AlfalfaGEDB | MsG0280008944.01

M. sativa cultivar ZhongmuNo.1 / MsG0280008944.01

KEGG: -
GO: GO:0005515
PFAM: PF00856

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008944.01.T01	XP_039686496.1	79.429	175	2	1	1	141	233	407	3.10E-89	277

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008944.01.T01	Q949T8	61.143	175	34	1	1	141	271	445	2.62E-70	222

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008944.01.T01	A0A072THL4	79.429	175	2	1	1	141	155	329	2.13e-89	274

TFs/TRs:

Gene ID	Type	Classification
MsG0280008944.01.T01	TR	SET

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0280008944.01	MsG0280008952.01	0.875118	3.965210e-68	1.830159e-64
MsG0280008944.01	MsG0380015219.01	0.804361	2.241063e-49	1.153238e-46
MsG0280008944.01	MsG0580024954.01	0.805807	1.117076e-49	5.966286e-47
MsG0280008944.01	MsG0580029591.01	0.800627	1.319054e-48	6.171344e-46
MsG0280008944.01	MsG0780040364.01	0.806043	9.963710e-50	5.353853e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008944.01.T01	MTR_0071s0100	79.429	175	2	1	1	141	155	329	5.39e-93	274
MsG0280008944.01.T01	MTR_6g059310	63.717	113	41	0	29	141	119	231	1.79e-47	156
MsG0280008944.01.T01	MTR_6g059310	63.717	113	41	0	29	141	119	231	1.84e-47	156
MsG0280008944.01.T01	MTR_3g088625	51.376	109	53	0	33	141	1229	1337	1.01e-30	115
MsG0280008944.01.T01	MTR_3g088625	51.376	109	53	0	33	141	1335	1443	1.25e-30	115
MsG0280008944.01.T01	MTR_1g098370	43.750	112	63	0	29	140	105	216	8.48e-27	104
MsG0280008944.01.T01	MTR_1g098000	43.750	112	63	0	29	140	102	213	1.16e-26	103
MsG0280008944.01.T01	MTR_2g036060	37.383	107	67	0	34	140	1044	1150	4.18e-22	91.3
MsG0280008944.01.T01	MTR_2g036060	37.383	107	67	0	34	140	1069	1175	4.98e-22	91.3
MsG0280008944.01.T01	MTR_1g012910	37.719	114	63	2	33	140	537	648	7.57e-19	82.0
MsG0280008944.01.T01	MTR_5g018850	37.795	127	64	2	29	140	1359	1485	8.73e-19	82.0
MsG0280008944.01.T01	MTR_1g012910	37.719	114	63	2	33	140	374	485	1.27e-18	81.3
MsG0280008944.01.T01	MTR_1g008230	38.182	110	64	3	33	140	625	732	7.40e-18	79.3
MsG0280008944.01.T01	MTR_3g091310	37.615	109	66	2	33	140	932	1039	7.66e-18	79.3
MsG0280008944.01.T01	MTR_3g091310	37.615	109	66	2	33	140	838	945	7.82e-18	79.3
MsG0280008944.01.T01	MTR_1g008230	38.182	110	64	3	33	140	903	1010	8.42e-18	79.0
MsG0280008944.01.T01	MTR_4g132610	37.008	127	65	2	29	140	899	1025	1.90e-17	78.2
MsG0280008944.01.T01	MTR_4g010830	33.939	165	62	6	20	141	792	952	2.45e-17	77.8
MsG0280008944.01.T01	MTR_8g078490	36.220	127	66	2	29	140	1105	1231	2.60e-17	77.8
MsG0280008944.01.T01	MTR_8g078505	36.800	125	66	2	29	140	393	517	2.63e-17	77.4
MsG0280008944.01.T01	MTR_7g117355	37.615	109	66	2	33	140	833	940	3.40e-17	77.4
MsG0280008944.01.T01	MTR_5g013420	35.252	139	64	4	29	141	923	1061	4.38e-17	77.0
MsG0280008944.01.T01	MTR_5g013420	35.252	139	64	4	29	141	923	1061	4.60e-17	77.0
MsG0280008944.01.T01	MTR_5g016870	35.714	112	70	1	29	140	721	830	4.77e-17	77.0
MsG0280008944.01.T01	MTR_7g055660	35.965	114	69	2	29	141	589	699	1.05e-16	75.9
MsG0280008944.01.T01	MTR_8g027725	33.945	109	70	2	33	140	818	925	3.89e-16	74.3
MsG0280008944.01.T01	MTR_8g027725	33.945	109	70	2	33	140	803	910	4.03e-16	74.3
MsG0280008944.01.T01	MTR_1g012890	35.088	114	66	2	33	140	234	345	6.34e-16	73.2
MsG0280008944.01.T01	MTR_1g086980	32.143	112	74	1	29	140	489	598	1.09e-15	72.8
MsG0280008944.01.T01	MTR_1g086980	32.143	112	74	1	29	140	617	726	1.11e-15	72.8
MsG0280008944.01.T01	MTR_1g086980	32.143	112	74	1	29	140	638	747	1.16e-15	72.8
MsG0280008944.01.T01	MTR_1g086980	32.143	112	74	1	29	140	679	788	1.20e-15	72.8
MsG0280008944.01.T01	MTR_1g086980	32.143	112	74	1	29	140	689	798	1.20e-15	72.8
MsG0280008944.01.T01	MTR_1g086980	32.143	112	74	1	29	140	669	778	1.28e-15	72.8
MsG0280008944.01.T01	MTR_7g021365	36.697	109	68	1	33	140	916	1024	2.56e-15	72.0
MsG0280008944.01.T01	MTR_4g010550	34.899	149	66	5	20	141	292	436	7.96e-15	70.5
MsG0280008944.01.T01	MTR_7g450730	36.220	127	66	3	29	140	350	476	1.01e-12	64.3
MsG0280008944.01.T01	MTR_7g445600	37.719	114	52	4	29	138	257	355	1.02e-12	64.3
MsG0280008944.01.T01	MTR_7g109560	33.036	112	73	1	29	140	619	728	1.43e-12	63.9
MsG0280008944.01.T01	MTR_7g088370	33.065	124	65	2	33	138	555	678	4.38e-12	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008944.01.T01	AT4G30860	61.143	175	34	1	1	141	271	445	2.67e-71	222
MsG0280008944.01.T01	AT2G44150	64.602	113	40	0	29	141	123	235	1.42e-49	162
MsG0280008944.01.T01	AT3G59960	60.177	113	45	0	29	141	118	230	1.02e-45	150
MsG0280008944.01.T01	AT3G59960	60.177	113	45	0	29	141	118	230	1.02e-45	150
MsG0280008944.01.T01	AT3G59960	60.177	113	45	0	29	141	118	230	1.02e-45	150
MsG0280008944.01.T01	AT3G59960	60.177	113	45	0	29	141	118	230	4.70e-45	150
MsG0280008944.01.T01	AT1G77300	44.037	109	61	0	33	141	1037	1145	9.65e-29	110
MsG0280008944.01.T01	AT1G77300	44.037	109	61	0	33	141	1037	1145	1.30e-28	110
MsG0280008944.01.T01	AT1G76710	45.370	108	59	0	33	140	100	207	2.21e-26	103
MsG0280008944.01.T01	AT1G76710	45.370	108	59	0	33	140	100	207	2.21e-26	103
MsG0280008944.01.T01	AT1G76710	45.370	108	59	0	33	140	100	207	2.38e-26	103
MsG0280008944.01.T01	AT1G76710	45.370	108	59	0	33	140	100	207	2.56e-26	103
MsG0280008944.01.T01	AT5G42400	37.383	107	67	0	34	140	1261	1367	3.47e-23	94.7
MsG0280008944.01.T01	AT5G42400	37.383	107	67	0	34	140	1261	1367	3.47e-23	94.7
MsG0280008944.01.T01	AT5G42400	37.383	107	67	0	34	140	1261	1367	3.47e-23	94.7
MsG0280008944.01.T01	AT5G42400	37.383	107	67	0	34	140	1261	1367	3.47e-23	94.7
MsG0280008944.01.T01	AT5G42400	37.383	107	67	0	34	140	1261	1367	3.47e-23	94.7
MsG0280008944.01.T01	AT5G42400	37.383	107	67	0	34	140	1261	1367	3.47e-23	94.7
MsG0280008944.01.T01	AT5G42400	37.383	107	67	0	34	140	1261	1367	3.47e-23	94.7
MsG0280008944.01.T01	AT5G42400	37.383	107	67	0	34	140	1261	1367	3.47e-23	94.7
MsG0280008944.01.T01	AT4G27910	40.000	110	62	3	33	140	896	1003	3.16e-19	83.2
MsG0280008944.01.T01	AT1G02580	40.909	110	59	2	33	140	555	660	1.13e-17	78.6
MsG0280008944.01.T01	AT4G02020	33.929	112	72	1	29	140	714	823	2.26e-17	77.8
MsG0280008944.01.T01	AT2G23740	35.374	147	67	3	20	138	1209	1355	9.64e-17	76.3
MsG0280008944.01.T01	AT2G23740	35.374	147	67	3	20	138	1209	1355	9.64e-17	76.3
MsG0280008944.01.T01	AT2G23740	35.374	147	67	3	20	138	1209	1355	9.64e-17	76.3
MsG0280008944.01.T01	AT2G23740	35.374	147	67	3	20	138	1202	1348	1.01e-16	76.3
MsG0280008944.01.T01	AT3G61740	39.091	110	64	3	33	140	886	994	1.13e-16	75.9
MsG0280008944.01.T01	AT5G53430	37.615	109	66	2	33	140	912	1019	1.18e-16	75.9
MsG0280008944.01.T01	AT3G61740	39.091	110	64	3	33	140	850	958	1.18e-16	75.9
MsG0280008944.01.T01	AT2G23380	34.821	112	71	1	29	140	759	868	5.26e-16	73.9
MsG0280008944.01.T01	AT2G23380	34.821	112	71	1	29	140	532	641	5.44e-16	73.9
MsG0280008944.01.T01	AT2G35160	38.793	116	63	2	29	140	654	765	1.64e-15	72.4
MsG0280008944.01.T01	AT2G35160	38.793	116	63	2	29	140	654	765	1.64e-15	72.4
MsG0280008944.01.T01	AT2G35160	38.793	116	63	2	29	140	654	765	1.64e-15	72.4
MsG0280008944.01.T01	AT2G35160	38.793	116	63	2	29	140	654	765	1.64e-15	72.4
MsG0280008944.01.T01	AT2G35160	38.793	116	63	2	29	140	618	729	1.71e-15	72.4
MsG0280008944.01.T01	AT1G05830	35.455	110	68	2	33	140	930	1038	3.52e-15	71.6
MsG0280008944.01.T01	AT1G05830	35.455	110	68	2	33	140	930	1038	3.52e-15	71.6
MsG0280008944.01.T01	AT1G05830	35.455	110	68	2	33	140	930	1038	3.52e-15	71.6
MsG0280008944.01.T01	AT1G05830	35.455	110	68	2	33	140	930	1038	3.52e-15	71.6
MsG0280008944.01.T01	AT2G31650	36.364	110	67	2	33	140	909	1017	9.80e-15	70.5
MsG0280008944.01.T01	AT5G13960	34.286	140	61	4	33	141	457	596	4.31e-11	59.7
MsG0280008944.01.T01	AT5G13960	34.286	140	61	4	33	141	323	462	4.38e-11	59.7
MsG0280008944.01.T01	AT1G04050	35.593	118	64	4	33	138	578	695	6.00e-11	59.3
MsG0280008944.01.T01	AT1G04050	35.593	118	64	4	33	138	578	695	6.00e-11	59.3
MsG0280008944.01.T01	AT1G04050	35.593	118	64	4	33	138	474	591	6.54e-11	59.3

Find 21 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAGTTTATAATTGAGTATAT+TGG	0.295105	2:-41986377	MsG0280008944.01.T01:CDS
CCACTTCTCCAAAACACAAT+TGG	0.330110	2:+41985994	None:intergenic
CTTTATGTGAACAAAGGCTT+TGG	0.359165	2:-41986132	MsG0280008944.01.T01:CDS
CTGTGATCCCAATTGTGTTT+TGG	0.364566	2:-41986002	MsG0280008944.01.T01:CDS
GCTTTGGGACATGAAATATA+AGG	0.372894	2:-41986116	MsG0280008944.01.T01:CDS
AGCCATTGACATACGATTAC+AGG	0.429757	2:-41985534	MsG0280008944.01.T01:CDS
CACTTCTCCAAAACACAATT+GGG	0.454841	2:+41985995	None:intergenic
TTTATGTGAACAAAGGCTTT+GGG	0.456264	2:-41986131	MsG0280008944.01.T01:CDS
ACAATAGATGCAACTTTCAA+AGG	0.468582	2:-41986052	MsG0280008944.01.T01:CDS
ACACGCATTGGTGTATTTGC+TGG	0.475579	2:-41985577	MsG0280008944.01.T01:CDS
CTTTGGGACATGAAATATAA+GGG	0.484978	2:-41986115	MsG0280008944.01.T01:CDS
GCTGGTCGTTCAATAGAAGT+TGG	0.492356	2:-41985559	MsG0280008944.01.T01:CDS
CACAATTGGGATCACAGCTA+TGG	0.531828	2:+41986008	None:intergenic
GCTGTTGAAACAATTGAGAA+AGG	0.536186	2:-41986401	MsG0280008944.01.T01:CDS
AGTGATGTCGATGATGATGT+TGG	0.536778	2:-41987657	MsG0280008944.01.T01:CDS
TACCTGTAATCGTATGTCAA+TGG	0.542756	2:+41985532	None:intergenic
ATAATTGAGTATATTGGAGA+AGG	0.543225	2:-41986371	MsG0280008944.01.T01:intron
GTGATGTCGATGATGATGTT+GGG	0.576236	2:-41987656	MsG0280008944.01.T01:CDS
AGAGCAAGTAGAACTGCAGT+TGG	0.609503	2:+41987629	None:intergenic
ATGATGCTTTATGTGAACAA+AGG	0.611648	2:-41986138	MsG0280008944.01.T01:CDS
GTAGATGGTGAAACACGCAT+TGG	0.665236	2:-41985589	MsG0280008944.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CTATAAAAGATTAATTTAAA+AGG	+	Chr2:41985651-41985670	None:intergenic	10.0%
!!!	AATTTTAATATTTCATAAGT+TGG	-	Chr2:41986496-41986515	MsG0280008944.01.T01:intron	10.0%
!!!	AATTTTTCTTAGTATAAAAA+TGG	-	Chr2:41987509-41987528	MsG0280008944.01.T01:intron	10.0%
!!!	ATTTTAATATTTCATAAGTT+GGG	-	Chr2:41986497-41986516	MsG0280008944.01.T01:intron	10.0%
!!!	CTTTTAAATTAATCTTTTAT+AGG	-	Chr2:41985649-41985668	MsG0280008944.01.T01:intron	10.0%
!!!	TTTTAAGTATATATTTTTTG+GGG	-	Chr2:41986693-41986712	MsG0280008944.01.T01:intron	10.0%
!!	ACATAATATTATTACTTATC+AGG	-	Chr2:41986536-41986555	MsG0280008944.01.T01:intron	15.0%
!!	ATAGAATAATAGAATTAGTT+GGG	-	Chr2:41985908-41985927	MsG0280008944.01.T01:intron	15.0%
!!	CATAATATTATTACTTATCA+GGG	-	Chr2:41986537-41986556	MsG0280008944.01.T01:intron	15.0%
!!	TATAGAATAATAGAATTAGT+TGG	-	Chr2:41985907-41985926	MsG0280008944.01.T01:intron	15.0%
!!!	AAAAATGTATAGTTTGATTT+TGG	+	Chr2:41987567-41987586	None:intergenic	15.0%
!!!	AAAGTATTATTTCATAAGTT+GGG	-	Chr2:41986458-41986477	MsG0280008944.01.T01:intron	15.0%
!!	AATAATGTTGGCAAATATAA+AGG	+	Chr2:41986182-41986201	None:intergenic	20.0%
!!	ATTTAAAAGGAAATAAAGAG+TGG	+	Chr2:41985638-41985657	None:intergenic	20.0%
!!	CAACTTATGAAATAATACTT+TGG	+	Chr2:41986459-41986478	None:intergenic	20.0%
!!	GAGTTTATAATTGAGTATAT+TGG	-	Chr2:41986829-41986848	MsG0280008944.01.T01:intron	20.0%
!!	TAGATTATAGTATGAAAGAA+GGG	+	Chr2:41986909-41986928	None:intergenic	20.0%
!!	TTAGATTATAGTATGAAAGA+AGG	+	Chr2:41986910-41986929	None:intergenic	20.0%
!!	TTCCAAATTTAGCAATAATT+TGG	+	Chr2:41987328-41987347	None:intergenic	20.0%
!!	TTTATAGGTGTAAATAATGT+AGG	-	Chr2:41985664-41985683	MsG0280008944.01.T01:intron	20.0%
!!	TTTATATTTGCCAACATTAT+TGG	-	Chr2:41986181-41986200	MsG0280008944.01.T01:intron	20.0%
!!!	AAAAAATATCATTTTCTCGA+AGG	+	Chr2:41986211-41986230	None:intergenic	20.0%
!!!	ATTTTTTCCTTGCAAATTTT+AGG	+	Chr2:41987378-41987397	None:intergenic	20.0%
!!!	CAAAGTATTATTTCATAAGT+TGG	-	Chr2:41986457-41986476	MsG0280008944.01.T01:intron	20.0%
!!!	CATTTTTGCTAAAACTATTA+TGG	-	Chr2:41987580-41987599	MsG0280008944.01.T01:intron	20.0%
!!!	GACATATTTTATGTTTTCTA+CGG	+	Chr2:41985883-41985902	None:intergenic	20.0%
!	AAGGAAATATAAGATGTGAT+TGG	+	Chr2:41986381-41986400	None:intergenic	25.0%
!	AGATTATAGTATGAAAGAAG+GGG	+	Chr2:41986908-41986927	None:intergenic	25.0%
!	ATAATTGAGTATATTGGAGA+AGG	-	Chr2:41986835-41986854	MsG0280008944.01.T01:intron	25.0%
!	CAAATTTACCTTACAATACA+AGG	-	Chr2:41987468-41987487	MsG0280008944.01.T01:intron	25.0%
!	CACCAAATTATTGCTAAATT+TGG	-	Chr2:41987323-41987342	MsG0280008944.01.T01:intron	25.0%
!	GACTGAAATCGATAATATAT+CGG	+	Chr2:41985730-41985749	None:intergenic	25.0%
!	TAATTACAACTACAATGACA+AGG	+	Chr2:41986400-41986419	None:intergenic	25.0%
!	TTACAATACAAGGAAATAAC+TGG	-	Chr2:41987478-41987497	MsG0280008944.01.T01:intron	25.0%
!!	AGTTATTTCCTTGTATTGTA+AGG	+	Chr2:41987479-41987498	None:intergenic	25.0%
!!	ATTTTTACATGTGTGAGATT+CGG	-	Chr2:41987122-41987141	MsG0280008944.01.T01:intron	25.0%
!!	TATAAAATGCCATTTATCCA+AGG	-	Chr2:41986950-41986969	MsG0280008944.01.T01:intron	25.0%
!!!	AAACTATTATGGTTTTTTCC+AGG	-	Chr2:41987591-41987610	MsG0280008944.01.T01:intron	25.0%
!!!	AGAAAACATTTCTGGTTAAA+TGG	+	Chr2:41987035-41987054	None:intergenic	25.0%
!!!	CATTATGTTACTACTTTTCA+AGG	-	Chr2:41987273-41987292	MsG0280008944.01.T01:intron	25.0%
!!!	GGAAGTATTTGTATAAATTG+GGG	-	Chr2:41985929-41985948	MsG0280008944.01.T01:intron	25.0%
!!!	GGGAAGTATTTGTATAAATT+GGG	-	Chr2:41985928-41985947	MsG0280008944.01.T01:intron	25.0%
!!!	TATAGTTTGATTTTGGCAAA+TGG	+	Chr2:41987560-41987579	None:intergenic	25.0%
!!!	TGGGAAGTATTTGTATAAAT+TGG	-	Chr2:41985927-41985946	MsG0280008944.01.T01:intron	25.0%
	AAAACAAATCAGGATTGTCA+AGG	-	Chr2:41986630-41986649	MsG0280008944.01.T01:intron	30.0%
	AAATGGAGACAAATCTGTAT+TGG	-	Chr2:41987526-41987545	MsG0280008944.01.T01:intron	30.0%
	AACTAATTCTCCCTTAAGTT+AGG	+	Chr2:41986304-41986323	None:intergenic	30.0%
	AAGAAAAAACACGTTTACTG+AGG	+	Chr2:41986064-41986083	None:intergenic	30.0%
	AATGGAGACAAATCTGTATT+GGG	-	Chr2:41987527-41987546	MsG0280008944.01.T01:intron	30.0%
	ACAATAGATGCAACTTTCAA+AGG	-	Chr2:41987154-41987173	MsG0280008944.01.T01:intron	30.0%
	ACTGAGGAAATATGAAGAAT+AGG	+	Chr2:41986048-41986067	None:intergenic	30.0%
	ATATCGGATATAGAACCAAA+AGG	+	Chr2:41985714-41985733	None:intergenic	30.0%
	ATGATGCTTTATGTGAACAA+AGG	-	Chr2:41987068-41987087	MsG0280008944.01.T01:intron	30.0%
	ATTTGCACCTAAAATTTGCA+AGG	-	Chr2:41987368-41987387	MsG0280008944.01.T01:intron	30.0%
	GTTGTAAAACAAACATGCTT+TGG	-	Chr2:41986420-41986439	MsG0280008944.01.T01:CDS	30.0%
	TAACTTAAGGGAGAATTAGT+TGG	-	Chr2:41986303-41986322	MsG0280008944.01.T01:intron	30.0%
	TACAACCTATCTAATCCATA+GGG	+	Chr2:41985858-41985877	None:intergenic	30.0%
	TATCCAAGTCAAAGATGAAT+GGG	+	Chr2:41986159-41986178	None:intergenic	30.0%
	TATCGGATATAGAACCAAAA+GGG	+	Chr2:41985713-41985732	None:intergenic	30.0%
	TCACTTCATTCCTAACTTAA+GGG	-	Chr2:41986291-41986310	MsG0280008944.01.T01:intron	30.0%
	TTTATGTGAACAAAGGCTTT+GGG	-	Chr2:41987075-41987094	MsG0280008944.01.T01:intron	30.0%
!	TTTAGTTGAAAAAGCCCTTT+TGG	-	Chr2:41985696-41985715	MsG0280008944.01.T01:intron	30.0%
!!	ATTTGTTTTTCCCTTCGAAA+TGG	+	Chr2:41986619-41986638	None:intergenic	30.0%
!!	CTTTGGGACATGAAATATAA+GGG	-	Chr2:41987091-41987110	MsG0280008944.01.T01:intron	30.0%
!!	GCTCTGAAAATTGTAGTAAT+CGG	-	Chr2:41986593-41986612	MsG0280008944.01.T01:intron	30.0%
!!	TTGATAGTGTATGCATTTGT+CGG	+	Chr2:41987451-41987470	None:intergenic	30.0%
!!	TTTCTGGTTAAATGGAGAAA+CGG	+	Chr2:41987027-41987046	None:intergenic	30.0%
!!	TTTTGTTATCCTAGACATGA+AGG	-	Chr2:41985758-41985777	MsG0280008944.01.T01:intron	30.0%
	ACTGCAACAGAAAACATTTC+TGG	+	Chr2:41987043-41987062	None:intergenic	35.0%
	AGCATGCTCACATTAACAAA+GGG	+	Chr2:41986241-41986260	None:intergenic	35.0%
	ATATCAGGCATACAACAACA+GGG	+	Chr2:41986345-41986364	None:intergenic	35.0%
	CACTTCTCCAAAACACAATT+GGG	+	Chr2:41987214-41987233	None:intergenic	35.0%
	CTCACTTCATTCCTAACTTA+AGG	-	Chr2:41986290-41986309	MsG0280008944.01.T01:intron	35.0%
	CTTAAGTTAGGAATGAAGTG+AGG	+	Chr2:41986292-41986311	None:intergenic	35.0%
	CTTTATGTGAACAAAGGCTT+TGG	-	Chr2:41987074-41987093	MsG0280008944.01.T01:intron	35.0%
	GCTGTTGAAACAATTGAGAA+AGG	-	Chr2:41986805-41986824	MsG0280008944.01.T01:intron	35.0%
	GGTACTTGTAGATAGATATC+AGG	+	Chr2:41986360-41986379	None:intergenic	35.0%
	GTACAACCTATCTAATCCAT+AGG	+	Chr2:41985859-41985878	None:intergenic	35.0%
	GTATCCAAGTCAAAGATGAA+TGG	+	Chr2:41986160-41986179	None:intergenic	35.0%
	TACCTGTAATCGTATGTCAA+TGG	+	Chr2:41987677-41987696	None:intergenic	35.0%
	TATGACTTTCAAGACATCCT+TGG	+	Chr2:41986970-41986989	None:intergenic	35.0%
	TCAAGACATCCTTGGATAAA+TGG	+	Chr2:41986962-41986981	None:intergenic	35.0%
	TTCGAAGGGAAAAACAAATC+AGG	-	Chr2:41986620-41986639	MsG0280008944.01.T01:intron	35.0%
	TTTAGGTGCAAATCACTATC+AGG	+	Chr2:41987361-41987380	None:intergenic	35.0%
!	TCCTTTTGTGAATAAAGCAG+TGG	-	Chr2:41985990-41986009	MsG0280008944.01.T01:intron	35.0%
!!	AGTCTTGTTGAGTATTTGCT+AGG	+	Chr2:41986107-41986126	None:intergenic	35.0%
!!	CGAAGGTATTCCAATAATGT+TGG	+	Chr2:41986194-41986213	None:intergenic	35.0%
!!	GCTTTGGGACATGAAATATA+AGG	-	Chr2:41987090-41987109	MsG0280008944.01.T01:intron	35.0%
!!	TAGCAATAATTTGGTGCTGT+AGG	+	Chr2:41987319-41987338	None:intergenic	35.0%
	AAGGTCTACAGAGATATGGA+TGG	-	Chr2:41985777-41985796	MsG0280008944.01.T01:intron	40.0%
	AGCCATTGACATACGATTAC+AGG	-	Chr2:41987672-41987691	MsG0280008944.01.T01:CDS	40.0%
	ATGTGAGCATGCTCTGATAT+AGG	-	Chr2:41986248-41986267	MsG0280008944.01.T01:intron	40.0%
	CATGAAGGTCTACAGAGATA+TGG	-	Chr2:41985773-41985792	MsG0280008944.01.T01:intron	40.0%
	CCACTTCTCCAAAACACAAT+TGG	+	Chr2:41987215-41987234	None:intergenic	40.0%
	CTATCTAATCCATAGGGTGA+AGG	+	Chr2:41985852-41985871	None:intergenic	40.0%
	CTATGTTTACCTTCACCCTA+TGG	-	Chr2:41985840-41985859	MsG0280008944.01.T01:intron	40.0%
	GAGCATGCTCACATTAACAA+AGG	+	Chr2:41986242-41986261	None:intergenic	40.0%
	GATATCAGGCATACAACAAC+AGG	+	Chr2:41986346-41986365	None:intergenic	40.0%
	GCTCTAATGATTGTGTATGC+AGG	-	Chr2:41985595-41985614	MsG0280008944.01.T01:CDS	40.0%
	TAGTAATCGGCCATTTCGAA+GGG	-	Chr2:41986606-41986625	MsG0280008944.01.T01:intron	40.0%
	TATCAGGCATACAACAACAG+GGG	+	Chr2:41986344-41986363	None:intergenic	40.0%
	TCAATGCATAAGCTGCTCAA+AGG	-	Chr2:41986561-41986580	MsG0280008944.01.T01:intron	40.0%
!	AATGGGAGCATGTTGTATGT+TGG	+	Chr2:41986142-41986161	None:intergenic	40.0%
!	AGTGATGTCGATGATGATGT+TGG	-	Chr2:41985549-41985568	MsG0280008944.01.T01:CDS	40.0%
!	CTGTGATCCCAATTGTGTTT+TGG	-	Chr2:41987204-41987223	MsG0280008944.01.T01:intron	40.0%
!	GCCACTGCTTTATTCACAAA+AGG	+	Chr2:41985994-41986013	None:intergenic	40.0%
!	GTGATGTCGATGATGATGTT+GGG	-	Chr2:41985550-41985569	MsG0280008944.01.T01:CDS	40.0%
!	TGTACTCAGACTGAGTTTTG+TGG	-	Chr2:41986769-41986788	MsG0280008944.01.T01:intron	40.0%
!!	CTTCACCCTATGGATTAGAT+AGG	-	Chr2:41985850-41985869	MsG0280008944.01.T01:intron	40.0%
!!	TCAGACTGAGTTTTGTGGAT+GGG	-	Chr2:41986774-41986793	MsG0280008944.01.T01:intron	40.0%
!!!	CACTACGCTTTTTCTTCACT+AGG	+	Chr2:41985533-41985552	None:intergenic	40.0%
!!!	CCAATTGTGTTTTGGAGAAG+TGG	-	Chr2:41987212-41987231	MsG0280008944.01.T01:intron	40.0%
!!!	GTTTTTTCCAGGCAAGTAGA+TGG	-	Chr2:41987602-41987621	MsG0280008944.01.T01:intron	40.0%
	AGAGCAAGTAGAACTGCAGT+TGG	+	Chr2:41985580-41985599	None:intergenic	45.0%
	ATCAAGAGCAAGTACAGCAG+AGG	+	Chr2:41987250-41987269	None:intergenic	45.0%
	CACAATTGGGATCACAGCTA+TGG	+	Chr2:41987201-41987220	None:intergenic	45.0%
	CTCTGTAGACCTTCATGTCT+AGG	+	Chr2:41985770-41985789	None:intergenic	45.0%
	GAGACAAATCTGTATTGGGC+TGG	-	Chr2:41987531-41987550	MsG0280008944.01.T01:intron	45.0%
	GCTCCCATTCATCTTTGACT+TGG	-	Chr2:41986153-41986172	MsG0280008944.01.T01:intron	45.0%
	GCTGGTCGTTCAATAGAAGT+TGG	-	Chr2:41987647-41987666	MsG0280008944.01.T01:CDS	45.0%
	GTAGATGGTGAAACACGCAT+TGG	-	Chr2:41987617-41987636	MsG0280008944.01.T01:intron	45.0%
	GTAGTAATCGGCCATTTCGA+AGG	-	Chr2:41986605-41986624	MsG0280008944.01.T01:intron	45.0%
	TAAGCTGCTCAAAGGCTTGT+CGG	-	Chr2:41986569-41986588	MsG0280008944.01.T01:intron	45.0%
	TGTTTCACCATCTACTTGCC+TGG	+	Chr2:41987612-41987631	None:intergenic	45.0%
!	ACAAATCTGTATTGGGCTGG+AGG	-	Chr2:41987534-41987553	MsG0280008944.01.T01:intron	45.0%
!	ACACGCATTGGTGTATTTGC+TGG	-	Chr2:41987629-41987648	MsG0280008944.01.T01:CDS	45.0%
!!	CAGACTGAGTTTTGTGGATG+GGG	-	Chr2:41986775-41986794	MsG0280008944.01.T01:intron	45.0%
!!	CTCAGACTGAGTTTTGTGGA+TGG	-	Chr2:41986773-41986792	MsG0280008944.01.T01:intron	45.0%
!!!	ATTTTTAAGTATATATTTTT+TGG	-	Chr2:41986691-41986710	MsG0280008944.01.T01:intron	5.0%
!!!	TTTTTAAGTATATATTTTTT+GGG	-	Chr2:41986692-41986711	MsG0280008944.01.T01:intron	5.0%
!	AGCAGTGGCTCTGTTGTAGA+AGG	-	Chr2:41986005-41986024	MsG0280008944.01.T01:CDS	50.0%
!	AGTGGCTCTGTTGTAGAAGG+GGG	-	Chr2:41986008-41986027	MsG0280008944.01.T01:CDS	50.0%
!	CAGTGGCTCTGTTGTAGAAG+GGG	-	Chr2:41986007-41986026	MsG0280008944.01.T01:CDS	50.0%
!	GCAGTGGCTCTGTTGTAGAA+GGG	-	Chr2:41986006-41986025	MsG0280008944.01.T01:CDS	50.0%
!	GTTTTGTGGATGGGGAGTTG+AGG	-	Chr2:41986783-41986802	MsG0280008944.01.T01:intron	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	41985525	41987703	41985525	ID=MsG0280008944.01;Name=MsG0280008944.01
Chr2	mRNA	41985525	41987703	41985525	ID=MsG0280008944.01.T01;Parent=MsG0280008944.01;Name=MsG0280008944.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|0.66\|0.75\|4\|0\|141
Chr2	exon	41987620	41987703	41987620	ID=MsG0280008944.01.T01:exon:29506;Parent=MsG0280008944.01.T01
Chr2	exon	41986372	41986450	41986372	ID=MsG0280008944.01.T01:exon:29507;Parent=MsG0280008944.01.T01
Chr2	exon	41985995	41986166	41985995	ID=MsG0280008944.01.T01:exon:29508;Parent=MsG0280008944.01.T01
Chr2	exon	41985525	41985615	41985525	ID=MsG0280008944.01.T01:exon:29509;Parent=MsG0280008944.01.T01
Chr2	CDS	41987620	41987703	41987620	ID=MsG0280008944.01.T01:cds;Parent=MsG0280008944.01.T01
Chr2	CDS	41986372	41986450	41986372	ID=MsG0280008944.01.T01:cds;Parent=MsG0280008944.01.T01
Chr2	CDS	41985995	41986166	41985995	ID=MsG0280008944.01.T01:cds;Parent=MsG0280008944.01.T01
Chr2	CDS	41985525	41985615	41985525	ID=MsG0280008944.01.T01:cds;Parent=MsG0280008944.01.T01

Gene Sequence

>MsG0280008944.01.T01

ATGTACCTAGTGAAGAAAAAGCGTAGTGATGTCGATGATGATGTTGGGTGCACCAACTGCAGTTCTACTTGCTCTAATGATTGTACTGAGTTTTGTGGATGGGGAGTTGAGGCTGTTGAAACAATTGAGAAAGGAGAGTTTATAATTGAGTATATTGGAGAAGTTATTGATGATGCTTTATGTGAACAAAGGCTTTGGGACATGAAATATAAGGGTGTGCAGAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATTCATCACGCTTTTTAAACCATAGCTGTGATCCCAATTGTGTTTTGGAGAAGTGGCAAGTAGATGGTGAAACACGCATTGGTGTATTTGCTGGTCGTTCAATAGAAGTTGGAGAGCCATTGACATACGATTACAGGTATGTTTGA

Protein sequence

>MsG0280008944.01.T01

MYLVKKKRSDVDDDVGCTNCSSTCSNDCTEFCGWGVEAVETIEKGEFIIEYIGEVIDDALCEQRLWDMKYKGVQNFYMCEIRKDFTIDATFKGNSSRFLNHSCDPNCVLEKWQVDGETRIGVFAGRSIEVGEPLTYDYRYV*