Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038925.01.T01 | XP_003623174.1 | 95.089 | 224 | 11 | 0 | 1 | 224 | 1 | 224 | 1.47E-153 | 435 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038925.01.T01 | P32110 | 71.556 | 225 | 63 | 1 | 1 | 224 | 1 | 225 | 9.31E-115 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038925.01.T01 | B7FN12 | 95.089 | 224 | 11 | 0 | 1 | 224 | 1 | 224 | 7.02e-154 | 435 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000089.01 | MsG0780038925.01 | 0.803069 | 4.157281e-49 | 2.069267e-46 |
| MsG0180000645.01 | MsG0780038925.01 | 0.823750 | 1.170689e-53 | 1.017071e-50 |
| MsG0180001453.01 | MsG0780038925.01 | 0.802236 | 6.172879e-49 | 3.008301e-46 |
| MsG0180004110.01 | MsG0780038925.01 | 0.821328 | 4.281675e-53 | 3.472767e-50 |
| MsG0180004752.01 | MsG0780038925.01 | 0.812259 | 4.639226e-51 | 2.935594e-48 |
| MsG0180004770.01 | MsG0780038925.01 | 0.844761 | 6.188450e-59 | 1.009325e-55 |
| MsG0180004867.01 | MsG0780038925.01 | 0.830930 | 2.224773e-55 | 2.378265e-52 |
| MsG0180004947.01 | MsG0780038925.01 | 0.848972 | 4.358602e-60 | 8.138902e-57 |
| MsG0180005331.01 | MsG0780038925.01 | 0.826847 | 2.166691e-54 | 2.055863e-51 |
| MsG0180005813.01 | MsG0780038925.01 | 0.812464 | 4.184192e-51 | 2.662404e-48 |
| MsG0180006047.01 | MsG0780038925.01 | 0.881569 | 2.151952e-70 | 1.267331e-66 |
| MsG0280011053.01 | MsG0780038925.01 | 0.834688 | 2.592985e-56 | 3.099822e-53 |
| MsG0380014561.01 | MsG0780038925.01 | 0.833151 | 6.288650e-56 | 7.180414e-53 |
| MsG0680033971.01 | MsG0780038925.01 | 0.808854 | 2.523349e-50 | 1.458584e-47 |
| MsG0480018998.01 | MsG0780038925.01 | 0.808841 | 2.540624e-50 | 1.467986e-47 |
| MsG0480019295.01 | MsG0780038925.01 | 0.808260 | 3.379890e-50 | 1.923613e-47 |
| MsG0480019880.01 | MsG0780038925.01 | 0.836394 | 9.601544e-57 | 1.208432e-53 |
| MsG0480020444.01 | MsG0780038925.01 | 0.813875 | 2.051191e-51 | 1.355496e-48 |
| MsG0480022152.01 | MsG0780038925.01 | 0.839254 | 1.768682e-57 | 2.428636e-54 |
| MsG0480022860.01 | MsG0780038925.01 | 0.819103 | 1.384683e-52 | 1.055702e-49 |
| MsG0480023088.01 | MsG0780038925.01 | 0.818692 | 1.716543e-52 | 1.293896e-49 |
| MsG0480023318.01 | MsG0780038925.01 | 0.829415 | 5.215334e-55 | 5.334308e-52 |
| MsG0480023947.01 | MsG0780038925.01 | 0.834081 | 3.682451e-56 | 4.323305e-53 |
| MsG0580024407.01 | MsG0780038925.01 | 0.839701 | 1.353604e-57 | 1.884289e-54 |
| MsG0580024575.01 | MsG0780038925.01 | 0.822177 | 2.723340e-53 | 2.262378e-50 |
| MsG0580025338.01 | MsG0780038925.01 | 0.820246 | 7.592191e-53 | 5.975355e-50 |
| MsG0380017101.01 | MsG0780038925.01 | 0.844560 | 7.009048e-59 | 1.135998e-55 |
| MsG0380017158.01 | MsG0780038925.01 | 0.803783 | 2.956917e-49 | 1.499146e-46 |
| MsG0580028355.01 | MsG0780038925.01 | 0.812663 | 3.784736e-51 | 2.420737e-48 |
| MsG0580028416.01 | MsG0780038925.01 | 0.836149 | 1.108271e-56 | 1.384621e-53 |
| MsG0580029906.01 | MsG0780038925.01 | 0.802771 | 4.788775e-49 | 2.365861e-46 |
| MsG0580029930.01 | MsG0780038925.01 | 0.828201 | 1.025673e-54 | 1.012477e-51 |
| MsG0280006974.01 | MsG0780038925.01 | 0.823439 | 1.384204e-53 | 1.191829e-50 |
| MsG0280007253.01 | MsG0780038925.01 | 0.861028 | 1.368165e-63 | 3.816536e-60 |
| MsG0280007272.01 | MsG0780038925.01 | 0.839093 | 1.947100e-57 | 2.660609e-54 |
| MsG0280007369.01 | MsG0780038925.01 | 0.836113 | 1.132104e-56 | 1.412816e-53 |
| MsG0280007391.01 | MsG0780038925.01 | 0.812011 | 5.254820e-51 | 3.302656e-48 |
| MsG0280009717.01 | MsG0780038925.01 | 0.839647 | 1.398014e-57 | 1.943016e-54 |
| MsG0280009764.01 | MsG0780038925.01 | 0.825852 | 3.738973e-54 | 3.448755e-51 |
| MsG0280009858.01 | MsG0780038925.01 | 0.803881 | 2.821124e-49 | 1.433964e-46 |
| MsG0280009859.01 | MsG0780038925.01 | 0.812609 | 3.889977e-51 | 2.484455e-48 |
| MsG0780036514.01 | MsG0780038925.01 | 0.829637 | 4.605092e-55 | 4.740700e-52 |
| MsG0780036854.01 | MsG0780038925.01 | 0.802665 | 5.037173e-49 | 2.481686e-46 |
| MsG0780038123.01 | MsG0780038925.01 | 0.823780 | 1.152094e-53 | 1.001739e-50 |
| MsG0780038135.01 | MsG0780038925.01 | 0.830996 | 2.143671e-55 | 2.295972e-52 |
| MsG0780038515.01 | MsG0780038925.01 | 0.805344 | 1.396743e-49 | 7.371631e-47 |
| MsG0780038921.01 | MsG0780038925.01 | 0.852348 | 4.897719e-61 | 1.020446e-57 |
| MsG0780038923.01 | MsG0780038925.01 | 0.808527 | 2.964108e-50 | 1.698798e-47 |
| MsG0780038925.01 | MsG0780039472.01 | 0.837925 | 3.897283e-57 | 5.138984e-54 |
| MsG0780038925.01 | MsG0780039877.01 | 0.832651 | 8.368415e-56 | 9.413597e-53 |
| MsG0780038925.01 | MsG0780040143.01 | 0.826654 | 2.409165e-54 | 2.273283e-51 |
| MsG0780038925.01 | MsG0780040442.01 | 0.830559 | 2.743618e-55 | 2.900730e-52 |
| MsG0780038925.01 | MsG0880041985.01 | 0.813912 | 2.012432e-51 | 1.331176e-48 |
| MsG0780038925.01 | MsG0880042843.01 | 0.841735 | 3.967695e-58 | 5.883638e-55 |
| MsG0780038925.01 | MsG0880042967.01 | 0.806883 | 6.624058e-50 | 3.636724e-47 |
| MsG0780038925.01 | MsG0880043094.01 | 0.876867 | 9.923509e-69 | 4.888144e-65 |
| MsG0780038925.01 | MsG0880043285.01 | 0.815993 | 6.951825e-52 | 4.866454e-49 |
| MsG0780038925.01 | MsG0880043442.01 | 0.800166 | 1.637066e-48 | 7.569969e-46 |
| MsG0780038925.01 | MsG0880043745.01 | 0.828671 | 7.898118e-55 | 7.903577e-52 |
| MsG0780038925.01 | MsG0880045106.01 | 0.804405 | 2.195083e-49 | 1.130776e-46 |
| MsG0780038925.01 | MsG0880045441.01 | 0.828850 | 7.148285e-55 | 7.190003e-52 |
| MsG0780038925.01 | MsG0880046226.01 | 0.816276 | 6.009799e-52 | 4.239838e-49 |
| MsG0780038925.01 | MsG0880046329.01 | 0.805637 | 1.212789e-49 | 6.449194e-47 |
| MsG0780038925.01 | MsG0880046467.01 | 0.800576 | 1.350585e-48 | 6.310844e-46 |
| MsG0780038925.01 | MsG0880046586.01 | 0.820915 | 5.329000e-53 | 4.272992e-50 |
| MsG0780038925.01 | MsG0880046642.01 | 0.821250 | 4.461429e-53 | 3.610566e-50 |
| MsG0780038925.01 | MsG0880046753.01 | 0.806397 | 8.392386e-50 | 4.550216e-47 |
| MsG0780038925.01 | MsG0880047375.01 | 0.806822 | 6.826052e-50 | 3.741678e-47 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038925.01.T01 | MTR_7g065290 | 95.089 | 224 | 11 | 0 | 1 | 224 | 1 | 224 | 1.78e-157 | 435 |
| MsG0780038925.01.T01 | MTR_7g065265 | 90.179 | 224 | 22 | 0 | 1 | 224 | 1 | 224 | 1.32e-147 | 410 |
| MsG0780038925.01.T01 | MTR_7g065270 | 86.161 | 224 | 31 | 0 | 1 | 224 | 1 | 224 | 1.34e-142 | 397 |
| MsG0780038925.01.T01 | MTR_7g065600 | 79.911 | 224 | 45 | 0 | 1 | 224 | 1 | 224 | 1.08e-133 | 375 |
| MsG0780038925.01.T01 | MTR_7g065590 | 79.464 | 224 | 46 | 0 | 1 | 224 | 1 | 224 | 1.46e-130 | 367 |
| MsG0780038925.01.T01 | MTR_7g065230 | 80.804 | 224 | 38 | 1 | 1 | 224 | 1 | 219 | 2.47e-128 | 361 |
| MsG0780038925.01.T01 | MTR_7g065260 | 76.444 | 225 | 52 | 1 | 1 | 224 | 8 | 232 | 2.20e-114 | 326 |
| MsG0780038925.01.T01 | MTR_7g065720 | 69.778 | 225 | 67 | 1 | 1 | 224 | 1 | 225 | 2.07e-112 | 321 |
| MsG0780038925.01.T01 | MTR_7g065660 | 67.265 | 223 | 73 | 0 | 1 | 223 | 1 | 223 | 4.07e-111 | 318 |
| MsG0780038925.01.T01 | MTR_7g065630 | 68.037 | 219 | 66 | 1 | 1 | 219 | 19 | 233 | 1.80e-106 | 306 |
| MsG0780038925.01.T01 | MTR_7g065750 | 67.580 | 219 | 70 | 1 | 1 | 218 | 1 | 219 | 4.62e-106 | 305 |
| MsG0780038925.01.T01 | MTR_7g065740 | 64.545 | 220 | 77 | 1 | 1 | 219 | 1 | 220 | 1.26e-103 | 299 |
| MsG0780038925.01.T01 | MTR_4g019790 | 63.470 | 219 | 80 | 0 | 1 | 219 | 1 | 219 | 1.60e-103 | 298 |
| MsG0780038925.01.T01 | MTR_7g065640 | 61.883 | 223 | 67 | 1 | 1 | 223 | 1 | 205 | 2.94e-98 | 285 |
| MsG0780038925.01.T01 | MTR_7g065710 | 64.734 | 207 | 69 | 1 | 8 | 214 | 5 | 207 | 1.67e-94 | 276 |
| MsG0780038925.01.T01 | MTR_4g019780 | 60.930 | 215 | 82 | 2 | 2 | 215 | 3 | 216 | 2.57e-94 | 275 |
| MsG0780038925.01.T01 | MTR_7g065680 | 64.384 | 219 | 74 | 1 | 1 | 219 | 1 | 215 | 3.08e-89 | 262 |
| MsG0780038925.01.T01 | MTR_7g065700 | 64.486 | 214 | 72 | 1 | 1 | 214 | 1 | 210 | 3.25e-87 | 257 |
| MsG0780038925.01.T01 | MTR_6g080440 | 48.077 | 208 | 106 | 2 | 7 | 213 | 3 | 209 | 7.50e-65 | 200 |
| MsG0780038925.01.T01 | MTR_1g090150 | 47.664 | 214 | 107 | 3 | 6 | 216 | 2 | 213 | 8.42e-63 | 195 |
| MsG0780038925.01.T01 | MTR_3g099757 | 47.642 | 212 | 109 | 2 | 5 | 215 | 3 | 213 | 4.31e-60 | 188 |
| MsG0780038925.01.T01 | MTR_8g087425 | 43.182 | 220 | 123 | 2 | 4 | 222 | 2 | 220 | 8.17e-60 | 187 |
| MsG0780038925.01.T01 | MTR_8g087410 | 44.240 | 217 | 118 | 3 | 1 | 216 | 1 | 215 | 2.51e-56 | 179 |
| MsG0780038925.01.T01 | MTR_1g115195 | 43.119 | 218 | 121 | 2 | 7 | 221 | 3 | 220 | 7.50e-56 | 177 |
| MsG0780038925.01.T01 | MTR_5g040430 | 42.793 | 222 | 119 | 3 | 1 | 215 | 1 | 221 | 8.54e-55 | 175 |
| MsG0780038925.01.T01 | MTR_1g090070 | 42.986 | 221 | 121 | 3 | 7 | 223 | 9 | 228 | 1.42e-53 | 172 |
| MsG0780038925.01.T01 | MTR_1g090060 | 42.584 | 209 | 116 | 2 | 7 | 212 | 3 | 210 | 1.75e-51 | 166 |
| MsG0780038925.01.T01 | MTR_4g059730 | 42.056 | 214 | 118 | 3 | 6 | 215 | 3 | 214 | 1.36e-50 | 164 |
| MsG0780038925.01.T01 | MTR_1g090090 | 41.429 | 210 | 119 | 2 | 7 | 213 | 3 | 211 | 1.42e-50 | 164 |
| MsG0780038925.01.T01 | MTR_1g090100 | 41.121 | 214 | 122 | 2 | 8 | 218 | 3 | 215 | 2.36e-50 | 163 |
| MsG0780038925.01.T01 | MTR_5g037380 | 42.152 | 223 | 119 | 3 | 1 | 215 | 1 | 221 | 6.54e-50 | 162 |
| MsG0780038925.01.T01 | MTR_8g061950 | 42.466 | 219 | 118 | 3 | 5 | 215 | 3 | 221 | 4.71e-49 | 160 |
| MsG0780038925.01.T01 | MTR_2g070130 | 40.291 | 206 | 118 | 5 | 6 | 209 | 3 | 205 | 1.28e-42 | 144 |
| MsG0780038925.01.T01 | MTR_3g467420 | 41.546 | 207 | 116 | 5 | 16 | 220 | 18 | 221 | 2.70e-42 | 143 |
| MsG0780038925.01.T01 | MTR_2g070150 | 40.196 | 204 | 117 | 5 | 6 | 207 | 3 | 203 | 6.07e-42 | 141 |
| MsG0780038925.01.T01 | MTR_2g070140 | 40.722 | 194 | 110 | 5 | 21 | 212 | 2 | 192 | 4.79e-41 | 139 |
| MsG0780038925.01.T01 | MTR_3g467430 | 38.813 | 219 | 129 | 5 | 4 | 220 | 6 | 221 | 1.54e-40 | 138 |
| MsG0780038925.01.T01 | MTR_2g070200 | 40.686 | 204 | 117 | 4 | 6 | 207 | 3 | 204 | 8.93e-40 | 136 |
| MsG0780038925.01.T01 | MTR_2g070210 | 40.094 | 212 | 118 | 7 | 6 | 212 | 3 | 210 | 4.16e-39 | 134 |
| MsG0780038925.01.T01 | MTR_8g056940 | 38.462 | 208 | 120 | 5 | 16 | 218 | 13 | 217 | 1.12e-38 | 133 |
| MsG0780038925.01.T01 | MTR_2g070180 | 38.776 | 196 | 115 | 5 | 16 | 209 | 13 | 205 | 1.92e-38 | 133 |
| MsG0780038925.01.T01 | MTR_4g124130 | 43.979 | 191 | 97 | 6 | 6 | 191 | 3 | 188 | 2.47e-38 | 132 |
| MsG0780038925.01.T01 | MTR_2g070120 | 36.364 | 220 | 133 | 5 | 6 | 222 | 3 | 218 | 1.16e-37 | 130 |
| MsG0780038925.01.T01 | MTR_5g076900 | 37.264 | 212 | 128 | 4 | 3 | 212 | 2 | 210 | 2.17e-36 | 127 |
| MsG0780038925.01.T01 | MTR_2g070070 | 37.019 | 208 | 126 | 4 | 7 | 212 | 4 | 208 | 1.32e-33 | 120 |
| MsG0780038925.01.T01 | MTR_2g070060 | 35.577 | 208 | 129 | 4 | 7 | 212 | 4 | 208 | 2.68e-33 | 119 |
| MsG0780038925.01.T01 | MTR_0186s0030 | 46.565 | 131 | 66 | 3 | 16 | 144 | 13 | 141 | 1.42e-29 | 107 |
| MsG0780038925.01.T01 | MTR_2g070110 | 38.220 | 191 | 112 | 4 | 16 | 204 | 13 | 199 | 2.10e-28 | 107 |
| MsG0780038925.01.T01 | MTR_2g072120 | 43.077 | 65 | 36 | 1 | 51 | 114 | 2 | 66 | 3.66e-13 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038925.01.T01 | AT3G09270 | 54.091 | 220 | 97 | 4 | 3 | 219 | 2 | 220 | 8.60e-77 | 231 |
| MsG0780038925.01.T01 | AT2G29420 | 47.465 | 217 | 112 | 2 | 3 | 218 | 5 | 220 | 2.17e-69 | 212 |
| MsG0780038925.01.T01 | AT2G29490 | 49.048 | 210 | 102 | 4 | 1 | 207 | 1 | 208 | 4.86e-60 | 188 |
| MsG0780038925.01.T01 | AT2G29480 | 48.804 | 209 | 104 | 3 | 1 | 207 | 1 | 208 | 1.77e-58 | 184 |
| MsG0780038925.01.T01 | AT2G29450 | 48.309 | 207 | 105 | 2 | 3 | 207 | 2 | 208 | 3.93e-58 | 183 |
| MsG0780038925.01.T01 | AT2G29460 | 45.933 | 209 | 110 | 3 | 1 | 207 | 1 | 208 | 2.07e-54 | 174 |
| MsG0780038925.01.T01 | AT2G29440 | 45.933 | 209 | 109 | 4 | 1 | 207 | 1 | 207 | 2.21e-53 | 171 |
| MsG0780038925.01.T01 | AT2G29470 | 44.550 | 211 | 111 | 5 | 1 | 207 | 1 | 209 | 1.61e-51 | 166 |
| MsG0780038925.01.T01 | AT1G10370 | 42.081 | 221 | 119 | 3 | 1 | 214 | 1 | 219 | 1.38e-50 | 164 |
| MsG0780038925.01.T01 | AT1G69930 | 37.054 | 224 | 135 | 2 | 2 | 219 | 7 | 230 | 2.83e-49 | 161 |
| MsG0780038925.01.T01 | AT1G27130 | 39.556 | 225 | 127 | 4 | 1 | 217 | 1 | 224 | 7.30e-48 | 157 |
| MsG0780038925.01.T01 | AT1G59700 | 43.119 | 218 | 116 | 4 | 5 | 214 | 4 | 221 | 5.03e-47 | 155 |
| MsG0780038925.01.T01 | AT1G59670 | 40.741 | 216 | 120 | 3 | 5 | 212 | 4 | 219 | 7.94e-46 | 152 |
| MsG0780038925.01.T01 | AT5G62480 | 41.284 | 218 | 117 | 4 | 8 | 215 | 9 | 225 | 2.94e-45 | 151 |
| MsG0780038925.01.T01 | AT1G10360 | 37.500 | 216 | 128 | 2 | 6 | 214 | 4 | 219 | 3.10e-44 | 148 |
| MsG0780038925.01.T01 | AT1G27140 | 37.391 | 230 | 134 | 4 | 1 | 221 | 1 | 229 | 8.10e-44 | 147 |
| MsG0780038925.01.T01 | AT1G74590 | 38.073 | 218 | 128 | 3 | 1 | 212 | 1 | 217 | 1.14e-43 | 147 |
| MsG0780038925.01.T01 | AT1G78380 | 40.865 | 208 | 118 | 4 | 7 | 212 | 4 | 208 | 2.84e-43 | 145 |
| MsG0780038925.01.T01 | AT1G78340 | 42.326 | 215 | 116 | 6 | 6 | 216 | 3 | 213 | 1.37e-42 | 143 |
| MsG0780038925.01.T01 | AT1G78370 | 40.097 | 207 | 118 | 6 | 16 | 220 | 13 | 215 | 7.00e-42 | 142 |
| MsG0780038925.01.T01 | AT1G17170 | 40.376 | 213 | 121 | 5 | 6 | 216 | 3 | 211 | 2.99e-41 | 140 |
| MsG0780038925.01.T01 | AT1G69920 | 36.404 | 228 | 135 | 4 | 1 | 218 | 26 | 253 | 5.63e-41 | 140 |
| MsG0780038925.01.T01 | AT1G78320 | 39.423 | 208 | 121 | 4 | 5 | 210 | 2 | 206 | 2.10e-40 | 138 |
| MsG0780038925.01.T01 | AT1G53680 | 39.151 | 212 | 124 | 4 | 1 | 209 | 1 | 210 | 2.70e-40 | 138 |
| MsG0780038925.01.T01 | AT1G17180 | 39.234 | 209 | 122 | 5 | 6 | 212 | 3 | 208 | 4.50e-39 | 134 |
| MsG0780038925.01.T01 | AT3G43800 | 38.647 | 207 | 118 | 6 | 4 | 204 | 2 | 205 | 9.29e-37 | 129 |
| MsG0780038925.01.T01 | AT1G78360 | 40.191 | 209 | 119 | 6 | 7 | 212 | 4 | 209 | 9.68e-37 | 129 |
| MsG0780038925.01.T01 | AT1G17190 | 41.573 | 178 | 99 | 5 | 16 | 191 | 14 | 188 | 3.45e-34 | 122 |
| MsG0780038925.01.T01 | AT5G62480 | 32.719 | 217 | 111 | 4 | 8 | 215 | 9 | 199 | 1.73e-27 | 104 |
| MsG0780038925.01.T01 | AT5G62480 | 32.719 | 217 | 110 | 4 | 8 | 215 | 9 | 198 | 3.51e-27 | 103 |
| MsG0780038925.01.T01 | AT1G78320 | 31.884 | 207 | 111 | 4 | 5 | 210 | 2 | 179 | 1.05e-23 | 94.4 |
| MsG0780038925.01.T01 | AT2G02380 | 27.442 | 215 | 137 | 6 | 5 | 207 | 9 | 216 | 1.68e-15 | 73.2 |
| MsG0780038925.01.T01 | AT2G02390 | 28.054 | 221 | 132 | 7 | 3 | 207 | 4 | 213 | 5.39e-13 | 66.2 |
| MsG0780038925.01.T01 | AT2G02390 | 27.632 | 228 | 131 | 8 | 3 | 207 | 4 | 220 | 4.88e-12 | 63.5 |
| MsG0780038925.01.T01 | AT2G02390 | 37.113 | 97 | 57 | 2 | 3 | 96 | 4 | 99 | 4.17e-11 | 60.5 |
Find 45 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGGTTCGTTTC+TGG | 0.108094 | 7:-55414727 | MsG0780038925.01.T01:CDS |
| GCTCGTTATGAAAGTCATTT+TGG | 0.207854 | 7:-55413287 | MsG0780038925.01.T01:CDS |
| AATCACAAGTGACTCTGATA+TGG | 0.278115 | 7:+55414808 | None:intergenic |
| CCAAATGCTTCTTGTATAAC+AGG | 0.284363 | 7:+55413431 | None:intergenic |
| TTGGGTGATTGTTGAATTCT+TGG | 0.291920 | 7:+55413360 | None:intergenic |
| ACAGGAACTTTCTTGTAAAC+AGG | 0.303772 | 7:+55414851 | None:intergenic |
| GAGCTCAAAGACAAATTCTT+TGG | 0.309252 | 7:-55413509 | MsG0780038925.01.T01:CDS |
| TTCTTTGGTGGGGAGGATAT+TGG | 0.313435 | 7:-55413494 | MsG0780038925.01.T01:CDS |
| CTCTACGATGGCATCAAATA+AGG | 0.319615 | 7:-55415011 | None:intergenic |
| TGGCTCCAAATGTAAAGCTT+TGG | 0.348494 | 7:+55413380 | None:intergenic |
| TAAGGATCAGAAGGCAAGAT+TGG | 0.379779 | 7:+55414752 | None:intergenic |
| AATTTCCAAAGCTTTACATT+TGG | 0.388847 | 7:-55413385 | MsG0780038925.01.T01:CDS |
| CCTGTTATACAAGAAGCATT+TGG | 0.389924 | 7:-55413431 | MsG0780038925.01.T01:CDS |
| TTCATAACGAGCTTTGTAGA+AGG | 0.410089 | 7:+55413298 | None:intergenic |
| ATCTCCACCCTTGTTACAAA+TGG | 0.430811 | 7:+55414956 | None:intergenic |
| GCCTCCTAGAGAGACCCTTT+TGG | 0.431280 | 7:-55413321 | MsG0780038925.01.T01:CDS |
| GGAGATTGCTCTAAAATTGA+AGG | 0.444678 | 7:-55414939 | MsG0780038925.01.T01:CDS |
| TACCTTGTCATCTATGAGCT+TGG | 0.479184 | 7:+55414703 | None:intergenic |
| GAGCTTTGTAGAAGGCCAAA+AGG | 0.488923 | 7:+55413306 | None:intergenic |
| ATCACAAGTGACTCTGATAT+GGG | 0.492785 | 7:+55414809 | None:intergenic |
| TTATCATTATGAACAAATAC+AGG | 0.499212 | 7:+55414833 | None:intergenic |
| AATATGAGCAAGAAAAGGTT+GGG | 0.503590 | 7:-55414904 | MsG0780038925.01.T01:CDS |
| CTCAAAGACAAATTCTTTGG+TGG | 0.503966 | 7:-55413506 | MsG0780038925.01.T01:CDS |
| TTGAGTATATTGATGAGACT+TGG | 0.504629 | 7:-55414784 | MsG0780038925.01.T01:CDS |
| TGATCCTTACAAAAGAGCCT+TGG | 0.512709 | 7:-55414738 | MsG0780038925.01.T01:CDS |
| CAGGAACTTTCTTGTAAACA+GGG | 0.515430 | 7:+55414852 | None:intergenic |
| AAATATGAGCAAGAAAAGGT+TGG | 0.516900 | 7:-55414905 | MsG0780038925.01.T01:CDS |
| TCAAAGACAAATTCTTTGGT+GGG | 0.523453 | 7:-55413505 | MsG0780038925.01.T01:CDS |
| AGAACGTGAGAAGAGTATTG+AGG | 0.526929 | 7:-55413564 | MsG0780038925.01.T01:CDS |
| AGCTTTGTAGAAGGCCAAAA+GGG | 0.545982 | 7:+55413307 | None:intergenic |
| TGCAGTGTTTGAGTGGTGTA+CGG | 0.549609 | 7:-55413613 | MsG0780038925.01.T01:intron |
| ATCAAATAAGGAAGAGGTGA+AGG | 0.549693 | 7:-55414999 | MsG0780038925.01.T01:CDS |
| ATACAAATATGAGCAAGAAA+AGG | 0.550926 | 7:-55414909 | MsG0780038925.01.T01:CDS |
| AGACAAATTCTTTGGTGGGG+AGG | 0.562220 | 7:-55413501 | MsG0780038925.01.T01:CDS |
| TGGAAAGTCCATTTGTAACA+AGG | 0.573831 | 7:-55414964 | MsG0780038925.01.T01:CDS |
| CAAAGACAAATTCTTTGGTG+GGG | 0.574827 | 7:-55413504 | MsG0780038925.01.T01:CDS |
| GATGGCATCAAATAAGGAAG+AGG | 0.575114 | 7:-55415005 | MsG0780038925.01.T01:CDS |
| AAGGCCAAAAGGGTCTCTCT+AGG | 0.576747 | 7:+55413317 | None:intergenic |
| CAACAATCACCCAATTGTCA+AGG | 0.594522 | 7:-55413351 | MsG0780038925.01.T01:CDS |
| GGAAAGTCCATTTGTAACAA+GGG | 0.613221 | 7:-55414963 | MsG0780038925.01.T01:CDS |
| GAGATTGCTCTAAAATTGAA+GGG | 0.615792 | 7:-55414938 | MsG0780038925.01.T01:CDS |
| GCCAAAAGGGTCTCTCTAGG+AGG | 0.635297 | 7:+55413320 | None:intergenic |
| GACCAAGCTCATAGATGACA+AGG | 0.637840 | 7:-55414705 | MsG0780038925.01.T01:intron |
| AAGTCCATTTGTAACAAGGG+TGG | 0.642673 | 7:-55414960 | MsG0780038925.01.T01:CDS |
| CTTGGTCCAGAAACGAACCA+AGG | 0.732486 | 7:+55414721 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAGTATATAAGATGT+TGG | + | Chr7:55413906-55413925 | None:intergenic | 15.0% |
| !!! | ATCTAATAATTTTTTATGTC+AGG | + | Chr7:55414526-55414545 | None:intergenic | 15.0% |
| !! | AATATGGTCAAAATATGTTA+CGG | - | Chr7:55413950-55413969 | MsG0780038925.01.T01:intron | 20.0% |
| !! | ATAAAAAGAAGTTTAGAAGA+AGG | + | Chr7:55414551-55414570 | None:intergenic | 20.0% |
| !! | TATTTAATGCTAACTAAAGT+TGG | + | Chr7:55413656-55413675 | None:intergenic | 20.0% |
| !! | TTATCATTATGAACAAATAC+AGG | + | Chr7:55413451-55413470 | None:intergenic | 20.0% |
| !!! | ATTAACTTATGTTACTTGTT+AGG | + | Chr7:55414473-55414492 | None:intergenic | 20.0% |
| !!! | ATTTTTAATGAGAAAAGTTC+AGG | + | Chr7:55414169-55414188 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTAAGTAGCTTAG+CGG | - | Chr7:55413718-55413737 | MsG0780038925.01.T01:intron | 20.0% |
| !!! | GTAAATAAATTTGAGATCTT+AGG | - | Chr7:55413681-55413700 | MsG0780038925.01.T01:intron | 20.0% |
| !!! | TACTTGTAAATTAGTTTATG+TGG | + | Chr7:55414342-55414361 | None:intergenic | 20.0% |
| !!! | TTAACTTATGTTACTTGTTA+GGG | + | Chr7:55414472-55414491 | None:intergenic | 20.0% |
| !!! | TTTTTAATGAGAAAAGTTCA+GGG | + | Chr7:55414168-55414187 | None:intergenic | 20.0% |
| ! | AAAGCTCATACAATTAAATG+TGG | - | Chr7:55413743-55413762 | MsG0780038925.01.T01:intron | 25.0% |
| ! | AATTTCCAAAGCTTTACATT+TGG | - | Chr7:55414896-55414915 | MsG0780038925.01.T01:CDS | 25.0% |
| ! | ATACAAATATGAGCAAGAAA+AGG | - | Chr7:55413372-55413391 | MsG0780038925.01.T01:CDS | 25.0% |
| ! | ATATGGTCAAAATATGTTAC+GGG | - | Chr7:55413951-55413970 | MsG0780038925.01.T01:intron | 25.0% |
| ! | GCTAAGCTACTTAAAAAAAA+TGG | + | Chr7:55413719-55413738 | None:intergenic | 25.0% |
| ! | TACACAAAGAAAATAGAAGA+GGG | + | Chr7:55413611-55413630 | None:intergenic | 25.0% |
| ! | TTACACAAAGAAAATAGAAG+AGG | + | Chr7:55413612-55413631 | None:intergenic | 25.0% |
| ! | TTTATTTAGGAAGTCTTCTA+TGG | + | Chr7:55414589-55414608 | None:intergenic | 25.0% |
| !! | ATATGAGTAGATTTTGCAAA+TGG | + | Chr7:55414387-55414406 | None:intergenic | 25.0% |
| !! | TAAACACCAATTTTACATCT+AGG | - | Chr7:55414064-55414083 | MsG0780038925.01.T01:intron | 25.0% |
| !! | TTTTAATGAGAAAAGTTCAG+GGG | + | Chr7:55414167-55414186 | None:intergenic | 25.0% |
| !!! | CATTTTAGAAAAACATGCAA+GGG | + | Chr7:55413799-55413818 | None:intergenic | 25.0% |
| !!! | TTTATGTGGCTCATTTTTAT+TGG | + | Chr7:55414328-55414347 | None:intergenic | 25.0% |
| AAATATGAGCAAGAAAAGGT+TGG | - | Chr7:55413376-55413395 | MsG0780038925.01.T01:CDS | 30.0% | |
| AATATGAGCAAGAAAAGGTT+GGG | - | Chr7:55413377-55413396 | MsG0780038925.01.T01:CDS | 30.0% | |
| AATCCAAAAAGCTATGAGTA+CGG | + | Chr7:55414830-55414849 | None:intergenic | 30.0% | |
| ACAATTAAATGTGGAGAAGT+GGG | - | Chr7:55413752-55413771 | MsG0780038925.01.T01:intron | 30.0% | |
| ACACAAAGAAAATAGAAGAG+GGG | + | Chr7:55413610-55413629 | None:intergenic | 30.0% | |
| TAAAGTTGGACATTTGAACT+TGG | + | Chr7:55413642-55413661 | None:intergenic | 30.0% | |
| TACAATTAAATGTGGAGAAG+TGG | - | Chr7:55413751-55413770 | MsG0780038925.01.T01:intron | 30.0% | |
| TCAAACACTGCAAAAAGAAA+TGG | + | Chr7:55414660-55414679 | None:intergenic | 30.0% | |
| TCAAAGACAAATTCTTTGGT+GGG | - | Chr7:55414776-55414795 | MsG0780038925.01.T01:CDS | 30.0% | |
| TTGAGTATATTGATGAGACT+TGG | - | Chr7:55413497-55413516 | MsG0780038925.01.T01:CDS | 30.0% | |
| ! | TTATGTTACTTGTTAGGGTA+TGG | + | Chr7:55414467-55414486 | None:intergenic | 30.0% |
| !! | GAGATTGCTCTAAAATTGAA+GGG | - | Chr7:55413343-55413362 | MsG0780038925.01.T01:CDS | 30.0% |
| !! | GCATTTTAGAAAAACATGCA+AGG | + | Chr7:55413800-55413819 | None:intergenic | 30.0% |
| AAGTTATCCACAACTCTTCA+AGG | - | Chr7:55414431-55414450 | MsG0780038925.01.T01:intron | 35.0% | |
| AATCACAAGTGACTCTGATA+TGG | + | Chr7:55413476-55413495 | None:intergenic | 35.0% | |
| ACAGGAACTTTCTTGTAAAC+AGG | + | Chr7:55413433-55413452 | None:intergenic | 35.0% | |
| ACTCGTCCTAGATGTAAAAT+TGG | + | Chr7:55414073-55414092 | None:intergenic | 35.0% | |
| AGTTATCCACAACTCTTCAA+GGG | - | Chr7:55414432-55414451 | MsG0780038925.01.T01:intron | 35.0% | |
| ATCAAATAAGGAAGAGGTGA+AGG | - | Chr7:55413282-55413301 | MsG0780038925.01.T01:CDS | 35.0% | |
| ATCACAAGTGACTCTGATAT+GGG | + | Chr7:55413475-55413494 | None:intergenic | 35.0% | |
| CAAAGACAAATTCTTTGGTG+GGG | - | Chr7:55414777-55414796 | MsG0780038925.01.T01:CDS | 35.0% | |
| CAATTAAATGTGGAGAAGTG+GGG | - | Chr7:55413753-55413772 | MsG0780038925.01.T01:intron | 35.0% | |
| CAGGAACTTTCTTGTAAACA+GGG | + | Chr7:55413432-55413451 | None:intergenic | 35.0% | |
| CATAAAACAATGAGAGAGGA+GGG | - | Chr7:55414117-55414136 | MsG0780038925.01.T01:intron | 35.0% | |
| CCAAATGCTTCTTGTATAAC+AGG | + | Chr7:55414853-55414872 | None:intergenic | 35.0% | |
| CTCAAAGACAAATTCTTTGG+TGG | - | Chr7:55414775-55414794 | MsG0780038925.01.T01:CDS | 35.0% | |
| GAGCTCAAAGACAAATTCTT+TGG | - | Chr7:55414772-55414791 | MsG0780038925.01.T01:CDS | 35.0% | |
| GGAAAGTCCATTTGTAACAA+GGG | - | Chr7:55413318-55413337 | MsG0780038925.01.T01:CDS | 35.0% | |
| TAGGCATAAAACAATGAGAG+AGG | - | Chr7:55414113-55414132 | MsG0780038925.01.T01:intron | 35.0% | |
| TGGAAAGTCCATTTGTAACA+AGG | - | Chr7:55413317-55413336 | MsG0780038925.01.T01:CDS | 35.0% | |
| TTAGAAAAACATGCAAGGGT+CGG | + | Chr7:55413795-55413814 | None:intergenic | 35.0% | |
| TTATGCCTAGAGAGAATATG+TGG | + | Chr7:55414102-55414121 | None:intergenic | 35.0% | |
| TTGGGTGATTGTTGAATTCT+TGG | + | Chr7:55414924-55414943 | None:intergenic | 35.0% | |
| ! | GCAGTTTTTCCTTGACAATT+GGG | + | Chr7:55414942-55414961 | None:intergenic | 35.0% |
| ! | GCTCGTTATGAAAGTCATTT+TGG | - | Chr7:55414994-55415013 | MsG0780038925.01.T01:CDS | 35.0% |
| ! | TTCATAACGAGCTTTGTAGA+AGG | + | Chr7:55414986-55415005 | None:intergenic | 35.0% |
| ! | TTCTTTTTGCAGTGTTTGAG+TGG | - | Chr7:55414661-55414680 | MsG0780038925.01.T01:intron | 35.0% |
| !! | CCTGTTATACAAGAAGCATT+TGG | - | Chr7:55414850-55414869 | MsG0780038925.01.T01:CDS | 35.0% |
| !! | GGAGATTGCTCTAAAATTGA+AGG | - | Chr7:55413342-55413361 | MsG0780038925.01.T01:CDS | 35.0% |
| AAGTCCATTTGTAACAAGGG+TGG | - | Chr7:55413321-55413340 | MsG0780038925.01.T01:CDS | 40.0% | |
| ATCTCCACCCTTGTTACAAA+TGG | + | Chr7:55413328-55413347 | None:intergenic | 40.0% | |
| CAACAATCACCCAATTGTCA+AGG | - | Chr7:55414930-55414949 | MsG0780038925.01.T01:CDS | 40.0% | |
| GAGATCTTAGGTGTGTCTTT+GGG | - | Chr7:55413693-55413712 | MsG0780038925.01.T01:intron | 40.0% | |
| GCATAAAACAATGAGAGAGG+AGG | - | Chr7:55414116-55414135 | MsG0780038925.01.T01:intron | 40.0% | |
| TAAGGATCAGAAGGCAAGAT+TGG | + | Chr7:55413532-55413551 | None:intergenic | 40.0% | |
| TACCTTGTCATCTATGAGCT+TGG | + | Chr7:55413581-55413600 | None:intergenic | 40.0% | |
| TAGAAAAACATGCAAGGGTC+GGG | + | Chr7:55413794-55413813 | None:intergenic | 40.0% | |
| TCACACCACATATTCTCTCT+AGG | - | Chr7:55414094-55414113 | MsG0780038925.01.T01:intron | 40.0% | |
| TGAGATCTTAGGTGTGTCTT+TGG | - | Chr7:55413692-55413711 | MsG0780038925.01.T01:intron | 40.0% | |
| TGATCCTTACAAAAGAGCCT+TGG | - | Chr7:55413543-55413562 | MsG0780038925.01.T01:CDS | 40.0% | |
| TGGCTCCAAATGTAAAGCTT+TGG | + | Chr7:55414904-55414923 | None:intergenic | 40.0% | |
| ! | AAGGAAGAGGTGAAGGTTTT+TGG | - | Chr7:55413289-55413308 | MsG0780038925.01.T01:CDS | 40.0% |
| ! | AGCTTTGTAGAAGGCCAAAA+GGG | + | Chr7:55414977-55414996 | None:intergenic | 40.0% |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | + | Chr7:55413541-55413560 | None:intergenic | 40.0% |
| ! | GGCAGTTTTTCCTTGACAAT+TGG | + | Chr7:55414943-55414962 | None:intergenic | 40.0% |
| !! | AGAACGTGAGAAGAGTATTG+AGG | - | Chr7:55414717-55414736 | MsG0780038925.01.T01:CDS | 40.0% |
| !! | AGAGGTGAAGGTTTTTGGAT+TGG | - | Chr7:55413294-55413313 | MsG0780038925.01.T01:CDS | 40.0% |
| ACTCTTCTTCGAGAAGAGAG+TGG | + | Chr7:55414200-55414219 | None:intergenic | 45.0% | |
| AGAAAAACATGCAAGGGTCG+GGG | + | Chr7:55413793-55413812 | None:intergenic | 45.0% | |
| AGACAAATTCTTTGGTGGGG+AGG | - | Chr7:55414780-55414799 | MsG0780038925.01.T01:CDS | 45.0% | |
| ATGTCACCCTTGAAGAGTTG+TGG | + | Chr7:55414441-55414460 | None:intergenic | 45.0% | |
| CAACTCTTCAAGGGTGACAT+AGG | - | Chr7:55414441-55414460 | MsG0780038925.01.T01:intron | 45.0% | |
| GACCAAGCTCATAGATGACA+AGG | - | Chr7:55413576-55413595 | MsG0780038925.01.T01:CDS | 45.0% | |
| TGCAGTGTTTGAGTGGTGTA+CGG | - | Chr7:55414668-55414687 | MsG0780038925.01.T01:intron | 45.0% | |
| TTCTTTGGTGGGGAGGATAT+TGG | - | Chr7:55414787-55414806 | MsG0780038925.01.T01:CDS | 45.0% | |
| ! | AAAGAGCCTTGGTTCGTTTC+TGG | - | Chr7:55413554-55413573 | MsG0780038925.01.T01:CDS | 45.0% |
| ! | CGAACCAAGGCTCTTTTGTA+AGG | + | Chr7:55413550-55413569 | None:intergenic | 45.0% |
| ! | CTGCCGTACTCATAGCTTTT+TGG | - | Chr7:55414824-55414843 | MsG0780038925.01.T01:CDS | 45.0% |
| ! | GAGCTTTGTAGAAGGCCAAA+AGG | + | Chr7:55414978-55414997 | None:intergenic | 45.0% |
| !! | GGTGAAGGTTTTTGGATTGG+TGG | - | Chr7:55413297-55413316 | MsG0780038925.01.T01:CDS | 45.0% |
| !! | TACATTAATAAAAAAAAATA+TGG | - | Chr7:55413934-55413953 | MsG0780038925.01.T01:intron | 5.0% |
| !!! | TAAATAATTTGTTTTTATTT+AGG | + | Chr7:55414602-55414621 | None:intergenic | 5.0% |
| AAGGCCAAAAGGGTCTCTCT+AGG | + | Chr7:55414967-55414986 | None:intergenic | 50.0% | |
| AGAGAGGAGGGATGTGAGTT+GGG | - | Chr7:55414129-55414148 | MsG0780038925.01.T01:intron | 50.0% | |
| CTTGGTCCAGAAACGAACCA+AGG | + | Chr7:55413563-55413582 | None:intergenic | 50.0% | |
| GAGAGAGGAGGGATGTGAGT+TGG | - | Chr7:55414128-55414147 | MsG0780038925.01.T01:intron | 55.0% | |
| GCCAAAAGGGTCTCTCTAGG+AGG | + | Chr7:55414964-55414983 | None:intergenic | 55.0% | |
| ! | AGGGATGTGAGTTGGGTGGA+TGG | - | Chr7:55414136-55414155 | MsG0780038925.01.T01:intron | 55.0% |
| ! | GCCTCCTAGAGAGACCCTTT+TGG | - | Chr7:55414960-55414979 | MsG0780038925.01.T01:CDS | 55.0% |
| ! | GGATGTGAGTTGGGTGGATG+GGG | - | Chr7:55414138-55414157 | MsG0780038925.01.T01:intron | 55.0% |
| ! | GGGATGTGAGTTGGGTGGAT+GGG | - | Chr7:55414137-55414156 | MsG0780038925.01.T01:intron | 55.0% |
| ! | GAGGAGGGATGTGAGTTGGG+TGG | - | Chr7:55414132-55414151 | MsG0780038925.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 55413277 | 55415026 | 55413277 | ID=MsG0780038925.01;Name=MsG0780038925.01 |
| Chr7 | mRNA | 55413277 | 55415026 | 55413277 | ID=MsG0780038925.01.T01;Parent=MsG0780038925.01;Name=MsG0780038925.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|224 |
| Chr7 | exon | 55414706 | 55415026 | 55414706 | ID=MsG0780038925.01.T01:exon:15452;Parent=MsG0780038925.01.T01 |
| Chr7 | exon | 55413277 | 55413630 | 55413277 | ID=MsG0780038925.01.T01:exon:15451;Parent=MsG0780038925.01.T01 |
| Chr7 | CDS | 55414706 | 55415026 | 55414706 | ID=MsG0780038925.01.T01:cds;Parent=MsG0780038925.01.T01 |
| Chr7 | CDS | 55413277 | 55413630 | 55413277 | ID=MsG0780038925.01.T01:cds;Parent=MsG0780038925.01.T01 |
| Gene Sequence |
| Protein sequence |
