T02:intron 55.0%
GCTTGGTCAGGTTCAAAGGG+TGG - Chr2:5395994-5396013 MsG0280006725.01.T02:CDS 55.0%
GGTTCATTGGGATACTCGGG+AGG + Chr2:5398379-5398398 None:intergenic 55.0%
GTCACTACTGCTGCTCTCAC+TGG + Chr2:5395681-5395700 None:intergenic 55.0%
GTTCAATGGCAGCTTGAGGC+AGG + Chr2:5397535-5397554 None:intergenic 55.0%
TGGTCAGGTTCAAAGGGTGG+TGG - Chr2:5395997-5396016 MsG0280006725.01.T02:CDS 55.0%
! CTTTTCGGATCCTCCCCAAG+TGG - Chr2:5399201-5399220 MsG0280006725.01.T03:CDS 55.0%
! GTGAGAAGTACGCACCAGGA+AGG + Chr2:5398021-5398040 None:intergenic 55.0%
! TGGCTTGCCTCGGTTCCTTT+AGG - Chr2:5396265-5396284 MsG0280006725.01.T02:intron 55.0%
!! ACTCCTCCCTAAGCTTGCTG+AGG - Chr2:5399504-5399523 MsG0280006725.01.T03:CDS 55.0%
!! CGTGGCTTGGTCAGGTTCAA+AGG - Chr2:5395990-5396009 MsG0280006725.01.T02:CDS 55.0%
!! GTGGAGGTGAAATGGGCTAC+TGG - Chr2:5397056-5397075 MsG0280006725.01.T02:intron 55.0%
ACCCATCTGGACAGATGGGG+AGG - Chr2:5395843-5395862 MsG0280006725.01.T02:three_prime_UTR 60.0%
ACCCTCCCCATCTGTCCAGA+TGG + Chr2:5395848-5395867 None:intergenic 60.0%
CAAGGCGGCTCAAAACAGCC+CGG - Chr2:5396879-5396898 MsG0280006725.01.T02:CDS 60.0%
CAGCCATCGTTGGTGCGTCA+GGG - Chr2:5398311-5398330 MsG0280006725.01.T02:intron 60.0%
CCCATCTGGACAGATGGGGA+GGG - Chr2:5395844-5395863 MsG0280006725.01.T02:three_prime_UTR 60.0%
CCCTCCCCATCTGTCCAGAT+GGG + Chr2:5395847-5395866 None:intergenic 60.0%
CTCATGCGAGCAGCCATCGT+TGG - Chr2:5398301-5398320 MsG0280006725.01.T02:intron 60.0%
GCGACTGAAGTGTGGAACCC+TGG - Chr2:5398602-5398621 MsG0280006725.01.T03:CDS 60.0%
GTAGACTGCAACGTGCTCGC+AGG + Chr2:5397713-5397732 None:intergenic 60.0%
GTGGTACCGCGACTGAAGTG+TGG - Chr2:5398594-5398613 MsG0280006725.01.T03:CDS 60.0%
TGTCCCTGACGCACCAACGA+TGG + Chr2:5398317-5398336 None:intergenic 60.0%
!! TAATGGGCCGTGGCTTGGTC+AGG - Chr2:5395982-5396001 MsG0280006725.01.T02:CDS 60.0%
GCAGCCATCGTTGGTGCGTC+AGG - Chr2:5398310-5398329 MsG0280006725.01.T02:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 5395641 5399839 5395641 ID=MsG0280006725.01;Name=MsG0280006725.01
Chr2 mRNA 5395641 5398547 5395641 ID=MsG0280006725.01.T01;Parent=MsG0280006725.01;Name=MsG0280006725.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0.88|0.9|1|0.55|0.4|10|240|486
Chr2 CDS 5398389 5398547 5398389 ID=MsG0280006725.01.T01:cds;Parent=MsG0280006725.01.T01
Chr2 CDS 5398148 5398285 5398148 ID=MsG0280006725.01.T01:cds;Parent=MsG0280006725.01.T01
Chr2 CDS 5397606 5398016 5397606 ID=MsG0280006725.01.T01:cds;Parent=MsG0280006725.01.T01
Chr2 CDS 5397455 5397518 5397455 ID=MsG0280006725.01.T01:cds;Parent=MsG0280006725.01.T01
Chr2 CDS 5397078 5397217 5397078 ID=MsG0280006725.01.T01:cds;Parent=MsG0280006725.01.T01
Chr2 CDS 5396663 5396974 5396663 ID=MsG0280006725.01.T01:cds;Parent=MsG0280006725.01.T01
Chr2 CDS 5395901 5396137 5395901 ID=MsG0280006725.01.T01:cds;Parent=MsG0280006725.01.T01
Chr2 three_prime_UTR 5395697 5395900 5395697 ID=MsG0280006725.01.T01:three_prime_utr;Parent=MsG0280006725.01.T01
Chr2 three_prime_UTR 5395641 5395676 5395641 ID=MsG0280006725.01.T01:three_prime_utr;Parent=MsG0280006725.01.T01
Chr2 mRNA 5395641 5398547 5395641 ID=MsG0280006725.01.T02;Parent=MsG0280006725.01;Name=MsG0280006725.01.T02;_AED=0.44;_eAED=0.44;_QI=0|0.87|0.88|1|0.62|0.44|9|240|486
Chr2 CDS 5398389 5398547 5398389 ID=MsG0280006725.01.T02:cds;Parent=MsG0280006725.01.T02
Chr2 CDS 5398148 5398285 5398148 ID=MsG0280006725.01.T02:cds;Parent=MsG0280006725.01.T02
Chr2 CDS 5397606 5398016 5397606 ID=MsG0280006725.01.T02:cds;Parent=MsG0280006725.01.T02
Chr2 CDS 5397455 5397518 5397455 ID=MsG0280006725.01.T02:cds;Parent=MsG0280006725.01.T02
Chr2 CDS 5397078 5397217 5397078 ID=MsG0280006725.01.T02:cds;Parent=MsG0280006725.01.T02
Chr2 CDS 5396663 5396974 5396663 ID=MsG0280006725.01.T02:cds;Parent=MsG0280006725.01.T02
Chr2 CDS 5395901 5396137 5395901 ID=MsG0280006725.01.T02:cds;Parent=MsG0280006725.01.T02
Chr2 three_prime_UTR 5395697 5395900 5395697 ID=MsG0280006725.01.T02:three_prime_utr;Parent=MsG0280006725.01.T02
Chr2 three_prime_UTR 5395641 5395676 5395641 ID=MsG0280006725.01.T02:three_prime_utr;Parent=MsG0280006725.01.T02
Chr2 mRNA 5395641 5399839 5395641 ID=MsG0280006725.01.T03;Parent=MsG0280006725.01;Name=MsG0280006725.01.T03;_AED=0.45;_eAED=0.53;_QI=0|0.87|0.88|1|0.62|0.55|9|1721|422
Chr2 exon 5395697 5396134 5395697 ID=MsG0280006725.01.T03:exon:2218;Parent=MsG0280006725.01.T03
Chr2 exon 5398389 5399839 5398389 ID=MsG0280006725.01.T03:exon:2217;Parent=MsG0280006725.01.T03
Chr2 CDS 5398571 5399839 5398571 ID=MsG0280006725.01.T03:cds;Parent=MsG0280006725.01.T03
Chr2 three_prime_UTR 5398389 5398570 5398389 ID=MsG0280006725.01.T03:three_prime_utr;Parent=MsG0280006725.01.T03
Chr2 three_prime_UTR 5398148 5398285 5398148 ID=MsG0280006725.01.T03:three_prime_utr;Parent=MsG0280006725.01.T03
Chr2 three_prime_UTR 5397606 5398016 5397606 ID=MsG0280006725.01.T03:three_prime_utr;Parent=MsG0280006725.01.T03
Chr2 three_prime_UTR 5397455 5397518 5397455 ID=MsG0280006725.01.T03:three_prime_utr;Parent=MsG0280006725.01.T03
Chr2 three_prime_UTR 5397078 5397217 5397078 ID=MsG0280006725.01.T03:three_prime_utr;Parent=MsG0280006725.01.T03
Chr2 three_prime_UTR 5396663 5396974 5396663 ID=MsG0280006725.01.T03:three_prime_utr;Parent=MsG0280006725.01.T03
Chr2 three_prime_UTR 5395697 5396134 5395697 ID=MsG0280006725.01.T03:three_prime_utr;Parent=MsG0280006725.01.T03
Chr2 three_prime_UTR 5395641 5395676 5395641 ID=MsG0280006725.01.T03:three_prime_utr;Parent=MsG0280006725.01.T03
Gene Sequence

>MsG0280006725.01.T03

ATGGAAGCTCAGATGACTGATTCAGACTGGGAGTCTTCCAGTGAGAGCAGCAGTAGTGACGATCAAGAGGATATTGATTTTCTCTATGGTGGCCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATCGGTAGGATAGACGATTTCCTCTCATTCGAGAGAACATTTGCTTACGGTGATGTTGTGTGCTCCTTATCAGACCCATCTGGACAGATGGGGAGGGTCGTAAGTGTTGACGTATTAGTGGATTTGGAAAACAATCAAGGAAATGTGTTAAAAAATGTGAACTCCAAGAAACTTCTGAAGATTCGTTCCATTTCGGAAGGTGATTGCGTAATTAATGGGCCGTGGCTTGGTCAGGTTCAAAGGGTGGTGGACAGATTAAGTGTATTGTTTGATGACGGGACTAAGTATGAGATCACTACCTTGGAAAATGATAAGATTTTACCACAAAATCCTAATTTTCTTGAAGATTCGCAGTATCCATACTATCCAGGGCAGAGAGTGAAGGTTAAGTCCTCGACTGCTTCCAAATCAGCTAGATGGCTATGTGACAATTGGAGAGACAATCATGATGAAGGAACTGTTTGTTCTGTGGAAGCAGGTTTGGTGTATGTTAATTGGCTTGCCTCGGTTCCTTTAGGTTCTAATTCAAATGTGAACACTCCTCCATGCTGGCAAGATTCCAAAAACTTGACCTTACTGTCATGTTTTTCGCATGCAAACTGGCAACTTGGTGACTGGTGTATGCTTCCAGTTGCAGACCAAAAGGAACAAGTTGAACAGATGATTCGAGATTCATCAGATAGTTATCTTCCTAATAAGCATAGTATGGCTAGAGAATGTAGGAGAAGAAACCTCAACTCTAGCATGGATGAATTGTTTATAATTGGGAAGATAAAGACCAAGGTTGATATCATATGGCAAAATGGGGAACATACTTTGGGCTCAGATCCGCAGAATTTAGTTCCTGTGAATGTCATAAACACTCATGAATTTTGGCCTCATCAGTTTGTGATGGAAAAAGGTACTTCTGATGATGATAAGTCTAGCAATCAAAGATGGGGTGTCATTCTATCGGTCGATGCAAAAGAGCATACGGTAAACGTACAATGGAGAACAGCTCCCACATCCAAGCCAGATGATTTGGCTGGAGAACCAACGACAGAAACTGTGAGTGCCTACGAACTTGTTGAGCACCCAGATTTTTCCTGTTGTTTTGGCGATATTGTGTTCAAGGCGGCTCAAAACAGCCCGGTTACCTAG

>MsG0280006725.01.T01

ATGAGTGACTTGAATGTGGAAGCTCCTCTGAAAAACCTGTACCAAATCAGTTATCCGAATAACTCTGTAGGTAACTGTCACCTGTCCTGTATTGGCAATGTTACTGGTTTCAAAGATGGTCATGTGGAGGTGAAATGGGCTACTGGTTTAATGACCAAGGTTGCGCCCTATGAAATATTTCGGATTGGTAAACATGAAGCTTCGACTGTAACTCCTGTTTCTTATGAAACAAATATTGAGGAGTTGGTTGAAGAGATTACTGAACATGTAAGTCTGCCTTCTGACCAGAAGGGAAAGGGCTTGTCAGATTGTAACAGTGATAGAGATAAATGTGAAAAGCATCAAGGAGAGAGTAGTTCGTTTTCCCTGCCTCAAGCTGCCATTGAACTTTTCTCCAGCATTAAAGCCGGCATTTTCCAAAAACTTGGCATGACATCATTTTATGGAGCTGTTTCCACAGTCCCTACATTTGAAGAGGGAAATGCACCTGATTTTCTCGACAAGAAAGATTTGGAAACTTGTGGCCCTGAGACCGATTCACATCCTGCGAGCACGTTGCAGTCTACTGAAGACCCAACTCCATATTGTGAAGTTATTCCGGTTTCTTTAGACAGCAATGGTTCAGATCAGTTGAAGCGGTTTGATGTAATTGATACTTGTTCAGATCACCACTTTTTCAATGAGAGAAAAGGGTTGCCGATATCTCAGGTTAAGAAAGATTGGGCGAAAAAGGTACAGCAAGAATGGAGCATCCTGGAGAAAAACCTTCCTGAAACTATTTATGTCCGTGTTTTCGAAGAAAGAATGGATCTCATGCGAGCAGCCATCGTTGGTGCGTCAGGGACACCTTATCATGACGGATTGTTTTTCTTCGATATATGTTTCCCTCCCGAGTATCCCAATGAACCACCTATGGTGCACTACATTTCTGGCGGATTAAGAATAAATCCTAATTTGTATGAGTCGGGGAAAGTGTGTTTGAGTCTCCTAAATACGTGGAGTGGTACCGCGACTGAAGTGTGGAACCCTGGAGCTTCCACAGTTCTTCAAGTCCTTCTCTCTCTGCAGGCTCTTGTCCTTAACGAAAAGCCTTATTTCAATGAAGCTGGATATGACCAACAGATTGGTAGAGCTGAAGGAGAGAAAAATTCTGTGAGTTACAATGAGAATGCTTTCCTCCTCACCTGCAAATCCATGTTGGGTCTACTAAGAAATCCGCCGGAGCAGCATTTTGAGGCATTGGTGGAAGAACACTTTCGACAACGCTCAAAACATATACTTGTTGCATGTAAGGCATATCTTGAAGGAGCTCCTATTGGAGGTGAAAAAAGTGAGCATGAAAACCAAAAGGGAACTTCGACAGGATTTAAAATTATGCTTGGTAAACTCCTCCCTAAGCTTGCTGAGGCATTTTCTGATAAGGGAATTGATTGCTCCCAGTTTGTTGACATCCAAAAATGA

>MsG0280006725.01.T02

ATGAGTGACTTGAATGTGGAAGCTCCTCTGAAAAACCTGTACCAAATCAGTTATCCGAATAACTCTGTAGGTAACTGTCACCTGTCCTGTATTGGCAATGTTACTGGTTTCAAAGATGGTCATGTGGAGGTGAAATGGGCTACTGGTTTAATGACCAAGGTTGCGCCCTATGAAATATTTCGGATTGGTAAACATGAAGCTTCGACTGTAACTCCTGTTTCTTATGAAACAAATATTGAGGAGTTGGTTGAAGAGATTACTGAACATGTAAGTCTGCCTTCTGACCAGAAGGGAAAGGGCTTGTCAGATTGTAACAGTGATAGAGATAAATGTGAAAAGCATCAAGGAGAGAGTAGTTCGTTTTCCCTGCCTCAAGCTGCCATTGAACTTTTCTCCAGCATTAAAGCCGGCATTTTCCAAAAACTTGGCATGACATCATTTTATGGAGCTGTTTCCACAGTCCCTACATTTGAAGAGGGAAATGCACCTGATTTTCTCGACAAGAAAGATTTGGAAACTTGTGGCCCTGAGACCGATTCACATCCTGCGAGCACGTTGCAGTCTACTGAAGACCCAACTCCATATTGTGAAGTTATTCCGGTTTCTTTAGACAGCAATGGTTCAGATCAGTTGAAGCGGTTTGATGTAATTGATACTTGTTCAGATCACCACTTTTTCAATGAGAGAAAAGGGTTGCCGATATCTCAGGTTAAGAAAGATTGGGCGAAAAAGGTACAGCAAGAATGGAGCATCCTGGAGAAAAACCTTCCTGAAACTATTTATGTCCGTGTTTTCGAAGAAAGAATGGATCTCATGCGAGCAGCCATCGTTGGTGCGTCAGGGACACCTTATCATGACGGATTGTTTTTCTTCGATATATGTTTCCCTCCCGAGTATCCCAATGAACCACCTATGGTGCACTACATTTCTGGCGGATTAAGAATAAATCCTAATTTGTATGAGTCGGGGAAAGTGTGTTTGAGTCTCCTAAATACGTGGAGTGGTACCGCGACTGAAGTGTGGAACCCTGGAGCTTCCACAGTTCTTCAAGTCCTTCTCTCTCTGCAGGCTCTTGTCCTTAACGAAAAGCCTTATTTCAATGAAGCTGGATATGACCAACAGATTGGTAGAGCTGAAGGAGAGAAAAATTCTGTGAGTTACAATGAGAATGCTTTCCTCCTCACCTGCAAATCCATGTTGGGTCTACTAAGAAATCCGCCGGAGCAGCATTTTGAGGCATTGGTGGAAGAACACTTTCGACAACGCTCAAAACATATACTTGTTGCATGTAAGGCATATCTTGAAGGAGCTCCTATTGGAGGTGAAAAAAGTGAGCATGAAAACCAAAAGGGAACTTCGACAGGATTTAAAATTATGCTTGGTAAACTCCTCCCTAAGCTTGCTGAGGCATTTTCTGATAAGGGAATTGATTGCTCCCAGTTTGTTGACATCCAAAAATGA

Protein sequence

>MsG0280006725.01.T03

MEAQMTDSDWESSSESSSSDDQEDIDFLYGGQAQSILSSLEESIGRIDDFLSFERTFAYGDVVCSLSDPSGQMGRVVSVDVLVDLENNQGNVLKNVNSKKLLKIRSISEGDCVINGPWLGQVQRVVDRLSVLFDDGTKYEITTLENDKILPQNPNFLEDSQYPYYPGQRVKVKSSTASKSARWLCDNWRDNHDEGTVCSVEAGLVYVNWLASVPLGSNSNVNTPPCWQDSKNLTLLSCFSHANWQLGDWCMLPVADQKEQVEQMIRDSSDSYLPNKHSMARECRRRNLNSSMDELFIIGKIKTKVDIIWQNGEHTLGSDPQNLVPVNVINTHEFWPHQFVMEKGTSDDDKSSNQRWGVILSVDAKEHTVNVQWRTAPTSKPDDLAGEPTTETVSAYELVEHPDFSCCFGDIVFKAAQNSPVT*

>MsG0280006725.01.T01

MSDLNVEAPLKNLYQISYPNNSVGNCHLSCIGNVTGFKDGHVEVKWATGLMTKVAPYEIFRIGKHEASTVTPVSYETNIEELVEEITEHVSLPSDQKGKGLSDCNSDRDKCEKHQGESSSFSLPQAAIELFSSIKAGIFQKLGMTSFYGAVSTVPTFEEGNAPDFLDKKDLETCGPETDSHPASTLQSTEDPTPYCEVIPVSLDSNGSDQLKRFDVIDTCSDHHFFNERKGLPISQVKKDWAKKVQQEWSILEKNLPETIYVRVFEERMDLMRAAIVGASGTPYHDGLFFFDICFPPEYPNEPPMVHYISGGLRINPNLYESGKVCLSLLNTWSGTATEVWNPGASTVLQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLLTCKSMLGLLRNPPEQHFEALVEEHFRQRSKHILVACKAYLEGAPIGGEKSEHENQKGTSTGFKIMLGKLLPKLAEAFSDKGIDCSQFVDIQK*

>MsG0280006725.01.T02

MSDLNVEAPLKNLYQISYPNNSVGNCHLSCIGNVTGFKDGHVEVKWATGLMTKVAPYEIFRIGKHEASTVTPVSYETNIEELVEEITEHVSLPSDQKGKGLSDCNSDRDKCEKHQGESSSFSLPQAAIELFSSIKAGIFQKLGMTSFYGAVSTVPTFEEGNAPDFLDKKDLETCGPETDSHPASTLQSTEDPTPYCEVIPVSLDSNGSDQLKRFDVIDTCSDHHFFNERKGLPISQVKKDWAKKVQQEWSILEKNLPETIYVRVFEERMDLMRAAIVGASGTPYHDGLFFFDICFPPEYPNEPPMVHYISGGLRINPNLYESGKVCLSLLNTWSGTATEVWNPGASTVLQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLLTCKSMLGLLRNPPEQHFEALVEEHFRQRSKHILVACKAYLEGAPIGGEKSEHENQKGTSTGFKIMLGKLLPKLAEAFSDKGIDCSQFVDIQK*