AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015373.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015373.01.T01 MTR_3g069190 96.667 330 11 0 1 330 1 330 0.0 652
MsG0380015373.01.T01 MTR_3g069190 87.879 330 9 1 1 330 1 299 0.0 575
MsG0380015373.01.T01 MTR_3g069190 96.691 272 9 0 1 272 1 272 0.0 539
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015373.01.T01 AT5G64250 80.122 327 65 0 4 330 2 328 0.0 550
MsG0380015373.01.T01 AT5G64250 78.746 287 61 0 44 330 2 288 3.63e-170 474

Find 141 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAATACATCTATAAATAAT+TGG 0.186681 3:-69197148 None:intergenic
ACTGAGTACACGGATGTATT+TGG 0.206653 3:+69196307 MsG0380015373.01.T01:CDS
CAAGTAGAATGTCAAATTTC+AGG 0.216135 3:+69196736 MsG0380015373.01.T01:exon
CGCAGTATTGCAAACTTATT+GGG 0.219941 3:+69193880 MsG0380015373.01.T01:CDS
TCGCAGTATTGCAAACTTAT+TGG 0.225729 3:+69193879 MsG0380015373.01.T01:CDS
CATGGGTTGGAGAGGAATAT+TGG 0.242800 3:+69193333 MsG0380015373.01.T01:exon
TGGAGAATGTCGACTTTCTT+TGG 0.248644 3:+69196964 MsG0380015373.01.T01:three_prime_UTR
GTCTTCTCAGGGCCCCTGAC+TGG 0.270205 3:+69193446 MsG0380015373.01.T01:CDS
GTTGCTGCTGTTGCCAATGC+TGG 0.278425 3:+69193415 MsG0380015373.01.T01:CDS
GTTGCCAAGGCTCATGCAGC+TGG 0.294070 3:+69193923 MsG0380015373.01.T01:CDS
CTGGCGCTCTTGGTCTTCTC+AGG 0.297133 3:+69193434 MsG0380015373.01.T01:CDS
AATTGGGAGCTAACTTCTAA+TGG 0.300978 3:-69197131 None:intergenic
GTTGCCAATGCTGGCGCTCT+TGG 0.309205 3:+69193424 MsG0380015373.01.T01:CDS
TGTCAACAGTAATAATAGTT+TGG 0.312289 3:+69197009 MsG0380015373.01.T01:three_prime_UTR
CCGAGGGTGGTCGATCTTGT+TGG 0.317317 3:+69195543 MsG0380015373.01.T01:CDS
GCAGGATAGTTTAATTTCAT+TGG 0.321318 3:+69195518 MsG0380015373.01.T01:intron
TCTCCTGTAGTTGTCATGTT+TGG 0.321848 3:-69196593 None:intergenic
CGAGGGTGGTCGATCTTGTT+GGG 0.326794 3:+69195544 MsG0380015373.01.T01:CDS
CTCCTGTAGTTGTCATGTTT+GGG 0.329921 3:-69196592 None:intergenic
GATACACATACATAAATATT+AGG 0.347837 3:-69196820 None:intergenic
CCCAAAGGGTTTATCAGTTA+AGG 0.349440 3:-69193795 None:intergenic
TGAAGCAAAGGTACCCAGTC+AGG 0.362588 3:-69193460 None:intergenic
GAAGCAGGTGGTCATGTTAT+TGG 0.369464 3:+69194721 MsG0380015373.01.T01:CDS
ATTGGGAGCTAACTTCTAAT+GGG 0.371095 3:-69197130 None:intergenic
CTGAGTACACGGATGTATTT+GGG 0.389520 3:+69196308 MsG0380015373.01.T01:CDS
ATGGGTTGGAGAGGAATATT+GGG 0.394644 3:+69193334 MsG0380015373.01.T01:CDS
ACCTTAACTGATAAACCCTT+TGG 0.409677 3:+69193794 MsG0380015373.01.T01:CDS
TCCTCATGAGGAGAACTTGA+AGG 0.419894 3:+69193838 MsG0380015373.01.T01:CDS
ATTCCTCCAGCTGCAATAAC+AGG 0.421071 3:-69195579 None:intergenic
GTCAACAGTAATAATAGTTT+GGG 0.421537 3:+69197010 MsG0380015373.01.T01:three_prime_UTR
CCTTAACTGATAAACCCTTT+GGG 0.435859 3:+69193795 MsG0380015373.01.T01:CDS
TTGCCAAGGCTCATGCAGCT+GGG 0.439308 3:+69193924 MsG0380015373.01.T01:CDS
ATGAGCCTTGGCAACCAATT+CGG 0.440632 3:-69193915 None:intergenic
AGGGTAGCAAATGGGGTGGC+AGG 0.446810 3:+69197082 MsG0380015373.01.T01:three_prime_UTR
TTGGCTTCACTTTCATGAGC+TGG 0.447083 3:-69196400 None:intergenic
ACTGATAAACCCTTTGGGAT+TGG 0.450635 3:+69193800 MsG0380015373.01.T01:CDS
AGGACACGATGTGGTGCATC+GGG 0.451394 3:-69196343 None:intergenic
ATTGGCCATTCAACGATTCA+TGG 0.456668 3:+69196433 MsG0380015373.01.T01:CDS
CAATACATCTATAAATAATT+GGG 0.456671 3:-69197147 None:intergenic
ATTACTTGAGGGAGCTCATA+AGG 0.460879 3:+69193762 MsG0380015373.01.T01:CDS
GTGGGTAGCTGACCTCAGTA+TGG 0.461928 3:+69196944 MsG0380015373.01.T01:three_prime_UTR
TCTTCTCAGGGCCCCTGACT+GGG 0.462442 3:+69193447 MsG0380015373.01.T01:CDS
AACCCCAGCTGCATGAGCCT+TGG 0.464043 3:-69193927 None:intergenic
TCAGGTGAATCAAGAACAAA+TGG 0.467372 3:+69196754 MsG0380015373.01.T01:three_prime_UTR
CAGGACACGATGTGGTGCAT+CGG 0.467517 3:-69196344 None:intergenic
ATGGTTTGCACCACTGTGTT+CGG 0.472913 3:+69196881 MsG0380015373.01.T01:three_prime_UTR
CCACGCCATGAATCGTTGAA+TGG 0.474277 3:-69196438 None:intergenic
AGTTGAGGACCAGAGATATC+AGG 0.475572 3:-69193391 None:intergenic
CTTTCAAGAAAATCGGATGT+AGG 0.477751 3:-69193251 None:intergenic
AGGTGGTCATGTTATTGGTC+AGG 0.479075 3:+69194726 MsG0380015373.01.T01:CDS
CCTTGATGAGACCAACACTT+TGG 0.481217 3:-69196643 None:intergenic
TGGGGTTAAAATTGTTCCAC+AGG 0.481779 3:+69193943 MsG0380015373.01.T01:CDS
GAAGCCAACCAACCTGTCAT+TGG 0.481968 3:+69196415 MsG0380015373.01.T01:CDS
TTCACTTTCATGAGCTGGAA+GGG 0.485664 3:-69196395 None:intergenic
CCACTAGGTCCTGATATCTC+TGG 0.493195 3:+69193382 MsG0380015373.01.T01:CDS
GGTGCTCAAGGCGTCTGTCT+AGG 0.494515 3:+69195639 MsG0380015373.01.T01:CDS
GATATACCTGTTATTGCAGC+TGG 0.499725 3:+69195573 MsG0380015373.01.T01:CDS
TTTAATTTCATTGGTGCCGA+GGG 0.501035 3:+69195527 MsG0380015373.01.T01:CDS
CTTCACTTTCATGAGCTGGA+AGG 0.504016 3:-69196396 None:intergenic
GGGTGATTGTACAACCGAAT+TGG 0.505041 3:+69193901 MsG0380015373.01.T01:CDS
TTAGCCGGAGGGTAGCAAAT+GGG 0.506166 3:+69197074 MsG0380015373.01.T01:three_prime_UTR
TGTCATGTTTGGGACTGTAC+CGG 0.509661 3:-69196582 None:intergenic
ATGAGCTCCCTCAAGTAATC+CGG 0.513123 3:-69193758 None:intergenic
ACTTAGTACTAAAGTTTAGC+CGG 0.515324 3:+69197059 MsG0380015373.01.T01:three_prime_UTR
GCTCTAGCACTTGGTGCTCA+AGG 0.515378 3:+69195627 MsG0380015373.01.T01:CDS
TGCCAAGGCTCATGCAGCTG+GGG 0.515416 3:+69193925 MsG0380015373.01.T01:CDS
GACTTTGTTACGCGCTGCAG+TGG 0.516644 3:+69196925 MsG0380015373.01.T01:three_prime_UTR
TTTAGCCGGAGGGTAGCAAA+TGG 0.516726 3:+69197073 MsG0380015373.01.T01:three_prime_UTR
GTAGCAAATGGGGTGGCAGG+TGG 0.516762 3:+69197085 MsG0380015373.01.T01:three_prime_UTR
ATTCTGCAAGGTCGTGAAGC+AGG 0.519603 3:+69194706 MsG0380015373.01.T01:CDS
AGAGAGGCTTCAACATGGGT+TGG 0.521515 3:+69193320 MsG0380015373.01.T01:exon
GCAATTGATGCAGGTGCCGA+TGG 0.521675 3:+69194679 MsG0380015373.01.T01:CDS
CCAACAAGATCGACCACCCT+CGG 0.528675 3:-69195543 None:intergenic
AAAATCGGATGTAGGAAGAA+TGG 0.529226 3:-69193243 None:intergenic
TATGTTGCTGCTCTAGCACT+TGG 0.531534 3:+69195618 MsG0380015373.01.T01:CDS
CTTTGAAGAAAGGTGTCTGC+AGG 0.531599 3:-69196363 None:intergenic
GCAGCTGGAGGAATTGTAGA+TGG 0.532469 3:+69195588 MsG0380015373.01.T01:CDS
TATGAATATGTAGGAATCAC+CGG 0.533749 3:+69193739 MsG0380015373.01.T01:intron
TGAATCAAGAACAAATGGAA+TGG 0.538303 3:+69196759 MsG0380015373.01.T01:three_prime_UTR
TTGGGACTGTACCGGCAAAA+CGG 0.539874 3:-69196574 None:intergenic
GTCCCAAACATGACAACTAC+AGG 0.543404 3:+69196590 MsG0380015373.01.T01:CDS
TGGCGCTCTTGGTCTTCTCA+GGG 0.546270 3:+69193435 MsG0380015373.01.T01:CDS
AAGACCAAGAGCGCCAGCAT+TGG 0.548568 3:-69193428 None:intergenic
GATCTCCAGTCTTTGAAGAA+AGG 0.549706 3:-69196373 None:intergenic
GTGATTAAGAGACTAGTTGA+AGG 0.549736 3:+69196686 MsG0380015373.01.T01:CDS
AGACACCTTTCTTCAAAGAC+TGG 0.552411 3:+69196368 MsG0380015373.01.T01:CDS
TACAACCGAATTGGTTGCCA+AGG 0.556327 3:+69193910 MsG0380015373.01.T01:CDS
GGCTTCAACATGGGTTGGAG+AGG 0.557549 3:+69193325 MsG0380015373.01.T01:exon
AGAGAGAGAGGCTTCAACAT+GGG 0.558920 3:+69193316 MsG0380015373.01.T01:exon
GGAATCACCGGATTACTTGA+GGG 0.562118 3:+69193751 MsG0380015373.01.T01:intron
GAGAGAGAGAGGCTTCAACA+TGG 0.566425 3:+69193315 MsG0380015373.01.T01:exon
AGAACTAAACCAATCCCAAA+GGG 0.572201 3:-69193809 None:intergenic
AATTTCATTGGTGCCGAGGG+TGG 0.574100 3:+69195530 MsG0380015373.01.T01:CDS
ATCGTTGAATGGCCAATGAC+AGG 0.575943 3:-69196427 None:intergenic
TTGCAGGTTTCTTGCAACTG+AGG 0.576902 3:+69196234 MsG0380015373.01.T01:intron
CCAAAGTGTTGGTCTCATCA+AGG 0.577958 3:+69196643 MsG0380015373.01.T01:CDS
ATGGCCAATGACAGGTTGGT+TGG 0.579001 3:-69196419 None:intergenic
GAGAGCATGTGTATGTATGC+TGG 0.579458 3:+69196620 MsG0380015373.01.T01:CDS
CCACCCCATTTGCTACCCTC+CGG 0.582154 3:-69197078 None:intergenic
TAGCCGGAGGGTAGCAAATG+GGG 0.583146 3:+69197075 MsG0380015373.01.T01:three_prime_UTR
CGGATGTATTTGGGAGAGCA+AGG 0.583192 3:+69196317 MsG0380015373.01.T01:CDS
CCATTCAACGATTCATGGCG+TGG 0.585787 3:+69196438 MsG0380015373.01.T01:CDS
AGGAATCACCGGATTACTTG+AGG 0.586705 3:+69193750 MsG0380015373.01.T01:intron
ACCTTCAAGTTCTCCTCATG+AGG 0.587452 3:-69193839 None:intergenic
GGAGGAATTGTAGATGGTCG+AGG 0.589092 3:+69195594 MsG0380015373.01.T01:CDS
GTTTAATTTCATTGGTGCCG+AGG 0.590869 3:+69195526 MsG0380015373.01.T01:CDS
GAAGCAAAGGTACCCAGTCA+GGG 0.592954 3:-69193459 None:intergenic
GCAACAGCAGCAACAAGTTG+AGG 0.595299 3:-69193406 None:intergenic
AGCAAGCACATAACCTCCGT+TGG 0.601054 3:-69196850 None:intergenic
AAGGCGTCTGTCTAGGCACT+AGG 0.601536 3:+69195646 MsG0380015373.01.T01:CDS
GGCATAATTCAGGCACCACT+AGG 0.602564 3:+69193367 MsG0380015373.01.T01:CDS
ATGTATGCTGGCCAAAGTGT+TGG 0.607730 3:+69196632 MsG0380015373.01.T01:CDS
TGATTAAGAGACTAGTTGAA+GGG 0.611391 3:+69196687 MsG0380015373.01.T01:CDS
TAGAACTAAACCAATCCCAA+AGG 0.616278 3:-69193810 None:intergenic
GGGAGCTCATAAGGAAAACA+AGG 0.623691 3:+69193771 MsG0380015373.01.T01:CDS
GCCGATGGAATCATTCTGCA+AGG 0.624929 3:+69194694 MsG0380015373.01.T01:CDS
GAGGGTGGTCGATCTTGTTG+GGG 0.625015 3:+69195545 MsG0380015373.01.T01:CDS
AGTACTAAAGTTTAGCCGGA+GGG 0.629093 3:+69197063 MsG0380015373.01.T01:three_prime_UTR
ATGTGCTTGCTAGAACAACA+TGG 0.636884 3:+69196862 MsG0380015373.01.T01:three_prime_UTR
GATTAAGAGACTAGTTGAAG+GGG 0.639273 3:+69196688 MsG0380015373.01.T01:CDS
TAGTACTAAAGTTTAGCCGG+AGG 0.647130 3:+69197062 MsG0380015373.01.T01:three_prime_UTR
ACTTTGTTACGCGCTGCAGT+GGG 0.648409 3:+69196926 MsG0380015373.01.T01:three_prime_UTR
CTGCAATAACAGGTATATCA+CGG 0.651296 3:-69195569 None:intergenic
TTGAATGGCCAATGACAGGT+TGG 0.651828 3:-69196423 None:intergenic
ACCTTGCAGAATGATTCCAT+CGG 0.655332 3:-69194695 None:intergenic
ATACCTGTTATTGCAGCTGG+AGG 0.657038 3:+69195576 MsG0380015373.01.T01:CDS
GCAGTATTGCAAACTTATTG+GGG 0.657214 3:+69193881 MsG0380015373.01.T01:CDS
AAGCAAAGGTACCCAGTCAG+GGG 0.664519 3:-69193458 None:intergenic
CTGCAAGGTCGTGAAGCAGG+TGG 0.668201 3:+69194709 MsG0380015373.01.T01:CDS
ACTCGATGAAACTGAGTACA+CGG 0.668283 3:+69196297 MsG0380015373.01.T01:CDS
TTGGGAGCTAACTTCTAATG+GGG 0.682569 3:-69197129 None:intergenic
CCGGAGGGTAGCAAATGGGG+TGG 0.692599 3:+69197078 MsG0380015373.01.T01:three_prime_UTR
GTGTTCGGTAGATATTGACA+AGG 0.692935 3:+69196896 MsG0380015373.01.T01:three_prime_UTR
GGTGTCTGCAGGACACGATG+TGG 0.696357 3:-69196352 None:intergenic
ATGTATTTGGGAGAGCAAGG+TGG 0.699779 3:+69196320 MsG0380015373.01.T01:CDS
CCAGAGATATCAGGACCTAG+TGG 0.707710 3:-69193382 None:intergenic
CGGATGTAGGAAGAATGGTG+AGG 0.712883 3:-69193238 None:intergenic
TGTATCTGAGATGCCAACGG+AGG 0.714137 3:+69196837 MsG0380015373.01.T01:three_prime_UTR
AGTCGACATTCTCCATACTG+AGG 0.720714 3:-69196956 None:intergenic
ATGTGTATCTGAGATGCCAA+CGG 0.723323 3:+69196834 MsG0380015373.01.T01:three_prime_UTR
TCAATATCTACCGAACACAG+TGG 0.743079 3:-69196891 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTATATAATCAAATAAAA+AGG - Chr3:69196526-69196545 None:intergenic 10.0%
!! GTTAGATAATAAATTAATAA+GGG - Chr3:69193492-69193511 None:intergenic 10.0%
!! TGTAAAATAAAAATTAAAAC+AGG - Chr3:69194433-69194452 None:intergenic 10.0%
!! TGTTAGATAATAAATTAATA+AGG - Chr3:69193493-69193512 None:intergenic 10.0%
!! TTAGATAATAAATTAATAAG+GGG - Chr3:69193491-69193510 None:intergenic 10.0%
!! ACAATACATCTATAAATAAT+TGG - Chr3:69197151-69197170 None:intergenic 15.0%
!! CAATACATCTATAAATAATT+GGG - Chr3:69197150-69197169 None:intergenic 15.0%
!! TAGATAATAAATTAATAAGG+GGG - Chr3:69193490-69193509 None:intergenic 15.0%
!! TTTATAATTTATTCCAAAAC+AGG - Chr3:69194458-69194477 None:intergenic 15.0%
!!! AAATTTTTCTTTTTGATTCA+CGG - Chr3:69195204-69195223 None:intergenic 15.0%
!!! ATATTTTAAAATGAACAGAA+CGG - Chr3:69196800-69196819 None:intergenic 15.0%
!!! ATATTTTGCATATTTAATCT+GGG + Chr3:69195855-69195874 MsG0380015373.01.T01:intron 15.0%
!!! TATATTTGTGTTTCTATTAT+AGG + Chr3:69194630-69194649 MsG0380015373.01.T01:intron 15.0%
!! AAGGAAACTAAAATTAGAAA+TGG - Chr3:69193985-69194004 None:intergenic 20.0%
!! AATTTATACCTAGAAACTTT+GGG + Chr3:69195125-69195144 MsG0380015373.01.T01:intron 20.0%
!! ACTTATACATGTGATATTTA+AGG + Chr3:69195688-69195707 MsG0380015373.01.T01:intron 20.0%
!! AGGAAACTAAAATTAGAAAT+GGG - Chr3:69193984-69194003 None:intergenic 20.0%
!! ATAAGGAATACAATTGTTTA+AGG - Chr3:69195816-69195835 None:intergenic 20.0%
!! GATACACATACATAAATATT+AGG - Chr3:69196823-69196842 None:intergenic 20.0%
!! TCAATTGTATATGAATCAAA+AGG - Chr3:69194004-69194023 None:intergenic 20.0%
!! TGTTTCATATTATAACACTT+AGG + Chr3:69194994-69195013 MsG0380015373.01.T01:intron 20.0%
!!! AACAGATTGTTTTTTAACTA+TGG - Chr3:69195291-69195310 None:intergenic 20.0%
!!! AAGTTATTTTCATTCTGTTT+GGG + Chr3:69194592-69194611 MsG0380015373.01.T01:intron 20.0%
!!! ACTAACTTTCTTTTGTATAT+AGG - Chr3:69196274-69196293 None:intergenic 20.0%
!!! ATTGTTTTTTAACTATGGAT+GGG - Chr3:69195286-69195305 None:intergenic 20.0%
!!! CATATTTTGCATATTTAATC+TGG + Chr3:69195854-69195873 MsG0380015373.01.T01:intron 20.0%
!!! TATTTTGCATATTTAATCTG+GGG + Chr3:69195856-69195875 MsG0380015373.01.T01:intron 20.0%
!!! TGTCTATTTTCTAAAGAATT+TGG + Chr3:69195978-69195997 MsG0380015373.01.T01:intron 20.0%
!!! TTTATTTTACATACCTGTTT+TGG + Chr3:69194442-69194461 MsG0380015373.01.T01:intron 20.0%
!!! TTTTACTATTCTTGAGAAAA+GGG + Chr3:69194925-69194944 MsG0380015373.01.T01:intron 20.0%
!!! TTTTTACTATTCTTGAGAAA+AGG + Chr3:69194924-69194943 MsG0380015373.01.T01:intron 20.0%
! AAAAACAATCTGTTGAAATG+AGG + Chr3:69195297-69195316 MsG0380015373.01.T01:intron 25.0%
! AACACTAATATTCATGCAAA+TGG + Chr3:69196205-69196224 MsG0380015373.01.T01:intron 25.0%
! AACTAAAATTAGAAATGGGA+TGG - Chr3:69193980-69193999 None:intergenic 25.0%
! AATTGTGTGTATGAATATGT+AGG + Chr3:69193730-69193749 MsG0380015373.01.T01:intron 25.0%
! ACATAAACATTAAACACTTG+TGG - Chr3:69194296-69194315 None:intergenic 25.0%
! ATAAACATTAAACACTTGTG+GGG - Chr3:69194294-69194313 None:intergenic 25.0%
! ATAAATTGAACTTGGGAATA+AGG - Chr3:69195112-69195131 None:intergenic 25.0%
! ATATCTATGATCAACAGTAA+TGG - Chr3:69195475-69195494 None:intergenic 25.0%
! ATATTGCTCAATATTCTTTG+AGG + Chr3:69195711-69195730 MsG0380015373.01.T01:intron 25.0%
! ATGCATATGATAGTACTAAA+AGG - Chr3:69193703-69193722 None:intergenic 25.0%
! ATTTATACCTAGAAACTTTG+GGG + Chr3:69195126-69195145 MsG0380015373.01.T01:intron 25.0%
! CAATTTATACCTAGAAACTT+TGG + Chr3:69195124-69195143 MsG0380015373.01.T01:intron 25.0%
! CATAAACATTAAACACTTGT+GGG - Chr3:69194295-69194314 None:intergenic 25.0%
! GAAACACAAATATAAGTAAC+AGG - Chr3:69194624-69194643 None:intergenic 25.0%
! GCTTTCATTTATTTCATTAG+TGG + Chr3:69196471-69196490 MsG0380015373.01.T01:intron 25.0%
! GTCAACAGTAATAATAGTTT+GGG + Chr3:69197010-69197029 MsG0380015373.01.T01:three_prime_UTR 25.0%
! GTTCAATATTTGATCTGATA+AGG - Chr3:69195833-69195852 None:intergenic 25.0%
! TCATGATCAATAAACTAAGA+CGG - Chr3:69196085-69196104 None:intergenic 25.0%
! TCTAGGTATAAATTGAACTT+GGG - Chr3:69195119-69195138 None:intergenic 25.0%
! TCTGATGCATAACTAAAATT+AGG + Chr3:69194044-69194063 MsG0380015373.01.T01:intron 25.0%
! TGCATATGATAGTACTAAAA+GGG - Chr3:69193702-69193721 None:intergenic 25.0%
! TGTCAACAGTAATAATAGTT+TGG + Chr3:69197009-69197028 MsG0380015373.01.T01:three_prime_UTR 25.0%
! TGTTTAATGTTTATGTCAGT+AGG + Chr3:69194300-69194319 MsG0380015373.01.T01:intron 25.0%
! TTATAACACTTAGGTTTGAT+AGG + Chr3:69195003-69195022 MsG0380015373.01.T01:intron 25.0%
! TTCTAGGTATAAATTGAACT+TGG - Chr3:69195120-69195139 None:intergenic 25.0%
! TTTACTATTCTTGAGAAAAG+GGG + Chr3:69194926-69194945 MsG0380015373.01.T01:intron 25.0%
!! AAGACAATCTTAATTTGAAC+AGG + Chr3:69196172-69196191 MsG0380015373.01.T01:intron 25.0%
!! AAGAGAGTTTTCATTTGTAT+GGG - Chr3:69196022-69196041 None:intergenic 25.0%
!! AGGAATCAATCTTTTATTGT+CGG + Chr3:69195380-69195399 MsG0380015373.01.T01:intron 25.0%
!! ATATTTAATCTGGGGTTAAT+AGG + Chr3:69195864-69195883 MsG0380015373.01.T01:intron 25.0%
!! CTGTTTTCTTTCAAGAAAAT+CGG - Chr3:69193261-69193280 None:intergenic 25.0%
!! TAAAAGATTGATTCCTTCAA+AGG - Chr3:69195376-69195395 None:intergenic 25.0%
!! TTAAGTTGTTGATCAAAACA+TGG - Chr3:69194070-69194089 None:intergenic 25.0%
!! TTTGTGTTTCTATTATAGGT+CGG + Chr3:69194634-69194653 MsG0380015373.01.T01:intron 25.0%
!! TTTTGAATATGGCATAATTC+AGG + Chr3:69193357-69193376 MsG0380015373.01.T01:CDS 25.0%
!!! GAAGTTATTTTCATTCTGTT+TGG + Chr3:69194591-69194610 MsG0380015373.01.T01:intron 25.0%
!!! GATTGTTTTTTAACTATGGA+TGG - Chr3:69195287-69195306 None:intergenic 25.0%
!!! TGTCATTCATTACTTTTGAT+TGG + Chr3:69194901-69194920 MsG0380015373.01.T01:intron 25.0%
AAACACAATCACTAATCTTC+AGG - Chr3:69196054-69196073 None:intergenic 30.0%
AAGTAAAACAGTCTAGACTA+AGG - Chr3:69194355-69194374 None:intergenic 30.0%
ACTATCCTGCAATAAAATAC+AGG - Chr3:69195508-69195527 None:intergenic 30.0%
ACTTAGTACTAAAGTTTAGC+CGG + Chr3:69197059-69197078 MsG0380015373.01.T01:three_prime_UTR 30.0%
AGTAAAACAGTCTAGACTAA+GGG - Chr3:69194354-69194373 None:intergenic 30.0%
ATAAGCTATCTTTATCTCAG+TGG + Chr3:69194806-69194825 MsG0380015373.01.T01:intron 30.0%
ATTGTAGTCAAGAAAGCAAT+TGG + Chr3:69194485-69194504 MsG0380015373.01.T01:intron 30.0%
CAAGTAGAATGTCAAATTTC+AGG + Chr3:69196736-69196755 MsG0380015373.01.T01:exon 30.0%
CTATCCTGCAATAAAATACA+GGG - Chr3:69195507-69195526 None:intergenic 30.0%
TATCCTGCAATAAAATACAG+GGG - Chr3:69195506-69195525 None:intergenic 30.0%
TATGAATATGTAGGAATCAC+CGG + Chr3:69193739-69193758 MsG0380015373.01.T01:intron 30.0%
TCTTAAGTAGCTGATGTAAA+TGG + Chr3:69195418-69195437 MsG0380015373.01.T01:intron 30.0%
TGAATCAAGAACAAATGGAA+TGG + Chr3:69196759-69196778 MsG0380015373.01.T01:three_prime_UTR 30.0%
! AAGTTTCGAAAGTGCAAAAA+AGG + Chr3:69194657-69194676 MsG0380015373.01.T01:CDS 30.0%
! ACTATTTTCATAAACTGTCG+TGG + Chr3:69194197-69194216 MsG0380015373.01.T01:intron 30.0%
! AGGCTTCTCACTAATTTTAT+TGG - Chr3:69195168-69195187 None:intergenic 30.0%
! CAAGAGAGTTTTCATTTGTA+TGG - Chr3:69196023-69196042 None:intergenic 30.0%
! GCAGGATAGTTTAATTTCAT+TGG + Chr3:69195518-69195537 MsG0380015373.01.T01:intron 30.0%
! TATGATCAACAGTAATGGAA+AGG - Chr3:69195470-69195489 None:intergenic 30.0%
! TGATTAAGAGACTAGTTGAA+GGG + Chr3:69196687-69196706 MsG0380015373.01.T01:CDS 30.0%
!! TTAAGATTGTCTTGACTTGT+TGG - Chr3:69196165-69196184 None:intergenic 30.0%
!!! GGAATATTGGGTTTTGAATA+TGG + Chr3:69193346-69193365 MsG0380015373.01.T01:CDS 30.0%
AAAATCACCCCAAAGTTTCT+AGG - Chr3:69195136-69195155 None:intergenic 35.0%
AAAATCGGATGTAGGAAGAA+TGG - Chr3:69193246-69193265 None:intergenic 35.0%
AAATTTCCCTGAAAACCTCA+TGG + Chr3:69195074-69195093 MsG0380015373.01.T01:intron 35.0%
AATAGGATGACTGAGGAAAA+TGG + Chr3:69195881-69195900 MsG0380015373.01.T01:intron 35.0%
AATTGGGAGCTAACTTCTAA+TGG - Chr3:69197134-69197153 None:intergenic 35.0%
ACCTTAACTGATAAACCCTT+TGG + Chr3:69193794-69193813 MsG0380015373.01.T01:CDS 35.0%
AGAACTAAACCAATCCCAAA+GGG - Chr3:69193812-69193831 None:intergenic 35.0%
ATCCTGCAATAAAATACAGG+GGG - Chr3:69195505-69195524 None:intergenic 35.0%
ATGTGAACTTGTGAAAACTC+TGG - Chr3:69196112-69196131 None:intergenic 35.0%
ATTGGGAGCTAACTTCTAAT+GGG - Chr3:69197133-69197152 None:intergenic 35.0%
CCTTAACTGATAAACCCTTT+GGG + Chr3:69193795-69193814 MsG0380015373.01.T01:CDS 35.0%
CGCAGTATTGCAAACTTATT+GGG + Chr3:69193880-69193899 MsG0380015373.01.T01:CDS 35.0%
CTGCAATAACAGGTATATCA+CGG - Chr3:69195572-69195591 None:intergenic 35.0%
CTTTCAAGAAAATCGGATGT+AGG - Chr3:69193254-69193273 None:intergenic 35.0%
GATAGTACTAAAAGGGAAAG+TGG - Chr3:69193695-69193714 None:intergenic 35.0%
GCAATGTTCATATCCTTTGA+AGG + Chr3:69195360-69195379 MsG0380015373.01.T01:intron 35.0%
GCAGTATTGCAAACTTATTG+GGG + Chr3:69193881-69193900 MsG0380015373.01.T01:CDS 35.0%
TAGAACTAAACCAATCCCAA+AGG - Chr3:69193813-69193832 None:intergenic 35.0%
TATGGATGGGAGTGAAAAAT+AGG - Chr3:69195273-69195292 None:intergenic 35.0%
TCAGGTGAATCAAGAACAAA+TGG + Chr3:69196754-69196773 MsG0380015373.01.T01:three_prime_UTR 35.0%
TCGCAGTATTGCAAACTTAT+TGG + Chr3:69193879-69193898 MsG0380015373.01.T01:CDS 35.0%
TGTTCAATCTTGTCACTGAA+AGG + Chr3:69195322-69195341 MsG0380015373.01.T01:intron 35.0%
TTACAGGCTTGTCAAGATAT+AGG - Chr3:69195055-69195074 None:intergenic 35.0%
! AACAGTAATGGAAAGGACTA+GGG - Chr3:69195463-69195482 None:intergenic 35.0%
! ATATACTTTTGTCATCCTCC+AGG + Chr3:69196538-69196557 MsG0380015373.01.T01:intron 35.0%
! GAATGTTTGCTGCTAAATGT+AGG + Chr3:69194551-69194570 MsG0380015373.01.T01:intron 35.0%
! GATTAAGAGACTAGTTGAAG+GGG + Chr3:69196688-69196707 MsG0380015373.01.T01:CDS 35.0%
! GTGATTAAGAGACTAGTTGA+AGG + Chr3:69196686-69196705 MsG0380015373.01.T01:CDS 35.0%
! TAAGGTATTAGCCTACATGT+AGG - Chr3:69195798-69195817 None:intergenic 35.0%
! TAGTGAGAAGCCTTAATTTG+AGG + Chr3:69195175-69195194 MsG0380015373.01.T01:intron 35.0%
!! ATTAGTGGAAGCATCTTTGT+AGG + Chr3:69196486-69196505 MsG0380015373.01.T01:intron 35.0%
!! GGTTTTCAGGGAAATTTTAC+AGG - Chr3:69195071-69195090 None:intergenic 35.0%
!! TTTAATTTCATTGGTGCCGA+GGG + Chr3:69195527-69195546 MsG0380015373.01.T01:CDS 35.0%
!!! GGGTTTTTTAAGAGAGCTTA+TGG - Chr3:69194274-69194293 None:intergenic 35.0%
ACATTCTTAAGTCAAGCAGC+TGG - Chr3:69194537-69194556 None:intergenic 40.0%
ACCTTGCAGAATGATTCCAT+CGG - Chr3:69194698-69194717 None:intergenic 40.0%
ACTCGATGAAACTGAGTACA+CGG + Chr3:69196297-69196316 MsG0380015373.01.T01:CDS 40.0%
ACTGAGTACACGGATGTATT+TGG + Chr3:69196307-69196326 MsG0380015373.01.T01:CDS 40.0%
AGACACCTTTCTTCAAAGAC+TGG + Chr3:69196368-69196387 MsG0380015373.01.T01:CDS 40.0%
AGTACTAAAGTTTAGCCGGA+GGG + Chr3:69197063-69197082 MsG0380015373.01.T01:three_prime_UTR 40.0%
ATGACTGAGGAAAATGGTGA+TGG + Chr3:69195887-69195906 MsG0380015373.01.T01:intron 40.0%
ATTACTTGAGGGAGCTCATA+AGG + Chr3:69193762-69193781 MsG0380015373.01.T01:CDS 40.0%
ATTGGATGATTGCTAGTTGG+TGG + Chr3:69194503-69194522 MsG0380015373.01.T01:intron 40.0%
ATTGGCCATTCAACGATTCA+TGG + Chr3:69196433-69196452 MsG0380015373.01.T01:CDS 40.0%
CCCAAAGGGTTTATCAGTTA+AGG - Chr3:69193798-69193817 None:intergenic 40.0%
CTCCTGTAGTTGTCATGTTT+GGG - Chr3:69196595-69196614 None:intergenic 40.0%
CTGAGTACACGGATGTATTT+GGG + Chr3:69196308-69196327 MsG0380015373.01.T01:CDS 40.0%
GATATACCTGTTATTGCAGC+TGG + Chr3:69195573-69195592 MsG0380015373.01.T01:CDS 40.0%
GCAAAAAAGGCAATTGATGC+AGG + Chr3:69194670-69194689 MsG0380015373.01.T01:CDS 40.0%
GCAATTGGATGATTGCTAGT+TGG + Chr3:69194500-69194519 MsG0380015373.01.T01:intron 40.0%
GTGTTCGGTAGATATTGACA+AGG + Chr3:69196896-69196915 MsG0380015373.01.T01:three_prime_UTR 40.0%
TAGTACTAAAGTTTAGCCGG+AGG + Chr3:69197062-69197081 MsG0380015373.01.T01:three_prime_UTR 40.0%
TCAATATCTACCGAACACAG+TGG - Chr3:69196894-69196913 None:intergenic 40.0%
TCTCCTGTAGTTGTCATGTT+TGG - Chr3:69196596-69196615 None:intergenic 40.0%
TGGGGTTAAAATTGTTCCAC+AGG + Chr3:69193943-69193962 MsG0380015373.01.T01:CDS 40.0%
TTCACGGCTTCCTCAAATTA+AGG - Chr3:69195188-69195207 None:intergenic 40.0%
TTCACTTTCATGAGCTGGAA+GGG - Chr3:69196398-69196417 None:intergenic 40.0%
TTGCAGTCAATTGTGACAGT+AGG - Chr3:69194970-69194989 None:intergenic 40.0%
TTGGGAGCTAACTTCTAATG+GGG - Chr3:69197132-69197151 None:intergenic 40.0%
! AACAGACCATGAGGTTTTCA+GGG - Chr3:69195083-69195102 None:intergenic 40.0%
! ATGTGCTTGCTAGAACAACA+TGG + Chr3:69196862-69196881 MsG0380015373.01.T01:three_prime_UTR 40.0%
! ATGTGTATCTGAGATGCCAA+CGG + Chr3:69196834-69196853 MsG0380015373.01.T01:three_prime_UTR 40.0%
! CAACAGTAATGGAAAGGACT+AGG - Chr3:69195464-69195483 None:intergenic 40.0%
! GATCTCCAGTCTTTGAAGAA+AGG - Chr3:69196376-69196395 None:intergenic 40.0%
! TTCCCCCTGTATTTTATTGC+AGG + Chr3:69195500-69195519 MsG0380015373.01.T01:intron 40.0%
!! ACTGATAAACCCTTTGGGAT+TGG + Chr3:69193800-69193819 MsG0380015373.01.T01:CDS 40.0%
!! ATGCAAATGGTCTTGTTTGC+AGG + Chr3:69196218-69196237 MsG0380015373.01.T01:intron 40.0%
!! ATGGGTTGGAGAGGAATATT+GGG + Chr3:69193334-69193353 MsG0380015373.01.T01:CDS 40.0%
!! GTTTAATTTCATTGGTGCCG+AGG + Chr3:69195526-69195545 MsG0380015373.01.T01:CDS 40.0%
!! TCTTGACTTGTTGGTGAATC+AGG - Chr3:69196156-69196175 None:intergenic 40.0%
!! TGAGGAAAATGGTGATGGAA+GGG + Chr3:69195892-69195911 MsG0380015373.01.T01:intron 40.0%
!! TGGAGAATGTCGACTTTCTT+TGG + Chr3:69196964-69196983 MsG0380015373.01.T01:three_prime_UTR 40.0%
!!! AGTTCTAGCTTTTCCTCATG+AGG + Chr3:69193826-69193845 MsG0380015373.01.T01:CDS 40.0%
AGAGAGAGAGGCTTCAACAT+GGG + Chr3:69193316-69193335 MsG0380015373.01.T01:exon 45.0%
AGGAATCACCGGATTACTTG+AGG + Chr3:69193750-69193769 MsG0380015373.01.T01:intron 45.0%
AGGTGGTCATGTTATTGGTC+AGG + Chr3:69194726-69194745 MsG0380015373.01.T01:CDS 45.0%
AGTCGACATTCTCCATACTG+AGG - Chr3:69196959-69196978 None:intergenic 45.0%
AGTTGAGGACCAGAGATATC+AGG - Chr3:69193394-69193413 None:intergenic 45.0%
ATACCTGTTATTGCAGCTGG+AGG + Chr3:69195576-69195595 MsG0380015373.01.T01:CDS 45.0%
ATCCATAGCAGCCTACATGT+AGG + Chr3:69195784-69195803 MsG0380015373.01.T01:intron 45.0%
ATCGTTGAATGGCCAATGAC+AGG - Chr3:69196430-69196449 None:intergenic 45.0%
ATGAGCCTTGGCAACCAATT+CGG - Chr3:69193918-69193937 None:intergenic 45.0%
ATGAGCTCCCTCAAGTAATC+CGG - Chr3:69193761-69193780 None:intergenic 45.0%
ATGTATGCTGGCCAAAGTGT+TGG + Chr3:69196632-69196651 MsG0380015373.01.T01:CDS 45.0%
ATGTATTTGGGAGAGCAAGG+TGG + Chr3:69196320-69196339 MsG0380015373.01.T01:CDS 45.0%
ATTCCTCCAGCTGCAATAAC+AGG - Chr3:69195582-69195601 None:intergenic 45.0%
CCTTGATGAGACCAACACTT+TGG - Chr3:69196646-69196665 None:intergenic 45.0%
CTTCACTTTCATGAGCTGGA+AGG - Chr3:69196399-69196418 None:intergenic 45.0%
GAAGCAGGTGGTCATGTTAT+TGG + Chr3:69194721-69194740 MsG0380015373.01.T01:CDS 45.0%
GATGGCATAAGACTAACCTG+TGG - Chr3:69193962-69193981 None:intergenic 45.0%
GGAATCACCGGATTACTTGA+GGG + Chr3:69193751-69193770 MsG0380015373.01.T01:intron 45.0%
GGGAGCTCATAAGGAAAACA+AGG + Chr3:69193771-69193790 MsG0380015373.01.T01:CDS 45.0%
GGGTGATTGTACAACCGAAT+TGG + Chr3:69193901-69193920 MsG0380015373.01.T01:CDS 45.0%
GTCCCAAACATGACAACTAC+AGG + Chr3:69196590-69196609 MsG0380015373.01.T01:CDS 45.0%
GTCTAGACTAAGGGACTGTT+TGG - Chr3:69194345-69194364 None:intergenic 45.0%
GTGAGCTACACACAGATTAC+AGG - Chr3:69195947-69195966 None:intergenic 45.0%
GTGTCAGTTCAAGCACAGAA+TGG + Chr3:69194858-69194877 MsG0380015373.01.T01:intron 45.0%
TACAACCGAATTGGTTGCCA+AGG + Chr3:69193910-69193929 MsG0380015373.01.T01:CDS 45.0%
TATGTTGCTGCTCTAGCACT+TGG + Chr3:69195618-69195637 MsG0380015373.01.T01:CDS 45.0%
TCCTCATGAGGAGAACTTGA+AGG + Chr3:69193838-69193857 MsG0380015373.01.T01:CDS 45.0%
TGGGGTTAATAGGATGACTG+AGG + Chr3:69195874-69195893 MsG0380015373.01.T01:intron 45.0%
TTGAATGGCCAATGACAGGT+TGG - Chr3:69196426-69196445 None:intergenic 45.0%
TTGCAGGTTTCTTGCAACTG+AGG + Chr3:69196234-69196253 MsG0380015373.01.T01:intron 45.0%
TTGGCTTCACTTTCATGAGC+TGG - Chr3:69196403-69196422 None:intergenic 45.0%
! ACCTTCAAGTTCTCCTCATG+AGG - Chr3:69193842-69193861 None:intergenic 45.0%
! AGTAATGGAAAGGACTAGGG+TGG - Chr3:69195460-69195479 None:intergenic 45.0%
! ATGGTTTGCACCACTGTGTT+CGG + Chr3:69196881-69196900 MsG0380015373.01.T01:three_prime_UTR 45.0%
! CAACGTCTGAGATGCATAGA+CGG - Chr3:69194248-69194267 None:intergenic 45.0%
! GAACAGACCATGAGGTTTTC+AGG - Chr3:69195084-69195103 None:intergenic 45.0%
! GAGAGCATGTGTATGTATGC+TGG + Chr3:69196620-69196639 MsG0380015373.01.T01:CDS 45.0%
! TGTCATGTTTGGGACTGTAC+CGG - Chr3:69196585-69196604 None:intergenic 45.0%
!! AAAGAGATACGCCGTTTTGC+CGG + Chr3:69196563-69196582 MsG0380015373.01.T01:CDS 45.0%
!! ATTGCTAGTTGGTGGCTAGT+AGG + Chr3:69194511-69194530 MsG0380015373.01.T01:intron 45.0%
!! CATGGGTTGGAGAGGAATAT+TGG + Chr3:69193333-69193352 MsG0380015373.01.T01:exon 45.0%
!! CCAAAGTGTTGGTCTCATCA+AGG + Chr3:69196643-69196662 MsG0380015373.01.T01:CDS 45.0%
!! CTGAGGAAAATGGTGATGGA+AGG + Chr3:69195891-69195910 MsG0380015373.01.T01:intron 45.0%
!! CTTTGAAGAAAGGTGTCTGC+AGG - Chr3:69196366-69196385 None:intergenic 45.0%
AACGGCGTATCTCTTTCTCC+TGG - Chr3:69196559-69196578 None:intergenic 50.0%
ACTTTGTTACGCGCTGCAGT+GGG + Chr3:69196926-69196945 MsG0380015373.01.T01:three_prime_UTR 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr3:69193302-69193321 MsG0380015373.01.T01:five_prime_UTR 50.0%
AGAGAGGCTTCAACATGGGT+TGG + Chr3:69193320-69193339 MsG0380015373.01.T01:exon 50.0%
AGCAAGCACATAACCTCCGT+TGG - Chr3:69196853-69196872 None:intergenic 50.0%
AGCCTACATGTAGGCTGCTA+TGG - Chr3:69195789-69195808 None:intergenic 50.0%
AGGATGCTGAACAGACCATG+AGG - Chr3:69195092-69195111 None:intergenic 50.0%
ATTCTGCAAGGTCGTGAAGC+AGG + Chr3:69194706-69194725 MsG0380015373.01.T01:CDS 50.0%
CCACGCCATGAATCGTTGAA+TGG - Chr3:69196441-69196460 None:intergenic 50.0%
CCACTAGGTCCTGATATCTC+TGG + Chr3:69193382-69193401 MsG0380015373.01.T01:CDS 50.0%
CCAGAGATATCAGGACCTAG+TGG - Chr3:69193385-69193404 None:intergenic 50.0%
CCATTCAACGATTCATGGCG+TGG + Chr3:69196438-69196457 MsG0380015373.01.T01:CDS 50.0%
CGGATGTAGGAAGAATGGTG+AGG - Chr3:69193241-69193260 None:intergenic 50.0%
CGGATGTATTTGGGAGAGCA+AGG + Chr3:69196317-69196336 MsG0380015373.01.T01:CDS 50.0%
GAAGCCAACCAACCTGTCAT+TGG + Chr3:69196415-69196434 MsG0380015373.01.T01:CDS 50.0%
GACTGTGTGAATGTCGTGTC+AGG + Chr3:69193571-69193590 MsG0380015373.01.T01:intron 50.0%
GAGAGAGAGAGGCTTCAACA+TGG + Chr3:69193315-69193334 MsG0380015373.01.T01:exon 50.0%
GCAACAGCAGCAACAAGTTG+AGG - Chr3:69193409-69193428 None:intergenic 50.0%
GCAGCTGGAGGAATTGTAGA+TGG + Chr3:69195588-69195607 MsG0380015373.01.T01:CDS 50.0%
GCCGATGGAATCATTCTGCA+AGG + Chr3:69194694-69194713 MsG0380015373.01.T01:CDS 50.0%
GGAGGAATTGTAGATGGTCG+AGG + Chr3:69195594-69195613 MsG0380015373.01.T01:CDS 50.0%
GGCATAATTCAGGCACCACT+AGG + Chr3:69193367-69193386 MsG0380015373.01.T01:CDS 50.0%
TAAGGGGGTGAGTGAAGCAA+AGG - Chr3:69193475-69193494 None:intergenic 50.0%
TCAGGTGTGCATGCTTGTCA+TGG + Chr3:69194744-69194763 MsG0380015373.01.T01:intron 50.0%
TTAGCCGGAGGGTAGCAAAT+GGG + Chr3:69197074-69197093 MsG0380015373.01.T01:three_prime_UTR 50.0%
TTTAGCCGGAGGGTAGCAAA+TGG + Chr3:69197073-69197092 MsG0380015373.01.T01:three_prime_UTR 50.0%
! TGTATCTGAGATGCCAACGG+AGG + Chr3:69196837-69196856 MsG0380015373.01.T01:three_prime_UTR 50.0%
! TTGGGACTGTACCGGCAAAA+CGG - Chr3:69196577-69196596 None:intergenic 50.0%
!! AAGCAAAGGTACCCAGTCAG+GGG - Chr3:69193461-69193480 None:intergenic 50.0%
!! AATTTCATTGGTGCCGAGGG+TGG + Chr3:69195530-69195549 MsG0380015373.01.T01:CDS 50.0%
!! ATGGCCAATGACAGGTTGGT+TGG - Chr3:69196422-69196441 None:intergenic 50.0%
!! GAAGCAAAGGTACCCAGTCA+GGG - Chr3:69193462-69193481 None:intergenic 50.0%
!! TGAAGCAAAGGTACCCAGTC+AGG - Chr3:69193463-69193482 None:intergenic 50.0%
AGGACACGATGTGGTGCATC+GGG - Chr3:69196346-69196365 None:intergenic 55.0%
CAGGACACGATGTGGTGCAT+CGG - Chr3:69196347-69196366 None:intergenic 55.0%
CCAACAAGATCGACCACCCT+CGG - Chr3:69195546-69195565 None:intergenic 55.0%
CGAGGGTGGTCGATCTTGTT+GGG + Chr3:69195544-69195563 MsG0380015373.01.T01:CDS 55.0%
GACTTTGTTACGCGCTGCAG+TGG + Chr3:69196925-69196944 MsG0380015373.01.T01:three_prime_UTR 55.0%
GAGGGTGGTCGATCTTGTTG+GGG + Chr3:69195545-69195564 MsG0380015373.01.T01:CDS 55.0%
GGCGTATCTCTTTCTCCTGG+AGG - Chr3:69196556-69196575 None:intergenic 55.0%
GTGGGTAGCTGACCTCAGTA+TGG + Chr3:69196944-69196963 MsG0380015373.01.T01:three_prime_UTR 55.0%
GTTGCTGCTGTTGCCAATGC+TGG + Chr3:69193415-69193434 MsG0380015373.01.T01:CDS 55.0%
TAGCCGGAGGGTAGCAAATG+GGG + Chr3:69197075-69197094 MsG0380015373.01.T01:three_prime_UTR 55.0%
TTGCCAAGGCTCATGCAGCT+GGG + Chr3:69193924-69193943 MsG0380015373.01.T01:CDS 55.0%
! AAGGCGTCTGTCTAGGCACT+AGG + Chr3:69195646-69195665 MsG0380015373.01.T01:CDS 55.0%
! TGGCGCTCTTGGTCTTCTCA+GGG + Chr3:69193435-69193454 MsG0380015373.01.T01:CDS 55.0%
!! AAGACCAAGAGCGCCAGCAT+TGG - Chr3:69193431-69193450 None:intergenic 55.0%
!! GCAATTGATGCAGGTGCCGA+TGG + Chr3:69194679-69194698 MsG0380015373.01.T01:CDS 55.0%
!! GCTCTAGCACTTGGTGCTCA+AGG + Chr3:69195627-69195646 MsG0380015373.01.T01:CDS 55.0%
!! GGCTTCAACATGGGTTGGAG+AGG + Chr3:69193325-69193344 MsG0380015373.01.T01:exon 55.0%
AACCCCAGCTGCATGAGCCT+TGG - Chr3:69193930-69193949 None:intergenic 60.0%
AGGGTAGCAAATGGGGTGGC+AGG + Chr3:69197082-69197101 MsG0380015373.01.T01:three_prime_UTR 60.0%
CCGAGGGTGGTCGATCTTGT+TGG + Chr3:69195543-69195562 MsG0380015373.01.T01:CDS 60.0%
CTGCAAGGTCGTGAAGCAGG+TGG + Chr3:69194709-69194728 MsG0380015373.01.T01:CDS 60.0%
GGTGTCTGCAGGACACGATG+TGG - Chr3:69196355-69196374 None:intergenic 60.0%
GTAGCAAATGGGGTGGCAGG+TGG + Chr3:69197085-69197104 MsG0380015373.01.T01:three_prime_UTR 60.0%
GTTGCCAAGGCTCATGCAGC+TGG + Chr3:69193923-69193942 MsG0380015373.01.T01:CDS 60.0%
GTTGCCAATGCTGGCGCTCT+TGG + Chr3:69193424-69193443 MsG0380015373.01.T01:CDS 60.0%
TCTTCTCAGGGCCCCTGACT+GGG + Chr3:69193447-69193466 MsG0380015373.01.T01:CDS 60.0%
TGCCAAGGCTCATGCAGCTG+GGG + Chr3:69193925-69193944 MsG0380015373.01.T01:CDS 60.0%
! CCACCCCATTTGCTACCCTC+CGG - Chr3:69197081-69197100 None:intergenic 60.0%
! CTGGCGCTCTTGGTCTTCTC+AGG + Chr3:69193434-69193453 MsG0380015373.01.T01:CDS 60.0%
! GGTGCTCAAGGCGTCTGTCT+AGG + Chr3:69195639-69195658 MsG0380015373.01.T01:CDS 60.0%
CCGGAGGGTAGCAAATGGGG+TGG + Chr3:69197078-69197097 MsG0380015373.01.T01:three_prime_UTR 65.0%
GTCTTCTCAGGGCCCCTGAC+TGG + Chr3:69193446-69193465 MsG0380015373.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 69193215 69197220 69193215 ID=MsG0380015373.01;Name=MsG0380015373.01
Chr3 mRNA 69193215 69197220 69193215 ID=MsG0380015373.01.T01;Parent=MsG0380015373.01;Name=MsG0380015373.01.T01;_AED=0.33;_eAED=0.33;_QI=119|1|1|1|1|1|6|478|330
Chr3 exon 69193215 69193468 69193215 ID=MsG0380015373.01.T01:exon:234;Parent=MsG0380015373.01.T01
Chr3 exon 69193752 69193964 69193752 ID=MsG0380015373.01.T01:exon:235;Parent=MsG0380015373.01.T01
Chr3 exon 69194652 69194747 69194652 ID=MsG0380015373.01.T01:exon:236;Parent=MsG0380015373.01.T01
Chr3 exon 69195522 69195667 69195522 ID=MsG0380015373.01.T01:exon:237;Parent=MsG0380015373.01.T01
Chr3 exon 69196240 69196459 69196240 ID=MsG0380015373.01.T01:exon:238;Parent=MsG0380015373.01.T01
Chr3 exon 69196560 69197220 69196560 ID=MsG0380015373.01.T01:exon:239;Parent=MsG0380015373.01.T01
Chr3 five_prime_UTR 69193215 69193333 69193215 ID=MsG0380015373.01.T01:five_prime_utr;Parent=MsG0380015373.01.T01
Chr3 CDS 69193334 69193468 69193334 ID=MsG0380015373.01.T01:cds;Parent=MsG0380015373.01.T01
Chr3 CDS 69193752 69193964 69193752 ID=MsG0380015373.01.T01:cds;Parent=MsG0380015373.01.T01
Chr3 CDS 69194652 69194747 69194652 ID=MsG0380015373.01.T01:cds;Parent=MsG0380015373.01.T01
Chr3 CDS 69195522 69195667 69195522 ID=MsG0380015373.01.T01:cds;Parent=MsG0380015373.01.T01
Chr3 CDS 69196240 69196459 69196240 ID=MsG0380015373.01.T01:cds;Parent=MsG0380015373.01.T01
Chr3 CDS 69196560 69196742 69196560 ID=MsG0380015373.01.T01:cds;Parent=MsG0380015373.01.T01
Chr3 three_prime_UTR 69196743 69197220 69196743 ID=MsG0380015373.01.T01:three_prime_utr;Parent=MsG0380015373.01.T01
Gene Sequence

>MsG0380015373.01.T01

ATGGGTTGGAGAGGAATATTGGGTTTTGAATATGGCATAATTCAGGCACCACTAGGTCCTGATATCTCTGGTCCTCAACTTGTTGCTGCTGTTGCCAATGCTGGCGCTCTTGGTCTTCTCAGGGCCCCTGACTGGGAATCACCGGATTACTTGAGGGAGCTCATAAGGAAAACAAGGACCTTAACTGATAAACCCTTTGGGATTGGTTTAGTTCTAGCTTTTCCTCATGAGGAGAACTTGAAGGTCATTCTTGACGAAAAAGTCGCAGTATTGCAAACTTATTGGGGTGATTGTACAACCGAATTGGTTGCCAAGGCTCATGCAGCTGGGGTTAAAATTGTTCCACAGGTCGGAAGTTTCGAAAGTGCAAAAAAGGCAATTGATGCAGGTGCCGATGGAATCATTCTGCAAGGTCGTGAAGCAGGTGGTCATGTTATTGGTCAGGATAGTTTAATTTCATTGGTGCCGAGGGTGGTCGATCTTGTTGGGGACCGTGATATACCTGTTATTGCAGCTGGAGGAATTGTAGATGGTCGAGGTTATGTTGCTGCTCTAGCACTTGGTGCTCAAGGCGTCTGTCTAGGCACTAGGTTTCTTGCAACTGAGGAAAGCTATGCTCATCCTATATACAAAAGAAAGTTAGTTGAACTCGATGAAACTGAGTACACGGATGTATTTGGGAGAGCAAGGTGGCCCGATGCACCACATCGTGTCCTGCAGACACCTTTCTTCAAAGACTGGAGATCCCTTCCAGCTCATGAAAGTGAAGCCAACCAACCTGTCATTGGCCATTCAACGATTCATGGCGTGGAGAAAGAGATACGCCGTTTTGCCGGTACAGTCCCAAACATGACAACTACAGGAGATCTTGAGAGCATGTGTATGTATGCTGGCCAAAGTGTTGGTCTCATCAAGGAAATTTTGTCTGCTCGTGAAGTGATTAAGAGACTAGTTGAAGGGGCACAACTTATAATACAGCAAAACTTCAAGTAG
Protein sequence

>MsG0380015373.01.T01

MGWRGILGFEYGIIQAPLGPDISGPQLVAAVANAGALGLLRAPDWESPDYLRELIRKTRTLTDKPFGIGLVLAFPHEENLKVILDEKVAVLQTYWGDCTTELVAKAHAAGVKIVPQVGSFESAKKAIDAGADGIILQGREAGGHVIGQDSLISLVPRVVDLVGDRDIPVIAAGGIVDGRGYVAALALGAQGVCLGTRFLATEESYAHPIYKRKLVELDETEYTDVFGRARWPDAPHRVLQTPFFKDWRSLPAHESEANQPVIGHSTIHGVEKEIRRFAGTVPNMTTTGDLESMCMYAGQSVGLIKEILSAREVIKRLVEGAQLIIQQNFK*