Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009764.01.T01 | XP_027344288.1 | 61.497 | 187 | 34 | 1 | 1 | 149 | 1 | 187 | 4.34E-76 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009764.01.T01 | P49332 | 68.293 | 123 | 39 | 0 | 27 | 149 | 94 | 216 | 1.01E-58 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009764.01.T01 | A0A396JBJ3 | 87.402 | 127 | 16 | 0 | 26 | 152 | 108 | 234 | 2.34e-76 | 236 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180006047.01 | MsG0280009764.01 | 0.830216 | 3.326713e-55 | 3.482715e-52 |
| MsG0280009764.01 | MsG0380015373.01 | 0.801322 | 9.510558e-49 | 4.528614e-46 |
| MsG0280009764.01 | MsG0580026085.01 | 0.813561 | 2.404632e-51 | 1.575552e-48 |
| MsG0280009764.01 | MsG0780038925.01 | 0.825852 | 3.738973e-54 | 3.448755e-51 |
| MsG0280009764.01 | MsG0780039877.01 | 0.809689 | 1.671146e-50 | 9.877780e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009764.01.T01 | MTR_2g070180 | 87.402 | 127 | 16 | 0 | 26 | 152 | 91 | 217 | 1.24e-79 | 234 |
| MsG0280009764.01.T01 | MTR_2g070140 | 84.677 | 124 | 19 | 0 | 26 | 149 | 75 | 198 | 8.37e-78 | 229 |
| MsG0280009764.01.T01 | MTR_2g070150 | 88.596 | 114 | 13 | 0 | 26 | 139 | 91 | 204 | 1.35e-73 | 219 |
| MsG0280009764.01.T01 | MTR_2g070210 | 72.581 | 124 | 34 | 0 | 26 | 149 | 93 | 216 | 8.10e-67 | 202 |
| MsG0280009764.01.T01 | MTR_2g070130 | 70.635 | 126 | 37 | 0 | 26 | 151 | 91 | 216 | 5.99e-66 | 200 |
| MsG0280009764.01.T01 | MTR_2g070200 | 70.543 | 129 | 35 | 3 | 26 | 151 | 91 | 219 | 1.52e-62 | 191 |
| MsG0280009764.01.T01 | MTR_3g467420 | 57.258 | 124 | 53 | 0 | 26 | 149 | 96 | 219 | 2.33e-52 | 166 |
| MsG0280009764.01.T01 | MTR_2g070060 | 54.839 | 124 | 56 | 0 | 27 | 150 | 92 | 215 | 7.14e-51 | 162 |
| MsG0280009764.01.T01 | MTR_3g467430 | 56.452 | 124 | 54 | 0 | 26 | 149 | 96 | 219 | 1.16e-49 | 159 |
| MsG0280009764.01.T01 | MTR_2g070070 | 56.452 | 124 | 54 | 0 | 27 | 150 | 92 | 215 | 9.29e-47 | 151 |
| MsG0280009764.01.T01 | MTR_8g056940 | 55.645 | 124 | 55 | 0 | 26 | 149 | 91 | 214 | 2.56e-45 | 147 |
| MsG0280009764.01.T01 | MTR_2g070110 | 55.645 | 124 | 54 | 1 | 27 | 150 | 92 | 214 | 1.56e-44 | 145 |
| MsG0280009764.01.T01 | MTR_5g076900 | 50.000 | 124 | 62 | 0 | 28 | 151 | 95 | 218 | 1.96e-42 | 140 |
| MsG0280009764.01.T01 | MTR_4g124130 | 48.413 | 126 | 65 | 0 | 24 | 149 | 90 | 215 | 6.52e-40 | 134 |
| MsG0280009764.01.T01 | MTR_2g070120 | 43.902 | 123 | 69 | 0 | 26 | 148 | 91 | 213 | 1.90e-34 | 120 |
| MsG0280009764.01.T01 | MTR_5g037380 | 32.824 | 131 | 81 | 3 | 24 | 147 | 92 | 222 | 3.52e-15 | 70.1 |
| MsG0280009764.01.T01 | MTR_8g087410 | 30.000 | 120 | 82 | 1 | 26 | 143 | 92 | 211 | 3.81e-13 | 64.7 |
| MsG0280009764.01.T01 | MTR_8g087425 | 30.159 | 126 | 86 | 1 | 27 | 150 | 92 | 217 | 1.67e-12 | 62.8 |
| MsG0280009764.01.T01 | MTR_7g065720 | 28.689 | 122 | 82 | 3 | 26 | 143 | 93 | 213 | 2.78e-12 | 62.4 |
| MsG0280009764.01.T01 | MTR_1g090060 | 32.000 | 125 | 81 | 3 | 27 | 147 | 90 | 214 | 4.02e-12 | 62.0 |
| MsG0280009764.01.T01 | MTR_4g043640 | 52.381 | 42 | 20 | 0 | 83 | 124 | 44 | 85 | 5.59e-12 | 58.5 |
| MsG0280009764.01.T01 | MTR_6g080440 | 28.926 | 121 | 82 | 2 | 26 | 143 | 89 | 208 | 6.75e-12 | 61.2 |
| MsG0280009764.01.T01 | MTR_7g065630 | 30.579 | 121 | 76 | 4 | 26 | 143 | 111 | 226 | 1.49e-11 | 60.5 |
| MsG0280009764.01.T01 | MTR_4g019780 | 31.405 | 121 | 77 | 4 | 27 | 143 | 95 | 213 | 9.40e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009764.01.T01 | AT1G78380 | 61.789 | 123 | 47 | 0 | 27 | 149 | 92 | 214 | 7.13e-55 | 172 |
| MsG0280009764.01.T01 | AT1G17180 | 58.871 | 124 | 51 | 0 | 26 | 149 | 91 | 214 | 6.20e-54 | 170 |
| MsG0280009764.01.T01 | AT1G78360 | 60.484 | 124 | 49 | 0 | 26 | 149 | 92 | 215 | 3.19e-53 | 168 |
| MsG0280009764.01.T01 | AT1G78370 | 60.000 | 125 | 50 | 0 | 27 | 151 | 92 | 216 | 1.11e-52 | 166 |
| MsG0280009764.01.T01 | AT1G78320 | 44.920 | 187 | 65 | 1 | 1 | 149 | 1 | 187 | 2.00e-52 | 165 |
| MsG0280009764.01.T01 | AT1G53680 | 53.543 | 127 | 57 | 2 | 25 | 149 | 93 | 219 | 1.68e-47 | 153 |
| MsG0280009764.01.T01 | AT1G17170 | 54.839 | 124 | 55 | 1 | 26 | 149 | 91 | 213 | 3.63e-47 | 152 |
| MsG0280009764.01.T01 | AT1G78320 | 54.032 | 124 | 57 | 0 | 26 | 149 | 91 | 214 | 4.25e-46 | 150 |
| MsG0280009764.01.T01 | AT1G78340 | 51.613 | 124 | 60 | 0 | 26 | 149 | 91 | 214 | 6.20e-45 | 147 |
| MsG0280009764.01.T01 | AT3G43800 | 44.681 | 141 | 77 | 1 | 11 | 150 | 80 | 220 | 2.51e-42 | 140 |
| MsG0280009764.01.T01 | AT1G17190 | 45.968 | 124 | 67 | 0 | 26 | 149 | 92 | 215 | 2.11e-39 | 132 |
| MsG0280009764.01.T01 | AT3G09270 | 33.621 | 116 | 75 | 1 | 27 | 140 | 95 | 210 | 5.93e-14 | 67.0 |
| MsG0280009764.01.T01 | AT2G29420 | 29.167 | 120 | 83 | 1 | 27 | 144 | 96 | 215 | 1.80e-13 | 65.5 |
| MsG0280009764.01.T01 | AT2G29470 | 28.800 | 125 | 84 | 3 | 27 | 147 | 95 | 218 | 6.60e-13 | 63.9 |
| MsG0280009764.01.T01 | AT1G10360 | 28.906 | 128 | 84 | 3 | 27 | 147 | 94 | 221 | 2.64e-12 | 62.4 |
| MsG0280009764.01.T01 | AT2G29480 | 29.915 | 117 | 77 | 3 | 27 | 139 | 94 | 209 | 2.56e-11 | 59.7 |
| MsG0280009764.01.T01 | AT2G29440 | 33.051 | 118 | 74 | 3 | 26 | 139 | 92 | 208 | 3.50e-11 | 59.3 |
| MsG0280009764.01.T01 | AT2G29490 | 28.125 | 128 | 87 | 3 | 27 | 150 | 94 | 220 | 4.75e-11 | 58.9 |
| MsG0280009764.01.T01 | AT1G59700 | 28.906 | 128 | 84 | 3 | 27 | 147 | 96 | 223 | 9.33e-11 | 58.5 |
Find 44 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGAGACCGGACTTATTT+TGG | 0.184590 | 2:-57692232 | MsG0280009764.01.T01:CDS |
| GACATCTATGAATTCTTTCT+TGG | 0.270245 | 2:+57692276 | None:intergenic |
| CAAATTGTTGGAGCAAGAAT+TGG | 0.293479 | 2:-57692251 | MsG0280009764.01.T01:CDS |
| AAGTGATTCTGCTTGATTCC+TGG | 0.317076 | 2:-57692855 | MsG0280009764.01.T01:CDS |
| TTTAAAAGCTATGAGACCTT+TGG | 0.358405 | 2:-57692157 | MsG0280009764.01.T01:CDS |
| AAGGAACCTTTGGGCCAAAA+AGG | 0.360471 | 2:-57692317 | MsG0280009764.01.T01:CDS |
| GATTCCTGGGCAAGTCCATT+TGG | 0.366880 | 2:-57692841 | MsG0280009764.01.T01:CDS |
| CATAGATGTCCTCAAATTGT+TGG | 0.381980 | 2:-57692263 | MsG0280009764.01.T01:CDS |
| ATGAAGGTGGAAGGAACCTT+TGG | 0.390594 | 2:-57692327 | MsG0280009764.01.T01:CDS |
| CACTTATTCCATTCTACACT+TGG | 0.395366 | 2:-57692180 | MsG0280009764.01.T01:CDS |
| ATTCTTGCTCCAACAATTTG+AGG | 0.395572 | 2:+57692254 | None:intergenic |
| TCATGGACCTTATCCTGATC+AGG | 0.413575 | 2:+57692049 | None:intergenic |
| CTCAATCTGCATACATCTCT+TGG | 0.415648 | 2:+57692090 | None:intergenic |
| AGAGATCACAAGCTAGGTTC+TGG | 0.428783 | 2:-57692600 | MsG0280009764.01.T01:CDS |
| TTGGACCAAGCAATGAACTT+AGG | 0.437629 | 2:+57692109 | None:intergenic |
| TTCAAAGTCACTCCCTGATC+AGG | 0.452471 | 2:-57692062 | MsG0280009764.01.T01:CDS |
| TGGACCAAGCAATGAACTTA+GGG | 0.476815 | 2:+57692110 | None:intergenic |
| AAATTGTTGGAGCAAGAATT+GGG | 0.479522 | 2:-57692250 | MsG0280009764.01.T01:CDS |
| AGTGATTCTGCTTGATTCCT+GGG | 0.480041 | 2:-57692854 | MsG0280009764.01.T01:CDS |
| GCTTGATACCCTTTCAGCTA+GGG | 0.481798 | 2:+57692801 | None:intergenic |
| TGCTTGATACCCTTTCAGCT+AGG | 0.489033 | 2:+57692800 | None:intergenic |
| CTCTAAATTGATGTTTCCAA+AGG | 0.489801 | 2:+57692141 | None:intergenic |
| GAGATCACAAGCTAGGTTCT+GGG | 0.491244 | 2:-57692599 | MsG0280009764.01.T01:CDS |
| CAGAATAGCCCTAGCTGAAA+GGG | 0.493572 | 2:-57692809 | MsG0280009764.01.T01:intron |
| AATGCCCTAAGTTCATTGCT+TGG | 0.495645 | 2:-57692114 | MsG0280009764.01.T01:CDS |
| GTCACTCCCTGATCAGGATA+AGG | 0.500395 | 2:-57692056 | MsG0280009764.01.T01:CDS |
| GGCTGATTATGTTGATAAGA+AGG | 0.507102 | 2:-57692578 | MsG0280009764.01.T01:intron |
| TGAAGGTGGAAGGAACCTTT+GGG | 0.507522 | 2:-57692326 | MsG0280009764.01.T01:CDS |
| ATTCTGAGTCTCATGCCAAA+TGG | 0.515676 | 2:+57692826 | None:intergenic |
| TGGAAACATCAATTTAGAGA+AGG | 0.525535 | 2:-57692137 | MsG0280009764.01.T01:CDS |
| AATGTCAAATAGATATATGA+AGG | 0.531559 | 2:-57692343 | MsG0280009764.01.T01:intron |
| ATTGTAGAGCTGAGGAAGAC+GGG | 0.532079 | 2:-57692022 | MsG0280009764.01.T01:CDS |
| CATGCCAAATGGACTTGCCC+AGG | 0.533387 | 2:+57692837 | None:intergenic |
| TATCTCCTCCAAAATAAGTC+CGG | 0.546574 | 2:+57692224 | None:intergenic |
| TCAGAATAGCCCTAGCTGAA+AGG | 0.549650 | 2:-57692810 | MsG0280009764.01.T01:CDS |
| CTTATCAGAGATCACAAGCT+AGG | 0.551577 | 2:-57692606 | MsG0280009764.01.T01:intron |
| TGGAGCAAGAATTGGGAGAC+CGG | 0.556673 | 2:-57692243 | MsG0280009764.01.T01:CDS |
| CATTGTAGAGCTGAGGAAGA+CGG | 0.561187 | 2:-57692023 | MsG0280009764.01.T01:CDS |
| AATAGATATATGAAGGTGGA+AGG | 0.568115 | 2:-57692336 | MsG0280009764.01.T01:intron |
| CAGAATCACTTCATCAGCCA+TGG | 0.592382 | 2:+57692867 | None:intergenic |
| TCAGCTCTACAATGTAGTCA+TGG | 0.600557 | 2:+57692032 | None:intergenic |
| CATGGACCTTATCCTGATCA+GGG | 0.606504 | 2:+57692050 | None:intergenic |
| GTCAAATAGATATATGAAGG+TGG | 0.608108 | 2:-57692340 | MsG0280009764.01.T01:intron |
| ATGACTACATTGTAGAGCTG+AGG | 0.637957 | 2:-57692030 | MsG0280009764.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAAAATAAAGTTTAA+CGG | + | Chr2:57692418-57692437 | None:intergenic | 10.0% |
| !! | AATGTCAAATAGATATATGA+AGG | - | Chr2:57692537-57692556 | MsG0280009764.01.T01:intron | 20.0% |
| !! | TAGTTTATATGAGACTTATA+TGG | - | Chr2:57692458-57692477 | MsG0280009764.01.T01:intron | 20.0% |
| AAATTGTTGGAGCAAGAATT+GGG | - | Chr2:57692630-57692649 | MsG0280009764.01.T01:intron | 30.0% | |
| AATAGATATATGAAGGTGGA+AGG | - | Chr2:57692544-57692563 | MsG0280009764.01.T01:intron | 30.0% | |
| AGCAACTAAAGATTCACAAT+AGG | + | Chr2:57692198-57692217 | None:intergenic | 30.0% | |
| CTCTAAATTGATGTTTCCAA+AGG | + | Chr2:57692742-57692761 | None:intergenic | 30.0% | |
| GACATCTATGAATTCTTTCT+TGG | + | Chr2:57692607-57692626 | None:intergenic | 30.0% | |
| GTCAAATAGATATATGAAGG+TGG | - | Chr2:57692540-57692559 | MsG0280009764.01.T01:intron | 30.0% | |
| TGGAAACATCAATTTAGAGA+AGG | - | Chr2:57692743-57692762 | MsG0280009764.01.T01:intron | 30.0% | |
| TTCAGTATATGATTGAGGTT+TGG | - | Chr2:57692219-57692238 | MsG0280009764.01.T01:CDS | 30.0% | |
| TTTAAAAGCTATGAGACCTT+TGG | - | Chr2:57692723-57692742 | MsG0280009764.01.T01:intron | 30.0% | |
| ! | CTTTTAAACCAAGTGTAGAA+TGG | + | Chr2:57692711-57692730 | None:intergenic | 30.0% |
| AGGGTCATTTGTAACAACAA+GGG | + | Chr2:57692137-57692156 | None:intergenic | 35.0% | |
| ATCCCTGTTCTGATTCATAA+CGG | - | Chr2:57692168-57692187 | MsG0280009764.01.T01:CDS | 35.0% | |
| ATTCTTGCTCCAACAATTTG+AGG | + | Chr2:57692629-57692648 | None:intergenic | 35.0% | |
| CAAATTGTTGGAGCAAGAAT+TGG | - | Chr2:57692629-57692648 | MsG0280009764.01.T01:intron | 35.0% | |
| CACTTATTCCATTCTACACT+TGG | - | Chr2:57692700-57692719 | MsG0280009764.01.T01:intron | 35.0% | |
| CATAGATGTCCTCAAATTGT+TGG | - | Chr2:57692617-57692636 | MsG0280009764.01.T01:intron | 35.0% | |
| TAAGGATCAGAAGGCAAAAA+AGG | + | Chr2:57692258-57692277 | None:intergenic | 35.0% | |
| TACCGTTATGAATCAGAACA+GGG | + | Chr2:57692173-57692192 | None:intergenic | 35.0% | |
| TATCTCCTCCAAAATAAGTC+CGG | + | Chr2:57692659-57692678 | None:intergenic | 35.0% | |
| TGCTGTTCAGTATATGATTG+AGG | - | Chr2:57692214-57692233 | MsG0280009764.01.T01:CDS | 35.0% | |
| TTACCGTTATGAATCAGAAC+AGG | + | Chr2:57692174-57692193 | None:intergenic | 35.0% | |
| ! | GGCTGATTATGTTGATAAGA+AGG | - | Chr2:57692302-57692321 | MsG0280009764.01.T01:CDS | 35.0% |
| !! | TATTTTGGAGGAGATAAGCT+TGG | - | Chr2:57692663-57692682 | MsG0280009764.01.T01:intron | 35.0% |
| AACAGGGATTTCTTGTGAAC+AGG | + | Chr2:57692157-57692176 | None:intergenic | 40.0% | |
| AAGTGATTCTGCTTGATTCC+TGG | - | Chr2:57692025-57692044 | MsG0280009764.01.T01:CDS | 40.0% | |
| AATGCCCTAAGTTCATTGCT+TGG | - | Chr2:57692766-57692785 | MsG0280009764.01.T01:intron | 40.0% | |
| ACAGGGATTTCTTGTGAACA+GGG | + | Chr2:57692156-57692175 | None:intergenic | 40.0% | |
| AGTGATTCTGCTTGATTCCT+GGG | - | Chr2:57692026-57692045 | MsG0280009764.01.T01:CDS | 40.0% | |
| ATGACTACATTGTAGAGCTG+AGG | - | Chr2:57692850-57692869 | MsG0280009764.01.T01:CDS | 40.0% | |
| ATTCTGAGTCTCATGCCAAA+TGG | + | Chr2:57692057-57692076 | None:intergenic | 40.0% | |
| CAGGGTCATTTGTAACAACA+AGG | + | Chr2:57692138-57692157 | None:intergenic | 40.0% | |
| CTCAATCTGCATACATCTCT+TGG | + | Chr2:57692793-57692812 | None:intergenic | 40.0% | |
| CTTATCAGAGATCACAAGCT+AGG | - | Chr2:57692274-57692293 | MsG0280009764.01.T01:CDS | 40.0% | |
| GATCTCTGATAAGGATCAGA+AGG | + | Chr2:57692267-57692286 | None:intergenic | 40.0% | |
| TCAGCTCTACAATGTAGTCA+TGG | + | Chr2:57692851-57692870 | None:intergenic | 40.0% | |
| TGGACCAAGCAATGAACTTA+GGG | + | Chr2:57692773-57692792 | None:intergenic | 40.0% | |
| TTGGACCAAGCAATGAACTT+AGG | + | Chr2:57692774-57692793 | None:intergenic | 40.0% | |
| ! | CTAGCTTGTGATCTCTGATA+AGG | + | Chr2:57692276-57692295 | None:intergenic | 40.0% |
| ! | TTCTTGCTCTTCTCCCTTTT+TGG | + | Chr2:57692580-57692599 | None:intergenic | 40.0% |
| AAGGAACCTTTGGGCCAAAA+AGG | - | Chr2:57692563-57692582 | MsG0280009764.01.T01:intron | 45.0% | |
| AGAGATCACAAGCTAGGTTC+TGG | - | Chr2:57692280-57692299 | MsG0280009764.01.T01:CDS | 45.0% | |
| AGGAACCTTTGGGCCAAAAA+GGG | - | Chr2:57692564-57692583 | MsG0280009764.01.T01:intron | 45.0% | |
| ATGAAGGTGGAAGGAACCTT+TGG | - | Chr2:57692553-57692572 | MsG0280009764.01.T01:intron | 45.0% | |
| ATTGTAGAGCTGAGGAAGAC+GGG | - | Chr2:57692858-57692877 | MsG0280009764.01.T01:CDS | 45.0% | |
| CAGAATAGCCCTAGCTGAAA+GGG | - | Chr2:57692071-57692090 | MsG0280009764.01.T01:CDS | 45.0% | |
| CATGGACCTTATCCTGATCA+GGG | + | Chr2:57692833-57692852 | None:intergenic | 45.0% | |
| CATTGTAGAGCTGAGGAAGA+CGG | - | Chr2:57692857-57692876 | MsG0280009764.01.T01:CDS | 45.0% | |
| GAGATCACAAGCTAGGTTCT+GGG | - | Chr2:57692281-57692300 | MsG0280009764.01.T01:CDS | 45.0% | |
| GCTTGATACCCTTTCAGCTA+GGG | + | Chr2:57692082-57692101 | None:intergenic | 45.0% | |
| TCAGAATAGCCCTAGCTGAA+AGG | - | Chr2:57692070-57692089 | MsG0280009764.01.T01:CDS | 45.0% | |
| TCATGGACCTTATCCTGATC+AGG | + | Chr2:57692834-57692853 | None:intergenic | 45.0% | |
| TGAAGGTGGAAGGAACCTTT+GGG | - | Chr2:57692554-57692573 | MsG0280009764.01.T01:intron | 45.0% | |
| TGCTTGATACCCTTTCAGCT+AGG | + | Chr2:57692083-57692102 | None:intergenic | 45.0% | |
| TTCAAAGTCACTCCCTGATC+AGG | - | Chr2:57692818-57692837 | MsG0280009764.01.T01:CDS | 45.0% | |
| ! | TTGGGAGACCGGACTTATTT+TGG | - | Chr2:57692648-57692667 | MsG0280009764.01.T01:intron | 45.0% |
| GATTCCTGGGCAAGTCCATT+TGG | - | Chr2:57692039-57692058 | MsG0280009764.01.T01:CDS | 50.0% | |
| GTCACTCCCTGATCAGGATA+AGG | - | Chr2:57692824-57692843 | MsG0280009764.01.T01:CDS | 50.0% | |
| TGGAGCAAGAATTGGGAGAC+CGG | - | Chr2:57692637-57692656 | MsG0280009764.01.T01:intron | 50.0% | |
| !! | CTTCTCCCTTTTTGGCCCAA+AGG | + | Chr2:57692572-57692591 | None:intergenic | 50.0% |
| !!! | GGAGACCGGACTTATTTTGG+AGG | - | Chr2:57692651-57692670 | MsG0280009764.01.T01:intron | 50.0% |
| ! | CATGCCAAATGGACTTGCCC+AGG | + | Chr2:57692046-57692065 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 57692015 | 57692887 | 57692015 | ID=MsG0280009764.01;Name=MsG0280009764.01 |
| Chr2 | mRNA | 57692015 | 57692887 | 57692015 | ID=MsG0280009764.01.T01;Parent=MsG0280009764.01;Name=MsG0280009764.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0|1|1|1|3|0|152 |
| Chr2 | exon | 57692810 | 57692887 | 57692810 | ID=MsG0280009764.01.T01:exon:6151;Parent=MsG0280009764.01.T01 |
| Chr2 | exon | 57692579 | 57692620 | 57692579 | ID=MsG0280009764.01.T01:exon:6150;Parent=MsG0280009764.01.T01 |
| Chr2 | exon | 57692015 | 57692353 | 57692015 | ID=MsG0280009764.01.T01:exon:6149;Parent=MsG0280009764.01.T01 |
| Chr2 | CDS | 57692810 | 57692887 | 57692810 | ID=MsG0280009764.01.T01:cds;Parent=MsG0280009764.01.T01 |
| Chr2 | CDS | 57692579 | 57692620 | 57692579 | ID=MsG0280009764.01.T01:cds;Parent=MsG0280009764.01.T01 |
| Chr2 | CDS | 57692015 | 57692353 | 57692015 | ID=MsG0280009764.01.T01:cds;Parent=MsG0280009764.01.T01 |
| Gene Sequence |
| Protein sequence |
