AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008240.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008240.01.T01 MTR_2g036920 86.335 966 79 5 1 952 1 927 0.0 1494
MsG0280008240.01.T01 MTR_2g036920 83.230 966 80 6 1 952 1 898 0.0 1419
MsG0280008240.01.T01 MTR_4g127620 54.461 538 188 13 425 946 237 733 4.96e-166 503
MsG0280008240.01.T01 MTR_4g127620 65.625 160 51 3 210 367 102 259 7.15e-55 204
MsG0280008240.01.T01 MTR_4g127620 42.731 227 91 7 1 227 1 188 1.49e-40 160
MsG0280008240.01.T01 MTR_8g091250 39.437 284 158 4 582 864 345 615 9.57e-51 191
MsG0280008240.01.T01 MTR_5g098980 36.196 326 173 9 549 861 363 666 2.70e-48 185
MsG0280008240.01.T01 MTR_5g087740 37.011 281 160 5 608 883 416 684 1.21e-46 180
MsG0280008240.01.T01 MTR_5g087740 38.889 72 44 0 1 72 1 72 6.29e-11 67.0
MsG0280008240.01.T01 MTR_1g112850 36.093 302 173 7 570 864 318 606 7.52e-44 171
MsG0280008240.01.T01 MTR_3g088190 40.574 244 130 5 624 864 551 782 1.88e-43 171
MsG0280008240.01.T01 MTR_3g078830 30.471 361 229 6 598 952 422 766 4.65e-43 169
MsG0280008240.01.T01 MTR_3g078830 42.424 66 38 0 1 66 1 66 8.08e-12 69.7
MsG0280008240.01.T01 MTR_3g115120 31.469 286 176 6 624 905 363 632 1.57e-34 142
MsG0280008240.01.T01 MTR_5g022530 31.200 250 146 6 620 864 292 520 5.00e-31 130
MsG0280008240.01.T01 MTR_2g102050 31.837 245 154 5 621 864 401 633 4.32e-30 128
MsG0280008240.01.T01 MTR_2g102050 50.847 59 29 0 1 59 1 59 5.40e-12 70.5
MsG0280008240.01.T01 MTR_3g096950 29.740 269 154 5 598 861 417 655 8.55e-30 127
MsG0280008240.01.T01 MTR_4g012430 31.818 242 145 5 624 864 208 430 5.04e-26 114
MsG0280008240.01.T01 MTR_3g109450 28.889 270 177 4 596 864 333 588 1.73e-25 113
MsG0280008240.01.T01 MTR_8g006850 39.106 179 97 4 624 800 364 532 1.12e-23 107
MsG0280008240.01.T01 MTR_7g081705 36.517 178 101 3 624 800 492 658 3.64e-23 106
MsG0280008240.01.T01 MTR_2g048360 30.405 296 174 8 582 868 250 522 3.90e-23 105
MsG0280008240.01.T01 MTR_1g107440 48.750 80 40 1 618 696 2 81 4.10e-18 81.3
MsG0280008240.01.T01 MTR_4g094688 49.412 85 41 1 634 718 935 1017 1.78e-14 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008240.01.T01 AT2G19090 62.766 376 127 7 570 937 427 797 1.32e-127 405
MsG0280008240.01.T01 AT2G19090 54.861 144 48 7 212 340 118 259 5.92e-33 137
MsG0280008240.01.T01 AT2G19090 62.500 80 29 1 1 79 1 80 1.94e-22 104
MsG0280008240.01.T01 AT4G30130 57.600 375 146 5 569 935 343 712 7.21e-115 369
MsG0280008240.01.T01 AT4G30130 36.975 238 78 9 1 228 1 176 2.62e-30 129
MsG0280008240.01.T01 AT4G30130 48.344 151 54 7 199 342 84 217 3.34e-23 106
MsG0280008240.01.T01 AT4G30130 57.600 375 146 5 569 935 343 712 7.21e-115 369
MsG0280008240.01.T01 AT4G30130 36.975 238 78 9 1 228 1 176 2.62e-30 129
MsG0280008240.01.T01 AT4G30130 48.344 151 54 7 199 342 84 217 3.34e-23 106
MsG0280008240.01.T01 AT1G77500 36.242 298 168 6 574 864 493 775 1.59e-48 187
MsG0280008240.01.T01 AT4G35240 39.405 269 147 6 610 875 492 747 1.07e-47 184
MsG0280008240.01.T01 AT4G35240 39.405 269 147 6 610 875 492 747 1.07e-47 184
MsG0280008240.01.T01 AT4G35240 39.405 269 147 6 610 875 492 747 1.50e-47 183
MsG0280008240.01.T01 AT4G35240 39.405 269 147 6 610 875 492 747 1.50e-47 183
MsG0280008240.01.T01 AT1G21740 39.200 250 137 5 618 864 586 823 2.83e-45 177
MsG0280008240.01.T01 AT2G27090 35.943 281 164 5 610 887 414 681 9.34e-45 174
MsG0280008240.01.T01 AT2G27090 40.909 66 39 0 1 66 1 66 1.99e-11 68.6
MsG0280008240.01.T01 AT2G27090 35.943 281 164 5 610 887 414 681 9.34e-45 174
MsG0280008240.01.T01 AT2G27090 40.909 66 39 0 1 66 1 66 1.99e-11 68.6
MsG0280008240.01.T01 AT4G39790 42.735 234 119 4 605 835 356 577 1.54e-44 172
MsG0280008240.01.T01 AT4G39790 42.105 76 41 1 1 73 9 84 9.38e-11 66.2
MsG0280008240.01.T01 AT2G17110 32.070 343 201 7 610 935 389 716 1.95e-42 166
MsG0280008240.01.T01 AT2G17110 29.299 157 82 3 1 145 1 140 1.64e-11 68.9
MsG0280008240.01.T01 AT1G20530 39.367 221 108 5 624 839 310 509 2.49e-37 149
MsG0280008240.01.T01 AT4G30130 64.935 154 50 2 569 718 343 496 3.25e-36 145
MsG0280008240.01.T01 AT4G30130 36.975 238 78 9 1 228 1 176 8.61e-31 129
MsG0280008240.01.T01 AT4G30130 49.306 144 50 6 199 336 84 210 2.02e-23 106
MsG0280008240.01.T01 AT4G30130 64.935 154 50 2 569 718 343 496 3.25e-36 145
MsG0280008240.01.T01 AT4G30130 36.975 238 78 9 1 228 1 176 8.61e-31 129
MsG0280008240.01.T01 AT4G30130 49.306 144 50 6 199 336 84 210 2.02e-23 106
MsG0280008240.01.T01 AT3G51290 34.848 264 143 8 618 873 285 527 5.74e-36 145
MsG0280008240.01.T01 AT3G51290 34.848 264 143 8 618 873 285 527 1.57e-35 145
MsG0280008240.01.T01 AT3G51290 33.712 264 140 9 618 873 285 521 1.17e-31 132
MsG0280008240.01.T01 AT5G25590 32.234 273 164 7 596 864 387 642 6.77e-29 124
MsG0280008240.01.T01 AT5G25590 45.714 70 37 1 1 70 1 69 7.96e-11 66.6
MsG0280008240.01.T01 AT5G54480 28.000 275 170 5 618 888 394 644 1.15e-26 117
MsG0280008240.01.T01 AT1G52320 29.771 262 168 6 604 864 90 336 2.76e-26 114
MsG0280008240.01.T01 AT1G52320 29.771 262 168 6 604 864 90 336 2.76e-26 114
MsG0280008240.01.T01 AT1G52320 30.612 245 157 5 621 864 407 639 3.02e-26 116
MsG0280008240.01.T01 AT1G52320 30.612 245 157 5 621 864 430 662 3.74e-26 116
MsG0280008240.01.T01 AT1G52320 30.612 245 157 5 621 864 430 662 3.74e-26 116
MsG0280008240.01.T01 AT1G02110 32.685 257 149 6 624 875 358 595 7.42e-24 108
MsG0280008240.01.T01 AT3G60320 38.298 188 95 4 619 800 437 609 4.15e-23 106
MsG0280008240.01.T01 AT2G34670 28.440 327 207 8 545 864 254 560 2.53e-19 94.0
MsG0280008240.01.T01 AT2G34670 28.659 328 207 8 545 865 254 561 3.94e-19 92.8

Find 230 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATAATTCGGACGGTTTC+AGG 0.126913 2:+27663224 None:intergenic
GAGGAACATTGTAGGCTTTC+TGG 0.137982 2:-27661678 MsG0280008240.01.T01:CDS
GAATTAACTCGGACGGTTTC+GGG 0.153556 2:+27663137 None:intergenic
CTTCGAGAATGAATTATTAT+TGG 0.179948 2:-27663031 MsG0280008240.01.T01:CDS
TGAATTAACTCGGACGGTTT+CGG 0.190115 2:+27663136 None:intergenic
ATGCTCAATGGGATTTCTTT+TGG 0.209781 2:-27662809 MsG0280008240.01.T01:CDS
GTTTCAATTCGGACGGTTTC+GGG 0.212743 2:+27662963 None:intergenic
AATTCAGGAATGAATTATTA+TGG 0.213635 2:-27663119 MsG0280008240.01.T01:CDS
CGTTTCAATTCGGACGGTTT+CGG 0.224616 2:+27662962 None:intergenic
ACACCATCAACAATTGATTA+TGG 0.229395 2:-27663332 MsG0280008240.01.T01:CDS
GAAGTAATATGGACGGTTTC+GGG 0.230207 2:+27663050 None:intergenic
AAAATTGATTTGAACAATAA+AGG 0.234578 2:+27659259 None:intergenic
AGGTGGTAATCCAGCTATTT+TGG 0.237471 2:-27663267 MsG0280008240.01.T01:CDS
CTTTCCTCAACCGAGTTTGC+TGG 0.253555 2:+27662996 None:intergenic
TTCAACAACGACATGTTCTT+TGG 0.256459 2:+27662341 None:intergenic
TTCTTCTTCACAGGCGTAAA+AGG 0.258598 2:+27663443 None:intergenic
AATTCATTCTCGAAGTAATA+TGG 0.282991 2:+27663039 None:intergenic
CGAAGTAATATGGACGGTTT+CGG 0.306313 2:+27663049 None:intergenic
CTAAGTAACTATGAAGTAAA+AGG 0.309831 2:-27660753 MsG0280008240.01.T01:CDS
GTTCAGTTTCATCTTCTTCA+AGG 0.316568 2:+27662667 None:intergenic
TGAACAATAAGTCCGAATAA+AGG 0.320745 2:+27659767 None:intergenic
TACCAACTGCCATTTCTCTA+TGG 0.323915 2:+27662140 None:intergenic
TTCTTCTGCTACATTTCTCC+TGG 0.328818 2:+27662533 None:intergenic
CTTTCCTCAACTGAGTTTGC+TGG 0.329889 2:+27663083 None:intergenic
TTCTTCTGCCACATTTCTCC+TGG 0.331204 2:+27662485 None:intergenic
AGCGGCAGTCACCCTTTATT+CGG 0.331536 2:-27659779 MsG0280008240.01.T01:CDS
GGGGAAGGTGGAGGGATATT+AGG 0.333956 2:+27662837 None:intergenic
ATTCGGACGGTTTCGGGTGG+TGG 0.334388 2:+27662969 None:intergenic
AAGAGGAAGAAGAGGAGGAC+GGG 0.335673 2:-27662293 MsG0280008240.01.T01:CDS
AGAAGAGGAGGACGGGGAAG+AGG 0.336328 2:-27662286 MsG0280008240.01.T01:CDS
CACTGGCCGGATGGCTTCTC+CGG 0.339222 2:-27659859 MsG0280008240.01.T01:CDS
ATATCCTCAACTTCTTGAAT+TGG 0.347852 2:-27660607 MsG0280008240.01.T01:CDS
TTCATCTACTATATTTCTCC+TGG 0.350642 2:+27662389 None:intergenic
TTCTTCTGCTACATTTCTCC+TGG 0.350912 2:+27662437 None:intergenic
ATTCAGGAATGAATTATTAT+GGG 0.353757 2:-27663118 MsG0280008240.01.T01:CDS
CATATTCTCCTCCGAATGTT+AGG 0.354107 2:-27662860 MsG0280008240.01.T01:CDS
CTTTCCTCAACTGAAATTGC+TGG 0.354496 2:+27663170 None:intergenic
CTAACATTCGGAGGAGAATA+TGG 0.357042 2:+27662861 None:intergenic
GCTGACCGGGCTAGCCTGTT+TGG 0.361202 2:+27659962 None:intergenic
GAAAGACAATTTCTAGATAC+AGG 0.364520 2:+27661877 None:intergenic
TGAATCCAGTCGCTTTGTTC+CGG 0.364603 2:-27661791 MsG0280008240.01.T01:CDS
TATTCTCCAATGCAGCATTA+TGG 0.364894 2:-27662939 MsG0280008240.01.T01:CDS
AAAACAAACTGATGGGAGTA+TGG 0.365420 2:-27659615 MsG0280008240.01.T01:CDS
CCCTCAGAGTTTCGATTCTC+CGG 0.368841 2:+27660640 None:intergenic
TTTCGAGAATGAATTATCAT+AGG 0.371243 2:-27663205 MsG0280008240.01.T01:CDS
GCAAGAAGATAAGGAAGAAA+TGG 0.372980 2:-27662116 MsG0280008240.01.T01:CDS
CTTTGATATGTCATCGGGTT+CGG 0.374859 2:+27659826 None:intergenic
TTCTTCAACTACATTTCTCC+TGG 0.378569 2:+27662581 None:intergenic
AAGAATCTTAGCTTCATCTA+AGG 0.380709 2:+27660045 None:intergenic
AAATTGATTTGAACAATAAA+GGG 0.381438 2:+27659260 None:intergenic
ACTCGGACGGTTTCGGGTGA+TGG 0.382202 2:+27663143 None:intergenic
TATTCGGACTTATTGTTCAA+TGG 0.386222 2:-27659763 MsG0280008240.01.T01:CDS
AATTCATTCTCGAAATAATT+CGG 0.389393 2:+27663213 None:intergenic
TAGATTCAATGTAAGCAATA+TGG 0.390450 2:+27663549 None:intergenic
GCTCTTCGTGATTATATTGA+AGG 0.394081 2:-27663509 MsG0280008240.01.T01:CDS
GAAACCGTCCGAGTTAATTC+AGG 0.394868 2:-27663134 MsG0280008240.01.T01:CDS
AAATCAAGCTGCAGGTCATA+TGG 0.394969 2:-27662170 MsG0280008240.01.T01:CDS
AACTGCCATTTCTCTATGGC+TGG 0.413678 2:+27662144 None:intergenic
TTAACTTGTCCAATGTAGAT+TGG 0.414033 2:+27661649 None:intergenic
CTTTGAGAATGAATTATCAT+AGG 0.415708 2:-27663292 MsG0280008240.01.T01:CDS
GAACAATAAGTCCGAATAAA+GGG 0.416409 2:+27659768 None:intergenic
ATATGGACGGTTTCGGGTGG+TGG 0.417251 2:+27663056 None:intergenic
TAACTCGATTTCAAGATTTG+AGG 0.421257 2:+27659940 None:intergenic
GAAGAGGAAGAAGAGGAGGA+CGG 0.423726 2:-27662294 MsG0280008240.01.T01:CDS
CTGAGTATCTAGATCTCTAA+TGG 0.426269 2:+27660698 None:intergenic
TGGCCTTCGGTTTACGTAAA+CGG 0.427183 2:+27662084 None:intergenic
TTCCCCTCAAAATGCTCAAT+GGG 0.429377 2:-27662820 MsG0280008240.01.T01:CDS
AGAGGAAGAAGAGGAGGACG+GGG 0.433837 2:-27662292 MsG0280008240.01.T01:CDS
CAACTTCTTGAATTGGTACA+AGG 0.434037 2:-27660600 MsG0280008240.01.T01:CDS
TCAACAATTGATTATGGAGT+TGG 0.435846 2:-27663326 MsG0280008240.01.T01:CDS
GTTTCATCTTCTTCAAGGTC+CGG 0.437854 2:+27662672 None:intergenic
AAGACAGACTTCCATTTCAA+TGG 0.440323 2:-27659990 MsG0280008240.01.T01:CDS
GTTTGGATCAGCCATTGAAA+TGG 0.443625 2:+27659979 None:intergenic
CGCGAAAAGGCAGTGCTTGA+CGG 0.446888 2:-27659719 MsG0280008240.01.T01:CDS
CTTCCCCTCAAAATGCTCAA+TGG 0.447510 2:-27662821 MsG0280008240.01.T01:CDS
ACTCAGTTGAAGCTATTTCC+CGG 0.450427 2:-27660659 MsG0280008240.01.T01:CDS
TGATCGACGCTACTTCGGTT+TGG 0.451220 2:+27662753 None:intergenic
CAAATCTTGAAATCGAGTTA+AGG 0.451955 2:-27659937 MsG0280008240.01.T01:CDS
TAGTAATCCAACGACGAAAA+GGG 0.452484 2:+27662783 None:intergenic
CGGACGGTTTCGGGTGGTGG+AGG 0.455386 2:+27662972 None:intergenic
GATTCGAGAACAAACTCATA+TGG 0.463569 2:-27659641 MsG0280008240.01.T01:CDS
ATTCGGACGGTTTCAGGTGA+TGG 0.464335 2:+27663230 None:intergenic
TTTCAATGGCTGATCCAAAC+AGG 0.465416 2:-27659976 MsG0280008240.01.T01:CDS
TTGGAGAATACGTTTCAATT+CGG 0.468183 2:+27662952 None:intergenic
GACTTATTGTTCAATGGTCA+AGG 0.469749 2:-27659757 MsG0280008240.01.T01:CDS
ATAGTAATCCAACGACGAAA+AGG 0.471930 2:+27662782 None:intergenic
ACTCCATAATCAATTGTTGA+TGG 0.473711 2:+27663329 None:intergenic
TGGACGGTTTCGGGTGGTGG+AGG 0.476427 2:+27663059 None:intergenic
TTTCAAGATTTGAGGCTGAC+CGG 0.477854 2:+27659948 None:intergenic
CCATTGCCATTGCCAATCCT+AGG 0.480253 2:+27663413 None:intergenic
CACGCACCGGAGAAGCCATC+CGG 0.481149 2:+27659853 None:intergenic
GCTATTAAAGTGCTTTGTGC+TGG 0.482717 2:-27659530 MsG0280008240.01.T01:CDS
GGAATCCAGCCATAGAGAAA+TGG 0.484990 2:-27662149 MsG0280008240.01.T01:CDS
TTCAAGATTTGAGGCTGACC+GGG 0.486973 2:+27659949 None:intergenic
TTTCCTCAACCGAGTTTGCT+GGG 0.490842 2:+27662997 None:intergenic
GGAAAGTAACGAGGGAACTA+AGG 0.492997 2:-27661709 MsG0280008240.01.T01:CDS
GGTGACTTTGATATGTCATC+GGG 0.494388 2:+27659821 None:intergenic
ATATCTCAGAGGAACATTGT+AGG 0.494678 2:-27661686 MsG0280008240.01.T01:CDS
TGATGAGGAAGAGGAAGAAG+AGG 0.497557 2:-27662301 MsG0280008240.01.T01:CDS
AGAATGAATTATTATTGGCC+AGG 0.498153 2:-27663026 MsG0280008240.01.T01:CDS
CGGGGAAGAGGATGAAGAAG+AGG 0.500310 2:-27662274 MsG0280008240.01.T01:CDS
AGCTAAATGCATAATTACAT+TGG 0.502811 2:+27659318 None:intergenic
CAATGGTCAAGGCGTCTTGA+CGG 0.503704 2:-27659746 MsG0280008240.01.T01:CDS
CACTTTGATCGACGCTACTT+CGG 0.507338 2:+27662748 None:intergenic
CTGATCCAAACAGGCTAGCC+CGG 0.508209 2:-27659967 MsG0280008240.01.T01:CDS
TCTTGACGGTGTACGCGAAA+AGG 0.508736 2:-27659732 MsG0280008240.01.T01:CDS
GGAATGAATTATTATGGGCC+AGG 0.509035 2:-27663113 MsG0280008240.01.T01:CDS
CTTTCCTGAACCAAAATAGC+TGG 0.509284 2:+27663257 None:intergenic
AGTCACCATGCTCTCCTCAT+AGG 0.510064 2:-27659805 MsG0280008240.01.T01:CDS
GGGATGTTCACAATCAAAGC+TGG 0.514519 2:-27663657 MsG0280008240.01.T01:CDS
TAGTGAATTCTTCTAGCACT+AGG 0.515340 2:-27661734 MsG0280008240.01.T01:CDS
AAGAAAACTAAGCCTAGGAT+TGG 0.516510 2:-27663425 MsG0280008240.01.T01:CDS
GGCGAATCACCTTCGAGTCA+TGG 0.520003 2:-27659910 MsG0280008240.01.T01:CDS
TATGGATCAAAACAAACTGA+TGG 0.521004 2:-27659623 MsG0280008240.01.T01:CDS
TTCTGCCACATTTCTCCTGG+AGG 0.521898 2:+27662488 None:intergenic
CAAAGAACTCGGTTTGCGAC+CGG 0.524264 2:-27663572 MsG0280008240.01.T01:CDS
CCTCAGAGTTTCGATTCTCC+GGG 0.524522 2:+27660641 None:intergenic
TTGAAATCGAGTTAAGGAAC+TGG 0.528842 2:-27659931 MsG0280008240.01.T01:CDS
AGTTGGTAAGCAAGAAGATA+AGG 0.529579 2:-27662125 MsG0280008240.01.T01:CDS
TGGTGACTTTGATATGTCAT+CGG 0.531493 2:+27659820 None:intergenic
AAAGGCAGTGCTTGACGGCA+TGG 0.535249 2:-27659714 MsG0280008240.01.T01:CDS
CAATACAAAGGTAGATAGCA+AGG 0.535383 2:-27659292 MsG0280008240.01.T01:three_prime_UTR
GAAATTGCTGGATTGCCACC+TGG 0.536975 2:+27663182 None:intergenic
GTCTCAGTTGATGCGCATAG+AGG 0.537614 2:+27659666 None:intergenic
TGACGATGATGATGAGGAAG+AGG 0.538801 2:-27662310 MsG0280008240.01.T01:CDS
CCTAGGATTGGCAATGGCAA+TGG 0.539931 2:-27663413 MsG0280008240.01.T01:CDS
GCAGTGCCATAATGCTGCAT+TGG 0.540389 2:+27662933 None:intergenic
AGAATGAATTATCATAGGCC+AGG 0.541612 2:-27663287 MsG0280008240.01.T01:CDS
TAGCGTCGATCAAAGTGGTA+TGG 0.542111 2:-27662742 MsG0280008240.01.T01:CDS
AAGACCGCGAAGAAGCTGTC+CGG 0.542191 2:+27661772 None:intergenic
TTCTGCTACATTTCTCCTGG+AGG 0.544514 2:+27662440 None:intergenic
TTCTGCTACATTTCTCCTGG+AGG 0.544514 2:+27662536 None:intergenic
TGTTCCGGACAGCTTCTTCG+CGG 0.544978 2:-27661776 MsG0280008240.01.T01:CDS
ACGAGAAGAAGAGGGAATAC+CGG 0.546118 2:-27662691 MsG0280008240.01.T01:CDS
GGGATATTAGGCCTAACATT+CGG 0.547129 2:+27662849 None:intergenic
ATTGGCAATGGCAATGGCAA+TGG 0.550294 2:-27663407 MsG0280008240.01.T01:CDS
TCCTACATTCAAGCACTGGC+CGG 0.550510 2:-27659872 MsG0280008240.01.T01:CDS
AGGTGGTAACCCAGCAAACT+CGG 0.552276 2:-27663006 MsG0280008240.01.T01:CDS
AAGCAATGGAACAGTGTGAA+GGG 0.554667 2:-27659437 MsG0280008240.01.T01:CDS
GAGGCAGGTACGAGAAGAAG+AGG 0.555802 2:-27662700 MsG0280008240.01.T01:CDS
TAACCCAGCAAACTCGGTTG+AGG 0.558833 2:-27663000 MsG0280008240.01.T01:CDS
GAATTCTTCTAGCACTAGGA+TGG 0.559299 2:-27661730 MsG0280008240.01.T01:CDS
TGAAGAAGAAAACTAAGCCT+AGG 0.559683 2:-27663430 MsG0280008240.01.T01:CDS
GGGGAAGAGGATGAAGAAGA+GGG 0.565039 2:-27662273 MsG0280008240.01.T01:CDS
CAATCCAGCAATTTCAGTTG+AGG 0.567535 2:-27663174 MsG0280008240.01.T01:CDS
TGAGGAAGAGGAAGAAGAGG+AGG 0.568079 2:-27662298 MsG0280008240.01.T01:CDS
CAGCATTATGGCACTGCTGA+TGG 0.568576 2:-27662927 MsG0280008240.01.T01:CDS
CAGCAATTTCAGTTGAGGAA+AGG 0.570188 2:-27663169 MsG0280008240.01.T01:CDS
TCTCAGTTGATGCGCATAGA+GGG 0.570243 2:+27659667 None:intergenic
GCTGTCCGGAACAAAGCGAC+TGG 0.571023 2:+27661786 None:intergenic
TGTACCAATTCAAGAAGTTG+AGG 0.571028 2:+27660603 None:intergenic
GAAGCTAAGATTCTTCTAGC+TGG 0.571177 2:-27660037 MsG0280008240.01.T01:CDS
AACTGATGGGAGTATGGAAA+TGG 0.573175 2:-27659609 MsG0280008240.01.T01:CDS
GAAATGATATTAATTCCTCC+AGG 0.573258 2:-27662599 MsG0280008240.01.T01:CDS
ATTGTGAAGTTATGAAGCAA+TGG 0.573947 2:-27659451 MsG0280008240.01.T01:CDS
AGAATGAATTATCATAGGCC+AGG 0.574614 2:-27663200 MsG0280008240.01.T01:CDS
GAGTTTGCTGGGTTACCACC+TGG 0.576831 2:+27663008 None:intergenic
ACATTCAAGCACTGGCCGGA+TGG 0.577260 2:-27659868 MsG0280008240.01.T01:CDS
GGTATGGATGATGAATATAG+AGG 0.577341 2:-27662726 MsG0280008240.01.T01:CDS
AAGATCCTACATTCAAGCAC+TGG 0.577912 2:-27659876 MsG0280008240.01.T01:CDS
CGGACGGTTTCGGGTGATGG+AGG 0.577979 2:+27663146 None:intergenic
AATTCATTCCTGAATTAACT+CGG 0.579794 2:+27663126 None:intergenic
CATTCTCGAAGTAATATGGA+CGG 0.580002 2:+27663043 None:intergenic
ATGGATCAAAACAAACTGAT+GGG 0.581973 2:-27659622 MsG0280008240.01.T01:CDS
TGATGGGAGTATGGAAATGG+TGG 0.582930 2:-27659606 MsG0280008240.01.T01:CDS
CAGCAAACTCGGTTGAGGAA+AGG 0.585290 2:-27662995 MsG0280008240.01.T01:CDS
TTCTTCACAGGCGTAAAAGG+TGG 0.585997 2:+27663446 None:intergenic
GAAATGATATTAATTCCTCC+AGG 0.587321 2:-27662503 MsG0280008240.01.T01:CDS
GTAATGATATTAGTTCCTCC+AGG 0.587731 2:-27662407 MsG0280008240.01.T01:CDS
GAAATGATATTAGTTCCTCC+AGG 0.587731 2:-27662551 MsG0280008240.01.T01:CDS
CATTCCTGAATTAACTCGGA+CGG 0.589393 2:+27663130 None:intergenic
CATTCTCGAAATAATTCGGA+CGG 0.591508 2:+27663217 None:intergenic
CGAAGTAGCGTCGATCAAAG+TGG 0.591658 2:-27662747 MsG0280008240.01.T01:CDS
ATTGGACAAGTTAAATGCAT+GGG 0.595044 2:-27661640 MsG0280008240.01.T01:CDS
GAAGATAAGGAAGAAATGGC+AGG 0.595741 2:-27662112 MsG0280008240.01.T01:CDS
ATGGCAGGCTTGAAAAGATG+TGG 0.596084 2:-27660105 MsG0280008240.01.T01:intron
TCATGTGGAGGAAGATGCGA+TGG 0.597402 2:-27659576 MsG0280008240.01.T01:CDS
TCCGGCCAGTGCTTGAATGT+AGG 0.597694 2:+27659871 None:intergenic
GAGTTTGCTGGATTACCACC+TGG 0.597711 2:+27663095 None:intergenic
TGGTAGTCACCAATCTACAT+TGG 0.598002 2:-27661658 MsG0280008240.01.T01:CDS
GAAGCAATGGAACAGTGTGA+AGG 0.598062 2:-27659438 MsG0280008240.01.T01:CDS
CAGCAAACTCAGTTGAGGAA+AGG 0.601034 2:-27663082 MsG0280008240.01.T01:CDS
TGAATATAGAGGATTGAGGC+AGG 0.604054 2:-27662715 MsG0280008240.01.T01:CDS
TGACTGCCGCTTGACCTATG+AGG 0.604087 2:+27659791 None:intergenic
TTCAATGTAAGCAATATGGC+CGG 0.604648 2:+27663553 None:intergenic
CATTGGACAAGTTAAATGCA+TGG 0.605596 2:-27661641 MsG0280008240.01.T01:CDS
AGCCATAGAGAAATGGCAGT+TGG 0.607405 2:-27662142 MsG0280008240.01.T01:CDS
TCAATTCGGACGGTTTCGGG+TGG 0.609238 2:+27662966 None:intergenic
AATGGCAATGGCAATGGCAA+TGG 0.609559 2:-27663401 MsG0280008240.01.T01:CDS
AAGCTGTTGAGCAAAGAACT+CGG 0.611410 2:-27663583 MsG0280008240.01.T01:CDS
TTCAACTACATTTCTCCTGG+AGG 0.612158 2:+27662584 None:intergenic
AGTAATCCAACGACGAAAAG+GGG 0.616138 2:+27662784 None:intergenic
GAAGCTCTATGACGAAGTCA+AGG 0.618693 2:-27661613 MsG0280008240.01.T01:intron
TGCTCTCCTCATAGGTCAAG+CGG 0.619633 2:-27659797 MsG0280008240.01.T01:CDS
TATCGATGACGATGATGATG+AGG 0.621973 2:-27662316 MsG0280008240.01.T01:CDS
ATCTACTATATTTCTCCTGG+AGG 0.623615 2:+27662392 None:intergenic
AGAAGTGATCCATGACTCGA+AGG 0.623713 2:+27659901 None:intergenic
AATGGTGGAAGTCGGTCATG+TGG 0.626036 2:-27659591 MsG0280008240.01.T01:CDS
CACTAGGATGGAAAGTAACG+AGG 0.628132 2:-27661718 MsG0280008240.01.T01:CDS
ATGATGAATATAGAGGATTG+AGG 0.628758 2:-27662719 MsG0280008240.01.T01:CDS
AACTTCTTGAATTGGTACAA+GGG 0.628915 2:-27660599 MsG0280008240.01.T01:intron
AGGCAGGTACGAGAAGAAGA+GGG 0.631601 2:-27662699 MsG0280008240.01.T01:CDS
ATGAATTATTATTGGCCAGG+TGG 0.631630 2:-27663023 MsG0280008240.01.T01:CDS
AATACAAAGGTAGATAGCAA+GGG 0.632456 2:-27659291 MsG0280008240.01.T01:three_prime_UTR
AGAATACGTTTCAATTCGGA+CGG 0.632939 2:+27662956 None:intergenic
ACTAAGCCTAGGATTGGCAA+TGG 0.632948 2:-27663419 MsG0280008240.01.T01:CDS
CGGGTTCGGATCTCACGCAC+CGG 0.633608 2:+27659840 None:intergenic
TAACTATGAAGTAAAAGGAG+AGG 0.633648 2:-27660748 MsG0280008240.01.T01:CDS
CTTGACCTATGAGGAGAGCA+TGG 0.635071 2:+27659800 None:intergenic
GTAATATGGACGGTTTCGGG+TGG 0.635179 2:+27663053 None:intergenic
GGTGGAAGTCGGTCATGTGG+AGG 0.636289 2:-27659588 MsG0280008240.01.T01:CDS
CCCGGAGAATCGAAACTCTG+AGG 0.637874 2:-27660641 MsG0280008240.01.T01:CDS
AGTATGGAAATGGTGGAAGT+CGG 0.638749 2:-27659599 MsG0280008240.01.T01:CDS
AATGGCAATGACAATGGCAA+TGG 0.641044 2:-27663383 MsG0280008240.01.T01:CDS
TCGTGAGTTCTCATTAGAGT+CGG 0.641916 2:-27663477 MsG0280008240.01.T01:CDS
AAAATAGCTGGATTACCACC+TGG 0.643680 2:+27663269 None:intergenic
TAATTCCTCCAGGAGAAATG+TGG 0.644554 2:-27662493 MsG0280008240.01.T01:CDS
AATGGCAATGGCAATGACAA+TGG 0.647799 2:-27663389 MsG0280008240.01.T01:CDS
TAATCCAGCAAACTCAGTTG+AGG 0.648014 2:-27663087 MsG0280008240.01.T01:CDS
ATGAATTATTATGGGCCAGG+TGG 0.653171 2:-27663110 MsG0280008240.01.T01:CDS
CCGGAGAATCGAAACTCTGA+GGG 0.654144 2:-27660640 MsG0280008240.01.T01:CDS
CATTTAGCTAATCAATACAA+AGG 0.655028 2:-27659304 MsG0280008240.01.T01:three_prime_UTR
TGAAAAGATGTGGAAAGTGA+TGG 0.657855 2:-27660095 MsG0280008240.01.T01:CDS
ATGAATTATCATAGGCCAGG+TGG 0.666072 2:-27663284 MsG0280008240.01.T01:CDS
ATGAATTATCATAGGCCAGG+TGG 0.670000 2:-27663197 MsG0280008240.01.T01:CDS
ATATTAGGCCTAACATTCGG+AGG 0.682974 2:+27662852 None:intergenic
ACTAGGATGGAAAGTAACGA+GGG 0.687427 2:-27661717 MsG0280008240.01.T01:CDS
AAAATGGATGGATTTGTAGG+TGG 0.713013 2:+27662885 None:intergenic
GACTCTAATGAGAACTCACG+AGG 0.730047 2:+27663479 None:intergenic
GGGAACTAAGGATATCTCAG+AGG 0.742533 2:-27661697 MsG0280008240.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTACATTATTTATTATTGT+TGG - Chr2:27662069-27662088 MsG0280008240.01.T01:intron 10.0%
!! AATGTAAATATTTAAAGAAG+TGG + Chr2:27662057-27662076 None:intergenic 15.0%
!!! TTTACAATTTTTTTTTCCAA+AGG - Chr2:27662594-27662613 MsG0280008240.01.T01:CDS 15.0%
!! AATTCAGGAATGAATTATTA+TGG - Chr2:27659812-27659831 MsG0280008240.01.T01:CDS 20.0%
!! AATTCATTCTCGAAATAATT+CGG + Chr2:27659721-27659740 None:intergenic 20.0%
!! ATTCAGGAATGAATTATTAT+GGG - Chr2:27659813-27659832 MsG0280008240.01.T01:CDS 20.0%
!! ATTCTTCAACTATATACAAA+TGG - Chr2:27662807-27662826 MsG0280008240.01.T01:CDS 20.0%
!! ATTGTAAAGAGATAAATAAG+TGG + Chr2:27662582-27662601 None:intergenic 20.0%
!! CCTTAAAATGACAATTAAAA+AGG + Chr2:27662460-27662479 None:intergenic 20.0%
!!! ACAAAATTTATTGGTTTTCT+TGG + Chr2:27662496-27662515 None:intergenic 20.0%
!!! ATTTTTGATACTTCAAAACT+TGG + Chr2:27660745-27660764 None:intergenic 20.0%
!!! ATTTTTTCTCATATGCAATT+CGG + Chr2:27662150-27662169 None:intergenic 20.0%
!!! CCTTTTTAATTGTCATTTTA+AGG - Chr2:27662457-27662476 MsG0280008240.01.T01:CDS 20.0%
!!! GTATAGTGAAATTCTTTTTT+AGG + Chr2:27661392-27661411 None:intergenic 20.0%
! AAATGACAATTAAAAAGGAG+CGG + Chr2:27662455-27662474 None:intergenic 25.0%
! AACAAGTGAAAACATTTGTT+AGG + Chr2:27661841-27661860 None:intergenic 25.0%
! AATTCATTCCTGAATTAACT+CGG + Chr2:27659808-27659827 None:intergenic 25.0%
! AATTCATTCTCGAAGTAATA+TGG + Chr2:27659895-27659914 None:intergenic 25.0%
! AGAATTCACTAAAAATCTTG+AGG + Chr2:27661188-27661207 None:intergenic 25.0%
! AGCTAAATGCATAATTACAT+TGG + Chr2:27663616-27663635 None:intergenic 25.0%
! ATCATACCAGTAATAAATTG+AGG + Chr2:27661729-27661748 None:intergenic 25.0%
! CATTTAGCTAATCAATACAA+AGG - Chr2:27663627-27663646 MsG0280008240.01.T01:CDS 25.0%
! CTAAGTAACTATGAAGTAAA+AGG - Chr2:27662178-27662197 MsG0280008240.01.T01:CDS 25.0%
! CTTCGAGAATGAATTATTAT+TGG - Chr2:27659900-27659919 MsG0280008240.01.T01:CDS 25.0%
! TAATAAATACTGAGCTTTCT+TGG + Chr2:27660961-27660980 None:intergenic 25.0%
! TAGATTCAATGTAAGCAATA+TGG + Chr2:27659385-27659404 None:intergenic 25.0%
! TCATTTCCTCAATTTATTAC+TGG - Chr2:27661720-27661739 MsG0280008240.01.T01:CDS 25.0%
! TTTCGAGAATGAATTATCAT+AGG - Chr2:27659726-27659745 MsG0280008240.01.T01:CDS 25.0%
!! ACAAGTGAAAACATTTGTTA+GGG + Chr2:27661840-27661859 None:intergenic 25.0%
!! AGATGCTTTTCAAAAGAATT+AGG - Chr2:27662002-27662021 MsG0280008240.01.T01:intron 25.0%
!! CTGTCTTTTTGAATGTAATT+TGG + Chr2:27662928-27662947 None:intergenic 25.0%
!! CTTTGAGAATGAATTATCAT+AGG - Chr2:27659639-27659658 MsG0280008240.01.T01:CDS 25.0%
!! CTTTTTGAATGTAATTTGGA+AGG + Chr2:27662924-27662943 None:intergenic 25.0%
!! TTCAAAATTATGCAACCTTT+TGG - Chr2:27661866-27661885 MsG0280008240.01.T01:CDS 25.0%
!!! ACTTCAAATTTTGACTGAAA+AGG + Chr2:27662407-27662426 None:intergenic 25.0%
!!! CAAATGTTTTCACTTGTTAT+CGG - Chr2:27661843-27661862 MsG0280008240.01.T01:CDS 25.0%
AAAGGTTTATCCTCATTAGT+TGG + Chr2:27661976-27661995 None:intergenic 30.0%
AACTTCTTGAATTGGTACAA+GGG - Chr2:27662332-27662351 MsG0280008240.01.T01:CDS 30.0%
AACTTTCATCTTTAACAGTC+TGG - Chr2:27662115-27662134 MsG0280008240.01.T01:CDS 30.0%
AAGAATCTTAGCTTCATCTA+AGG + Chr2:27662889-27662908 None:intergenic 30.0%
AATACAAAGGTAGATAGCAA+GGG - Chr2:27663640-27663659 MsG0280008240.01.T01:CDS 30.0%
ACACCATCAACAATTGATTA+TGG - Chr2:27659599-27659618 MsG0280008240.01.T01:CDS 30.0%
ACTCCATAATCAATTGTTGA+TGG + Chr2:27659605-27659624 None:intergenic 30.0%
AGAATGAATTATTATTGGCC+AGG - Chr2:27659905-27659924 MsG0280008240.01.T01:CDS 30.0%
ATATCCTCAACTTCTTGAAT+TGG - Chr2:27662324-27662343 MsG0280008240.01.T01:CDS 30.0%
ATGATGAATATAGAGGATTG+AGG - Chr2:27660212-27660231 MsG0280008240.01.T01:intron 30.0%
ATGGATCAAAACAAACTGAT+GGG - Chr2:27663309-27663328 MsG0280008240.01.T01:CDS 30.0%
ATTGGACAAGTTAAATGCAT+GGG - Chr2:27661291-27661310 MsG0280008240.01.T01:intron 30.0%
ATTGTGAAGTTATGAAGCAA+TGG - Chr2:27663480-27663499 MsG0280008240.01.T01:CDS 30.0%
CAAATCTTGAAATCGAGTTA+AGG - Chr2:27662994-27663013 MsG0280008240.01.T01:CDS 30.0%
GAAATGATATTAATTCCTCC+AGG - Chr2:27660332-27660351 MsG0280008240.01.T01:intron 30.0%
GAACAATAAGTCCGAATAAA+GGG + Chr2:27663166-27663185 None:intergenic 30.0%
TAACTATGAAGTAAAAGGAG+AGG - Chr2:27662183-27662202 MsG0280008240.01.T01:CDS 30.0%
TAACTCGATTTCAAGATTTG+AGG + Chr2:27662994-27663013 None:intergenic 30.0%
TATGGATCAAAACAAACTGA+TGG - Chr2:27663308-27663327 MsG0280008240.01.T01:CDS 30.0%
TATTCGGACTTATTGTTCAA+TGG - Chr2:27663168-27663187 MsG0280008240.01.T01:CDS 30.0%
TCAACAATTGATTATGGAGT+TGG - Chr2:27659605-27659624 MsG0280008240.01.T01:CDS 30.0%
TGAACAATAAGTCCGAATAA+AGG + Chr2:27663167-27663186 None:intergenic 30.0%
TTAACATCTCATGAACATTC+AGG - Chr2:27660978-27660997 MsG0280008240.01.T01:intron 30.0%
TTCAACTATATACAAATGGC+AGG - Chr2:27662811-27662830 MsG0280008240.01.T01:CDS 30.0%
TTCATCTACTATATTTCTCC+TGG + Chr2:27660545-27660564 None:intergenic 30.0%
TTGCAATTGATGAATCCAAA+AGG + Chr2:27661884-27661903 None:intergenic 30.0%
TTGGAGAATACGTTTCAATT+CGG + Chr2:27659982-27660001 None:intergenic 30.0%
TTTAAAGAAGTGGAAAACTG+AGG + Chr2:27662047-27662066 None:intergenic 30.0%
! GAAAGACAATTTCTAGATAC+AGG + Chr2:27661057-27661076 None:intergenic 30.0%
! GTGAAAGATTTTGCTGATAT+AGG + Chr2:27659581-27659600 None:intergenic 30.0%
! TGTTTTGTCAACAATACCTT+TGG + Chr2:27662613-27662632 None:intergenic 30.0%
!! AGTTTTCTTTGGCTATTTTC+AGG + Chr2:27661815-27661834 None:intergenic 30.0%
!! ATTCAATCACTTTTGACAAG+TGG - Chr2:27661520-27661539 MsG0280008240.01.T01:intron 30.0%
!! CAATTTTTCTAAAAGAGCGA+CGG - Chr2:27662670-27662689 MsG0280008240.01.T01:CDS 30.0%
!! TGAAAAGCATCTACTAGAAA+AGG + Chr2:27661994-27662013 None:intergenic 30.0%
!! TTAACTTGTCCAATGTAGAT+TGG + Chr2:27661285-27661304 None:intergenic 30.0%
AAAACAAACTGATGGGAGTA+TGG - Chr2:27663316-27663335 MsG0280008240.01.T01:CDS 35.0%
AAATTACTTTGTCTCGACCA+AGG + Chr2:27662732-27662751 None:intergenic 35.0%
AAGAAAACTAAGCCTAGGAT+TGG - Chr2:27659506-27659525 MsG0280008240.01.T01:CDS 35.0%
AAGACAGACTTCCATTTCAA+TGG - Chr2:27662941-27662960 MsG0280008240.01.T01:CDS 35.0%
AATTACTTTGTCTCGACCAA+GGG + Chr2:27662731-27662750 None:intergenic 35.0%
AATTGCAAATGCACTCCATA+TGG - Chr2:27661896-27661915 MsG0280008240.01.T01:CDS 35.0%
AGAATACGTTTCAATTCGGA+CGG + Chr2:27659978-27659997 None:intergenic 35.0%
AGAATGAATTATCATAGGCC+AGG - Chr2:27659644-27659663 MsG0280008240.01.T01:CDS 35.0%
AGTATCAAAAATCAAGCTGC+AGG - Chr2:27660753-27660772 MsG0280008240.01.T01:CDS 35.0%
ATAGTAATCCAACGACGAAA+AGG + Chr2:27660152-27660171 None:intergenic 35.0%
ATATCTCAGAGGAACATTGT+AGG - Chr2:27661245-27661264 MsG0280008240.01.T01:intron 35.0%
ATCTACTATATTTCTCCTGG+AGG + Chr2:27660542-27660561 None:intergenic 35.0%
ATGAATTATTATTGGCCAGG+TGG - Chr2:27659908-27659927 MsG0280008240.01.T01:CDS 35.0%
ATTTCATGATGAAGACGTGT+CGG - Chr2:27661456-27661475 MsG0280008240.01.T01:intron 35.0%
CAACTTCTTGAATTGGTACA+AGG - Chr2:27662331-27662350 MsG0280008240.01.T01:CDS 35.0%
CAATACAAAGGTAGATAGCA+AGG - Chr2:27663639-27663658 MsG0280008240.01.T01:CDS 35.0%
CATTCTCGAAATAATTCGGA+CGG + Chr2:27659717-27659736 None:intergenic 35.0%
CATTCTCGAAGTAATATGGA+CGG + Chr2:27659891-27659910 None:intergenic 35.0%
CATTGGACAAGTTAAATGCA+TGG - Chr2:27661290-27661309 MsG0280008240.01.T01:intron 35.0%
CTGAGTATCTAGATCTCTAA+TGG + Chr2:27662236-27662255 None:intergenic 35.0%
CTTCATATTGAAGATGTGTC+TGG - Chr2:27661548-27661567 MsG0280008240.01.T01:intron 35.0%
GAAATGATATTAGTTCCTCC+AGG - Chr2:27660380-27660399 MsG0280008240.01.T01:intron 35.0%
GACGGTTAAAAAGGAATAGA+GGG - Chr2:27662688-27662707 MsG0280008240.01.T01:CDS 35.0%
GACTTATTGTTCAATGGTCA+AGG - Chr2:27663174-27663193 MsG0280008240.01.T01:CDS 35.0%
GATTCGAGAACAAACTCATA+TGG - Chr2:27663290-27663309 MsG0280008240.01.T01:CDS 35.0%
GCAAGAAGATAAGGAAGAAA+TGG - Chr2:27660815-27660834 MsG0280008240.01.T01:intron 35.0%
GCTCTTCGTGATTATATTGA+AGG - Chr2:27659422-27659441 MsG0280008240.01.T01:CDS 35.0%
GGAGAATATGGAAAAATGGA+TGG + Chr2:27660061-27660080 None:intergenic 35.0%
GGTATGGATGATGAATATAG+AGG - Chr2:27660205-27660224 MsG0280008240.01.T01:intron 35.0%
GTAATGATATTAGTTCCTCC+AGG - Chr2:27660524-27660543 MsG0280008240.01.T01:intron 35.0%
GTGCTTCATAGATACAGATA+TGG - Chr2:27661783-27661802 MsG0280008240.01.T01:CDS 35.0%
GTGTCAAACACATTCACATA+TGG - Chr2:27661493-27661512 MsG0280008240.01.T01:intron 35.0%
GTTCAGTTTCATCTTCTTCA+AGG + Chr2:27660267-27660286 None:intergenic 35.0%
TAAAAGAGCGACGGTTAAAA+AGG - Chr2:27662679-27662698 MsG0280008240.01.T01:CDS 35.0%
TAGCGAACTTTCTATCTATG+AGG - Chr2:27661354-27661373 MsG0280008240.01.T01:intron 35.0%
TAGTAATCCAACGACGAAAA+GGG + Chr2:27660151-27660170 None:intergenic 35.0%
TAGTGAATTCTTCTAGCACT+AGG - Chr2:27661197-27661216 MsG0280008240.01.T01:intron 35.0%
TATTCTCCAATGCAGCATTA+TGG - Chr2:27659992-27660011 MsG0280008240.01.T01:CDS 35.0%
TGAAAAGATGTGGAAAGTGA+TGG - Chr2:27662836-27662855 MsG0280008240.01.T01:CDS 35.0%
TGAAGAAGAAAACTAAGCCT+AGG - Chr2:27659501-27659520 MsG0280008240.01.T01:CDS 35.0%
TGGTGACTTTGATATGTCAT+CGG + Chr2:27663114-27663133 None:intergenic 35.0%
TGTACCAATTCAAGAAGTTG+AGG + Chr2:27662331-27662350 None:intergenic 35.0%
TGTGTTTGACACCAACATAT+CGG + Chr2:27661485-27661504 None:intergenic 35.0%
TTCAACAACGACATGTTCTT+TGG + Chr2:27660593-27660612 None:intergenic 35.0%
TTCAATGTAAGCAATATGGC+CGG + Chr2:27659381-27659400 None:intergenic 35.0%
TTCTTCAACTACATTTCTCC+TGG + Chr2:27660353-27660372 None:intergenic 35.0%
TTGAAATCGAGTTAAGGAAC+TGG - Chr2:27663000-27663019 MsG0280008240.01.T01:CDS 35.0%
! AAAATGGATGGATTTGTAGG+TGG + Chr2:27660049-27660068 None:intergenic 35.0%
! AAATCCCATTGAGCATTTTG+AGG + Chr2:27660118-27660137 None:intergenic 35.0%
! AATCCCATTGAGCATTTTGA+GGG + Chr2:27660117-27660136 None:intergenic 35.0%
! ATGCTCAATGGGATTTCTTT+TGG - Chr2:27660122-27660141 MsG0280008240.01.T01:intron 35.0%
! GGAAAAATGGATGGATTTGT+AGG + Chr2:27660052-27660071 None:intergenic 35.0%
! TTTTCGTCGTTGGATTACTA+TGG - Chr2:27660151-27660170 MsG0280008240.01.T01:intron 35.0%
!! AGAGGGAGTATACTTTTGTA+AGG - Chr2:27662705-27662724 MsG0280008240.01.T01:CDS 35.0%
!! AGTTGGTAAGCAAGAAGATA+AGG - Chr2:27660806-27660825 MsG0280008240.01.T01:intron 35.0%
!! CGATTTCTAGTAAGACCATA+TGG + Chr2:27661914-27661933 None:intergenic 35.0%
!!! CTCTTGTTTTATCTGCAGAA+GGG + Chr2:27662210-27662229 None:intergenic 35.0%
!!! GTAATGATTTTAGTTCCTCC+AGG - Chr2:27660476-27660495 MsG0280008240.01.T01:intron 35.0%
!!! TAATCCAGCTATTTTGGTTC+AGG - Chr2:27659670-27659689 MsG0280008240.01.T01:CDS 35.0%
!!! TTGTTAGGGCTAGTTTTCTT+TGG + Chr2:27661826-27661845 None:intergenic 35.0%
AAAATAGCTGGATTACCACC+TGG + Chr2:27659665-27659684 None:intergenic 40.0%
AAATCAAGCTGCAGGTCATA+TGG - Chr2:27660761-27660780 MsG0280008240.01.T01:CDS 40.0%
AAGATCCTACATTCAAGCAC+TGG - Chr2:27663055-27663074 MsG0280008240.01.T01:CDS 40.0%
AAGCAATGGAACAGTGTGAA+GGG - Chr2:27663494-27663513 MsG0280008240.01.T01:CDS 40.0%
AAGCTGTTGAGCAAAGAACT+CGG - Chr2:27659348-27659367 MsG0280008240.01.T01:three_prime_UTR 40.0%
AATAGTCGCTCCAACTAATG+AGG - Chr2:27661963-27661982 MsG0280008240.01.T01:intron 40.0%
AATGGCAATGACAATGGCAA+TGG - Chr2:27659548-27659567 MsG0280008240.01.T01:CDS 40.0%
AATGGCAATGGCAATGACAA+TGG - Chr2:27659542-27659561 MsG0280008240.01.T01:CDS 40.0%
ACTAGGATGGAAAGTAACGA+GGG - Chr2:27661214-27661233 MsG0280008240.01.T01:intron 40.0%
AGTAATCCAACGACGAAAAG+GGG + Chr2:27660150-27660169 None:intergenic 40.0%
ATATTAGGCCTAACATTCGG+AGG + Chr2:27660082-27660101 None:intergenic 40.0%
ATGAATTATCATAGGCCAGG+TGG - Chr2:27659647-27659666 MsG0280008240.01.T01:CDS 40.0%
ATGAATTATTATGGGCCAGG+TGG - Chr2:27659821-27659840 MsG0280008240.01.T01:CDS 40.0%
CAATCCAGCAATTTCAGTTG+AGG - Chr2:27659757-27659776 MsG0280008240.01.T01:CDS 40.0%
CAGCAATTTCAGTTGAGGAA+AGG - Chr2:27659762-27659781 MsG0280008240.01.T01:CDS 40.0%
CATATTCTCCTCCGAATGTT+AGG - Chr2:27660071-27660090 MsG0280008240.01.T01:CDS 40.0%
CATTCCTGAATTAACTCGGA+CGG + Chr2:27659804-27659823 None:intergenic 40.0%
CGAAGTAATATGGACGGTTT+CGG + Chr2:27659885-27659904 None:intergenic 40.0%
CGACGGTTAAAAAGGAATAG+AGG - Chr2:27662687-27662706 MsG0280008240.01.T01:CDS 40.0%
CGGAGGAGAATATGGAAAAA+TGG + Chr2:27660065-27660084 None:intergenic 40.0%
CTAACATTCGGAGGAGAATA+TGG + Chr2:27660073-27660092 None:intergenic 40.0%
CTTTCCTCAACTGAAATTGC+TGG + Chr2:27659764-27659783 None:intergenic 40.0%
CTTTCCTGAACCAAAATAGC+TGG + Chr2:27659677-27659696 None:intergenic 40.0%
CTTTGATATGTCATCGGGTT+CGG + Chr2:27663108-27663127 None:intergenic 40.0%
GAAATAATTCGGACGGTTTC+AGG + Chr2:27659710-27659729 None:intergenic 40.0%
GAAGATAAGGAAGAAATGGC+AGG - Chr2:27660819-27660838 MsG0280008240.01.T01:intron 40.0%
GAAGCTAAGATTCTTCTAGC+TGG - Chr2:27662894-27662913 MsG0280008240.01.T01:CDS 40.0%
GAAGTAATATGGACGGTTTC+GGG + Chr2:27659884-27659903 None:intergenic 40.0%
GAATTCTTCTAGCACTAGGA+TGG - Chr2:27661201-27661220 MsG0280008240.01.T01:intron 40.0%
GGAAAACTGAGGTTAATCAC+TGG + Chr2:27662036-27662055 None:intergenic 40.0%
GGAATGAATTATTATGGGCC+AGG - Chr2:27659818-27659837 MsG0280008240.01.T01:CDS 40.0%
GGGATATTAGGCCTAACATT+CGG + Chr2:27660085-27660104 None:intergenic 40.0%
GGTGACTTTGATATGTCATC+GGG + Chr2:27663113-27663132 None:intergenic 40.0%
GTGTCAAACACATTCACATG+TGG - Chr2:27661681-27661700 MsG0280008240.01.T01:CDS 40.0%
GTTTCATCTTCTTCAAGGTC+CGG + Chr2:27660262-27660281 None:intergenic 40.0%
GTTTGGATCAGCCATTGAAA+TGG + Chr2:27662955-27662974 None:intergenic 40.0%
TAATCCAGCAAACTCAGTTG+AGG - Chr2:27659844-27659863 MsG0280008240.01.T01:CDS 40.0%
TAATTCCTCCAGGAGAAATG+TGG - Chr2:27660342-27660361 MsG0280008240.01.T01:intron 40.0%
TCGTGAGTTCTCATTAGAGT+CGG - Chr2:27659454-27659473 MsG0280008240.01.T01:CDS 40.0%
TGAATATAGAGGATTGAGGC+AGG - Chr2:27660216-27660235 MsG0280008240.01.T01:intron 40.0%
TGAATTAACTCGGACGGTTT+CGG + Chr2:27659798-27659817 None:intergenic 40.0%
TGGTAGTCACCAATCTACAT+TGG - Chr2:27661273-27661292 MsG0280008240.01.T01:intron 40.0%
TTACCGTTTACGTAAACCGA+AGG - Chr2:27660844-27660863 MsG0280008240.01.T01:intron 40.0%
TTCAACTACATTTCTCCTGG+AGG + Chr2:27660350-27660369 None:intergenic 40.0%
TTCCCCTCAAAATGCTCAAT+GGG - Chr2:27660111-27660130 MsG0280008240.01.T01:intron 40.0%
TTCTTCTGCTACATTTCTCC+TGG + Chr2:27660401-27660420 None:intergenic 40.0%
TTCTTCTTCACAGGCGTAAA+AGG + Chr2:27659491-27659510 None:intergenic 40.0%
TTTCAATGGCTGATCCAAAC+AGG - Chr2:27662955-27662974 MsG0280008240.01.T01:CDS 40.0%
! AACTGATGGGAGTATGGAAA+TGG - Chr2:27663322-27663341 MsG0280008240.01.T01:CDS 40.0%
! ACTCAGTTGAAGCTATTTCC+CGG - Chr2:27662272-27662291 MsG0280008240.01.T01:CDS 40.0%
! AGGTGGTAATCCAGCTATTT+TGG - Chr2:27659664-27659683 MsG0280008240.01.T01:CDS 40.0%
! AGTATGGAAATGGTGGAAGT+CGG - Chr2:27663332-27663351 MsG0280008240.01.T01:CDS 40.0%
! ATCCCATTGAGCATTTTGAG+GGG + Chr2:27660116-27660135 None:intergenic 40.0%
! GCAACTTCAGCAAGTTTTTC+AGG + Chr2:27663383-27663402 None:intergenic 40.0%
! GCTATTAAAGTGCTTTGTGC+TGG - Chr2:27663401-27663420 MsG0280008240.01.T01:CDS 40.0%
! GTATACTTTTGTAAGGCCCT+TGG - Chr2:27662712-27662731 MsG0280008240.01.T01:CDS 40.0%
! TACCAACTGCCATTTCTCTA+TGG + Chr2:27660794-27660813 None:intergenic 40.0%
! TATCGATGACGATGATGATG+AGG - Chr2:27660615-27660634 MsG0280008240.01.T01:CDS 40.0%
! TGAATCTTTTGCATCGTGCT+CGG + Chr2:27660704-27660723 None:intergenic 40.0%
! TTTCAAGATTTGAGGCTGAC+CGG + Chr2:27662986-27663005 None:intergenic 40.0%
!! GGCTTAGTTTTCTTCTTCAC+AGG + Chr2:27659500-27659519 None:intergenic 40.0%
!!! CAGCTATTTTGGTTCAGGAA+AGG - Chr2:27659675-27659694 MsG0280008240.01.T01:CDS 40.0%
!!! GCTCTTGTTTTATCTGCAGA+AGG + Chr2:27662211-27662230 None:intergenic 40.0%
AATGGCAATGGCAATGGCAA+TGG - Chr2:27659530-27659549 MsG0280008240.01.T01:CDS 45.0%
ACGAGAAGAAGAGGGAATAC+CGG - Chr2:27660240-27660259 MsG0280008240.01.T01:intron 45.0%
AGAAGTGATCCATGACTCGA+AGG + Chr2:27663033-27663052 None:intergenic 45.0%
AGCCATAGAGAAATGGCAGT+TGG - Chr2:27660789-27660808 MsG0280008240.01.T01:CDS 45.0%
ATCACTTCTGCCATGCTTGT+TGG + Chr2:27660870-27660889 None:intergenic 45.0%
ATGGCAGGCTTGAAAAGATG+TGG - Chr2:27662826-27662845 MsG0280008240.01.T01:CDS 45.0%
ATTGGCAATGGCAATGGCAA+TGG - Chr2:27659524-27659543 MsG0280008240.01.T01:CDS 45.0%
CACTAGGATGGAAAGTAACG+AGG - Chr2:27661213-27661232 MsG0280008240.01.T01:intron 45.0%
CACTTTGATCGACGCTACTT+CGG + Chr2:27660186-27660205 None:intergenic 45.0%
CAGCAAACTCAGTTGAGGAA+AGG - Chr2:27659849-27659868 MsG0280008240.01.T01:CDS 45.0%
CGTTTCAATTCGGACGGTTT+CGG + Chr2:27659972-27659991 None:intergenic 45.0%
CTTCCCCTCAAAATGCTCAA+TGG - Chr2:27660110-27660129 MsG0280008240.01.T01:intron 45.0%
CTTTCCTCAACTGAGTTTGC+TGG + Chr2:27659851-27659870 None:intergenic 45.0%
GAAACCGTCCGAGTTAATTC+AGG - Chr2:27659797-27659816 MsG0280008240.01.T01:CDS 45.0%
GAAGCAATGGAACAGTGTGA+AGG - Chr2:27663493-27663512 MsG0280008240.01.T01:CDS 45.0%
GAAGCTCTATGACGAAGTCA+AGG - Chr2:27661318-27661337 MsG0280008240.01.T01:intron 45.0%
GAATTAACTCGGACGGTTTC+GGG + Chr2:27659797-27659816 None:intergenic 45.0%
GACTCTAATGAGAACTCACG+AGG + Chr2:27659455-27659474 None:intergenic 45.0%
GAGGAACATTGTAGGCTTTC+TGG - Chr2:27661253-27661272 MsG0280008240.01.T01:intron 45.0%
GGAAAGTAACGAGGGAACTA+AGG - Chr2:27661222-27661241 MsG0280008240.01.T01:intron 45.0%
GGAATCCAGCCATAGAGAAA+TGG - Chr2:27660782-27660801 MsG0280008240.01.T01:CDS 45.0%
GGGAACTAAGGATATCTCAG+AGG - Chr2:27661234-27661253 MsG0280008240.01.T01:intron 45.0%
GGGATGTTCACAATCAAAGC+TGG - Chr2:27659274-27659293 MsG0280008240.01.T01:three_prime_UTR 45.0%
GTTTCAATTCGGACGGTTTC+GGG + Chr2:27659971-27659990 None:intergenic 45.0%
TGATGAGGAAGAGGAAGAAG+AGG - Chr2:27660630-27660649 MsG0280008240.01.T01:CDS 45.0%
TGGCCTTCGGTTTACGTAAA+CGG + Chr2:27660850-27660869 None:intergenic 45.0%
TGTTTGACACCAACACACGT+CGG + Chr2:27661671-27661690 None:intergenic 45.0%
TTCTGCTACATTTCTCCTGG+AGG + Chr2:27660398-27660417 None:intergenic 45.0%
TTCTTCACAGGCGTAAAAGG+TGG + Chr2:27659488-27659507 None:intergenic 45.0%
TTCTTCTGCCACATTTCTCC+TGG + Chr2:27660449-27660468 None:intergenic 45.0%
! AACTGCCATTTCTCTATGGC+TGG + Chr2:27660790-27660809 None:intergenic 45.0%
! ACTAAGCCTAGGATTGGCAA+TGG - Chr2:27659512-27659531 MsG0280008240.01.T01:CDS 45.0%
! TGAATCCAGTCGCTTTGTTC+CGG - Chr2:27661140-27661159 MsG0280008240.01.T01:intron 45.0%
! TGACGATGATGATGAGGAAG+AGG - Chr2:27660621-27660640 MsG0280008240.01.T01:CDS 45.0%
! TGATGGGAGTATGGAAATGG+TGG - Chr2:27663325-27663344 MsG0280008240.01.T01:CDS 45.0%
! TTCAAGATTTGAGGCTGACC+GGG + Chr2:27662985-27663004 None:intergenic 45.0%
! TTTCCTCAACCGAGTTTGCT+GGG + Chr2:27659937-27659956 None:intergenic 45.0%
!! CATTGAGCATTTTGAGGGGA+AGG + Chr2:27660112-27660131 None:intergenic 45.0%
!! GTTTGCTTTTGAGTCTGCTG+AGG - Chr2:27663454-27663473 MsG0280008240.01.T01:CDS 45.0%
!! TAGCGTCGATCAAAGTGGTA+TGG - Chr2:27660189-27660208 MsG0280008240.01.T01:intron 45.0%
!!! GACTTTTTTGCAGCTGGGAT+GGG - Chr2:27663239-27663258 MsG0280008240.01.T01:CDS 45.0%
!!! GCATGGACTTTTTTGCAGCT+GGG - Chr2:27663234-27663253 MsG0280008240.01.T01:CDS 45.0%
!! AAAAAAATAACAAAATTTAT+TGG + Chr2:27662505-27662524 None:intergenic 5.0%
!! TAAATAGTTAATAATATTAT+AGG + Chr2:27662549-27662568 None:intergenic 5.0%
!!! TAAATTTTGTTATTTTTTTA+TGG - Chr2:27662506-27662525 MsG0280008240.01.T01:CDS 5.0%
AAACCGAAGGCCAACAAGCA+TGG - Chr2:27660857-27660876 MsG0280008240.01.T01:intron 50.0%
AAGAGGAAGAAGAGGAGGAC+GGG - Chr2:27660638-27660657 MsG0280008240.01.T01:CDS 50.0%
AGCGGCAGTCACCCTTTATT+CGG - Chr2:27663152-27663171 MsG0280008240.01.T01:CDS 50.0%
AGGCAGGTACGAGAAGAAGA+GGG - Chr2:27660232-27660251 MsG0280008240.01.T01:intron 50.0%
AGGTGGTAACCCAGCAAACT+CGG - Chr2:27659925-27659944 MsG0280008240.01.T01:CDS 50.0%
AGTCACCATGCTCTCCTCAT+AGG - Chr2:27663126-27663145 MsG0280008240.01.T01:CDS 50.0%
CAGCAAACTCGGTTGAGGAA+AGG - Chr2:27659936-27659955 MsG0280008240.01.T01:CDS 50.0%
CAGCATTATGGCACTGCTGA+TGG - Chr2:27660004-27660023 MsG0280008240.01.T01:CDS 50.0%
CCATTGCCATTGCCAATCCT+AGG + Chr2:27659521-27659540 None:intergenic 50.0%
CCCTCAGAGTTTCGATTCTC+CGG + Chr2:27662294-27662313 None:intergenic 50.0%
CCGGAGAATCGAAACTCTGA+GGG - Chr2:27662291-27662310 MsG0280008240.01.T01:CDS 50.0%
CCTCAGAGTTTCGATTCTCC+GGG + Chr2:27662293-27662312 None:intergenic 50.0%
CTTGACCTATGAGGAGAGCA+TGG + Chr2:27663134-27663153 None:intergenic 50.0%
CTTTCCTCAACCGAGTTTGC+TGG + Chr2:27659938-27659957 None:intergenic 50.0%
GAAATTGCTGGATTGCCACC+TGG + Chr2:27659752-27659771 None:intergenic 50.0%
GAAGAGGAAGAAGAGGAGGA+CGG - Chr2:27660637-27660656 MsG0280008240.01.T01:CDS 50.0%
GCAGTGCCATAATGCTGCAT+TGG + Chr2:27660001-27660020 None:intergenic 50.0%
GGGGAAGAGGATGAAGAAGA+GGG - Chr2:27660658-27660677 MsG0280008240.01.T01:CDS 50.0%
GTAATATGGACGGTTTCGGG+TGG + Chr2:27659881-27659900 None:intergenic 50.0%
TAACCCAGCAAACTCGGTTG+AGG - Chr2:27659931-27659950 MsG0280008240.01.T01:CDS 50.0%
TCATGTGGAGGAAGATGCGA+TGG - Chr2:27663355-27663374 MsG0280008240.01.T01:CDS 50.0%
TCTTGACGGTGTACGCGAAA+AGG - Chr2:27663199-27663218 MsG0280008240.01.T01:CDS 50.0%
TGAGGAAGAGGAAGAAGAGG+AGG - Chr2:27660633-27660652 MsG0280008240.01.T01:CDS 50.0%
TGATCGACGCTACTTCGGTT+TGG + Chr2:27660181-27660200 None:intergenic 50.0%
TGCTCTCCTCATAGGTCAAG+CGG - Chr2:27663134-27663153 MsG0280008240.01.T01:CDS 50.0%
TGTTTGACACCACCACACGT+CGG + Chr2:27661577-27661596 None:intergenic 50.0%
TTCTGCCACATTTCTCCTGG+AGG + Chr2:27660446-27660465 None:intergenic 50.0%
! AATGGTGGAAGTCGGTCATG+TGG - Chr2:27663340-27663359 MsG0280008240.01.T01:CDS 50.0%
! ATTCGGACGGTTTCAGGTGA+TGG + Chr2:27659704-27659723 None:intergenic 50.0%
! CAAAGAACTCGGTTTGCGAC+CGG - Chr2:27659359-27659378 MsG0280008240.01.T01:three_prime_UTR 50.0%
! CAATGGTCAAGGCGTCTTGA+CGG - Chr2:27663185-27663204 MsG0280008240.01.T01:CDS 50.0%
! CCTAGGATTGGCAATGGCAA+TGG - Chr2:27659518-27659537 MsG0280008240.01.T01:CDS 50.0%
! TTGGAACCCCTTTTCGTCGT+TGG - Chr2:27660141-27660160 MsG0280008240.01.T01:intron 50.0%
!! CATTTTGAGGGGAAGGTGGA+GGG + Chr2:27660105-27660124 None:intergenic 50.0%
!! CGAAGTAGCGTCGATCAAAG+TGG - Chr2:27660184-27660203 MsG0280008240.01.T01:intron 50.0%
!! GAGTTTGCTGGATTACCACC+TGG + Chr2:27659839-27659858 None:intergenic 50.0%
!! TCCTACATTCAAGCACTGGC+CGG - Chr2:27663059-27663078 MsG0280008240.01.T01:CDS 50.0%
!! TGAGCATTTTGAGGGGAAGG+TGG + Chr2:27660109-27660128 None:intergenic 50.0%
!!! GGACTTTTTTGCAGCTGGGA+TGG - Chr2:27663238-27663257 MsG0280008240.01.T01:CDS 50.0%
!!! GGCATGGACTTTTTTGCAGC+TGG - Chr2:27663233-27663252 MsG0280008240.01.T01:CDS 50.0%
AAAGGCAGTGCTTGACGGCA+TGG - Chr2:27663217-27663236 MsG0280008240.01.T01:CDS 55.0%
AAGACCGCGAAGAAGCTGTC+CGG + Chr2:27661162-27661181 None:intergenic 55.0%
AGAGGAAGAAGAGGAGGACG+GGG - Chr2:27660639-27660658 MsG0280008240.01.T01:CDS 55.0%
CCCGGAGAATCGAAACTCTG+AGG - Chr2:27662290-27662309 MsG0280008240.01.T01:CDS 55.0%
CGCGAAAAGGCAGTGCTTGA+CGG - Chr2:27663212-27663231 MsG0280008240.01.T01:CDS 55.0%
CGGGGAAGAGGATGAAGAAG+AGG - Chr2:27660657-27660676 MsG0280008240.01.T01:CDS 55.0%
GAGGCAGGTACGAGAAGAAG+AGG - Chr2:27660231-27660250 MsG0280008240.01.T01:intron 55.0%
GGCGAATCACCTTCGAGTCA+TGG - Chr2:27663021-27663040 MsG0280008240.01.T01:CDS 55.0%
GGGGAAGGTGGAGGGATATT+AGG + Chr2:27660097-27660116 None:intergenic 55.0%
TCAATTCGGACGGTTTCGGG+TGG + Chr2:27659968-27659987 None:intergenic 55.0%
TCCGGCCAGTGCTTGAATGT+AGG + Chr2:27663063-27663082 None:intergenic 55.0%
TGATGCGTCAGAGCTGTGTC+TGG - Chr2:27661745-27661764 MsG0280008240.01.T01:CDS 55.0%
TGTTCCGGACAGCTTCTTCG+CGG - Chr2:27661155-27661174 MsG0280008240.01.T01:intron 55.0%
! ATATGGACGGTTTCGGGTGG+TGG + Chr2:27659878-27659897 None:intergenic 55.0%
! CGTGTCGGTGACCGATATGT+TGG - Chr2:27661471-27661490 MsG0280008240.01.T01:intron 55.0%
! CTGATCCAAACAGGCTAGCC+CGG - Chr2:27662964-27662983 MsG0280008240.01.T01:CDS 55.0%
! TGACTGCCGCTTGACCTATG+AGG + Chr2:27663143-27663162 None:intergenic 55.0%
!! ACATTCAAGCACTGGCCGGA+TGG - Chr2:27663063-27663082 MsG0280008240.01.T01:CDS 55.0%
!! CTGCCATGCTTGTTGGCCTT+CGG + Chr2:27660863-27660882 None:intergenic 55.0%
!! GAGTTTGCTGGGTTACCACC+TGG + Chr2:27659926-27659945 None:intergenic 55.0%
!! GCATTTTGAGGGGAAGGTGG+AGG + Chr2:27660106-27660125 None:intergenic 55.0%
AGAAGAGGAGGACGGGGAAG+AGG - Chr2:27660645-27660664 MsG0280008240.01.T01:CDS 60.0%
GCTGTCCGGAACAAAGCGAC+TGG + Chr2:27661148-27661167 None:intergenic 60.0%
GGTGGAAGTCGGTCATGTGG+AGG - Chr2:27663343-27663362 MsG0280008240.01.T01:CDS 60.0%
GTCTGGTGTCCGACGTGTGT+TGG - Chr2:27661659-27661678 MsG0280008240.01.T01:CDS 60.0%
TGTGTCTGGTGTCCGACGTG+TGG - Chr2:27661562-27661581 MsG0280008240.01.T01:intron 60.0%
! ACTCGGACGGTTTCGGGTGA+TGG + Chr2:27659791-27659810 None:intergenic 60.0%
! ATTCGGACGGTTTCGGGTGG+TGG + Chr2:27659965-27659984 None:intergenic 60.0%
CACGCACCGGAGAAGCCATC+CGG + Chr2:27663081-27663100 None:intergenic 65.0%
CACTGGCCGGATGGCTTCTC+CGG - Chr2:27663072-27663091 MsG0280008240.01.T01:CDS 65.0%
CGGGTTCGGATCTCACGCAC+CGG + Chr2:27663094-27663113 None:intergenic 65.0%
GTCTGGTGTCCGACGTGTGG+TGG - Chr2:27661565-27661584 MsG0280008240.01.T01:intron 65.0%
! CGGACGGTTTCGGGTGATGG+AGG + Chr2:27659788-27659807 None:intergenic 65.0%
! TGGACGGTTTCGGGTGGTGG+AGG + Chr2:27659875-27659894 None:intergenic 65.0%
!! GCTGACCGGGCTAGCCTGTT+TGG + Chr2:27662972-27662991 None:intergenic 65.0%
! CGGACGGTTTCGGGTGGTGG+AGG + Chr2:27659962-27659981 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 27659272 27663681 27659272 ID=MsG0280008240.01;Name=MsG0280008240.01
Chr2 mRNA 27659272 27663681 27659272 ID=MsG0280008240.01.T01;Parent=MsG0280008240.01;Name=MsG0280008240.01.T01;_AED=0.18;_eAED=0.21;_QI=0|0.66|0.5|1|1|1|4|134|952
Chr2 exon 27659272 27660120 27659272 ID=MsG0280008240.01.T01:exon:18950;Parent=MsG0280008240.01.T01
Chr2 exon 27660600 27660820 27660600 ID=MsG0280008240.01.T01:exon:18949;Parent=MsG0280008240.01.T01
Chr2 exon 27661614 27661953 27661614 ID=MsG0280008240.01.T01:exon:18948;Parent=MsG0280008240.01.T01
Chr2 exon 27662099 27663681 27662099 ID=MsG0280008240.01.T01:exon:18947;Parent=MsG0280008240.01.T01
Chr2 CDS 27662099 27663681 27662099 ID=MsG0280008240.01.T01:cds;Parent=MsG0280008240.01.T01
Chr2 CDS 27661614 27661953 27661614 ID=MsG0280008240.01.T01:cds;Parent=MsG0280008240.01.T01
Chr2 CDS 27660600 27660820 27660600 ID=MsG0280008240.01.T01:cds;Parent=MsG0280008240.01.T01
Chr2 CDS 27659406 27660120 27659406 ID=MsG0280008240.01.T01:cds;Parent=MsG0280008240.01.T01
Chr2 three_prime_UTR 27659272 27659405 27659272 ID=MsG0280008240.01.T01:three_prime_utr;Parent=MsG0280008240.01.T01
Gene Sequence

>MsG0280008240.01.T01

ATGGGATGTTCACAATCAAAGCTGGATGATGAAGAGTCAGTTCAGCTTTGTAAAGATAGAAAGAGATTCATCAAACAAGCTGTTGAGCAAAGAACTCGGTTTGCGACCGGCCATATTGCTTACATTGAATCTATGAAAAGAGTTTCTGCTGCTCTTCGTGATTATATTGAAGGAGACGAGCCTCGTGAGTTCTCATTAGAGTCGGTGATTACGCCACCTTTTACGCCTGTGAAGAAGAAAACTAAGCCTAGGATTGGCAATGGCAATGGCAATGGCAATGGCAATGACAATGGCAATGGCTTCATTCCTATATCAGCAAAATCTTTCACACCATCAACAATTGATTATGGAGTTGGAGAAAATGATACTTTGAGAATGAATTATCATAGGCCAGGTGGTAATCCAGCTATTTTGGTTCAGGAAAGGCTTCCATCACCTGAAACCGTCCGAATTATTTCGAGAATGAATTATCATAGGCCAGGTGGCAATCCAGCAATTTCAGTTGAGGAAAGGCCTCCATCACCCGAAACCGTCCGAGTTAATTCAGGAATGAATTATTATGGGCCAGGTGGTAATCCAGCAAACTCAGTTGAGGAAAGGCCTCCACCACCCGAAACCGTCCATATTACTTCGAGAATGAATTATTATTGGCCAGGTGGTAACCCAGCAAACTCGGTTGAGGAAAGGCCTCCACCACCCGAAACCGTCCGAATTGAAACGTATTCTCCAATGCAGCATTATGGCACTGCTGATGGTTATTTTACAATGCAGTCACCACCTACAAATCCATCCATTTTTCCATATTCTCCTCCGAATGTTAGGCCTAATATCCCTCCACCTTCCCCTCAAAATGCTCAATGGGATTTCTTTTGGAACCCCTTTTCGTCGTTGGATTACTATGGTTATCCAAACCGAAGTAGCGTCGATCAAAGTGGTATGGATGATGAATATAGAGGATTGAGGCAGGTACGAGAAGAAGAGGGAATACCGGACCTTGAAGAAGATGAAACTGAACATGAAGATTATGTTGTGAAGAGAAATGTAATAGAAGAAAGAACTAGAAATGATATTAATTCCTCCAGGAGAAATGTAGTTGAAGAAAGAACTCGAAATGATATTAGTTCCTCCAGGAGAAATGTAGCAGAAGAAAGAACTCGAAATGATATTAATTCCTCCAGGAGAAATGTGGCAGAAGAAAAAACTCGTAATGATTTTAGTTCCTCCAGGAGAAATGTAGCAGAAGAAAAAACTCGTAATGATATTAGTTCCTCCAGGAGAAATATAGTAGATGAAAGAACTCGAAATGATGTTAATTTCTCCAAAGAACATGTCGTTGTTGAAGATATCGATGACGATGATGATGAGGAAGAGGAAGAAGAGGAGGACGGGGAAGAGGATGAAGAAGAGGGATCAGATGATGAAACTGAAACCGAGCACGATGCAAAAGATTCACAACAAGCTCGTGACAATCCAAGTTTTGAAGTATCAAAAATCAAGCTGCAGGTCATATGGAATCCAGCCATAGAGAAATGGCAGTTGGTAAGCAAGAAGATAAGGAAGAAATGGCAGGTTTTACCGTTTACGTTTGATGAAAACATGCAATTTATTATTTTCATGTTCATAAAAAATATGATTGTCCTGTATCTAGAAATTGTCTTTCTTAAGCTTTCAAATTTTCGTGAATATGAATTTGACATATTGTCATTTGCAGCATCAAAATTATTGAATCCAGTCGCTTTGTTCCGGACAGCTTCTTCGCGGTCTTCTTCCTCAAGATTTTTAGTGAATTCTTCTAGCACTAGGATGGAAAGTAACGAGGGAACTAAGGATATCTCAGAGGAACATTGTAGGCTTTCTGGTAGTCACCAATCTACATTGGACAAGTTAAATGCATGGGAGAAGAAGCTCTATGACGAAGTCAAGTCTGGAGAACGAGTCCGAATTGCATATGAGAAAAAATGCAAGCAACTAAGTAACTATGAAGTAAAAGGAGAGGACCCTTCTGCAGATAAAACAAGAGCAACCATTAGAGATCTAGATACTCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCCGGAGAATCGAAACTCTGAGGGACGAAGAGTTATATCCTCAACTTCTTGAATTGGTACAAGGGCTTGAAAAGATGTGGAAAGTGATGGCAGAATGTCATCAAACACAGAAGAGAACCTTAGATGAAGCTAAGATTCTTCTAGCTGGCACACCTTCCAAATTACATTCAAAAAGACAGACTTCCATTTCAATGGCTGATCCAAACAGGCTAGCCCGGTCAGCCTCAAATCTTGAAATCGAGTTAAGGAACTGGCGAATCACCTTCGAGTCATGGATCACTTCTCAAAGATCCTACATTCAAGCACTGGCCGGATGGCTTCTCCGGTGCGTGAGATCCGAACCCGATGACATATCAAAGTCACCATGCTCTCCTCATAGGTCAAGCGGCAGTCACCCTTTATTCGGACTTATTGTTCAATGGTCAAGGCGTCTTGACGGTGTACGCGAAAAGGCAGTGCTTGACGGCATGGACTTTTTTGCAGCTGGGATGGGATCCCTCTATGCGCATCAACTGAGACAAGATTCGAGAACAAACTCATATGGATCAAAACAAACTGATGGGAGTATGGAAATGGTGGAAGTCGGTCATGTGGAGGAAGATGCGATGGCGCCTGAAAAACTTGCTGAAGTTGCTATTAAAGTGCTTTGTGCTGGAATGTCAGTTGCAATAAGCTCATTAGCAGAGTTTGCTTTTGAGTCTGCTGAGGCATATTGTGAAGTTATGAAGCAATGGAACAGTGTGAAGGGTCAGCATAACTCTAGTGAGACTAGAACATAG
Protein sequence

>MsG0280008240.01.T01

MGCSQSKLDDEESVQLCKDRKRFIKQAVEQRTRFATGHIAYIESMKRVSAALRDYIEGDEPREFSLESVITPPFTPVKKKTKPRIGNGNGNGNGNDNGNGFIPISAKSFTPSTIDYGVGENDTLRMNYHRPGGNPAILVQERLPSPETVRIISRMNYHRPGGNPAISVEERPPSPETVRVNSGMNYYGPGGNPANSVEERPPPPETVHITSRMNYYWPGGNPANSVEERPPPPETVRIETYSPMQHYGTADGYFTMQSPPTNPSIFPYSPPNVRPNIPPPSPQNAQWDFFWNPFSSLDYYGYPNRSSVDQSGMDDEYRGLRQVREEEGIPDLEEDETEHEDYVVKRNVIEERTRNDINSSRRNVVEERTRNDISSSRRNVAEERTRNDINSSRRNVAEEKTRNDFSSSRRNVAEEKTRNDISSSRRNIVDERTRNDVNFSKEHVVVEDIDDDDDEEEEEEEDGEEDEEEGSDDETETEHDAKDSQQARDNPSFEVSKIKLQVIWNPAIEKWQLVSKKIRKKWQVLPFTFDENMQFIIFMFIKNMIVLYLEIVFLKLSNFREYEFDILSFAASKLLNPVALFRTASSRSSSSRFLVNSSSTRMESNEGTKDISEEHCRLSGSHQSTLDKLNAWEKKLYDEVKSGERVRIAYEKKCKQLSNYEVKGEDPSADKTRATIRDLDTQITVSIHSVEAISRRIETLRDEELYPQLLELVQGLEKMWKVMAECHQTQKRTLDEAKILLAGTPSKLHSKRQTSISMADPNRLARSASNLEIELRNWRITFESWITSQRSYIQALAGWLLRCVRSEPDDISKSPCSPHRSSGSHPLFGLIVQWSRRLDGVREKAVLDGMDFFAAGMGSLYAHQLRQDSRTNSYGSKQTDGSMEMVEVGHVEEDAMAPEKLAEVAIKVLCAGMSVAISSLAEFAFESAEAYCEVMKQWNSVKGQHNSSETRT*