AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007352.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007352.01.T01 MTR_5g099310 97.531 243 5 1 247 488 452 694 1.88e-162 491
MsG0280007352.01.T01 MTR_5g099310 51.965 229 63 6 1 189 1 222 1.52e-48 180
MsG0280007352.01.T01 MTR_5g099310 97.531 243 5 1 247 488 452 694 8.84e-159 492
MsG0280007352.01.T01 MTR_5g099310 51.965 229 63 6 1 189 1 222 2.40e-48 179
MsG0280007352.01.T01 MTR_8g036080 62.948 251 88 2 243 488 515 765 1.06e-94 315
MsG0280007352.01.T01 MTR_7g075030 60.870 253 94 2 243 490 514 766 6.31e-94 312
MsG0280007352.01.T01 MTR_4g124430 51.709 234 96 4 255 488 524 740 1.87e-63 224
MsG0280007352.01.T01 MTR_3g068130 44.025 159 86 2 333 488 559 717 2.34e-37 147
MsG0280007352.01.T01 MTR_5g080650 42.857 154 86 1 337 488 561 714 1.01e-35 142
MsG0280007352.01.T01 MTR_3g068140 41.509 159 85 2 335 488 561 716 1.53e-34 138
MsG0280007352.01.T01 MTR_6g086260 40.123 162 91 3 333 488 495 656 2.55e-29 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007352.01.T01 AT4G38200 74.486 243 61 1 247 488 24 266 1.32e-117 374
MsG0280007352.01.T01 AT4G38200 74.486 243 61 1 247 488 444 686 1.49e-115 374
MsG0280007352.01.T01 AT4G38200 39.506 243 73 9 1 189 1 223 2.34e-29 123
MsG0280007352.01.T01 AT4G35380 68.000 250 67 3 247 488 27 271 6.00e-103 335
MsG0280007352.01.T01 AT4G35380 68.000 250 67 3 247 488 465 709 7.52e-102 335
MsG0280007352.01.T01 AT4G35380 34.583 240 90 7 1 189 1 224 6.45e-27 115
MsG0280007352.01.T01 AT3G60860 59.363 251 97 2 243 488 514 764 2.28e-90 302
MsG0280007352.01.T01 AT1G01960 57.778 270 80 6 243 491 502 758 7.32e-88 295
MsG0280007352.01.T01 AT3G43300 49.569 232 97 4 259 488 513 726 2.40e-58 209
MsG0280007352.01.T01 AT3G43300 49.569 232 97 4 259 488 532 745 2.97e-58 209
MsG0280007352.01.T01 AT3G43300 49.569 232 97 4 259 488 513 726 3.26e-58 209
MsG0280007352.01.T01 AT1G13980 43.871 155 84 2 337 488 556 710 1.73e-35 141
MsG0280007352.01.T01 AT1G13980 43.871 155 84 2 337 488 556 710 1.73e-35 141
MsG0280007352.01.T01 AT5G19610 44.805 154 82 2 338 488 490 643 1.49e-33 135
MsG0280007352.01.T01 AT5G39500 36.458 192 108 2 311 488 519 710 2.19e-33 135
MsG0280007352.01.T01 AT5G39500 36.458 192 108 2 311 488 519 710 2.19e-33 135

Find 135 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCAAGATTGGTGACTATT+TGG 0.152035 2:-14404091 MsG0280007352.01.T01:CDS
TCTCCTAAACTAGTGCTTTC+AGG 0.178893 2:+14404616 None:intergenic
GTCCATCCCTTTGAAGTTAA+AGG 0.185233 2:+14404020 None:intergenic
ACCTAGAGAGAGAAGCTTAA+AGG 0.284224 2:+14407769 None:intergenic
TGGACTTTGGTGAAGCTATA+CGG 0.287025 2:-14404002 MsG0280007352.01.T01:CDS
GCCAAGATTGGTGACTATTT+GGG 0.297158 2:-14404090 MsG0280007352.01.T01:CDS
CAAGGCCACCGGTGTTCTTC+AGG 0.307827 2:+14404118 None:intergenic
AGGAACAGAGCCACTTCTTC+TGG 0.312594 2:+14404138 None:intergenic
TCAAGTCTCCTGGCCTTATC+TGG 0.317839 2:+14404653 None:intergenic
ACCCTCGTTCAAATTCTTAT+CGG 0.321988 2:+14407409 None:intergenic
CCCCAAATAGTCACCAATCT+TGG 0.341000 2:+14404089 None:intergenic
TACCGACGCTCATAATAATA+TGG 0.356692 2:-14403827 MsG0280007352.01.T01:CDS
GGCATATAAAGCTGAGCTTC+AGG 0.361305 2:-14404488 MsG0280007352.01.T01:intron
TGAGAATTCAGAATTTATAT+CGG 0.361893 2:+14404537 None:intergenic
AGAGTTTGTTAATGAACTCT+TGG 0.366621 2:-14407438 MsG0280007352.01.T01:CDS
TTCAACAACCTTAGCGTAAG+AGG 0.372053 2:+14407808 None:intergenic
ATCGATGCCATCTGTAAATC+TGG 0.381056 2:-14407698 MsG0280007352.01.T01:CDS
GTCTACCTCGGTGGAGTTAA+CGG 0.383438 2:-14407555 MsG0280007352.01.T01:CDS
ACAGAAAATTGATCGCATTA+TGG 0.383609 2:-14403944 MsG0280007352.01.T01:CDS
AGCAATTGTTTGAGTGTGTT+TGG 0.395218 2:-14405133 MsG0280007352.01.T01:CDS
ATAATATTGAAGATTCAGTT+AGG 0.395905 2:+14403787 None:intergenic
AACTCGATTGCCTCTTCGCC+AGG 0.399375 2:+14407672 None:intergenic
CTCCTAAACTAGTGCTTTCA+GGG 0.401313 2:+14404617 None:intergenic
TAGATTCCTTTAACTTCAAA+GGG 0.403349 2:-14404026 MsG0280007352.01.T01:CDS
CTTCAGGGATTTAGGTTGCC+TGG 0.405137 2:-14403973 MsG0280007352.01.T01:CDS
ATTGCAGCTGATTAAGTTCA+AGG 0.424413 2:-14405221 MsG0280007352.01.T01:CDS
GTAGATTCCTTTAACTTCAA+AGG 0.429234 2:-14404027 MsG0280007352.01.T01:CDS
GGCCTTGACGAGGCCAAGAT+TGG 0.435475 2:-14404102 MsG0280007352.01.T01:CDS
TGAAAACAATGGTGACGATC+TGG 0.435690 2:+14407499 None:intergenic
ACCTTTAAGCTTCTCTCTCT+AGG 0.435729 2:-14407770 MsG0280007352.01.T01:CDS
AACTTCAAAGGGATGGACTT+TGG 0.436773 2:-14404015 MsG0280007352.01.T01:CDS
GGCGAAGAGGCAATCGAGTT+GGG 0.442611 2:-14407669 MsG0280007352.01.T01:CDS
TATCAAGAATTCAATACCCT+TGG 0.450359 2:+14404185 None:intergenic
AAACTGCTCGGGACCACCTA+CGG 0.453251 2:-14404776 MsG0280007352.01.T01:CDS
AGCCCTGAAAGCACTAGTTT+AGG 0.454207 2:-14404619 MsG0280007352.01.T01:CDS
AACTGCTCGGGACCACCTAC+GGG 0.459217 2:-14404775 MsG0280007352.01.T01:CDS
TTCCTTTAACTTCAAAGGGA+TGG 0.465156 2:-14404022 MsG0280007352.01.T01:CDS
AATCCCTGGGAGGTCCTTCA+CGG 0.470552 2:-14408043 MsG0280007352.01.T01:CDS
GGTCAGCATCATTAAGTCAA+TGG 0.471894 2:-14404689 MsG0280007352.01.T01:CDS
CGACTTAGCACAGATCTGAT+TGG 0.473560 2:+14407530 None:intergenic
AATGTCGGCATCGCAATCCC+TGG 0.474044 2:-14408057 MsG0280007352.01.T01:CDS
TTCACGGTGTGGCAGAGTGG+TGG 0.477289 2:-14408027 MsG0280007352.01.T01:CDS
GTCAGCATCATTAAGTCAAT+GGG 0.478339 2:-14404688 MsG0280007352.01.T01:CDS
GGACTTTGGTGAAGCTATAC+GGG 0.480550 2:-14404001 MsG0280007352.01.T01:CDS
TAAGTCAATGGGAGCTTGGA+TGG 0.482081 2:-14404677 MsG0280007352.01.T01:CDS
GAGAGTCAGCTAACTCTGAA+TGG 0.483451 2:-14404595 MsG0280007352.01.T01:CDS
TCTGCACTGCTGAAAGAACT+AGG 0.488400 2:+14403889 None:intergenic
GAGAATTCAGAATTTATATC+GGG 0.490056 2:+14404538 None:intergenic
CTGCCACATTAGAGCAGCGC+CGG 0.490612 2:-14404510 MsG0280007352.01.T01:CDS
CTAACTCTGAATGGAGAAGA+AGG 0.496739 2:-14404586 MsG0280007352.01.T01:CDS
TTGGGTACAGGGCGTTGGGT+AGG 0.496994 2:-14405156 MsG0280007352.01.T01:CDS
TAATAATATGGTGAAAGATA+AGG 0.500305 2:-14403815 MsG0280007352.01.T01:CDS
TTTACAAGATTCAAGTCTCC+TGG 0.505225 2:+14404643 None:intergenic
TCACGGTGTGGCAGAGTGGT+GGG 0.505945 2:-14408026 MsG0280007352.01.T01:CDS
CATGGAGTCTTCCTCGACTC+TGG 0.514316 2:+14407476 None:intergenic
CGGCCTTCTGAAAACTGCTC+GGG 0.516121 2:-14404787 MsG0280007352.01.T01:CDS
CACCATATTATTATGAGCGT+CGG 0.522334 2:+14403825 None:intergenic
CTTGGCCTCGTCAAGGCCAC+CGG 0.522874 2:+14404107 None:intergenic
GGGCGAGGAAGAGAGGTTGA+AGG 0.523691 2:+14407837 None:intergenic
TGGCGAAGAGGCAATCGAGT+TGG 0.525546 2:-14407670 MsG0280007352.01.T01:CDS
GGGATCTAACAGCTGAAAGA+AGG 0.526007 2:+14407634 None:intergenic
GTCGACCACATCTTTGTCTC+CGG 0.526135 2:-14404752 MsG0280007352.01.T01:CDS
TCATTAAGTCAATGGGAGCT+TGG 0.528305 2:-14404681 MsG0280007352.01.T01:CDS
AAAGAAGAAGAAAACAGTGT+GGG 0.530371 2:-14405679 MsG0280007352.01.T01:CDS
CCAAGATTGGTGACTATTTG+GGG 0.534132 2:-14404089 MsG0280007352.01.T01:CDS
TCATTAACAAACTCTTTGAA+CGG 0.536833 2:+14407446 None:intergenic
TGCCACATTAGAGCAGCGCC+GGG 0.538396 2:-14404509 MsG0280007352.01.T01:CDS
CACACCGTGAAGGACCTCCC+AGG 0.538920 2:+14408039 None:intergenic
ACATATTCAGCATCGGAGGA+AGG 0.540248 2:+14407860 None:intergenic
CATCTGTAAATCTGGTGGCC+TGG 0.541552 2:-14407690 MsG0280007352.01.T01:CDS
TTGATGATCTTATCGAGTGA+TGG 0.542972 2:+14408002 None:intergenic
CCTTGACTCCTCTTACGCTA+AGG 0.543060 2:-14407816 MsG0280007352.01.T01:CDS
GAGTCAAGGGCGAGGAAGAG+AGG 0.543365 2:+14407830 None:intergenic
AAGAATTCAATACCCTTGGA+AGG 0.543395 2:+14404189 None:intergenic
GAGCTTGGATGGACCAGATA+AGG 0.544400 2:-14404666 MsG0280007352.01.T01:CDS
TCCCCTTGCATTCTTATCCG+TGG 0.544683 2:-14407615 MsG0280007352.01.T01:CDS
TAATATTGAAGATTCAGTTA+GGG 0.546462 2:+14403788 None:intergenic
ATTAAGTTCAAGGAGTACTC+TGG 0.548790 2:-14405211 MsG0280007352.01.T01:CDS
CCTTAGCGTAAGAGGAGTCA+AGG 0.552099 2:+14407816 None:intergenic
CATATTCAGCATCGGAGGAA+GGG 0.556780 2:+14407861 None:intergenic
ACGGCCTTCTGAAAACTGCT+CGG 0.559314 2:-14404788 MsG0280007352.01.T01:CDS
TGGATGGACCAGATAAGGCC+AGG 0.564396 2:-14404661 MsG0280007352.01.T01:CDS
ATGTCGGCATCGCAATCCCT+GGG 0.565256 2:-14408056 MsG0280007352.01.T01:CDS
ACCACTCTGCCACACCGTGA+AGG 0.568454 2:+14408029 None:intergenic
TTTAATAGAAAACCTTCCAA+GGG 0.569700 2:-14404201 MsG0280007352.01.T01:CDS
GAAAACAATGGTGACGATCT+GGG 0.570401 2:+14407500 None:intergenic
CAGAGTCGAGGAAGACTCCA+TGG 0.572253 2:-14407475 MsG0280007352.01.T01:CDS
AATCTGGTGGCCTGGCGAAG+AGG 0.580542 2:-14407682 MsG0280007352.01.T01:CDS
TGGTAGTTCTCCAGAAGAAG+TGG 0.587842 2:-14404148 MsG0280007352.01.T01:CDS
CGGAAAGTAATATCTTGTGC+CGG 0.592050 2:+14404733 None:intergenic
GAAAGAAGAAGAAAACAGTG+TGG 0.596960 2:-14405680 MsG0280007352.01.T01:CDS
ACATGAATCAGTGAAGTGCT+TGG 0.597031 2:-14404710 MsG0280007352.01.T01:CDS
TGCCCGGCGCTGCTCTAATG+TGG 0.597312 2:+14404507 None:intergenic
GAAGCTCAGCTTTATATGCC+CGG 0.601204 2:+14404491 None:intergenic
ACACCGTGAAGGACCTCCCA+GGG 0.601902 2:+14408040 None:intergenic
TCTCCACGGATAAGAATGCA+AGG 0.603125 2:+14407612 None:intergenic
CACCGATAAGAATTTGAACG+AGG 0.604704 2:-14407411 MsG0280007352.01.T01:CDS
CGTAAGAGGAGTCAAGGGCG+AGG 0.606948 2:+14407822 None:intergenic
TCTTTGAACGGATACATCCA+TGG 0.607292 2:+14407458 None:intergenic
CTCGACTCTGGTGAAAACAA+TGG 0.607429 2:+14407488 None:intergenic
GATATTTGCAGGATAGTCAA+CGG 0.607498 2:-14404807 MsG0280007352.01.T01:intron
CACCAATCTTGGCCTCGTCA+AGG 0.611127 2:+14404100 None:intergenic
CTGCACTGCTGAAAGAACTA+GGG 0.611194 2:+14403890 None:intergenic
CTGGGAGGTCCTTCACGGTG+TGG 0.614487 2:-14408038 MsG0280007352.01.T01:CDS
CAATCAGATCTGTGCTAAGT+CGG 0.619957 2:-14407529 MsG0280007352.01.T01:CDS
TTGAAGGACATATTCAGCAT+CGG 0.620881 2:+14407853 None:intergenic
GATGTGGTCGACCCCGTAGG+TGG 0.624017 2:+14404763 None:intergenic
AAGAAGAAGAAAACAGTGTG+GGG 0.626904 2:-14405678 MsG0280007352.01.T01:intron
ACTTGTTATAATGTCTACCT+CGG 0.633450 2:-14407567 MsG0280007352.01.T01:CDS
GAACACCGGTGGCCTTGACG+AGG 0.633501 2:-14404112 MsG0280007352.01.T01:CDS
CTTAGCGTAAGAGGAGTCAA+GGG 0.636737 2:+14407817 None:intergenic
TCCTTCACGGTGTGGCAGAG+TGG 0.637847 2:-14408030 MsG0280007352.01.T01:CDS
AAAGATGTGGTCGACCCCGT+AGG 0.641194 2:+14404760 None:intergenic
TCCACGGATAAGAATGCAAG+GGG 0.645623 2:+14407614 None:intergenic
CAGGCCACCAGATTTACAGA+TGG 0.647213 2:+14407691 None:intergenic
CTGTTCCTGAAGAACACCGG+TGG 0.648891 2:-14404123 MsG0280007352.01.T01:CDS
ACCGATAAGAATTTGAACGA+GGG 0.653126 2:-14407410 MsG0280007352.01.T01:intron
CTCCACGGATAAGAATGCAA+GGG 0.653423 2:+14407613 None:intergenic
GATGCCATCTGTAAATCTGG+TGG 0.655514 2:-14407695 MsG0280007352.01.T01:CDS
TTGAGAATGCTTACGCCATG+CGG 0.656368 2:+14407974 None:intergenic
TGTTATAATGTCTACCTCGG+TGG 0.656455 2:-14407564 MsG0280007352.01.T01:CDS
GCTCTGTTCCTGAAGAACAC+CGG 0.663091 2:-14404126 MsG0280007352.01.T01:CDS
AGCACTTCACTGATTCATGT+CGG 0.665312 2:+14404713 None:intergenic
AAGGACATATTCAGCATCGG+AGG 0.665421 2:+14407856 None:intergenic
CAGCTGAAAGAAGGACTCTG+AGG 0.684820 2:+14407643 None:intergenic
CAAGATTGGTGACTATTTGG+GGG 0.691755 2:-14404088 MsG0280007352.01.T01:CDS
TCTGAACGAGACAATCTCCA+CGG 0.695411 2:+14407598 None:intergenic
AGATCATCAAGAATGCCGCA+TGG 0.697504 2:-14407989 MsG0280007352.01.T01:CDS
TTGTGCCGGAGACAAAGATG+TGG 0.721317 2:+14404747 None:intergenic
TCGGCATCGCAATCCCTGGG+AGG 0.721474 2:-14408053 MsG0280007352.01.T01:CDS
ACTGCTCGGGACCACCTACG+GGG 0.728471 2:-14404774 MsG0280007352.01.T01:CDS
CTCTCTCTAGGTCTTGTCCG+CGG 0.741286 2:-14407758 MsG0280007352.01.T01:CDS
CACAGAGTAAGCAAGAACGT+AGG 0.755575 2:+14403861 None:intergenic
GTGAATCGATGATCTCGCCG+CGG 0.764395 2:+14407741 None:intergenic
TGGTTCCGTTAACTCCACCG+AGG 0.776992 2:+14407550 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAACAAAAAAACAGT+CGG - Chr2:14405204-14405223 MsG0280007352.01.T01:CDS 15.0%
!! TCTATATAATAATTGATTGT+TGG - Chr2:14405574-14405593 MsG0280007352.01.T01:intron 15.0%
!! TTTAATTAAACATGTTAACA+TGG + Chr2:14405082-14405101 None:intergenic 15.0%
!!! AATATATTTTATAACTAGGT+AGG + Chr2:14405475-14405494 None:intergenic 15.0%
!!! ATACCTTTTATTTAATTGTT+TGG - Chr2:14406808-14406827 MsG0280007352.01.T01:intron 15.0%
!!! CACAAATATATTTTATAACT+AGG + Chr2:14405479-14405498 None:intergenic 15.0%
!!! TTTTTTTTTCTTTTCTATCA+AGG + Chr2:14406105-14406124 None:intergenic 15.0%
!! AAAAAGATGCTGTATTATAT+CGG - Chr2:14406120-14406139 MsG0280007352.01.T01:intron 20.0%
!! AAAATGTCAATAATAATCTG+AGG + Chr2:14405886-14405905 None:intergenic 20.0%
!! ATATAGAAAAGAAAGATCTT+GGG + Chr2:14405561-14405580 None:intergenic 20.0%
!! TAATAATATGGTGAAAGATA+AGG - Chr2:14408042-14408061 MsG0280007352.01.T01:CDS 20.0%
!! TATATAGAAAAGAAAGATCT+TGG + Chr2:14405562-14405581 None:intergenic 20.0%
!! TCTATGTATAAGATGATATT+AGG + Chr2:14407445-14407464 None:intergenic 20.0%
!! TGAGAATTCAGAATTTATAT+CGG + Chr2:14407323-14407342 None:intergenic 20.0%
!!! AAATTTTTGGCAAAAATGTA+TGG + Chr2:14404478-14404497 None:intergenic 20.0%
!!! ATTAAGCTAATTGTAGTTTT+TGG - Chr2:14406682-14406701 MsG0280007352.01.T01:intron 20.0%
!!! TCACTTTTTCTTTTTAAATC+TGG - Chr2:14404911-14404930 MsG0280007352.01.T01:intron 20.0%
!!! TTAAGCTAATTGTAGTTTTT+GGG - Chr2:14406683-14406702 MsG0280007352.01.T01:intron 20.0%
!!! TTTTGAGTAGTTTGTTTATA+TGG - Chr2:14406902-14406921 MsG0280007352.01.T01:intron 20.0%
! AAGCTTATATTTACTGTTTC+TGG + Chr2:14406479-14406498 None:intergenic 25.0%
! AAGTGGTAGTAGTAAAATAA+GGG - Chr2:14404624-14404643 MsG0280007352.01.T01:CDS 25.0%
! AATTAAACATGTTAACATGG+AGG + Chr2:14405079-14405098 None:intergenic 25.0%
! ATAACTAGGTAGGATAAAAT+AGG + Chr2:14405465-14405484 None:intergenic 25.0%
! ATAATTCCTTAGATATTTGC+AGG - Chr2:14407039-14407058 MsG0280007352.01.T01:intron 25.0%
! ATGAAATTCACACACAAAAA+AGG - Chr2:14405527-14405546 MsG0280007352.01.T01:intron 25.0%
! CAATAGATAAATCGTATTCA+GGG - Chr2:14406947-14406966 MsG0280007352.01.T01:intron 25.0%
! CCTCCAAACAATTAAATAAA+AGG + Chr2:14406814-14406833 None:intergenic 25.0%
! CTGTTATCAAAATTTAGATC+AGG - Chr2:14405736-14405755 MsG0280007352.01.T01:intron 25.0%
! GAAATCAAGTATGGATAAAT+AGG + Chr2:14406991-14407010 None:intergenic 25.0%
! GAGAATTCAGAATTTATATC+GGG + Chr2:14407322-14407341 None:intergenic 25.0%
! GCTAAGATAAATAACACTTA+AGG - Chr2:14405498-14405517 MsG0280007352.01.T01:intron 25.0%
! TAACTAGGTAGGATAAAATA+GGG + Chr2:14405464-14405483 None:intergenic 25.0%
! TAGGAAGAATAGAAATTGTT+CGG - Chr2:14406785-14406804 MsG0280007352.01.T01:intron 25.0%
! TCATTAACAAACTCTTTGAA+CGG + Chr2:14404414-14404433 None:intergenic 25.0%
! TGTTAATTATGATTGTGATG+TGG - Chr2:14405906-14405925 MsG0280007352.01.T01:intron 25.0%
! TTGATAAGCAACAAAAAAGT+TGG - Chr2:14407689-14407708 MsG0280007352.01.T01:CDS 25.0%
! TTTAATAGAAAACCTTCCAA+GGG - Chr2:14407656-14407675 MsG0280007352.01.T01:CDS 25.0%
!! ATAATTTGTCCAATAAGTTC+AGG + Chr2:14405855-14405874 None:intergenic 25.0%
!! CATCTATATTTTCTGTTACA+TGG - Chr2:14405606-14405625 MsG0280007352.01.T01:intron 25.0%
!! GACCTCATTGATAAAATTTT+TGG + Chr2:14404491-14404510 None:intergenic 25.0%
!! TAGATTCCTTTAACTTCAAA+GGG - Chr2:14407831-14407850 MsG0280007352.01.T01:CDS 25.0%
!! TGCCAAAAATTTTATCAATG+AGG - Chr2:14404486-14404505 MsG0280007352.01.T01:intron 25.0%
!! TTTTAATAGAAAACCTTCCA+AGG - Chr2:14407655-14407674 MsG0280007352.01.T01:CDS 25.0%
!!! CCTTTTATTTAATTGTTTGG+AGG - Chr2:14406811-14406830 MsG0280007352.01.T01:intron 25.0%
!!! CTGATCTAAATTTTGATAAC+AGG + Chr2:14405738-14405757 None:intergenic 25.0%
!!! CTTATTTTAATCTGTACTGT+AGG - Chr2:14404855-14404874 MsG0280007352.01.T01:intron 25.0%
AAAGAAGAAGAAAACAGTGT+GGG - Chr2:14406178-14406197 MsG0280007352.01.T01:intron 30.0%
AATAGGAGAAAAGAATACTG+TGG + Chr2:14406974-14406993 None:intergenic 30.0%
ACAAACTACTCAAAATATGC+AGG + Chr2:14406897-14406916 None:intergenic 30.0%
ACAGAAAATTGATCGCATTA+TGG - Chr2:14407913-14407932 MsG0280007352.01.T01:intron 30.0%
ACTGAAATTAGCAATAACAG+AGG - Chr2:14406520-14406539 MsG0280007352.01.T01:intron 30.0%
AGCACATGTTTGTACTTTAA+GGG - Chr2:14405350-14405369 MsG0280007352.01.T01:intron 30.0%
ATACCTTTCTGCATTTAACA+TGG + Chr2:14407629-14407648 None:intergenic 30.0%
ATATGTAGTCAGTAGTCATT+TGG - Chr2:14405249-14405268 MsG0280007352.01.T01:intron 30.0%
CAAACTACTCAAAATATGCA+GGG + Chr2:14406896-14406915 None:intergenic 30.0%
CAAGATAGAGAAATCAAGTA+TGG + Chr2:14407000-14407019 None:intergenic 30.0%
CAGGCTTGAAAAAAAGAAAT+CGG - Chr2:14405755-14405774 MsG0280007352.01.T01:intron 30.0%
CCAATAGATAAATCGTATTC+AGG - Chr2:14406946-14406965 MsG0280007352.01.T01:intron 30.0%
CCTGAATACGATTTATCTAT+TGG + Chr2:14406949-14406968 None:intergenic 30.0%
GAAGTGGTAGTAGTAAAATA+AGG - Chr2:14404623-14404642 MsG0280007352.01.T01:CDS 30.0%
GATGCTTCAACATATTTGAA+AGG - Chr2:14405928-14405947 MsG0280007352.01.T01:intron 30.0%
GCATGAATTGAATCCATAAT+CGG + Chr2:14407553-14407572 None:intergenic 30.0%
GTTCAAAGTTCAAACACAAT+TGG + Chr2:14404983-14405002 None:intergenic 30.0%
GTTTGAACTTTGAACTATTG+TGG - Chr2:14404988-14405007 MsG0280007352.01.T01:intron 30.0%
GTTTGTTTATATGGTAGACT+TGG - Chr2:14406911-14406930 MsG0280007352.01.T01:intron 30.0%
TATCAAGAATTCAATACCCT+TGG + Chr2:14407675-14407694 None:intergenic 30.0%
TCATTGTCAAGAGATAACAA+CGG + Chr2:14405977-14405996 None:intergenic 30.0%
TGATAACAGGTTCATGAAAA+TGG + Chr2:14405725-14405744 None:intergenic 30.0%
TTTAATTGTTTGGAGGAGAA+TGG - Chr2:14406818-14406837 MsG0280007352.01.T01:intron 30.0%
TTTCCATGTTAAATGCAGAA+AGG - Chr2:14407623-14407642 MsG0280007352.01.T01:CDS 30.0%
! AACTGTTCTAGACTAAAGAT+AGG - Chr2:14406395-14406414 MsG0280007352.01.T01:intron 30.0%
! GTAGATTCCTTTAACTTCAA+AGG - Chr2:14407830-14407849 MsG0280007352.01.T01:CDS 30.0%
! TGTTGTTGATGAGAATTTCA+TGG + Chr2:14404688-14404707 None:intergenic 30.0%
! TTTTATCAATGAGGTCATTG+AGG - Chr2:14404495-14404514 MsG0280007352.01.T01:CDS 30.0%
!! ACTTGTTATAATGTCTACCT+CGG - Chr2:14404290-14404309 MsG0280007352.01.T01:intron 30.0%
!! AGAGTTTGTTAATGAACTCT+TGG - Chr2:14404419-14404438 MsG0280007352.01.T01:intron 30.0%
!! TTTCTTTTCTGTCACTTCAT+AGG + Chr2:14406161-14406180 None:intergenic 30.0%
!!! AATTGTAGTTTTTGGGTACA+GGG - Chr2:14406690-14406709 MsG0280007352.01.T01:intron 30.0%
!!! AGTTTGAACCTCTTTGTTTT+AGG - Chr2:14406281-14406300 MsG0280007352.01.T01:intron 30.0%
!!! GTCATTTTTTGCAGAAAACT+GGG + Chr2:14405829-14405848 None:intergenic 30.0%
!!! TAATTGTAGTTTTTGGGTAC+AGG - Chr2:14406689-14406708 MsG0280007352.01.T01:intron 30.0%
AAAAAAACAGTCGGTGCATT+TGG - Chr2:14405213-14405232 MsG0280007352.01.T01:CDS 35.0%
AAAAATGGCCATTGCTGAAA+GGG + Chr2:14405689-14405708 None:intergenic 35.0%
AAAACATACCTGTGTTGTGT+CGG - Chr2:14407495-14407514 MsG0280007352.01.T01:CDS 35.0%
AAACATGTGGAGGAATAGAA+AGG - Chr2:14406563-14406582 MsG0280007352.01.T01:intron 35.0%
AACAATTTGTCATCCACAGA+AGG + Chr2:14407408-14407427 None:intergenic 35.0%
AACATGTTAACATGGAGGTT+TGG + Chr2:14405074-14405093 None:intergenic 35.0%
AAGAAGAAGAAAACAGTGTG+GGG - Chr2:14406179-14406198 MsG0280007352.01.T01:intron 35.0%
AAGAATTCAATACCCTTGGA+AGG + Chr2:14407671-14407690 None:intergenic 35.0%
AAGAGATACAAACTGTAGCA+TGG + Chr2:14405414-14405433 None:intergenic 35.0%
ACATTGTTCCAAAGAAAAGC+AGG + Chr2:14405118-14405137 None:intergenic 35.0%
ACCCTCGTTCAAATTCTTAT+CGG + Chr2:14404451-14404470 None:intergenic 35.0%
ACCGATAAGAATTTGAACGA+GGG - Chr2:14404447-14404466 MsG0280007352.01.T01:intron 35.0%
AGCAATTGTTTGAGTGTGTT+TGG - Chr2:14406724-14406743 MsG0280007352.01.T01:intron 35.0%
AGTAGTAAAATAAGGGAGGA+TGG - Chr2:14404631-14404650 MsG0280007352.01.T01:CDS 35.0%
ATCAAGGAATCTGCATAAAC+AGG + Chr2:14406089-14406108 None:intergenic 35.0%
ATTGCAGCTGATTAAGTTCA+AGG - Chr2:14406636-14406655 MsG0280007352.01.T01:intron 35.0%
CAAATTCTAGTAGCTTCTGT+TGG + Chr2:14406370-14406389 None:intergenic 35.0%
CAACTAAGTAGCTAAACATG+TGG - Chr2:14406550-14406569 MsG0280007352.01.T01:intron 35.0%
CACCATATTATTATGAGCGT+CGG + Chr2:14408035-14408054 None:intergenic 35.0%
CAGCACATGTTTGTACTTTA+AGG - Chr2:14405349-14405368 MsG0280007352.01.T01:intron 35.0%
CATTGTTCCAAAGAAAAGCA+GGG + Chr2:14405117-14405136 None:intergenic 35.0%
CTCAAAATATGCAGGGAAAA+TGG + Chr2:14406889-14406908 None:intergenic 35.0%
CTGATGAACCTAAAACAAAG+AGG + Chr2:14406292-14406311 None:intergenic 35.0%
CTTAACGTTGTCATGGATAT+TGG - Chr2:14404759-14404778 MsG0280007352.01.T01:CDS 35.0%
GAAAATGGTTTGACCCTAAA+AGG + Chr2:14406874-14406893 None:intergenic 35.0%
GAAAGAAGAAGAAAACAGTG+TGG - Chr2:14406177-14406196 MsG0280007352.01.T01:intron 35.0%
GAACACTTTCTATGTGAGTT+AGG - Chr2:14406766-14406785 MsG0280007352.01.T01:intron 35.0%
GACTATCCTGCAAATATCTA+AGG + Chr2:14407048-14407067 None:intergenic 35.0%
GATATTTGCAGGATAGTCAA+CGG - Chr2:14407050-14407069 MsG0280007352.01.T01:intron 35.0%
GATTTGAATCAGAATCATCG+CGG + Chr2:14403962-14403981 None:intergenic 35.0%
GTCAGCATCATTAAGTCAAT+GGG - Chr2:14407169-14407188 MsG0280007352.01.T01:intron 35.0%
GTCTTAGAAAATCTCTTTGC+TGG - Chr2:14405306-14405325 MsG0280007352.01.T01:intron 35.0%
TACCGACGCTCATAATAATA+TGG - Chr2:14408030-14408049 MsG0280007352.01.T01:CDS 35.0%
TCAAGGAATCTGCATAAACA+GGG + Chr2:14406088-14406107 None:intergenic 35.0%
TGAAGAACATTCCAAGTACT+CGG + Chr2:14405805-14405824 None:intergenic 35.0%
TGGTAGTAGTAAAATAAGGG+AGG - Chr2:14404627-14404646 MsG0280007352.01.T01:CDS 35.0%
TTGAAGGACATATTCAGCAT+CGG + Chr2:14404007-14404026 None:intergenic 35.0%
TTTACAAGATTCAAGTCTCC+TGG + Chr2:14407217-14407236 None:intergenic 35.0%
TTTGTCCAATAAGTTCAGGA+CGG + Chr2:14405851-14405870 None:intergenic 35.0%
! ACATGTTTGTACTTTAAGGG+AGG - Chr2:14405353-14405372 MsG0280007352.01.T01:intron 35.0%
! CTGATTCAAATCCCCTTTTT+AGG - Chr2:14403970-14403989 MsG0280007352.01.T01:CDS 35.0%
! GTTTAGCATTGGGTATTTCT+AGG + Chr2:14404546-14404565 None:intergenic 35.0%
! TATTTTCTGTTACATGGTGC+AGG - Chr2:14405612-14405631 MsG0280007352.01.T01:intron 35.0%
! TTCCTTTAACTTCAAAGGGA+TGG - Chr2:14407835-14407854 MsG0280007352.01.T01:CDS 35.0%
! TTGATGATCTTATCGAGTGA+TGG + Chr2:14403858-14403877 None:intergenic 35.0%
! TTGTTATTATCTGCCTTCTG+TGG - Chr2:14407392-14407411 MsG0280007352.01.T01:intron 35.0%
!! AAAAGCATCAGCACATGATA+TGG + Chr2:14407605-14407624 None:intergenic 35.0%
!! AACAATGTTTTTGTCGTTCC+CGG - Chr2:14405130-14405149 MsG0280007352.01.T01:intron 35.0%
!! AGTCATTTGGTGTGTTTAGT+CGG - Chr2:14405262-14405281 MsG0280007352.01.T01:intron 35.0%
!! AGTGTGTTTGGTGTAAGATT+TGG - Chr2:14406736-14406755 MsG0280007352.01.T01:intron 35.0%
!! ATCGCTTTTCAAAAACAGAC+AGG - Chr2:14405996-14406015 MsG0280007352.01.T01:intron 35.0%
!! ATTAAGTTCAAGGAGTACTC+TGG - Chr2:14406646-14406665 MsG0280007352.01.T01:intron 35.0%
!! TCGCTTTTCAAAAACAGACA+GGG - Chr2:14405997-14406016 MsG0280007352.01.T01:intron 35.0%
!! TGGTGTAAGATTTGGTTTGT+TGG - Chr2:14406744-14406763 MsG0280007352.01.T01:intron 35.0%
!!! GGTCATTTTTTGCAGAAAAC+TGG + Chr2:14405830-14405849 None:intergenic 35.0%
!!! TTTGAGATGGTTTTGTTGGA+AGG + Chr2:14405029-14405048 None:intergenic 35.0%
AACAGTGTGGGGTAAATGAA+AGG - Chr2:14406190-14406209 MsG0280007352.01.T01:intron 40.0%
AATGACCGTCCTGAACTTAT+TGG - Chr2:14405843-14405862 MsG0280007352.01.T01:intron 40.0%
ACAAAACCATCTCAAAGCCA+CGG - Chr2:14405033-14405052 MsG0280007352.01.T01:intron 40.0%
ACCTAGAGAGAGAAGCTTAA+AGG + Chr2:14404091-14404110 None:intergenic 40.0%
ACCTTTAAGCTTCTCTCTCT+AGG - Chr2:14404087-14404106 MsG0280007352.01.T01:CDS 40.0%
ACTACTACCACTTCCATCAT+CGG + Chr2:14404617-14404636 None:intergenic 40.0%
ACTTGATATGTCCTTCACTC+TGG - Chr2:14405158-14405177 MsG0280007352.01.T01:CDS 40.0%
AGAATTTACCGACACAACAC+AGG + Chr2:14407506-14407525 None:intergenic 40.0%
AGGACATATCAAGTACTCTC+CGG + Chr2:14405152-14405171 None:intergenic 40.0%
ATCGATGCCATCTGTAAATC+TGG - Chr2:14404159-14404178 MsG0280007352.01.T01:CDS 40.0%
ATCTGCCTCTTAAGAGGATA+CGG + Chr2:14404723-14404742 None:intergenic 40.0%
CAATCAGATCTGTGCTAAGT+CGG - Chr2:14404328-14404347 MsG0280007352.01.T01:intron 40.0%
CACCGATAAGAATTTGAACG+AGG - Chr2:14404446-14404465 MsG0280007352.01.T01:intron 40.0%
CGGAAAGTAATATCTTGTGC+CGG + Chr2:14407127-14407146 None:intergenic 40.0%
CTAACTCTGAATGGAGAAGA+AGG - Chr2:14407271-14407290 MsG0280007352.01.T01:intron 40.0%
CTAAGTAGCTAAACATGTGG+AGG - Chr2:14406553-14406572 MsG0280007352.01.T01:intron 40.0%
CTCCTAAACTAGTGCTTTCA+GGG + Chr2:14407243-14407262 None:intergenic 40.0%
GAAAAATGGCCATTGCTGAA+AGG + Chr2:14405690-14405709 None:intergenic 40.0%
GACAAAATCTGCCTCTTAAG+AGG + Chr2:14404729-14404748 None:intergenic 40.0%
GACAACGTTAAGAAGTTCCA+AGG + Chr2:14404751-14404770 None:intergenic 40.0%
GGAACACTGAAGCTGAAAAA+TGG + Chr2:14405704-14405723 None:intergenic 40.0%
GGAACTTCTTAACGTTGTCA+TGG - Chr2:14404752-14404771 MsG0280007352.01.T01:CDS 40.0%
GGACACATAAAAAATGACCG+TGG + Chr2:14405053-14405072 None:intergenic 40.0%
GGTCAGCATCATTAAGTCAA+TGG - Chr2:14407168-14407187 MsG0280007352.01.T01:intron 40.0%
TCATTAAGTCAATGGGAGCT+TGG - Chr2:14407176-14407195 MsG0280007352.01.T01:intron 40.0%
TCTCCTAAACTAGTGCTTTC+AGG + Chr2:14407244-14407263 None:intergenic 40.0%
TCTTTGAACGGATACATCCA+TGG + Chr2:14404402-14404421 None:intergenic 40.0%
TGAAAGGAAGCAGAGAGAAT+TGG - Chr2:14406206-14406225 MsG0280007352.01.T01:intron 40.0%
TGAATCCATAATCGGAGCAT+CGG + Chr2:14407545-14407564 None:intergenic 40.0%
TGGACTTTGGTGAAGCTATA+CGG - Chr2:14407855-14407874 MsG0280007352.01.T01:CDS 40.0%
TGGATATTGGCAGCTCAATA+TGG - Chr2:14404772-14404791 MsG0280007352.01.T01:CDS 40.0%
TGTTATAATGTCTACCTCGG+TGG - Chr2:14404293-14404312 MsG0280007352.01.T01:intron 40.0%
TTCAACAACCTTAGCGTAAG+AGG + Chr2:14404052-14404071 None:intergenic 40.0%
! AACTTCAAAGGGATGGACTT+TGG - Chr2:14407842-14407861 MsG0280007352.01.T01:CDS 40.0%
! ACATGAATCAGTGAAGTGCT+TGG - Chr2:14407147-14407166 MsG0280007352.01.T01:intron 40.0%
! AGCTATACGGGTTTTTCTTC+AGG - Chr2:14407868-14407887 MsG0280007352.01.T01:CDS 40.0%
! CAAGATTGGTGACTATTTGG+GGG - Chr2:14407769-14407788 MsG0280007352.01.T01:CDS 40.0%
! CCAAGATTGGTGACTATTTG+GGG - Chr2:14407768-14407787 MsG0280007352.01.T01:CDS 40.0%
! GAAAACAATGGTGACGATCT+GGG + Chr2:14404360-14404379 None:intergenic 40.0%
! GCCAAGATTGGTGACTATTT+GGG - Chr2:14407767-14407786 MsG0280007352.01.T01:CDS 40.0%
! GCTATACGGGTTTTTCTTCA+GGG - Chr2:14407869-14407888 MsG0280007352.01.T01:intron 40.0%
! GGGTTTTTCTTCAGGGATTT+AGG - Chr2:14407876-14407895 MsG0280007352.01.T01:intron 40.0%
! TAAGAGGCAGATTTTGTCCT+TGG - Chr2:14404731-14404750 MsG0280007352.01.T01:CDS 40.0%
! TCAATTTTCTGTGCTTCACC+AGG + Chr2:14407905-14407924 None:intergenic 40.0%
! TGAAAACAATGGTGACGATC+TGG + Chr2:14404361-14404380 None:intergenic 40.0%
!! AGCACTTCACTGATTCATGT+CGG + Chr2:14407147-14407166 None:intergenic 40.0%
!! AGCATGGGTTTTAGCCTTTT+AGG - Chr2:14406857-14406876 MsG0280007352.01.T01:intron 40.0%
!! GCATGGGTTTTAGCCTTTTA+GGG - Chr2:14406858-14406877 MsG0280007352.01.T01:intron 40.0%
!! GTAGTCTTATTTCCTTCTCG+TGG - Chr2:14406610-14406629 MsG0280007352.01.T01:intron 40.0%
!! GTCCATCCCTTTGAAGTTAA+AGG + Chr2:14407840-14407859 None:intergenic 40.0%
!! TGATTCTCCCTGCTTTTCTT+TGG - Chr2:14405107-14405126 MsG0280007352.01.T01:intron 40.0%
!! TTGGGTATTTCTAGGTTGAG+AGG + Chr2:14404538-14404557 None:intergenic 40.0%
!!! TGGCTTTGAGATGGTTTTGT+TGG + Chr2:14405033-14405052 None:intergenic 40.0%
AAGTACTCGGAGGATAAGCA+TGG + Chr2:14405792-14405811 None:intergenic 45.0%
ACTTGTTTGGACGTTGACAG+GGG + Chr2:14404571-14404590 None:intergenic 45.0%
AGAACATTCCAAGTACTCGG+AGG + Chr2:14405802-14405821 None:intergenic 45.0%
AGATCATCAAGAATGCCGCA+TGG - Chr2:14403868-14403887 MsG0280007352.01.T01:CDS 45.0%
AGATTCGAGCTTATCGATGG+TGG + Chr2:14403928-14403947 None:intergenic 45.0%
AGGAAGGGATGCCTAAAAAG+GGG + Chr2:14403984-14404003 None:intergenic 45.0%
AGTACTCGGAGGATAAGCAT+GGG + Chr2:14405791-14405810 None:intergenic 45.0%
ATCAGAATCATCGCGGCATT+CGG + Chr2:14403955-14403974 None:intergenic 45.0%
ATGCTTATCCTCCGAGTACT+TGG - Chr2:14405791-14405810 MsG0280007352.01.T01:intron 45.0%
CAATATGGCGCAACAATGAG+AGG - Chr2:14404787-14404806 MsG0280007352.01.T01:CDS 45.0%
CACAGAGTAAGCAAGAACGT+AGG + Chr2:14407999-14408018 None:intergenic 45.0%
CACTTGTTTGGACGTTGACA+GGG + Chr2:14404572-14404591 None:intergenic 45.0%
CCCCAAATAGTCACCAATCT+TGG + Chr2:14407771-14407790 None:intergenic 45.0%
CGACTTAGCACAGATCTGAT+TGG + Chr2:14404330-14404349 None:intergenic 45.0%
CTACTACCACTTCCATCATC+GGG + Chr2:14404616-14404635 None:intergenic 45.0%
CTCCACGGATAAGAATGCAA+GGG + Chr2:14404247-14404266 None:intergenic 45.0%
CTCGACTCTGGTGAAAACAA+TGG + Chr2:14404372-14404391 None:intergenic 45.0%
CTGCACTGCTGAAAGAACTA+GGG + Chr2:14407970-14407989 None:intergenic 45.0%
CTTAGCGTAAGAGGAGTCAA+GGG + Chr2:14404043-14404062 None:intergenic 45.0%
GAATAGTGCCCTTTCAGCAA+TGG - Chr2:14405678-14405697 MsG0280007352.01.T01:intron 45.0%
GAGAGATTCGAGCTTATCGA+TGG + Chr2:14403931-14403950 None:intergenic 45.0%
GAGAGTCAGCTAACTCTGAA+TGG - Chr2:14407262-14407281 MsG0280007352.01.T01:intron 45.0%
GAGGAAGGGATGCCTAAAAA+GGG + Chr2:14403985-14404004 None:intergenic 45.0%
GATGCCATCTGTAAATCTGG+TGG - Chr2:14404162-14404181 MsG0280007352.01.T01:CDS 45.0%
GGACATATCAAGTACTCTCC+GGG + Chr2:14405151-14405170 None:intergenic 45.0%
GGACTTTGGTGAAGCTATAC+GGG - Chr2:14407856-14407875 MsG0280007352.01.T01:CDS 45.0%
GGCATATAAAGCTGAGCTTC+AGG - Chr2:14407369-14407388 MsG0280007352.01.T01:intron 45.0%
GGGATCTAACAGCTGAAAGA+AGG + Chr2:14404226-14404245 None:intergenic 45.0%
GGTGGTATCATCCACTTGTT+TGG + Chr2:14404584-14404603 None:intergenic 45.0%
TAAGTCAATGGGAGCTTGGA+TGG - Chr2:14407180-14407199 MsG0280007352.01.T01:intron 45.0%
TACATGGTGCAGGTTCTCAA+TGG - Chr2:14405622-14405641 MsG0280007352.01.T01:intron 45.0%
TCCACGGATAAGAATGCAAG+GGG + Chr2:14404246-14404265 None:intergenic 45.0%
TCTCCACGGATAAGAATGCA+AGG + Chr2:14404248-14404267 None:intergenic 45.0%
TCTGAACGAGACAATCTCCA+CGG + Chr2:14404262-14404281 None:intergenic 45.0%
TCTGCACTGCTGAAAGAACT+AGG + Chr2:14407971-14407990 None:intergenic 45.0%
TGGTAGTTCTCCAGAAGAAG+TGG - Chr2:14407709-14407728 MsG0280007352.01.T01:CDS 45.0%
TGGTGACTATTTGGGGGAAA+GGG - Chr2:14407775-14407794 MsG0280007352.01.T01:CDS 45.0%
TTAAGAGGATACGGTCGTCA+GGG + Chr2:14404714-14404733 None:intergenic 45.0%
TTCTGCAGCATTCTTTCGCA+TGG + Chr2:14406439-14406458 None:intergenic 45.0%
TTGAGAATGCTTACGCCATG+CGG + Chr2:14403886-14403905 None:intergenic 45.0%
TTGTTTGGAGGAGAATGGCA+CGG - Chr2:14406823-14406842 MsG0280007352.01.T01:intron 45.0%
! AAGGACATATTCAGCATCGG+AGG + Chr2:14404004-14404023 None:intergenic 45.0%
! ACATATTCAGCATCGGAGGA+AGG + Chr2:14404000-14404019 None:intergenic 45.0%
! CATATTCAGCATCGGAGGAA+GGG + Chr2:14403999-14404018 None:intergenic 45.0%
! CATTGTTTTCACCAGAGTCG+AGG - Chr2:14404370-14404389 MsG0280007352.01.T01:intron 45.0%
! GAAGCTCAGCTTTATATGCC+CGG + Chr2:14407369-14407388 None:intergenic 45.0%
! GAATCCATAATCGGAGCATC+GGG + Chr2:14407544-14407563 None:intergenic 45.0%
! GGCCAAGATTGGTGACTATT+TGG - Chr2:14407766-14407785 MsG0280007352.01.T01:CDS 45.0%
! TTGGTGACTATTTGGGGGAA+AGG - Chr2:14407774-14407793 MsG0280007352.01.T01:CDS 45.0%
! TTTGGTGTGTTTAGTCGGAG+TGG - Chr2:14405267-14405286 MsG0280007352.01.T01:intron 45.0%
!! AAATGACCGTGGCTTTGAGA+TGG + Chr2:14405042-14405061 None:intergenic 45.0%
!! AATCCATAATCGGAGCATCG+GGG + Chr2:14407543-14407562 None:intergenic 45.0%
!! AGCCCTGAAAGCACTAGTTT+AGG - Chr2:14407238-14407257 MsG0280007352.01.T01:intron 45.0%
!! CTTATCGATGGTGGATTTGC+AGG + Chr2:14403919-14403938 None:intergenic 45.0%
!!! TGGAGCGACTTTGGTTTTCT+TGG - Chr2:14405178-14405197 MsG0280007352.01.T01:CDS 45.0%
ACGGTTGGAAGCAGTAGCAT+GGG - Chr2:14406842-14406861 MsG0280007352.01.T01:intron 50.0%
AGCTGCAATCTACCACGAGA+AGG + Chr2:14406625-14406644 None:intergenic 50.0%
AGGAACAGAGCCACTTCTTC+TGG + Chr2:14407722-14407741 None:intergenic 50.0%
CAGCTGAAAGAAGGACTCTG+AGG + Chr2:14404217-14404236 None:intergenic 50.0%
CAGGCCACCAGATTTACAGA+TGG + Chr2:14404169-14404188 None:intergenic 50.0%
CATCTGTAAATCTGGTGGCC+TGG - Chr2:14404167-14404186 MsG0280007352.01.T01:CDS 50.0%
CCACTTGTTTGGACGTTGAC+AGG + Chr2:14404573-14404592 None:intergenic 50.0%
CCTGTCAACGTCCAAACAAG+TGG - Chr2:14404570-14404589 MsG0280007352.01.T01:CDS 50.0%
CCTTAGCGTAAGAGGAGTCA+AGG + Chr2:14404044-14404063 None:intergenic 50.0%
CCTTGACTCCTCTTACGCTA+AGG - Chr2:14404041-14404060 MsG0280007352.01.T01:CDS 50.0%
CTTAAGAGGATACGGTCGTC+AGG + Chr2:14404715-14404734 None:intergenic 50.0%
GACAGGGGTGGTTTAGCATT+GGG + Chr2:14404556-14404575 None:intergenic 50.0%
GACGACCGTATCCTCTTAAG+AGG - Chr2:14404715-14404734 MsG0280007352.01.T01:CDS 50.0%
GAGCTTGGATGGACCAGATA+AGG - Chr2:14407191-14407210 MsG0280007352.01.T01:intron 50.0%
GCTCTGTTCCTGAAGAACAC+CGG - Chr2:14407731-14407750 MsG0280007352.01.T01:CDS 50.0%
GGAGGAAGGGATGCCTAAAA+AGG + Chr2:14403986-14404005 None:intergenic 50.0%
GTCGACCACATCTTTGTCTC+CGG - Chr2:14407105-14407124 MsG0280007352.01.T01:intron 50.0%
GTCTACCTCGGTGGAGTTAA+CGG - Chr2:14404302-14404321 MsG0280007352.01.T01:intron 50.0%
TCCCCTTGCATTCTTATCCG+TGG - Chr2:14404242-14404261 MsG0280007352.01.T01:intron 50.0%
TGACAGGGGTGGTTTAGCAT+TGG + Chr2:14404557-14404576 None:intergenic 50.0%
TTGTGCCGGAGACAAAGATG+TGG + Chr2:14407113-14407132 None:intergenic 50.0%
! ACGGCCTTCTGAAAACTGCT+CGG - Chr2:14407069-14407088 MsG0280007352.01.T01:intron 50.0%
!! CTTCAGGGATTTAGGTTGCC+TGG - Chr2:14407884-14407903 MsG0280007352.01.T01:intron 50.0%
!! TCAAGTCTCCTGGCCTTATC+TGG + Chr2:14407207-14407226 None:intergenic 50.0%
!!! AGTTTTTGGGTACAGGGCGT+TGG - Chr2:14406696-14406715 MsG0280007352.01.T01:intron 50.0%
!!! GTTTTTGGGTACAGGGCGTT+GGG - Chr2:14406697-14406716 MsG0280007352.01.T01:intron 50.0%
AAACTGCTCGGGACCACCTA+CGG - Chr2:14407081-14407100 MsG0280007352.01.T01:intron 55.0%
AAAGATGTGGTCGACCCCGT+AGG + Chr2:14407100-14407119 None:intergenic 55.0%
AACTCGATTGCCTCTTCGCC+AGG + Chr2:14404188-14404207 None:intergenic 55.0%
AATCCCTGGGAGGTCCTTCA+CGG - Chr2:14403814-14403833 MsG0280007352.01.T01:CDS 55.0%
ATGTCGGCATCGCAATCCCT+GGG - Chr2:14403801-14403820 MsG0280007352.01.T01:CDS 55.0%
CACCAATCTTGGCCTCGTCA+AGG + Chr2:14407760-14407779 None:intergenic 55.0%
CACGGTTGGAAGCAGTAGCA+TGG - Chr2:14406841-14406860 MsG0280007352.01.T01:intron 55.0%
CAGAGTCGAGGAAGACTCCA+TGG - Chr2:14404382-14404401 MsG0280007352.01.T01:intron 55.0%
CATGGAGTCTTCCTCGACTC+TGG + Chr2:14404384-14404403 None:intergenic 55.0%
CCAAAGTCGCTCCAGAGTGA+AGG + Chr2:14405172-14405191 None:intergenic 55.0%
CTGTTCCTGAAGAACACCGG+TGG - Chr2:14407734-14407753 MsG0280007352.01.T01:CDS 55.0%
GAGGTCATTGAGGCCACTCA+GGG - Chr2:14404505-14404524 MsG0280007352.01.T01:CDS 55.0%
GGCGAAGAGGCAATCGAGTT+GGG - Chr2:14404188-14404207 MsG0280007352.01.T01:CDS 55.0%
GTGAATCGATGATCTCGCCG+CGG + Chr2:14404119-14404138 None:intergenic 55.0%
GTGGATGATACCACCGAACC+TGG - Chr2:14404589-14404608 MsG0280007352.01.T01:CDS 55.0%
TCCATCATCGGGTCCAGGTT+CGG + Chr2:14404605-14404624 None:intergenic 55.0%
TCTCCCCGATGCTCCGATTA+TGG - Chr2:14407537-14407556 MsG0280007352.01.T01:CDS 55.0%
TGAGGTCATTGAGGCCACTC+AGG - Chr2:14404504-14404523 MsG0280007352.01.T01:CDS 55.0%
TGGATGGACCAGATAAGGCC+AGG - Chr2:14407196-14407215 MsG0280007352.01.T01:intron 55.0%
TGGCGAAGAGGCAATCGAGT+TGG - Chr2:14404187-14404206 MsG0280007352.01.T01:CDS 55.0%
TGGTTCCGTTAACTCCACCG+AGG + Chr2:14404310-14404329 None:intergenic 55.0%
TGTTTGGACGTTGACAGGGG+TGG + Chr2:14404568-14404587 None:intergenic 55.0%
TTGGAGGAGAATGGCACGGT+TGG - Chr2:14406827-14406846 MsG0280007352.01.T01:intron 55.0%
! CGGCCTTCTGAAAACTGCTC+GGG - Chr2:14407070-14407089 MsG0280007352.01.T01:intron 55.0%
! CTCTCTCTAGGTCTTGTCCG+CGG - Chr2:14404099-14404118 MsG0280007352.01.T01:CDS 55.0%
! GGTCCCGAGCAGTTTTCAGA+AGG + Chr2:14407076-14407095 None:intergenic 55.0%
!! CCTTCACTCTGGAGCGACTT+TGG - Chr2:14405169-14405188 MsG0280007352.01.T01:CDS 55.0%
AACTGCTCGGGACCACCTAC+GGG - Chr2:14407082-14407101 MsG0280007352.01.T01:intron 60.0%
AATCTGGTGGCCTGGCGAAG+AGG - Chr2:14404175-14404194 MsG0280007352.01.T01:CDS 60.0%
ACACCGTGAAGGACCTCCCA+GGG + Chr2:14403820-14403839 None:intergenic 60.0%
ACCACTCTGCCACACCGTGA+AGG + Chr2:14403831-14403850 None:intergenic 60.0%
ACCGAACCTGGACCCGATGA+TGG - Chr2:14404601-14404620 MsG0280007352.01.T01:CDS 60.0%
ATCATCGGGTCCAGGTTCGG+TGG + Chr2:14404602-14404621 None:intergenic 60.0%
CAAGGCCACCGGTGTTCTTC+AGG + Chr2:14407742-14407761 None:intergenic 60.0%
CCACTTCCATCATCGGGTCC+AGG + Chr2:14404610-14404629 None:intergenic 60.0%
CGTAAGAGGAGTCAAGGGCG+AGG + Chr2:14404038-14404057 None:intergenic 60.0%
CTGCCACATTAGAGCAGCGC+CGG - Chr2:14407347-14407366 MsG0280007352.01.T01:intron 60.0%
GAGAGGAACACCACCCTGAG+TGG + Chr2:14404521-14404540 None:intergenic 60.0%
GAGTCAAGGGCGAGGAAGAG+AGG + Chr2:14404030-14404049 None:intergenic 60.0%
GGCCTTGACGAGGCCAAGAT+TGG - Chr2:14407755-14407774 MsG0280007352.01.T01:CDS 60.0%
GGGCGAGGAAGAGAGGTTGA+AGG + Chr2:14404023-14404042 None:intergenic 60.0%
GTCATTGAGGCCACTCAGGG+TGG - Chr2:14404508-14404527 MsG0280007352.01.T01:CDS 60.0%
TCACGGTGTGGCAGAGTGGT+GGG - Chr2:14403831-14403850 MsG0280007352.01.T01:CDS 60.0%
TCCTTCACGGTGTGGCAGAG+TGG - Chr2:14403827-14403846 MsG0280007352.01.T01:CDS 60.0%
TGCCACATTAGAGCAGCGCC+GGG - Chr2:14407348-14407367 MsG0280007352.01.T01:intron 60.0%
TTCACGGTGTGGCAGAGTGG+TGG - Chr2:14403830-14403849 MsG0280007352.01.T01:CDS 60.0%
!! CCTGGACCCGATGATGGAAG+TGG - Chr2:14404607-14404626 MsG0280007352.01.T01:CDS 60.0%
!! TTGGGTACAGGGCGTTGGGT+AGG - Chr2:14406701-14406720 MsG0280007352.01.T01:intron 60.0%
ACTGCTCGGGACCACCTACG+GGG - Chr2:14407083-14407102 MsG0280007352.01.T01:intron 65.0%
CACACCGTGAAGGACCTCCC+AGG + Chr2:14403821-14403840 None:intergenic 65.0%
CTGGGAGGTCCTTCACGGTG+TGG - Chr2:14403819-14403838 MsG0280007352.01.T01:CDS 65.0%
CTTGGCCTCGTCAAGGCCAC+CGG + Chr2:14407753-14407772 None:intergenic 65.0%
GATGTGGTCGACCCCGTAGG+TGG + Chr2:14407097-14407116 None:intergenic 65.0%
TCGGCATCGCAATCCCTGGG+AGG - Chr2:14403804-14403823 MsG0280007352.01.T01:CDS 65.0%
TGCCCGGCGCTGCTCTAATG+TGG + Chr2:14407353-14407372 None:intergenic 65.0%
! GAACACCGGTGGCCTTGACG+AGG - Chr2:14407745-14407764 MsG0280007352.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 14403801 14408078 14403801 ID=MsG0280007352.01;Name=MsG0280007352.01
Chr2 mRNA 14403801 14408078 14403801 ID=MsG0280007352.01.T01;Parent=MsG0280007352.01;Name=MsG0280007352.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0|0|0.66|1|1|6|0|491
Chr2 exon 14407988 14408078 14407988 ID=MsG0280007352.01.T01:exon:52518;Parent=MsG0280007352.01.T01
Chr2 exon 14407411 14407887 14407411 ID=MsG0280007352.01.T01:exon:52517;Parent=MsG0280007352.01.T01
Chr2 exon 14405679 14405706 14405679 ID=MsG0280007352.01.T01:exon:52516;Parent=MsG0280007352.01.T01
Chr2 exon 14405132 14405243 14405132 ID=MsG0280007352.01.T01:exon:52515;Parent=MsG0280007352.01.T01
Chr2 exon 14404489 14404818 14404489 ID=MsG0280007352.01.T01:exon:52514;Parent=MsG0280007352.01.T01
Chr2 exon 14403801 14404238 14403801 ID=MsG0280007352.01.T01:exon:52513;Parent=MsG0280007352.01.T01
Chr2 CDS 14407988 14408078 14407988 ID=MsG0280007352.01.T01:cds;Parent=MsG0280007352.01.T01
Chr2 CDS 14407411 14407887 14407411 ID=MsG0280007352.01.T01:cds;Parent=MsG0280007352.01.T01
Chr2 CDS 14405679 14405706 14405679 ID=MsG0280007352.01.T01:cds;Parent=MsG0280007352.01.T01
Chr2 CDS 14405132 14405243 14405132 ID=MsG0280007352.01.T01:cds;Parent=MsG0280007352.01.T01
Chr2 CDS 14404489 14404818 14404489 ID=MsG0280007352.01.T01:cds;Parent=MsG0280007352.01.T01
Chr2 CDS 14403801 14404238 14403801 ID=MsG0280007352.01.T01:cds;Parent=MsG0280007352.01.T01
Gene Sequence

>MsG0280007352.01.T01

ATGTCGGCATCGCAATCCCTGGGAGGTCCTTCACGGTGTGGCAGAGTGGTGGGTCCATCACTCGATAAGATCATCAAGAATGCCGCATGGCGCATCCCTTCCTCCGATGCTGAATATGTCCTTCAACCTCTCTTCCTCGCCCTTGACTCCTCTTACGCTAAGGTTGTTGAAACTGCTCTCGATTGCACCTTTAAGCTTCTCTCTCTAGGTCTTGTCCGCGGCGAGATCATCGATTCACAACACTTGTTCTTCAATATCATCGATGCCATCTGTAAATCTGGTGGCCTGGCGAAGAGGCAATCGAGTTGGGCATCCTCAGAGTCCTTCTTTCAGCTGTTAGATCCCCTTGCATTCTTATCCGTGGAGATTGTCTCGTTCAGATTGTTAGAACTTGTTATAATGTCTACCTCGGTGGAGTTAACGGAACCAATCAGATCTGTGCTAAGTCGGTTCTTGCCCAGATCGTCACCATTGTTTTCACCAGAGTCGAGGAAGACTCCATGGATGTATCCGTTCAAAGAGTTTGTTAATGAACTCTTGGAATTCACCGATAAGAATTTGAACGAGGAAAAGAAAGAAGAAGAAAACAGTGTGGGATTGCAGCTGATTAAGTTCAAGGAGTACTCTGGAGAATCGTATAAAATTAAGCTAATTGTAGTTTTTGGGTACAGGGCGTTGGGTAGGAGCAATTGTTTGAGTGTGTTTGGTGATAGTCAACGGCCTTCTGAAAACTGCTCGGGACCACCTACGGGGTCGACCACATCTTTGTCTCCGGCACAAGATATTACTTTCCGACATGAATCAGTGAAGTGCTTGGTCAGCATCATTAAGTCAATGGGAGCTTGGATGGACCAGATAAGGCCAGGAGACTTGAATCTTGTAAAGAGCCCTGAAAGCACTAGTTTAGGAGAGAGTCAGCTAACTCTGAATGGAGAAGAAGGAAACGCTTCTGATCTTGAGCTACATCCCGATATAAATTCTGAATTCTCAGATGCTGCCACATTAGAGCAGCGCCGGGCATATAAAGCTGAGCTTCAGAAAGGTATATCTCTTTTTAATAGAAAACCTTCCAAGGGTATTGAATTCTTGATAAGCAACAAAAAAGTTGGTAGTTCTCCAGAAGAAGTGGCTCTGTTCCTGAAGAACACCGGTGGCCTTGACGAGGCCAAGATTGGTGACTATTTGGGGGAAAGGGAAGATTTTTCTCTAAAAGTTATGCATGCTTATGTAGATTCCTTTAACTTCAAAGGGATGGACTTTGGTGAAGCTATACGGGTTTTTCTTCAGGGATTTAGGTTGCCTGGTGAAGCACAGAAAATTGATCGCATTATGGAGAAATTTGCTGAGCGCTTTTGTAAATGCAACCCTAGTTCTTTCAGCAGTGCAGATACAGCCTACGTTCTTGCTTACTCTGTGATAATGCTCAATACCGACGCTCATAATAATATGGTGAAAGATAAGGTTTGCCCTAACTGA
Protein sequence

>MsG0280007352.01.T01

MSASQSLGGPSRCGRVVGPSLDKIIKNAAWRIPSSDAEYVLQPLFLALDSSYAKVVETALDCTFKLLSLGLVRGEIIDSQHLFFNIIDAICKSGGLAKRQSSWASSESFFQLLDPLAFLSVEIVSFRLLELVIMSTSVELTEPIRSVLSRFLPRSSPLFSPESRKTPWMYPFKEFVNELLEFTDKNLNEEKKEEENSVGLQLIKFKEYSGESYKIKLIVVFGYRALGRSNCLSVFGDSQRPSENCSGPPTGSTTSLSPAQDITFRHESVKCLVSIIKSMGAWMDQIRPGDLNLVKSPESTSLGESQLTLNGEEGNASDLELHPDINSEFSDAATLEQRRAYKAELQKGISLFNRKPSKGIEFLISNKKVGSSPEEVALFLKNTGGLDEAKIGDYLGEREDFSLKVMHAYVDSFNFKGMDFGEAIRVFLQGFRLPGEAQKIDRIMEKFAERFCKCNPSSFSSADTAYVLAYSVIMLNTDAHNNMVKDKVCPN*