Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048652.01.T01 | BAU98053.1 | 84.916 | 358 | 9 | 1 | 1 | 313 | 1 | 358 | 0 | 587 |
MsG0080048652.01.T02 | BAU98053.1 | 84.916 | 358 | 9 | 1 | 1 | 313 | 1 | 358 | 0 | 587 |
MsG0080048652.01.T03 | BAU98053.1 | 84.916 | 358 | 9 | 1 | 1 | 313 | 1 | 358 | 0 | 587 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048652.01.T01 | P83004 | 33.835 | 133 | 87 | 1 | 161 | 293 | 28 | 159 | 2.55E-16 | 79 |
MsG0080048652.01.T02 | P83004 | 33.835 | 133 | 87 | 1 | 161 | 293 | 28 | 159 | 2.55E-16 | 79 |
MsG0080048652.01.T03 | P83004 | 33.835 | 133 | 87 | 1 | 161 | 293 | 28 | 159 | 2.55E-16 | 79 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048652.01.T01 | A0A161JQR4 | 84.916 | 358 | 9 | 1 | 1 | 313 | 1 | 358 | 0.0 | 587 |
MsG0080048652.01.T02 | A0A161JQR4 | 84.916 | 358 | 9 | 1 | 1 | 313 | 1 | 358 | 0.0 | 587 |
MsG0080048652.01.T03 | A0A161JQR4 | 84.916 | 358 | 9 | 1 | 1 | 313 | 1 | 358 | 0.0 | 587 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047967.01 | MsG0080048652.01 | -0.803874 | 2.830064e-49 | 1.438280e-46 |
MsG0080048509.01 | MsG0080048652.01 | 0.813751 | 2.183753e-51 | 1.438214e-48 |
MsG0080048633.01 | MsG0080048652.01 | 0.929884 | 3.659235e-93 | 2.094685e-88 |
MsG0080048652.01 | MsG0080048694.01 | -0.835894 | 1.286077e-56 | 1.594360e-53 |
MsG0080048652.01 | MsG0080048695.01 | -0.835692 | 1.447617e-56 | 1.783859e-53 |
MsG0080048652.01 | MsG0080048697.01 | -0.805120 | 1.555875e-49 | 8.164636e-47 |
MsG0080048652.01 | MsG0080048889.01 | 0.809049 | 2.292677e-50 | 1.332187e-47 |
MsG0080048652.01 | MsG0080048948.01 | -0.848374 | 6.385343e-60 | 1.169369e-56 |
MsG0080048652.01 | MsG0180000076.01 | 0.801863 | 7.367877e-49 | 3.556782e-46 |
MsG0080048652.01 | MsG0180000367.01 | 0.825526 | 4.468688e-54 | 4.083172e-51 |
MsG0080048652.01 | MsG0180001079.01 | 0.852071 | 5.872227e-61 | 1.212789e-57 |
MsG0080048652.01 | MsG0180001108.01 | 0.821470 | 3.969406e-53 | 3.232118e-50 |
MsG0080048652.01 | MsG0180001234.01 | 0.832099 | 1.146971e-55 | 1.269143e-52 |
MsG0080048652.01 | MsG0180001497.01 | 0.818225 | 2.190463e-52 | 1.629975e-49 |
MsG0080048652.01 | MsG0180001925.01 | -0.815806 | 7.654711e-52 | 5.331104e-49 |
MsG0080048652.01 | MsG0180002439.01 | -0.800764 | 1.236594e-48 | 5.805641e-46 |
MsG0080048652.01 | MsG0180002808.01 | 0.875067 | 4.125842e-68 | 1.901175e-64 |
MsG0080048652.01 | MsG0180003375.01 | 0.848873 | 4.643209e-60 | 8.642738e-57 |
MsG0080048652.01 | MsG0180003482.01 | 0.849159 | 3.866040e-60 | 7.264666e-57 |
MsG0080048652.01 | MsG0180003483.01 | 0.853016 | 3.156872e-61 | 6.724218e-58 |
MsG0080048652.01 | MsG0180003484.01 | 0.821343 | 4.246206e-53 | 3.445462e-50 |
MsG0080048652.01 | MsG0180003779.01 | -0.817621 | 2.998985e-52 | 2.194945e-49 |
MsG0080048652.01 | MsG0180003955.01 | 0.821598 | 3.708917e-53 | 3.030772e-50 |
MsG0080048652.01 | MsG0180004124.01 | -0.831478 | 1.632175e-55 | 1.773353e-52 |
MsG0080048652.01 | MsG0180004125.01 | -0.825726 | 4.005928e-54 | 3.681448e-51 |
MsG0080048652.01 | MsG0180004226.01 | -0.800007 | 1.763620e-48 | 8.122491e-46 |
MsG0080048652.01 | MsG0180004559.01 | 0.849492 | 3.123973e-60 | 5.932330e-57 |
MsG0080048652.01 | MsG0180004688.01 | 0.825469 | 4.609020e-54 | 4.204554e-51 |
MsG0080048652.01 | MsG0180005054.01 | 0.805441 | 1.333130e-49 | 7.053432e-47 |
MsG0080048652.01 | MsG0180005353.01 | 0.807764 | 4.310186e-50 | 2.421117e-47 |
MsG0080048652.01 | MsG0180005369.01 | -0.829713 | 4.413432e-55 | 4.553844e-52 |
MsG0080048652.01 | MsG0180005757.01 | 0.833460 | 5.265390e-56 | 6.067571e-53 |
MsG0080048652.01 | MsG0180005817.01 | -0.807730 | 4.381909e-50 | 2.459346e-47 |
MsG0080048652.01 | MsG0180006191.01 | 0.838734 | 2.412326e-57 | 3.260317e-54 |
MsG0080048652.01 | MsG0280006316.01 | 0.814877 | 1.231578e-51 | 8.361851e-49 |
MsG0080048652.01 | MsG0280006381.01 | -0.807594 | 4.683367e-50 | 2.619011e-47 |
MsG0080048652.01 | MsG0280006485.01 | 0.843078 | 1.748238e-58 | 2.704007e-55 |
MsG0080048652.01 | MsG0280006725.01 | 0.820594 | 6.316172e-53 | 5.018856e-50 |
MsG0080048652.01 | MsG0280006884.01 | 0.821372 | 4.180589e-53 | 3.394882e-50 |
MsG0080048652.01 | MsG0280007233.01 | -0.801241 | 9.878209e-49 | 4.694294e-46 |
MsG0080048652.01 | MsG0280007288.01 | -0.814638 | 1.391195e-51 | 9.385641e-49 |
MsG0080048652.01 | MsG0280007291.01 | -0.816840 | 4.493590e-52 | 3.219390e-49 |
MsG0080048652.01 | MsG0280007653.01 | -0.819589 | 1.072592e-52 | 8.289088e-50 |
MsG0080048652.01 | MsG0280007678.01 | 0.807384 | 5.188627e-50 | 2.885977e-47 |
MsG0080048652.01 | MsG0280007759.01 | 0.814184 | 1.753405e-51 | 1.168451e-48 |
MsG0080048652.01 | MsG0280007760.01 | 0.801125 | 1.043758e-48 | 4.945546e-46 |
MsG0080048652.01 | MsG0280007786.01 | 0.858412 | 8.385428e-63 | 2.138308e-59 |
MsG0080048652.01 | MsG0280008226.01 | 0.834302 | 3.241866e-56 | 3.831707e-53 |
MsG0080048652.01 | MsG0280008328.01 | 0.823791 | 1.145110e-53 | 9.959520e-51 |
MsG0080048652.01 | MsG0280008407.01 | 0.868734 | 5.239248e-66 | 1.915958e-62 |
MsG0080048652.01 | MsG0280008495.01 | 0.853103 | 2.980290e-61 | 6.366907e-58 |
MsG0080048652.01 | MsG0280008553.01 | 0.822282 | 2.575353e-53 | 2.146059e-50 |
MsG0080048652.01 | MsG0280008659.01 | 0.813643 | 2.307089e-51 | 1.515047e-48 |
MsG0080048652.01 | MsG0280008820.01 | -0.804078 | 2.566692e-49 | 1.311258e-46 |
MsG0080048652.01 | MsG0280009241.01 | 0.800826 | 1.201376e-48 | 5.649081e-46 |
MsG0080048652.01 | MsG0280009526.01 | 0.800445 | 1.436189e-48 | 6.688557e-46 |
MsG0080048652.01 | MsG0280009742.01 | -0.819701 | 1.011557e-52 | 7.841605e-50 |
MsG0080048652.01 | MsG0280009864.01 | -0.808099 | 3.657265e-50 | 2.072581e-47 |
MsG0080048652.01 | MsG0280010142.01 | -0.835190 | 1.938138e-56 | 2.352554e-53 |
MsG0080048652.01 | MsG0280010143.01 | -0.805575 | 1.249512e-49 | 6.633786e-47 |
MsG0080048652.01 | MsG0280010296.01 | 0.836279 | 1.027356e-56 | 1.288702e-53 |
MsG0080048652.01 | MsG0280010303.01 | 0.854525 | 1.161791e-61 | 2.602226e-58 |
MsG0080048652.01 | MsG0280010463.01 | 0.808903 | 2.463238e-50 | 1.425644e-47 |
MsG0080048652.01 | MsG0280010617.01 | 0.820343 | 7.210944e-53 | 5.690695e-50 |
MsG0080048652.01 | MsG0280011016.01 | 0.808951 | 2.406653e-50 | 1.394674e-47 |
MsG0080048652.01 | MsG0280011267.01 | 0.811822 | 5.775325e-51 | 3.611434e-48 |
MsG0080048652.01 | MsG0280011399.01 | 0.830069 | 3.613370e-55 | 3.766382e-52 |
MsG0080048652.01 | MsG0380012900.01 | 0.812404 | 4.312849e-51 | 2.739855e-48 |
MsG0080048652.01 | MsG0380012913.01 | 0.840617 | 7.806207e-58 | 1.118073e-54 |
MsG0080048652.01 | MsG0380012918.01 | 0.841874 | 3.646329e-58 | 5.431234e-55 |
MsG0080048652.01 | MsG0380013063.01 | -0.804848 | 1.773871e-49 | 9.243986e-47 |
MsG0080048652.01 | MsG0380013118.01 | 0.811440 | 6.994069e-51 | 4.329796e-48 |
MsG0080048652.01 | MsG0380013219.01 | 0.825481 | 4.578816e-54 | 4.178453e-51 |
MsG0080048652.01 | MsG0380013226.01 | 0.841189 | 5.524993e-58 | 8.054990e-55 |
MsG0080048652.01 | MsG0380013272.01 | 0.801739 | 7.810638e-49 | 3.758418e-46 |
MsG0080048652.01 | MsG0380013405.01 | 0.828354 | 9.419709e-55 | 9.339785e-52 |
MsG0080048652.01 | MsG0380013415.01 | 0.859137 | 5.093126e-63 | 1.331096e-59 |
MsG0080048652.01 | MsG0380013891.01 | -0.810349 | 1.204762e-50 | 7.245051e-48 |
MsG0080048652.01 | MsG0380013892.01 | -0.836052 | 1.173245e-56 | 1.461475e-53 |
MsG0080048652.01 | MsG0380013928.01 | -0.827482 | 1.526947e-54 | 1.476042e-51 |
MsG0080048652.01 | MsG0380013984.01 | -0.802199 | 6.283459e-49 | 3.059113e-46 |
MsG0080048652.01 | MsG0380013986.01 | -0.858740 | 6.696034e-63 | 1.726470e-59 |
MsG0080048652.01 | MsG0380013997.01 | -0.835354 | 1.762396e-56 | 2.149894e-53 |
MsG0080048652.01 | MsG0380014016.01 | -0.838556 | 2.681343e-57 | 3.604345e-54 |
MsG0080048652.01 | MsG0380014029.01 | -0.829924 | 3.919538e-55 | 4.068883e-52 |
MsG0080048652.01 | MsG0380014410.01 | 0.859972 | 2.856390e-63 | 7.684114e-60 |
MsG0080048652.01 | MsG0380014642.01 | -0.811287 | 7.550347e-51 | 4.654971e-48 |
MsG0080048652.01 | MsG0380014734.01 | 0.834266 | 3.310783e-56 | 3.908943e-53 |
MsG0080048652.01 | MsG0380014735.01 | -0.814851 | 1.248262e-51 | 8.469338e-49 |
MsG0080048652.01 | MsG0380014754.01 | 0.810281 | 1.246168e-50 | 7.480396e-48 |
MsG0080048652.01 | MsG0380015115.01 | 0.811751 | 5.986846e-51 | 3.736598e-48 |
MsG0080048652.01 | MsG0380015691.01 | 0.802919 | 4.465014e-49 | 2.214148e-46 |
MsG0080048652.01 | MsG0380016110.01 | 0.810618 | 1.054100e-50 | 6.384536e-48 |
MsG0080048652.01 | MsG0380016372.01 | 0.803660 | 3.134894e-49 | 1.584324e-46 |
MsG0080048652.01 | MsG0380016456.01 | -0.808306 | 3.304115e-50 | 1.882720e-47 |
MsG0080048652.01 | MsG0380016476.01 | 0.832736 | 7.975598e-56 | 8.993832e-53 |
MsG0080048652.01 | MsG0380016524.01 | 0.810598 | 1.064716e-50 | 6.445355e-48 |
MsG0080048652.01 | MsG0380016931.01 | -0.813002 | 3.190776e-51 | 2.059190e-48 |
MsG0080048652.01 | MsG0380016934.01 | -0.818644 | 1.760240e-52 | 1.325059e-49 |
MsG0080048652.01 | MsG0380016935.01 | -0.832585 | 8.692661e-56 | 9.758817e-53 |
MsG0080048652.01 | MsG0380017102.01 | 0.808129 | 3.603549e-50 | 2.043794e-47 |
MsG0080048652.01 | MsG0380017231.01 | 0.888782 | 4.348714e-73 | 3.415524e-69 |
MsG0080048652.01 | MsG0380017405.01 | -0.800633 | 1.315087e-48 | 6.153843e-46 |
MsG0080048652.01 | MsG0380017898.01 | 0.819386 | 1.193434e-52 | 9.169957e-50 |
MsG0080048652.01 | MsG0380017989.01 | 0.823853 | 1.107554e-53 | 9.649410e-51 |
MsG0080048652.01 | MsG0380017992.01 | 0.834411 | 3.045244e-56 | 3.611064e-53 |
MsG0080048652.01 | MsG0480018299.01 | 0.801182 | 1.016051e-48 | 4.821039e-46 |
MsG0080048652.01 | MsG0480018440.01 | 0.812836 | 3.470017e-51 | 2.229337e-48 |
MsG0080048652.01 | MsG0480018965.01 | 0.832169 | 1.101782e-55 | 1.221644e-52 |
MsG0080048652.01 | MsG0480019028.01 | -0.850889 | 1.267766e-60 | 2.520286e-57 |
MsG0080048652.01 | MsG0480019588.01 | 0.821409 | 4.100233e-53 | 3.332992e-50 |
MsG0080048652.01 | MsG0480019635.01 | 0.805682 | 1.186277e-49 | 6.315831e-47 |
MsG0080048652.01 | MsG0480019666.01 | 0.844589 | 6.884776e-59 | 1.116791e-55 |
MsG0080048652.01 | MsG0480019726.01 | 0.819275 | 1.265200e-52 | 9.691601e-50 |
MsG0080048652.01 | MsG0480020051.01 | -0.823140 | 1.626020e-53 | 1.388426e-50 |
MsG0080048652.01 | MsG0480020722.01 | 0.845394 | 4.174813e-59 | 6.947267e-56 |
MsG0080048652.01 | MsG0480020814.01 | 0.832930 | 7.137883e-56 | 8.095914e-53 |
MsG0080048652.01 | MsG0480021129.01 | 0.801430 | 9.036337e-49 | 4.314583e-46 |
MsG0080048652.01 | MsG0480021600.01 | 0.802948 | 4.403465e-49 | 2.185148e-46 |
MsG0080048652.01 | MsG0480021604.01 | 0.827785 | 1.291188e-54 | 1.259096e-51 |
MsG0080048652.01 | MsG0480021972.01 | 0.826545 | 2.557619e-54 | 2.405831e-51 |
MsG0080048652.01 | MsG0480022459.01 | -0.802285 | 6.031924e-49 | 2.943368e-46 |
MsG0080048652.01 | MsG0480022889.01 | 0.807488 | 4.932165e-50 | 2.750748e-47 |
MsG0080048652.01 | MsG0480023094.01 | 0.800531 | 1.379744e-48 | 6.439515e-46 |
MsG0080048652.01 | MsG0480023103.01 | -0.805630 | 1.216491e-49 | 6.467813e-47 |
MsG0080048652.01 | MsG0480023195.01 | 0.950986 | 5.279955e-109 | 1.166924e-103 |
MsG0080048652.01 | MsG0480023322.01 | 0.880412 | 5.606131e-70 | 3.155752e-66 |
MsG0080048652.01 | MsG0480023429.01 | 0.826891 | 2.115419e-54 | 2.009856e-51 |
MsG0080048652.01 | MsG0480023532.01 | 0.812728 | 3.663337e-51 | 2.347118e-48 |
MsG0080048652.01 | MsG0480023858.01 | 0.802456 | 5.562690e-49 | 2.726151e-46 |
MsG0080048652.01 | MsG0480023944.01 | 0.802394 | 5.727992e-49 | 2.802841e-46 |
MsG0080048652.01 | MsG0580024442.01 | -0.802152 | 6.424332e-49 | 3.124148e-46 |
MsG0080048652.01 | MsG0580024493.01 | -0.802928 | 4.444310e-49 | 2.204381e-46 |
MsG0080048652.01 | MsG0580025023.01 | 0.851055 | 1.138474e-60 | 2.275593e-57 |
MsG0080048652.01 | MsG0580025105.01 | -0.816115 | 6.532015e-52 | 4.587854e-49 |
MsG0080048652.01 | MsG0580025117.01 | 0.881713 | 1.909679e-70 | 1.130892e-66 |
MsG0080048652.01 | MsG0580025443.01 | 0.812397 | 4.327258e-51 | 2.748498e-48 |
MsG0080048652.01 | MsG0580025444.01 | 0.810365 | 1.194973e-50 | 7.189309e-48 |
MsG0080048652.01 | MsG0580025486.01 | -0.814221 | 1.720235e-51 | 1.147460e-48 |
MsG0080048652.01 | MsG0580025822.01 | 0.859332 | 4.449301e-63 | 1.170871e-59 |
MsG0080048652.01 | MsG0580026162.01 | 0.800648 | 1.305652e-48 | 6.112120e-46 |
MsG0080048652.01 | MsG0580026311.01 | 0.811782 | 5.893462e-51 | 3.681353e-48 |
MsG0080048652.01 | MsG0580026449.01 | 0.832768 | 7.828966e-56 | 8.837085e-53 |
MsG0080048652.01 | MsG0580027036.01 | 0.850174 | 2.014265e-60 | 3.911542e-57 |
MsG0080048652.01 | MsG0580027276.01 | -0.807534 | 4.823841e-50 | 2.693489e-47 |
MsG0080048652.01 | MsG0580027641.01 | 0.865830 | 4.443565e-65 | 1.465845e-61 |
MsG0080048652.01 | MsG0580028023.01 | 0.833702 | 4.582015e-56 | 5.318189e-53 |
MsG0080048652.01 | MsG0580028302.01 | 0.836230 | 1.056720e-56 | 1.323659e-53 |
MsG0080048652.01 | MsG0580028565.01 | 0.834704 | 2.569140e-56 | 3.072820e-53 |
MsG0080048652.01 | MsG0580028924.01 | 0.834176 | 3.487891e-56 | 4.106132e-53 |
MsG0080048652.01 | MsG0580029177.01 | -0.811046 | 8.516218e-51 | 5.217497e-48 |
MsG0080048652.01 | MsG0580029518.01 | 0.800451 | 1.432585e-48 | 6.672623e-46 |
MsG0080048652.01 | MsG0580029623.01 | 0.832688 | 8.194562e-56 | 9.227802e-53 |
MsG0080048652.01 | MsG0580029792.01 | -0.824656 | 7.170055e-54 | 6.391768e-51 |
MsG0080048652.01 | MsG0580030179.01 | 0.800913 | 1.152911e-48 | 5.433640e-46 |
MsG0080048652.01 | MsG0680030545.01 | 0.830099 | 3.553040e-55 | 3.706771e-52 |
MsG0080048652.01 | MsG0680030635.01 | -0.819147 | 1.353180e-52 | 1.032869e-49 |
MsG0080048652.01 | MsG0680030658.01 | -0.819145 | 1.354074e-52 | 1.033512e-49 |
MsG0080048652.01 | MsG0680030762.01 | 0.801554 | 8.523839e-49 | 4.082574e-46 |
MsG0080048652.01 | MsG0680030960.01 | 0.803383 | 3.579251e-49 | 1.796041e-46 |
MsG0080048652.01 | MsG0680030961.01 | 0.858685 | 6.950395e-63 | 1.788702e-59 |
MsG0080048652.01 | MsG0680031178.01 | 0.824122 | 9.575054e-54 | 8.405128e-51 |
MsG0080048652.01 | MsG0680031841.01 | 0.854812 | 9.590270e-62 | 2.168783e-58 |
MsG0080048652.01 | MsG0680032343.01 | 0.829565 | 4.794864e-55 | 4.925388e-52 |
MsG0080048652.01 | MsG0680034978.01 | 0.800277 | 1.554087e-48 | 7.206910e-46 |
MsG0080048652.01 | MsG0680035349.01 | 0.816746 | 4.718317e-52 | 3.371553e-49 |
MsG0080048652.01 | MsG0680035464.01 | 0.818057 | 2.390715e-52 | 1.770794e-49 |
MsG0080048652.01 | MsG0680035870.01 | -0.828592 | 8.253604e-55 | 8.240325e-52 |
MsG0080048652.01 | MsG0780036370.01 | 0.810953 | 8.917435e-51 | 5.450347e-48 |
MsG0080048652.01 | MsG0780036890.01 | 0.823741 | 1.176451e-53 | 1.021811e-50 |
MsG0080048652.01 | MsG0780037751.01 | 0.854583 | 1.117780e-61 | 2.508401e-58 |
MsG0080048652.01 | MsG0780037982.01 | -0.818917 | 1.525802e-52 | 1.157455e-49 |
MsG0080048652.01 | MsG0780038305.01 | 0.805934 | 1.050320e-49 | 5.628104e-47 |
MsG0080048652.01 | MsG0780038307.01 | 0.823491 | 1.345882e-53 | 1.160636e-50 |
MsG0080048652.01 | MsG0780038810.01 | 0.875403 | 3.167579e-68 | 1.476889e-64 |
MsG0080048652.01 | MsG0780038823.01 | 0.811225 | 7.785392e-51 | 4.792263e-48 |
MsG0080048652.01 | MsG0780038983.01 | 0.826527 | 2.583219e-54 | 2.428649e-51 |
MsG0080048652.01 | MsG0780038985.01 | 0.830908 | 2.253051e-55 | 2.406972e-52 |
MsG0080048652.01 | MsG0780039431.01 | 0.808312 | 3.294424e-50 | 1.877497e-47 |
MsG0080048652.01 | MsG0780039642.01 | 0.803189 | 3.925133e-49 | 1.959931e-46 |
MsG0080048652.01 | MsG0780039773.01 | 0.805285 | 1.436892e-49 | 7.572001e-47 |
MsG0080048652.01 | MsG0780039821.01 | -0.805929 | 1.052918e-49 | 5.641269e-47 |
MsG0080048652.01 | MsG0780039916.01 | 0.883415 | 4.574159e-71 | 2.896730e-67 |
MsG0080048652.01 | MsG0780039917.01 | 0.841599 | 4.309569e-58 | 6.364513e-55 |
MsG0080048652.01 | MsG0780039918.01 | 0.846868 | 1.657653e-59 | 2.892797e-56 |
MsG0080048652.01 | MsG0780039923.01 | 0.843625 | 1.248702e-58 | 1.965452e-55 |
MsG0080048652.01 | MsG0780039924.01 | 0.824624 | 7.296812e-54 | 6.498954e-51 |
MsG0080048652.01 | MsG0780040574.01 | 0.817943 | 2.536250e-52 | 1.872749e-49 |
MsG0080048652.01 | MsG0780040685.01 | -0.804235 | 2.381598e-49 | 1.221492e-46 |
MsG0080048652.01 | MsG0780040799.01 | 0.809164 | 2.166119e-50 | 1.262551e-47 |
MsG0080048652.01 | MsG0780040878.01 | 0.872861 | 2.296996e-67 | 9.760366e-64 |
MsG0080048652.01 | MsG0780040977.01 | 0.806422 | 8.289704e-50 | 4.497506e-47 |
MsG0080048652.01 | MsG0780041079.01 | 0.838005 | 3.717814e-57 | 4.914737e-54 |
MsG0080048652.01 | MsG0780041100.01 | 0.872246 | 3.684253e-67 | 1.530814e-63 |
MsG0080048652.01 | MsG0780041118.01 | 0.809922 | 1.489052e-50 | 8.855518e-48 |
MsG0080048652.01 | MsG0780041180.01 | 0.838318 | 3.088631e-57 | 4.121357e-54 |
MsG0080048652.01 | MsG0780041225.01 | 0.813455 | 2.537047e-51 | 1.657694e-48 |
MsG0080048652.01 | MsG0780041271.01 | 0.824167 | 9.346813e-54 | 8.215332e-51 |
MsG0080048652.01 | MsG0780041531.01 | -0.821373 | 4.180035e-53 | 3.394456e-50 |
MsG0080048652.01 | MsG0780041720.01 | -0.800942 | 1.137521e-48 | 5.364962e-46 |
MsG0080048652.01 | MsG0780041783.01 | -0.813788 | 2.144055e-51 | 1.413485e-48 |
MsG0080048652.01 | MsG0880042122.01 | 0.847363 | 1.212473e-59 | 2.149886e-56 |
MsG0080048652.01 | MsG0880042433.01 | 0.821006 | 5.078499e-53 | 4.082788e-50 |
MsG0080048652.01 | MsG0880042541.01 | 0.816457 | 5.475896e-52 | 3.881928e-49 |
MsG0080048652.01 | MsG0880042635.01 | 0.813822 | 2.107018e-51 | 1.390354e-48 |
MsG0080048652.01 | MsG0880042644.01 | 0.802910 | 4.482369e-49 | 2.222320e-46 |
MsG0080048652.01 | MsG0880043261.01 | 0.880745 | 4.262903e-70 | 2.432077e-66 |
MsG0080048652.01 | MsG0880043550.01 | 0.803285 | 3.750273e-49 | 1.877134e-46 |
MsG0080048652.01 | MsG0880043551.01 | 0.835590 | 1.536127e-56 | 1.886931e-53 |
MsG0080048652.01 | MsG0880043948.01 | 0.885489 | 7.781153e-72 | 5.351058e-68 |
MsG0080048652.01 | MsG0880043961.01 | 0.873056 | 1.976521e-67 | 8.460321e-64 |
MsG0080048652.01 | MsG0880043983.01 | 0.907955 | 2.892882e-81 | 5.252131e-77 |
MsG0080048652.01 | MsG0880043989.01 | 0.878981 | 1.807849e-69 | 9.633824e-66 |
MsG0080048652.01 | MsG0880044688.01 | 0.848316 | 6.625327e-60 | 1.211028e-56 |
MsG0080048652.01 | MsG0880044984.01 | 0.815216 | 1.035494e-51 | 7.095401e-49 |
MsG0080048652.01 | MsG0880045385.01 | -0.803760 | 2.989540e-49 | 1.514811e-46 |
MsG0080048652.01 | MsG0880045703.01 | -0.819685 | 1.020305e-52 | 7.905494e-50 |
MsG0080048652.01 | MsG0880045790.01 | 0.831126 | 1.991387e-55 | 2.141119e-52 |
MsG0080048652.01 | MsG0880045802.01 | 0.809829 | 1.559703e-50 | 9.252846e-48 |
MsG0080048652.01 | MsG0880045804.01 | 0.849256 | 3.633173e-60 | 6.848061e-57 |
MsG0080048652.01 | MsG0880045854.01 | 0.824499 | 7.807932e-54 | 6.928054e-51 |
MsG0080048652.01 | MsG0880045856.01 | 0.837740 | 4.348938e-57 | 5.702705e-54 |
MsG0080048652.01 | MsG0880045960.01 | 0.801610 | 8.301795e-49 | 3.981725e-46 |
MsG0080048652.01 | MsG0880045968.01 | -0.801904 | 7.224438e-49 | 3.491128e-46 |
MsG0080048652.01 | MsG0880046174.01 | -0.843515 | 1.336279e-58 | 2.095805e-55 |
MsG0080048652.01 | MsG0880046402.01 | 0.802893 | 4.519328e-49 | 2.239627e-46 |
MsG0080048652.01 | MsG0880046463.01 | 0.854554 | 1.139043e-61 | 2.553555e-58 |
MsG0080048652.01 | MsG0880046693.01 | 0.837243 | 5.830494e-57 | 7.527837e-54 |
MsG0080048652.01 | MsG0880046838.01 | -0.831989 | 1.220775e-55 | 1.346636e-52 |
MsG0080048652.01 | MsG0880046932.01 | 0.819214 | 1.305965e-52 | 9.987443e-50 |
MsG0080048652.01 | MsG0880046945.01 | 0.805535 | 1.273723e-49 | 6.755369e-47 |
MsG0080048652.01 | MsG0880047450.01 | 0.815331 | 9.765302e-52 | 6.713068e-49 |
MsG0080048652.01 | MsG0880047493.01 | 0.823633 | 1.247186e-53 | 1.079850e-50 |
MsG0080048652.01 | MsG0880047714.01 | 0.838906 | 2.176735e-57 | 2.957237e-54 |
MsG0080048652.01 | MsG0880047720.01 | 0.815004 | 1.154245e-51 | 7.864335e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048652.01.T01 | MTR_8g088860 | 83.008 | 359 | 15 | 2 | 1 | 313 | 1 | 359 | 0.0 | 574 |
MsG0080048652.01.T01 | MTR_8g088880 | 74.022 | 358 | 48 | 1 | 1 | 313 | 1 | 358 | 0.0 | 507 |
MsG0080048652.01.T01 | MTR_8g088890 | 62.752 | 298 | 66 | 1 | 31 | 283 | 3 | 300 | 2.80e-124 | 358 |
MsG0080048652.01.T01 | MTR_4g062570 | 38.764 | 356 | 171 | 3 | 1 | 311 | 1 | 354 | 1.08e-90 | 274 |
MsG0080048652.01.T01 | MTR_4g072780 | 38.483 | 356 | 172 | 3 | 1 | 311 | 1 | 354 | 1.32e-89 | 271 |
MsG0080048652.01.T01 | MTR_4g032360 | 38.483 | 356 | 172 | 3 | 1 | 311 | 1 | 354 | 1.68e-89 | 271 |
MsG0080048652.01.T01 | MTR_4g062550 | 38.202 | 356 | 173 | 3 | 1 | 311 | 1 | 354 | 4.55e-89 | 270 |
MsG0080048652.01.T01 | MTR_5g022720 | 42.857 | 147 | 61 | 1 | 157 | 303 | 140 | 263 | 8.58e-33 | 122 |
MsG0080048652.01.T01 | MTR_4g076710 | 76.744 | 43 | 10 | 0 | 73 | 115 | 1 | 43 | 8.10e-18 | 76.3 |
MsG0080048652.01.T02 | MTR_8g088860 | 83.008 | 359 | 15 | 2 | 1 | 313 | 1 | 359 | 0.0 | 574 |
MsG0080048652.01.T02 | MTR_8g088880 | 74.022 | 358 | 48 | 1 | 1 | 313 | 1 | 358 | 0.0 | 507 |
MsG0080048652.01.T02 | MTR_8g088890 | 62.752 | 298 | 66 | 1 | 31 | 283 | 3 | 300 | 2.80e-124 | 358 |
MsG0080048652.01.T02 | MTR_4g062570 | 38.764 | 356 | 171 | 3 | 1 | 311 | 1 | 354 | 1.08e-90 | 274 |
MsG0080048652.01.T02 | MTR_4g072780 | 38.483 | 356 | 172 | 3 | 1 | 311 | 1 | 354 | 1.32e-89 | 271 |
MsG0080048652.01.T02 | MTR_4g032360 | 38.483 | 356 | 172 | 3 | 1 | 311 | 1 | 354 | 1.68e-89 | 271 |
MsG0080048652.01.T02 | MTR_4g062550 | 38.202 | 356 | 173 | 3 | 1 | 311 | 1 | 354 | 4.55e-89 | 270 |
MsG0080048652.01.T02 | MTR_5g022720 | 42.857 | 147 | 61 | 1 | 157 | 303 | 140 | 263 | 8.58e-33 | 122 |
MsG0080048652.01.T02 | MTR_4g076710 | 76.744 | 43 | 10 | 0 | 73 | 115 | 1 | 43 | 8.10e-18 | 76.3 |
MsG0080048652.01.T03 | MTR_8g088860 | 83.008 | 359 | 15 | 2 | 1 | 313 | 1 | 359 | 0.0 | 574 |
MsG0080048652.01.T03 | MTR_8g088880 | 74.022 | 358 | 48 | 1 | 1 | 313 | 1 | 358 | 0.0 | 507 |
MsG0080048652.01.T03 | MTR_8g088890 | 62.752 | 298 | 66 | 1 | 31 | 283 | 3 | 300 | 2.80e-124 | 358 |
MsG0080048652.01.T03 | MTR_4g062570 | 38.764 | 356 | 171 | 3 | 1 | 311 | 1 | 354 | 1.08e-90 | 274 |
MsG0080048652.01.T03 | MTR_4g072780 | 38.483 | 356 | 172 | 3 | 1 | 311 | 1 | 354 | 1.32e-89 | 271 |
MsG0080048652.01.T03 | MTR_4g032360 | 38.483 | 356 | 172 | 3 | 1 | 311 | 1 | 354 | 1.68e-89 | 271 |
MsG0080048652.01.T03 | MTR_4g062550 | 38.202 | 356 | 173 | 3 | 1 | 311 | 1 | 354 | 4.55e-89 | 270 |
MsG0080048652.01.T03 | MTR_5g022720 | 42.857 | 147 | 61 | 1 | 157 | 303 | 140 | 263 | 8.58e-33 | 122 |
MsG0080048652.01.T03 | MTR_4g076710 | 76.744 | 43 | 10 | 0 | 73 | 115 | 1 | 43 | 8.10e-18 | 76.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048652.01.T01 | AT2G28680 | 36.415 | 357 | 180 | 3 | 1 | 312 | 1 | 355 | 1.90e-80 | 248 |
MsG0080048652.01.T01 | AT1G07750 | 36.338 | 355 | 177 | 4 | 1 | 310 | 1 | 351 | 4.92e-80 | 247 |
MsG0080048652.01.T01 | AT4G28520 | 27.572 | 243 | 153 | 5 | 83 | 306 | 196 | 434 | 5.23e-16 | 78.6 |
MsG0080048652.01.T01 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 123 | 267 | 4.15e-13 | 68.9 |
MsG0080048652.01.T01 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 206 | 350 | 9.55e-13 | 68.6 |
MsG0080048652.01.T01 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 310 | 454 | 1.07e-12 | 68.9 |
MsG0080048652.01.T01 | AT4G28520 | 30.612 | 147 | 101 | 1 | 160 | 306 | 360 | 505 | 1.18e-12 | 68.6 |
MsG0080048652.01.T01 | AT1G03890 | 28.947 | 152 | 107 | 1 | 161 | 312 | 298 | 448 | 5.17e-12 | 66.6 |
MsG0080048652.01.T02 | AT2G28680 | 36.415 | 357 | 180 | 3 | 1 | 312 | 1 | 355 | 1.90e-80 | 248 |
MsG0080048652.01.T02 | AT1G07750 | 36.338 | 355 | 177 | 4 | 1 | 310 | 1 | 351 | 4.92e-80 | 247 |
MsG0080048652.01.T02 | AT4G28520 | 27.572 | 243 | 153 | 5 | 83 | 306 | 196 | 434 | 5.23e-16 | 78.6 |
MsG0080048652.01.T02 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 123 | 267 | 4.15e-13 | 68.9 |
MsG0080048652.01.T02 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 206 | 350 | 9.55e-13 | 68.6 |
MsG0080048652.01.T02 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 310 | 454 | 1.07e-12 | 68.9 |
MsG0080048652.01.T02 | AT4G28520 | 30.612 | 147 | 101 | 1 | 160 | 306 | 360 | 505 | 1.18e-12 | 68.6 |
MsG0080048652.01.T02 | AT1G03890 | 28.947 | 152 | 107 | 1 | 161 | 312 | 298 | 448 | 5.17e-12 | 66.6 |
MsG0080048652.01.T03 | AT2G28680 | 36.415 | 357 | 180 | 3 | 1 | 312 | 1 | 355 | 1.90e-80 | 248 |
MsG0080048652.01.T03 | AT1G07750 | 36.338 | 355 | 177 | 4 | 1 | 310 | 1 | 351 | 4.92e-80 | 247 |
MsG0080048652.01.T03 | AT4G28520 | 27.572 | 243 | 153 | 5 | 83 | 306 | 196 | 434 | 5.23e-16 | 78.6 |
MsG0080048652.01.T03 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 123 | 267 | 4.15e-13 | 68.9 |
MsG0080048652.01.T03 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 206 | 350 | 9.55e-13 | 68.6 |
MsG0080048652.01.T03 | AT5G44120 | 32.653 | 147 | 96 | 2 | 161 | 306 | 310 | 454 | 1.07e-12 | 68.9 |
MsG0080048652.01.T03 | AT4G28520 | 30.612 | 147 | 101 | 1 | 160 | 306 | 360 | 505 | 1.18e-12 | 68.6 |
MsG0080048652.01.T03 | AT1G03890 | 28.947 | 152 | 107 | 1 | 161 | 312 | 298 | 448 | 5.17e-12 | 66.6 |
Find 35 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCACTCATAAGAAATTTAT+TGG | 0.149911 | contig392end:-8469 | None:intergenic |
CGATAATTAAAATTTATTAA+TGG | 0.209904 | contig392end:-8616 | None:intergenic |
TGTATGGAATTCATGTAATA+AGG | 0.302209 | contig392end:+8509 | MsG0080048652.01.T01:three_prime_UTR |
TATAAACAAGTCAAACTAAA+TGG | 0.330642 | contig392end:-8057 | None:intergenic |
ATACAACTCTACCGACCATT+TGG | 0.355393 | contig392end:-8573 | None:intergenic |
CCACTCATAAGAAATTTATT+GGG | 0.391366 | contig392end:-8468 | None:intergenic |
CCAAAGTAGGTCAATTAAAC+CGG | 0.395853 | contig392end:-8097 | None:intergenic |
CCCAATAAATTTCTTATGAG+TGG | 0.423152 | contig392end:+8468 | MsG0080048652.01.T01:intron |
CCGGTTTAATTGACCTACTT+TGG | 0.427732 | contig392end:+8097 | MsG0080048652.01.T01:intron |
TAGCCGGAGAGACATCAGTA+TGG | 0.435918 | contig392end:+7928 | MsG0080048652.01.T01:CDS |
ATTAATAAACCCTTCCCAAA+TGG | 0.437112 | contig392end:+8558 | MsG0080048652.01.T01:three_prime_UTR |
TACAACTCTACCGACCATTT+GGG | 0.465051 | contig392end:-8572 | None:intergenic |
TAGTAGTACTCCCTCCGTCC+CGG | 0.505044 | contig392end:+8078 | MsG0080048652.01.T01:intron |
GTCAATTAAACCGGGACGGA+GGG | 0.522206 | contig392end:-8088 | None:intergenic |
GAGAATAAGCCTCTCATGGT+TGG | 0.528668 | contig392end:-8703 | None:intergenic |
AGCCGGAGAGACATCAGTAT+GGG | 0.531399 | contig392end:+7929 | MsG0080048652.01.T01:CDS |
AACAAGTCAAACTAAATGGT+AGG | 0.531603 | contig392end:-8053 | None:intergenic |
AAAGACACTTGTTGCACAGT+AGG | 0.532747 | contig392end:-7963 | None:intergenic |
CTCTACCGACCATTTGGGAA+GGG | 0.556012 | contig392end:-8567 | None:intergenic |
CCTTTGTTTGAAGAGTTAGC+CGG | 0.556322 | contig392end:+7912 | MsG0080048652.01.T01:CDS |
CATAGAGAATAAGCCTCTCA+TGG | 0.562142 | contig392end:-8707 | None:intergenic |
TCCCCATACTGATGTCTCTC+CGG | 0.565683 | contig392end:-7931 | None:intergenic |
ACAAGTCAAACTAAATGGTA+GGG | 0.575189 | contig392end:-8052 | None:intergenic |
CAAAGTAGGTCAATTAAACC+GGG | 0.622247 | contig392end:-8096 | None:intergenic |
CATGGACATCCAACCATGAG+AGG | 0.623434 | contig392end:+8694 | MsG0080048652.01.T02:three_prime_UTR |
GGTAGGGAGAATGAGACTTG+TGG | 0.625569 | contig392end:-8036 | None:intergenic |
ACTCTACCGACCATTTGGGA+AGG | 0.630387 | contig392end:-8568 | None:intergenic |
GGTCAATTAAACCGGGACGG+AGG | 0.631337 | contig392end:-8089 | None:intergenic |
ATGTGAATTGTGAAACGACA+TGG | 0.633456 | contig392end:+8676 | MsG0080048652.01.T02:three_prime_UTR |
CCGGCTAACTCTTCAAACAA+AGG | 0.634501 | contig392end:-7912 | None:intergenic |
ATAAACCCTTCCCAAATGGT+CGG | 0.634525 | contig392end:+8562 | MsG0080048652.01.T01:three_prime_UTR |
GTAGGTCAATTAAACCGGGA+CGG | 0.643102 | contig392end:-8092 | None:intergenic |
TGTATGTCATGATGTTACAC+AGG | 0.654240 | contig392end:+8591 | MsG0080048652.01.T01:three_prime_UTR |
TTGTTGCACAGTAGGTGACA+AGG | 0.665977 | contig392end:-7955 | None:intergenic |
GCCGGAGAGACATCAGTATG+GGG | 0.687095 | contig392end:+7930 | MsG0080048652.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CGATAATTAAAATTTATTAA+TGG | - | contig392end:8619-8638 | None:intergenic | 10.0% |
!!! | AATTAATTTGTAAATTGAAA+TGG | + | contig392end:6437-6456 | MsG0080048652.01.T01:five_prime_UTR | 10.0% |
!!! | TTTTTTTTATTGAATATGTA+TGG | + | contig392end:8493-8512 | MsG0080048652.01.T01:intron | 10.0% |
!! | AAAGTAGAATATATTGTATT+GGG | + | contig392end:8159-8178 | MsG0080048652.01.T01:intron | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | + | contig392end:8200-8219 | MsG0080048652.01.T01:intron | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | + | contig392end:8199-8218 | MsG0080048652.01.T01:intron | 15.0% |
!!! | AAGAAAAGTGTATAAATAAA+GGG | + | contig392end:8135-8154 | MsG0080048652.01.T01:intron | 15.0% |
!!! | ATAAGCAAAATTCATTTTTT+AGG | - | contig392end:8425-8444 | None:intergenic | 15.0% |
!!! | ATACAATTTTAATAAAGATG+AGG | + | contig392end:7178-7197 | MsG0080048652.01.T01:CDS | 15.0% |
!!! | ATTTGAAATTATTTTCGATT+TGG | + | contig392end:7825-7844 | MsG0080048652.01.T01:intron | 15.0% |
!!! | ATTTTGCTTATATTTTGAAA+CGG | + | contig392end:8434-8453 | MsG0080048652.01.T01:intron | 15.0% |
!!! | ATTTTGCTTATATTTTGAAA+CGG | - | contig392end:8453-8434 | None:intergenic | 15.0% |
!!! | TAAAGATTTTCCTTTTATTA+AGG | + | contig392end:7369-7388 | MsG0080048652.01.T01:CDS | 15.0% |
!!! | TAAGAAAAGTGTATAAATAA+AGG | + | contig392end:8134-8153 | MsG0080048652.01.T01:intron | 15.0% |
!! | AGAAGAAGTTTAATCAAATA+TGG | + | contig392end:6479-6498 | MsG0080048652.01.T01:intron | 20.0% |
!! | AGTTTAATCAAATATGGATT+TGG | + | contig392end:6485-6504 | MsG0080048652.01.T01:intron | 20.0% |
!! | CATTCATTTAATGATGTATA+TGG | + | contig392end:8361-8380 | MsG0080048652.01.T01:intron | 20.0% |
!! | GAAAGTAGAATATATTGTAT+TGG | + | contig392end:8158-8177 | MsG0080048652.01.T01:intron | 20.0% |
!! | GATCTTAACATTATATTTCT+TGG | + | contig392end:7053-7072 | MsG0080048652.01.T01:CDS | 20.0% |
!! | TATAAACAAGTCAAACTAAA+TGG | - | contig392end:8060-8079 | None:intergenic | 20.0% |
!! | TGAATGAAAATTGAATTCTT+CGG | - | contig392end:7760-7779 | None:intergenic | 20.0% |
!! | TTAGCAAAAACAAAAAAATG+TGG | - | contig392end:7580-7599 | None:intergenic | 20.0% |
!!! | AGAAAAGTGTATAAATAAAG+GGG | + | contig392end:8136-8155 | MsG0080048652.01.T01:intron | 20.0% |
!!! | ATAAGCAAAATTCACTTTTT+AGG | + | contig392end:8336-8355 | MsG0080048652.01.T01:intron | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+AGG | + | contig392end:8269-8288 | MsG0080048652.01.T01:intron | 20.0% |
!!! | TAAATTGAAATGGTTTTTTC+AGG | + | contig392end:6447-6466 | MsG0080048652.01.T01:five_prime_UTR | 20.0% |
!!! | TTTTGATTCACAAATCAATT+TGG | + | contig392end:7791-7810 | MsG0080048652.01.T01:intron | 20.0% |
! | AAAAAATAAGTGAATTCTCC+TGG | - | contig392end:7101-7120 | None:intergenic | 25.0% |
! | AAGTGGAAAAATAGAAATTG+TGG | + | contig392end:7495-7514 | MsG0080048652.01.T01:CDS | 25.0% |
! | AGTGGAAAAATAGAAATTGT+GGG | + | contig392end:7496-7515 | MsG0080048652.01.T01:CDS | 25.0% |
! | ATCACTTATTTGGTCAAATT+TGG | + | contig392end:6893-6912 | MsG0080048652.01.T01:intron | 25.0% |
! | CATAAACAAAGTCTTTAGTT+AGG | - | contig392end:7285-7304 | None:intergenic | 25.0% |
! | CATTCATTTAATGATGAATG+TGG | - | contig392end:8400-8419 | None:intergenic | 25.0% |
! | CCACTCATAAGAAATTTATT+GGG | - | contig392end:8471-8490 | None:intergenic | 25.0% |
! | GTGATAATCAAGTTAGAAAA+AGG | + | contig392end:7232-7251 | MsG0080048652.01.T01:intron | 25.0% |
! | TCCACTCATAAGAAATTTAT+TGG | - | contig392end:8472-8491 | None:intergenic | 25.0% |
! | TGCTAAAACACCATATATTA+AGG | + | contig392end:7312-7331 | MsG0080048652.01.T01:intron | 25.0% |
! | TGTATGGAATTCATGTAATA+AGG | + | contig392end:8509-8528 | MsG0080048652.01.T01:three_prime_UTR | 25.0% |
! | TTATCTAAATGATGATCTCT+TGG | + | contig392end:6737-6756 | MsG0080048652.01.T01:intron | 25.0% |
!! | TTCCTTTTATTAAGGATGTT+GGG | + | contig392end:7377-7396 | MsG0080048652.01.T01:CDS | 25.0% |
!! | TTGAAATGAGTCAGTTATTT+TGG | + | contig392end:8246-8265 | MsG0080048652.01.T01:intron | 25.0% |
!! | TTTCCTTTTATTAAGGATGT+TGG | + | contig392end:7376-7395 | MsG0080048652.01.T01:CDS | 25.0% |
!!! | TGAAATGAGTCAGTTATTTT+GGG | + | contig392end:8247-8266 | MsG0080048652.01.T01:intron | 25.0% |
!!! | TTCACTTATTTTTTCCTAAG+TGG | + | contig392end:7107-7126 | MsG0080048652.01.T01:CDS | 25.0% |
AACAAGTCAAACTAAATGGT+AGG | - | contig392end:8056-8075 | None:intergenic | 30.0% | |
AACCCAACATCCTTAATAAA+AGG | - | contig392end:7382-7401 | None:intergenic | 30.0% | |
ACAAGTCAAACTAAATGGTA+GGG | - | contig392end:8055-8074 | None:intergenic | 30.0% | |
ACTTGAACCTAATGCTATTA+AGG | + | contig392end:7420-7439 | MsG0080048652.01.T01:CDS | 30.0% | |
AGAAAATAGGTCAGTTATTC+CGG | + | contig392end:8282-8301 | MsG0080048652.01.T01:intron | 30.0% | |
AGGAAAATCTTTATCCGTTA+AGG | - | contig392end:7362-7381 | None:intergenic | 30.0% | |
ATAGAAATTGTGGGATTGAA+TGG | + | contig392end:7505-7524 | MsG0080048652.01.T01:CDS | 30.0% | |
ATATATTAAGGCCCAAAATG+TGG | + | contig392end:7324-7343 | MsG0080048652.01.T01:intron | 30.0% | |
ATTAATAAACCCTTCCCAAA+TGG | + | contig392end:8558-8577 | MsG0080048652.01.T01:three_prime_UTR | 30.0% | |
CCCAATAAATTTCTTATGAG+TGG | + | contig392end:8468-8487 | MsG0080048652.01.T01:intron | 30.0% | |
GATGAATGTGGTTCATAATA+TGG | - | contig392end:8388-8407 | None:intergenic | 30.0% | |
GTATCACAACATCACTTATT+TGG | + | contig392end:6883-6902 | MsG0080048652.01.T01:intron | 30.0% | |
TATATTAAGGCCCAAAATGT+GGG | + | contig392end:7325-7344 | MsG0080048652.01.T01:intron | 30.0% | |
! | ACATTTTGGGCCTTAATATA+TGG | - | contig392end:7325-7344 | None:intergenic | 30.0% |
! | GTTTAAAACTCCAACTTACT+TGG | - | contig392end:7650-7669 | None:intergenic | 30.0% |
!! | AAGTTCTCAAGTTCAAGTTT+TGG | + | contig392end:6572-6591 | MsG0080048652.01.T01:CDS | 30.0% |
!!! | GTTGTTTTGAAGCTTAAGAA+AGG | + | contig392end:6972-6991 | MsG0080048652.01.T01:CDS | 30.0% |
!!! | TGCTTATATTTTGAAACGGA+GGG | + | contig392end:8438-8457 | MsG0080048652.01.T01:intron | 30.0% |
!!! | TGCTTATATTTTGAAACGGA+GGG | - | contig392end:8457-8438 | None:intergenic | 30.0% |
!!! | TTGCTTATATTTTGAAACGG+AGG | + | contig392end:8437-8456 | MsG0080048652.01.T01:intron | 30.0% |
!!! | TTGCTTATATTTTGAAACGG+AGG | - | contig392end:8456-8437 | None:intergenic | 30.0% |
!!! | TTTGTTTTTGCTAAAGTTGC+TGG | + | contig392end:7586-7605 | MsG0080048652.01.T01:CDS | 30.0% |
AAGCTAACACAAAGCCAAAA+GGG | + | contig392end:7206-7225 | MsG0080048652.01.T01:intron | 35.0% | |
ATGTAAATCAACTGAATCCC+AGG | - | contig392end:7466-7485 | None:intergenic | 35.0% | |
ATGTGAATTGTGAAACGACA+TGG | + | contig392end:8676-8695 | MsG0080048652.01.T02:three_prime_UTR | 35.0% | |
ATGTTGGGTTAAGTGTGATT+AGG | + | contig392end:7392-7411 | MsG0080048652.01.T01:CDS | 35.0% | |
ATTGAATGGAAAACGTGTCT+TGG | + | contig392end:7519-7538 | MsG0080048652.01.T01:CDS | 35.0% | |
ATTTACATTGCTAGAGGAAG+TGG | + | contig392end:7478-7497 | MsG0080048652.01.T01:CDS | 35.0% | |
CAAAGTAGGTCAATTAAACC+GGG | - | contig392end:8099-8118 | None:intergenic | 35.0% | |
CCAAAGTAGGTCAATTAAAC+CGG | - | contig392end:8100-8119 | None:intergenic | 35.0% | |
GAAAATAGGTCAGTTATTCC+GGG | + | contig392end:8283-8302 | MsG0080048652.01.T01:intron | 35.0% | |
TATGCAGATTCGAACAAAGT+GGG | + | contig392end:6657-6676 | MsG0080048652.01.T01:CDS | 35.0% | |
TCTGTGTGAAAAACCAAAGT+AGG | - | contig392end:8113-8132 | None:intergenic | 35.0% | |
TCTTTAGTTAGGTCCAATTG+TGG | - | contig392end:7274-7293 | None:intergenic | 35.0% | |
TGTAAATCAACTGAATCCCA+GGG | - | contig392end:7465-7484 | None:intergenic | 35.0% | |
TGTATGTCATGATGTTACAC+AGG | + | contig392end:8591-8610 | MsG0080048652.01.T01:three_prime_UTR | 35.0% | |
TGTTGGGTTAAGTGTGATTA+GGG | + | contig392end:7393-7412 | MsG0080048652.01.T01:CDS | 35.0% | |
TTATGCAGATTCGAACAAAG+TGG | + | contig392end:6656-6675 | MsG0080048652.01.T01:CDS | 35.0% | |
TTGTTCGAATCTGCATAATG+AGG | - | contig392end:6654-6673 | None:intergenic | 35.0% | |
! | AACAACTTCTTTTCCAGTGT+TGG | - | contig392end:6958-6977 | None:intergenic | 35.0% |
! | ACAACTTCTTTTCCAGTGTT+GGG | - | contig392end:6957-6976 | None:intergenic | 35.0% |
! | CAGTTGATTTACATTGCTAG+AGG | + | contig392end:7472-7491 | MsG0080048652.01.T01:CDS | 35.0% |
! | CGATTTGGAGTACGTTATTA+AGG | + | contig392end:7840-7859 | MsG0080048652.01.T01:intron | 35.0% |
! | TTGATTATCACAACCCCTTT+TGG | - | contig392end:7223-7242 | None:intergenic | 35.0% |
! | TTTTTCCTAAGTGGTGTTCA+AGG | + | contig392end:7116-7135 | MsG0080048652.01.T01:CDS | 35.0% |
!! | AAAGTGGGTTATGTCATAGA+AGG | + | contig392end:6672-6691 | MsG0080048652.01.T01:CDS | 35.0% |
!!! | ATGGTTTTTTCAGGAGCAAA+AGG | + | contig392end:6456-6475 | MsG0080048652.01.T01:five_prime_UTR | 35.0% |
AAAGTCCTTGAACACCACTT+AGG | - | contig392end:7124-7143 | None:intergenic | 40.0% | |
ACTTCAATAGCTCATGTTCC+AGG | + | contig392end:7080-7099 | MsG0080048652.01.T01:CDS | 40.0% | |
AGCTAACACAAAGCCAAAAG+GGG | + | contig392end:7207-7226 | MsG0080048652.01.T01:intron | 40.0% | |
ATAAACCCTTCCCAAATGGT+CGG | + | contig392end:8562-8581 | MsG0080048652.01.T01:three_prime_UTR | 40.0% | |
ATACAACTCTACCGACCATT+TGG | - | contig392end:8576-8595 | None:intergenic | 40.0% | |
CAAGCTAACACAAAGCCAAA+AGG | + | contig392end:7205-7224 | MsG0080048652.01.T01:intron | 40.0% | |
CCGGTTTAATTGACCTACTT+TGG | + | contig392end:8097-8116 | MsG0080048652.01.T01:intron | 40.0% | |
CTTCAAACCTAATTACCCCT+GGG | + | contig392end:7446-7465 | MsG0080048652.01.T01:CDS | 40.0% | |
GATGTCATACCTGTACCTAT+TGG | + | contig392end:6996-7015 | MsG0080048652.01.T01:CDS | 40.0% | |
GTAAATCAACTGAATCCCAG+GGG | - | contig392end:7464-7483 | None:intergenic | 40.0% | |
GTGACAACTACCAAGTAAGT+TGG | + | contig392end:7637-7656 | MsG0080048652.01.T01:intron | 40.0% | |
GTTTCATGGTGGTTCAATGA+TGG | + | contig392end:7023-7042 | MsG0080048652.01.T01:CDS | 40.0% | |
TACAACTCTACCGACCATTT+GGG | - | contig392end:8575-8594 | None:intergenic | 40.0% | |
TGTCTTGGATGCTCAAGTTA+AGG | + | contig392end:7534-7553 | MsG0080048652.01.T01:CDS | 40.0% | |
! | AAAGACACTTGTTGCACAGT+AGG | - | contig392end:7966-7985 | None:intergenic | 40.0% |
! | CAACTTCTTTTCCAGTGTTG+GGG | - | contig392end:6956-6975 | None:intergenic | 40.0% |
! | CCTTTGTTTGAAGAGTTAGC+CGG | + | contig392end:7912-7931 | MsG0080048652.01.T01:CDS | 40.0% |
! | CGTGACTAATCCCACATTTT+GGG | - | contig392end:7338-7357 | None:intergenic | 40.0% |
! | GCAACAAGTGTCTTTTAACG+TGG | + | contig392end:7971-7990 | MsG0080048652.01.T01:CDS | 40.0% |
! | TCAACTTGTTCTTCAGCCAA+GGG | + | contig392end:6617-6636 | MsG0080048652.01.T01:CDS | 40.0% |
! | TCGTGACTAATCCCACATTT+TGG | - | contig392end:7339-7358 | None:intergenic | 40.0% |
!! | ATGGTGGTGGTTACTACATT+TGG | + | contig392end:6547-6566 | MsG0080048652.01.T01:CDS | 40.0% |
!! | GAAGGTGCCTTAATAGCATT+AGG | - | contig392end:7430-7449 | None:intergenic | 40.0% |
!! | TACCTATTGGAGGTGTTTCA+TGG | + | contig392end:7009-7028 | MsG0080048652.01.T01:CDS | 40.0% |
!!! | GTTTTGGCTAAGACCAATGT+TGG | + | contig392end:6588-6607 | MsG0080048652.01.T01:CDS | 40.0% |
AAGTTGACCAGCACCAACAT+TGG | - | contig392end:6604-6623 | None:intergenic | 45.0% | |
ACAGCACAACCATTGCTTGA+GGG | + | contig392end:6522-6541 | MsG0080048652.01.T01:CDS | 45.0% | |
ACCTATGCCTAAGCCACAAT+TGG | + | contig392end:7258-7277 | MsG0080048652.01.T01:intron | 45.0% | |
ACTGAATCCCAGGGGTAATT+AGG | - | contig392end:7456-7475 | None:intergenic | 45.0% | |
AGCAATGGTTGTGCTGTCTT+CGG | - | contig392end:6519-6538 | None:intergenic | 45.0% | |
AGTTGCTGGTGAAGAAGGAA+TGG | + | contig392end:7600-7619 | MsG0080048652.01.T01:CDS | 45.0% | |
ATAGGTCAGTTATTCCGGGA+CGG | + | contig392end:8287-8306 | MsG0080048652.01.T01:intron | 45.0% | |
CACCATGAAACACCTCCAAT+AGG | - | contig392end:7014-7033 | None:intergenic | 45.0% | |
CCAGGGGTAATTAGGTTTGA+AGG | - | contig392end:7448-7467 | None:intergenic | 45.0% | |
CCGGCTAACTCTTCAAACAA+AGG | - | contig392end:7915-7934 | None:intergenic | 45.0% | |
CCTTCAAACCTAATTACCCC+TGG | + | contig392end:7445-7464 | MsG0080048652.01.T01:CDS | 45.0% | |
GAAACACCTCCAATAGGTAC+AGG | - | contig392end:7008-7027 | None:intergenic | 45.0% | |
GCTAAAGTTGCTGGTGAAGA+AGG | + | contig392end:7595-7614 | MsG0080048652.01.T01:CDS | 45.0% | |
GGTCAAATTTGGCAAACGCA+GGG | + | contig392end:6904-6923 | MsG0080048652.01.T01:intron | 45.0% | |
GTAGGTCAATTAAACCGGGA+CGG | - | contig392end:8095-8114 | None:intergenic | 45.0% | |
GTCATACCTGTACCTATTGG+AGG | + | contig392end:6999-7018 | MsG0080048652.01.T01:CDS | 45.0% | |
GTTAGGTCCAATTGTGGCTT+AGG | - | contig392end:7268-7287 | None:intergenic | 45.0% | |
TCCAATTGTGGCTTAGGCAT+AGG | - | contig392end:7262-7281 | None:intergenic | 45.0% | |
TGGTCAAATTTGGCAAACGC+AGG | + | contig392end:6903-6922 | MsG0080048652.01.T01:intron | 45.0% | |
TTGGATGCTCAAGTTAAGGC+TGG | + | contig392end:7538-7557 | MsG0080048652.01.T01:CDS | 45.0% | |
TTGTTGCACAGTAGGTGACA+AGG | - | contig392end:7958-7977 | None:intergenic | 45.0% | |
! | CAACTTGTTCTTCAGCCAAG+GGG | + | contig392end:6618-6637 | MsG0080048652.01.T01:CDS | 45.0% |
! | GTCAACTTGTTCTTCAGCCA+AGG | + | contig392end:6616-6635 | MsG0080048652.01.T01:CDS | 45.0% |
!! | CTATTGGAGGTGTTTCATGG+TGG | + | contig392end:7012-7031 | MsG0080048652.01.T01:CDS | 45.0% |
!! | GGGATTAGTCACGACCTTAA+CGG | + | contig392end:7345-7364 | MsG0080048652.01.T01:CDS | 45.0% |
!!! | TATTATAAACAAAAATTTTA+TGG | - | contig392end:6862-6881 | None:intergenic | 5.0% |
ACTCTACCGACCATTTGGGA+AGG | - | contig392end:8571-8590 | None:intergenic | 50.0% | |
AGCCGGAGAGACATCAGTAT+GGG | + | contig392end:7929-7948 | MsG0080048652.01.T01:CDS | 50.0% | |
CAACCATTGCTTGAGGGAGA+TGG | + | contig392end:6528-6547 | MsG0080048652.01.T01:CDS | 50.0% | |
CATGGACATCCAACCATGAG+AGG | + | contig392end:8694-8713 | MsG0080048652.01.T02:three_prime_UTR | 50.0% | |
CTCTACCGACCATTTGGGAA+GGG | - | contig392end:8570-8589 | None:intergenic | 50.0% | |
GACAGCACAACCATTGCTTG+AGG | + | contig392end:6521-6540 | MsG0080048652.01.T01:CDS | 50.0% | |
GCTAAGACCAATGTTGGTGC+TGG | + | contig392end:6594-6613 | MsG0080048652.01.T01:CDS | 50.0% | |
GGTAGGGAGAATGAGACTTG+TGG | - | contig392end:8039-8058 | None:intergenic | 50.0% | |
GTCAATTAAACCGGGACGGA+GGG | - | contig392end:8091-8110 | None:intergenic | 50.0% | |
TAGCCGGAGAGACATCAGTA+TGG | + | contig392end:7928-7947 | MsG0080048652.01.T01:CDS | 50.0% | |
TCCCCATACTGATGTCTCTC+CGG | - | contig392end:7934-7953 | None:intergenic | 50.0% | |
TGAGGAAGAGCAAATCCCCT+TGG | - | contig392end:6636-6655 | None:intergenic | 50.0% | |
! | GACTGATGGCGTAGTTGGAA+TGG | + | contig392end:6926-6945 | MsG0080048652.01.T01:CDS | 50.0% |
CCACCATCTCCCTCAAGCAA+TGG | - | contig392end:6534-6553 | None:intergenic | 55.0% | |
CCATTGCTTGAGGGAGATGG+TGG | + | contig392end:6531-6550 | MsG0080048652.01.T01:CDS | 55.0% | |
GCCGGAGAGACATCAGTATG+GGG | + | contig392end:7930-7949 | MsG0080048652.01.T01:CDS | 55.0% | |
GGAATGGTACTCCCCAACAC+TGG | + | contig392end:6942-6961 | MsG0080048652.01.T01:CDS | 55.0% | |
GGTCAATTAAACCGGGACGG+AGG | - | contig392end:8092-8111 | None:intergenic | 55.0% | |
GTCAGTTATTCCGGGACGGA+GGG | + | contig392end:8291-8310 | MsG0080048652.01.T01:intron | 55.0% | |
TAGTAGTACTCCCTCCGTCC+CGG | + | contig392end:8078-8097 | MsG0080048652.01.T01:intron | 55.0% | |
TTGGCAAACGCAGGGACTGA+TGG | + | contig392end:6912-6931 | MsG0080048652.01.T01:intron | 55.0% | |
! | TTGCTTGAGGGAGATGGTGG+TGG | + | contig392end:6534-6553 | MsG0080048652.01.T01:CDS | 55.0% |
GGTCAGTTATTCCGGGACGG+AGG | + | contig392end:8290-8309 | MsG0080048652.01.T01:intron | 60.0% | |
! | GCAGGGACTGATGGCGTAGT+TGG | + | contig392end:6921-6940 | MsG0080048652.01.T01:intron | 60.0% |
AGGGTGTACTCCCTCCGTCC+CGG | - | contig392end:8304-8323 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
contig392end | gene | 6406 | 8724 | 6406 | ID=MsG0080048652.01;Name=MsG0080048652.01 |
contig392end | mRNA | 6406 | 8684 | 6406 | ID=MsG0080048652.01.T01;Parent=MsG0080048652.01;Name=MsG0080048652.01.T01;_AED=0.48;_eAED=0.48;_QI=92|0.8|0.66|1|0.6|0.5|6|212|313 |
contig392end | exon | 8463 | 8482 | 8463 | ID=MsG0080048652.01.T01:exon:633;Parent=MsG0080048652.01.T01 |
contig392end | exon | 8508 | 8684 | 8508 | ID=MsG0080048652.01.T01:exon:634;Parent=MsG0080048652.01.T01 |
contig392end | five_prime_UTR | 6406 | 6497 | 6406 | ID=MsG0080048652.01.T01:five_prime_utr;Parent=MsG0080048652.01.T01 |
contig392end | CDS | 6498 | 6693 | 6498 | ID=MsG0080048652.01.T01:cds;Parent=MsG0080048652.01.T01 |
contig392end | CDS | 6925 | 7199 | 6925 | ID=MsG0080048652.01.T01:cds;Parent=MsG0080048652.01.T01 |
contig392end | CDS | 7334 | 7650 | 7334 | ID=MsG0080048652.01.T01:cds;Parent=MsG0080048652.01.T01 |
contig392end | CDS | 7911 | 8064 | 7911 | ID=MsG0080048652.01.T01:cds;Parent=MsG0080048652.01.T01 |
contig392end | three_prime_UTR | 8065 | 8079 | 8065 | ID=MsG0080048652.01.T01:three_prime_utr;Parent=MsG0080048652.01.T01 |
contig392end | three_prime_UTR | 8463 | 8482 | 8463 | ID=MsG0080048652.01.T01:three_prime_utr;Parent=MsG0080048652.01.T01 |
contig392end | three_prime_UTR | 8508 | 8684 | 8508 | ID=MsG0080048652.01.T01:three_prime_utr;Parent=MsG0080048652.01.T01 |
contig392end | mRNA | 6406 | 8724 | 6406 | ID=MsG0080048652.01.T02;Parent=MsG0080048652.01;Name=MsG0080048652.01.T02;_AED=0.48;_eAED=0.48;_QI=92|0.75|0.6|1|0.75|0.6|5|281|313 |
contig392end | exon | 8459 | 8724 | 8459 | ID=MsG0080048652.01.T02:exon:635;Parent=MsG0080048652.01.T02 |
contig392end | five_prime_UTR | 6406 | 6497 | 6406 | ID=MsG0080048652.01.T02:five_prime_utr;Parent=MsG0080048652.01.T02 |
contig392end | CDS | 6498 | 6693 | 6498 | ID=MsG0080048652.01.T02:cds;Parent=MsG0080048652.01.T02 |
contig392end | CDS | 6925 | 7199 | 6925 | ID=MsG0080048652.01.T02:cds;Parent=MsG0080048652.01.T02 |
contig392end | CDS | 7334 | 7650 | 7334 | ID=MsG0080048652.01.T02:cds;Parent=MsG0080048652.01.T02 |
contig392end | CDS | 7911 | 8064 | 7911 | ID=MsG0080048652.01.T02:cds;Parent=MsG0080048652.01.T02 |
contig392end | three_prime_UTR | 8065 | 8079 | 8065 | ID=MsG0080048652.01.T02:three_prime_utr;Parent=MsG0080048652.01.T02 |
contig392end | three_prime_UTR | 8459 | 8724 | 8459 | ID=MsG0080048652.01.T02:three_prime_utr;Parent=MsG0080048652.01.T02 |
contig392end | mRNA | 6406 | 8136 | 6406 | ID=MsG0080048652.01.T03;Parent=MsG0080048652.01;Name=MsG0080048652.01.T03;_AED=0.48;_eAED=0.48;_QI=92|0.66|0.5|1|1|1|4|72|313 |
contig392end | exon | 7911 | 8136 | 7911 | ID=MsG0080048652.01.T03:exon:636;Parent=MsG0080048652.01.T03 |
contig392end | five_prime_UTR | 6406 | 6497 | 6406 | ID=MsG0080048652.01.T03:five_prime_utr;Parent=MsG0080048652.01.T03 |
contig392end | CDS | 6498 | 6693 | 6498 | ID=MsG0080048652.01.T03:cds;Parent=MsG0080048652.01.T03 |
contig392end | CDS | 6925 | 7199 | 6925 | ID=MsG0080048652.01.T03:cds;Parent=MsG0080048652.01.T03 |
contig392end | CDS | 7334 | 7650 | 7334 | ID=MsG0080048652.01.T03:cds;Parent=MsG0080048652.01.T03 |
contig392end | CDS | 7911 | 8064 | 7911 | ID=MsG0080048652.01.T03:cds;Parent=MsG0080048652.01.T03 |
contig392end | three_prime_UTR | 8065 | 8136 | 8065 | ID=MsG0080048652.01.T03:three_prime_utr;Parent=MsG0080048652.01.T03 |
Gene Sequence |
Protein sequence |