AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010426.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010426.01.T01 MTR_2g084010 96.226 318 12 0 1 318 1 318 0.0 627
MsG0280010426.01.T01 MTR_2g084020 91.824 318 26 0 1 318 1 318 0.0 600
MsG0280010426.01.T01 MTR_2g084110 85.849 318 44 1 1 318 1 317 0.0 560
MsG0280010426.01.T01 MTR_2g084080 84.277 318 49 1 1 318 1 317 0.0 549
MsG0280010426.01.T01 MTR_2g084000 82.132 319 56 1 1 318 1 319 0.0 544
MsG0280010426.01.T01 MTR_2g084090 75.862 319 75 2 1 318 1 318 7.23e-177 492
MsG0280010426.01.T01 MTR_3g094650 65.916 311 103 2 10 318 13 322 5.42e-146 414
MsG0280010426.01.T01 MTR_3g094670 65.495 313 105 3 8 318 11 322 2.25e-140 400
MsG0280010426.01.T01 MTR_3g094630 64.669 317 107 3 4 318 9 322 4.26e-137 391
MsG0280010426.01.T01 MTR_7g072510 58.387 310 128 1 9 318 4 312 1.96e-132 379
MsG0280010426.01.T01 MTR_5g083860 59.365 315 124 3 7 318 12 325 7.53e-132 378
MsG0280010426.01.T01 MTR_7g072480 56.452 310 134 1 9 318 8 316 4.18e-126 363
MsG0280010426.01.T01 MTR_3g466200 54.777 314 138 3 8 318 8 320 2.36e-125 362
MsG0280010426.01.T01 MTR_1g115900 55.625 320 139 2 1 318 3 321 2.96e-122 354
MsG0280010426.01.T01 MTR_3g466180 58.599 314 128 2 5 318 12 323 1.34e-120 349
MsG0280010426.01.T01 MTR_4g029170 55.732 314 136 3 7 318 9 321 6.72e-120 348
MsG0280010426.01.T01 MTR_3g072190 55.769 312 137 1 7 318 8 318 9.61e-119 345
MsG0280010426.01.T01 MTR_5g074860 55.556 315 134 5 7 317 12 324 2.24e-117 341
MsG0280010426.01.T01 MTR_5g074970 54.517 321 140 4 2 318 8 326 3.83e-117 341
MsG0280010426.01.T01 MTR_5g074760 56.954 302 125 4 21 318 21 321 4.45e-117 340
MsG0280010426.01.T01 MTR_4g029200 55.743 296 130 1 23 318 44 338 1.90e-116 340
MsG0280010426.01.T01 MTR_5g074740 56.954 302 125 4 21 318 21 321 3.99e-116 338
MsG0280010426.01.T01 MTR_7g026990 52.381 315 146 3 6 318 10 322 4.50e-115 335
MsG0280010426.01.T01 MTR_4g083710 54.140 314 137 3 9 318 14 324 7.19e-114 332
MsG0280010426.01.T01 MTR_5g074710 54.747 316 137 5 7 318 8 321 1.41e-113 332
MsG0280010426.01.T01 MTR_4g029180 55.973 293 126 3 28 318 30 321 5.00e-113 330
MsG0280010426.01.T01 MTR_3g467600 51.746 315 148 3 8 318 10 324 1.04e-112 330
MsG0280010426.01.T01 MTR_5g021060 52.159 301 137 1 25 318 30 330 1.92e-111 327
MsG0280010426.01.T01 MTR_4g029190 54.667 300 132 3 22 318 42 340 3.15e-111 326
MsG0280010426.01.T01 MTR_5g017860 51.692 325 147 4 2 318 4 326 9.90e-109 319
MsG0280010426.01.T01 MTR_5g017850 52.532 316 137 5 11 318 16 326 3.00e-107 316
MsG0280010426.01.T01 MTR_4g074995 51.899 316 132 4 7 318 9 308 7.68e-107 314
MsG0280010426.01.T01 MTR_8g076820 50.166 301 143 1 25 318 30 330 2.14e-106 314
MsG0280010426.01.T01 MTR_1g054205 50.163 307 144 3 21 318 20 326 1.55e-102 304
MsG0280010426.01.T01 MTR_2g040000 49.689 322 145 4 8 318 16 331 3.84e-101 300
MsG0280010426.01.T01 MTR_4g125940 50.327 306 140 3 23 318 26 329 1.51e-100 299
MsG0280010426.01.T01 MTR_7g093370 48.860 307 148 3 21 318 65 371 4.10e-100 299
MsG0280010426.01.T01 MTR_4g074990 50.498 301 129 3 22 318 21 305 8.06e-99 293
MsG0280010426.01.T01 MTR_1g022970 50.331 302 142 2 25 318 46 347 2.19e-98 294
MsG0280010426.01.T01 MTR_3g072190 57.371 251 106 1 68 318 2 251 1.56e-96 286
MsG0280010426.01.T01 MTR_2g029815 45.886 316 163 2 11 318 15 330 1.71e-94 284
MsG0280010426.01.T01 MTR_2g029750 47.231 307 154 2 20 318 24 330 2.06e-94 284
MsG0280010426.01.T01 MTR_2g029860 47.059 306 154 2 21 318 25 330 2.45e-94 284
MsG0280010426.01.T01 MTR_2g029560 47.368 304 152 2 23 318 22 325 3.78e-94 283
MsG0280010426.01.T01 MTR_4g122640 46.205 303 158 1 21 318 34 336 7.00e-94 282
MsG0280010426.01.T01 MTR_5g049280 44.073 329 166 6 8 318 9 337 8.87e-94 282
MsG0280010426.01.T01 MTR_2g029830 46.580 307 156 2 20 318 23 329 1.62e-93 282
MsG0280010426.01.T01 MTR_2g029850 45.846 325 168 2 2 318 6 330 1.08e-92 280
MsG0280010426.01.T01 MTR_2g029800 44.923 325 171 2 2 318 6 330 1.52e-92 279
MsG0280010426.01.T01 MTR_2g029740 46.254 307 157 2 20 318 24 330 9.19e-92 277
MsG0280010426.01.T01 MTR_4g030890 47.386 306 150 4 20 318 95 396 1.12e-91 279
MsG0280010426.01.T01 MTR_2g028980 45.860 314 162 2 13 318 17 330 1.34e-91 277
MsG0280010426.01.T01 MTR_5g074860 48.254 315 118 7 7 317 12 285 3.12e-91 273
MsG0280010426.01.T01 MTR_5g014100 47.231 307 148 3 25 318 26 331 4.98e-91 275
MsG0280010426.01.T01 MTR_2g029820 45.223 314 164 2 13 318 17 330 8.89e-91 275
MsG0280010426.01.T01 MTR_2g029910 45.092 326 170 3 2 318 7 332 1.45e-90 274
MsG0280010426.01.T01 MTR_4g074980 45.886 316 143 4 4 318 6 294 1.37e-89 270
MsG0280010426.01.T01 MTR_2g029730 46.382 304 155 2 23 318 23 326 5.52e-89 270
MsG0280010426.01.T01 MTR_4g125940 50.545 275 124 3 54 318 2 274 4.02e-88 265
MsG0280010426.01.T01 MTR_3g092990 42.724 323 174 4 6 318 5 326 9.80e-86 261
MsG0280010426.01.T01 MTR_4g074980 51.600 250 115 3 4 249 6 253 1.27e-84 255
MsG0280010426.01.T01 MTR_4g031140 43.279 305 162 4 21 318 24 324 1.28e-83 256
MsG0280010426.01.T01 MTR_0155s0040 40.446 314 179 7 7 318 8 315 3.30e-82 251
MsG0280010426.01.T01 MTR_2g088770 42.633 319 173 4 8 318 9 325 1.98e-80 247
MsG0280010426.01.T01 MTR_4g046713 40.123 324 182 5 5 318 5 326 8.64e-77 238
MsG0280010426.01.T01 MTR_4g114210 42.331 326 168 7 7 318 1 320 1.61e-76 237
MsG0280010426.01.T01 MTR_3g092990 40.867 323 169 5 6 318 5 315 2.32e-75 234
MsG0280010426.01.T01 MTR_7g107520 40.752 319 177 4 7 318 7 320 9.92e-75 233
MsG0280010426.01.T01 MTR_1g101830 39.130 322 181 8 5 318 8 322 1.31e-74 232
MsG0280010426.01.T01 MTR_8g075100 40.260 308 166 6 20 318 21 319 1.32e-74 232
MsG0280010426.01.T01 MTR_2g008710 42.857 301 155 6 29 318 31 325 2.60e-74 231
MsG0280010426.01.T01 MTR_5g022870 39.755 327 174 7 1 318 4 316 3.26e-74 231
MsG0280010426.01.T01 MTR_2g029830 46.484 256 129 2 71 318 6 261 5.92e-74 229
MsG0280010426.01.T01 MTR_1g009750 40.557 323 178 7 7 318 9 328 1.77e-73 229
MsG0280010426.01.T01 MTR_1g025980 40.061 327 170 9 1 317 7 317 4.69e-73 228
MsG0280010426.01.T01 MTR_1g086320 40.123 324 178 6 7 318 14 333 1.98e-72 227
MsG0280010426.01.T01 MTR_7g029030 38.199 322 193 4 1 318 1 320 3.16e-72 226
MsG0280010426.01.T01 MTR_5g016010 38.602 329 189 5 1 317 1 328 1.48e-71 224
MsG0280010426.01.T01 MTR_7g086820 39.344 305 166 6 23 318 18 312 3.46e-71 223
MsG0280010426.01.T01 MTR_6g027440 40.566 318 179 6 6 318 2 314 1.14e-70 222
MsG0280010426.01.T01 MTR_1g077000 38.438 320 189 7 1 318 14 327 2.69e-70 221
MsG0280010426.01.T01 MTR_1g038680 42.193 301 162 5 29 318 33 332 4.08e-70 221
MsG0280010426.01.T01 MTR_7g086870 40.068 292 167 6 29 318 26 311 1.63e-69 219
MsG0280010426.01.T01 MTR_1g086490 38.671 331 180 6 7 318 14 340 4.51e-69 219
MsG0280010426.01.T01 MTR_5g074700 50.661 227 93 5 96 318 3 214 9.81e-69 214
MsG0280010426.01.T01 MTR_4g095450 39.482 309 181 4 14 317 16 323 3.08e-68 216
MsG0280010426.01.T01 MTR_6g043280 39.506 324 178 8 7 318 15 332 4.47e-68 216
MsG0280010426.01.T01 MTR_2g437770 38.796 299 165 7 28 318 53 341 3.46e-67 214
MsG0280010426.01.T01 MTR_4g133800 39.394 297 163 6 30 318 46 333 2.62e-66 211
MsG0280010426.01.T01 MTR_4g087965 39.077 325 185 7 4 316 21 344 1.06e-65 210
MsG0280010426.01.T01 MTR_4g132490 35.430 302 186 4 24 318 28 327 2.52e-62 201
MsG0280010426.01.T01 MTR_3g105790 36.086 327 195 3 1 318 1 322 2.55e-62 201
MsG0280010426.01.T01 MTR_1g066710 34.551 301 190 4 23 318 25 323 2.92e-62 201
MsG0280010426.01.T01 MTR_6g043240 39.384 292 169 6 29 318 46 331 9.16e-62 200
MsG0280010426.01.T01 MTR_2g078610 37.462 331 165 9 28 318 79 407 9.59e-62 202
MsG0280010426.01.T01 MTR_4g127670 38.538 301 171 5 24 314 23 319 1.79e-61 199
MsG0280010426.01.T01 MTR_2g067440 36.391 327 168 7 28 317 63 386 2.05e-61 200
MsG0280010426.01.T01 MTR_2g008160 39.032 310 171 8 21 318 20 323 2.32e-61 198
MsG0280010426.01.T01 MTR_2g077990 36.970 330 166 8 28 317 79 406 2.91e-61 201
MsG0280010426.01.T01 MTR_1g090760 35.220 318 195 5 11 318 14 330 5.40e-61 197
MsG0280010426.01.T01 MTR_1g066640 34.884 301 189 4 23 318 25 323 6.17e-60 195
MsG0280010426.01.T01 MTR_3g072210 54.054 185 84 1 135 318 54 238 5.15e-59 189
MsG0280010426.01.T01 MTR_8g062780 35.168 327 200 7 1 318 1 324 1.55e-58 191
MsG0280010426.01.T01 MTR_1g066380 33.555 301 193 4 23 318 25 323 1.65e-58 191
MsG0280010426.01.T01 MTR_1g009750 35.604 323 177 8 7 318 9 311 1.80e-58 191
MsG0280010426.01.T01 MTR_2g099175 33.531 337 199 7 1 318 5 335 5.47e-58 190
MsG0280010426.01.T01 MTR_6g043460 35.385 325 196 7 1 314 3 324 6.21e-57 187
MsG0280010426.01.T01 MTR_2g008730 37.195 328 164 7 3 318 4 301 7.15e-57 186
MsG0280010426.01.T01 MTR_0286s0010 34.839 310 185 6 21 318 30 334 9.57e-57 187
MsG0280010426.01.T01 MTR_6g008075 34.839 310 185 6 21 318 30 334 9.57e-57 187
MsG0280010426.01.T01 MTR_2g078280 36.392 316 160 7 28 304 79 392 1.38e-56 188
MsG0280010426.01.T01 MTR_1g066680 34.219 301 190 5 23 318 25 322 3.11e-56 185
MsG0280010426.01.T01 MTR_7g072490 42.324 241 84 3 71 311 2 187 9.38e-55 177
MsG0280010426.01.T01 MTR_4g132110 33.333 327 203 6 5 318 4 328 1.90e-52 176
MsG0280010426.01.T01 MTR_2g067450 36.333 300 177 7 28 317 14 309 3.87e-52 174
MsG0280010426.01.T01 MTR_4g132110 32.831 332 203 7 5 318 4 333 3.06e-50 170
MsG0280010426.01.T01 MTR_5g033470 33.981 309 177 7 29 318 77 377 1.26e-49 169
MsG0280010426.01.T01 MTR_0147s0010 31.861 317 174 5 28 317 80 381 3.65e-49 168
MsG0280010426.01.T01 MTR_2g008160 35.526 304 155 8 21 318 20 288 1.14e-47 162
MsG0280010426.01.T01 MTR_1g066380 33.725 255 162 4 69 318 3 255 1.07e-44 153
MsG0280010426.01.T01 MTR_3g072260 58.730 126 52 0 7 132 8 133 2.07e-44 149
MsG0280010426.01.T01 MTR_2g008160 44.253 174 93 3 21 194 20 189 7.35e-42 144
MsG0280010426.01.T01 MTR_3g105790 37.500 240 140 2 88 318 8 246 2.00e-41 144
MsG0280010426.01.T01 MTR_2g029880 38.579 197 101 4 131 318 3 188 6.84e-38 134
MsG0280010426.01.T01 MTR_2g077980 31.295 278 142 10 87 318 11 285 1.07e-26 106
MsG0280010426.01.T01 MTR_5g074770 52.222 90 41 2 229 317 20 108 1.88e-24 95.9
MsG0280010426.01.T01 MTR_2g078560 30.876 217 111 5 136 314 101 316 2.33e-24 101
MsG0280010426.01.T01 MTR_3g462850 40.411 146 74 7 185 318 5 149 2.68e-24 96.7
MsG0280010426.01.T01 MTR_7g086790 40.833 120 67 2 72 191 17 132 6.51e-24 97.1
MsG0280010426.01.T01 MTR_4g031040 34.545 165 71 3 86 250 3 130 1.55e-20 86.3
MsG0280010426.01.T01 MTR_1g089005 39.394 132 73 2 11 136 1 131 8.82e-20 84.7
MsG0280010426.01.T01 MTR_4g114220 50.588 85 32 2 50 134 28 102 5.13e-19 82.4
MsG0280010426.01.T01 MTR_5g058120 34.416 154 96 3 161 314 7 155 5.72e-18 82.4
MsG0280010426.01.T01 MTR_6g048160 51.389 72 31 2 64 135 22 89 1.33e-16 74.3
MsG0280010426.01.T01 MTR_3g107060 24.632 272 139 8 40 297 91 310 1.42e-15 76.6
MsG0280010426.01.T01 MTR_2g029930 41.176 102 32 3 21 108 15 102 5.90e-15 70.1
MsG0280010426.01.T01 MTR_7g086810 32.231 121 56 1 23 143 4 98 7.71e-14 70.5
MsG0280010426.01.T01 MTR_7g086785 30.303 132 91 1 71 202 4 134 5.13e-13 65.9
MsG0280010426.01.T01 MTR_7g107500 43.529 85 46 1 234 318 15 97 5.13e-13 64.7
MsG0280010426.01.T01 MTR_1g098320 43.038 79 44 1 240 318 47 124 7.32e-13 65.5
MsG0280010426.01.T01 MTR_4g012865 38.462 65 40 0 28 92 80 144 1.43e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010426.01.T01 AT5G05340 62.752 298 108 2 23 318 28 324 1.27e-134 385
MsG0280010426.01.T01 AT5G58400 55.732 314 135 3 8 318 13 325 8.07e-117 340
MsG0280010426.01.T01 AT5G58390 57.188 313 130 3 9 318 5 316 6.71e-116 337
MsG0280010426.01.T01 AT4G36430 49.673 306 147 1 20 318 25 330 1.86e-109 322
MsG0280010426.01.T01 AT5G66390 48.788 330 155 2 3 318 4 333 4.20e-108 318
MsG0280010426.01.T01 AT1G14550 50.633 316 152 3 7 318 6 321 1.24e-107 317
MsG0280010426.01.T01 AT3G50990 51.307 306 142 1 20 318 36 341 1.20e-106 315
MsG0280010426.01.T01 AT1G14540 48.882 313 159 1 7 318 3 315 2.99e-106 313
MsG0280010426.01.T01 AT2G18140 49.834 301 144 1 25 318 35 335 3.74e-106 313
MsG0280010426.01.T01 AT2G18150 49.502 301 145 1 25 318 36 336 2.49e-105 311
MsG0280010426.01.T01 AT1G44970 52.632 304 136 2 23 318 43 346 5.78e-104 308
MsG0280010426.01.T01 AT1G49570 52.703 296 129 4 29 314 52 346 1.03e-103 308
MsG0280010426.01.T01 AT5G06720 47.720 329 160 4 1 318 6 333 3.11e-102 303
MsG0280010426.01.T01 AT5G06730 47.771 314 155 3 13 318 22 334 3.07e-100 299
MsG0280010426.01.T01 AT3G32980 47.975 321 157 3 8 318 14 334 6.78e-99 295
MsG0280010426.01.T01 AT2G38390 48.065 310 152 3 18 318 24 333 3.47e-98 293
MsG0280010426.01.T01 AT4G08780 48.867 309 146 5 21 318 20 327 7.86e-98 292
MsG0280010426.01.T01 AT5G19890 47.368 323 154 5 6 318 11 327 1.97e-96 288
MsG0280010426.01.T01 AT4G08770 47.403 308 152 3 21 318 20 327 1.62e-95 286
MsG0280010426.01.T01 AT3G49120 46.584 322 162 3 7 318 14 335 2.18e-95 286
MsG0280010426.01.T01 AT3G49110 45.342 322 166 3 7 318 15 336 3.33e-93 281
MsG0280010426.01.T01 AT2G38380 45.768 319 164 3 9 318 15 333 1.63e-91 276
MsG0280010426.01.T01 AT2G22420 43.385 325 171 5 1 318 1 319 2.79e-90 273
MsG0280010426.01.T01 AT4G16270 47.138 297 148 3 29 318 54 348 3.69e-89 270
MsG0280010426.01.T01 AT1G68850 40.663 332 176 8 7 318 5 335 4.31e-88 267
MsG0280010426.01.T01 AT2G35380 44.681 329 162 5 9 318 8 335 7.34e-88 267
MsG0280010426.01.T01 AT5G19880 44.720 322 166 4 8 318 9 329 1.19e-84 258
MsG0280010426.01.T01 AT5G15180 41.693 319 176 4 7 318 14 329 1.19e-82 253
MsG0280010426.01.T01 AT3G03670 41.956 317 174 4 9 318 8 321 5.60e-78 241
MsG0280010426.01.T01 AT3G01190 41.104 326 179 6 1 318 1 321 7.18e-78 241
MsG0280010426.01.T01 AT1G05260 40.789 304 170 4 23 318 24 325 1.95e-77 239
MsG0280010426.01.T01 AT4G11290 40.850 306 173 2 21 318 21 326 4.99e-77 239
MsG0280010426.01.T01 AT5G42180 39.752 322 180 6 4 317 1 316 5.57e-76 236
MsG0280010426.01.T01 AT5G64120 44.257 296 153 5 29 318 39 328 1.15e-75 235
MsG0280010426.01.T01 AT5G14130 40.439 319 178 6 8 318 16 330 1.24e-75 235
MsG0280010426.01.T01 AT5G14130 40.439 319 178 6 8 318 57 371 2.84e-75 236
MsG0280010426.01.T01 AT2G41480 40.123 324 175 7 8 318 11 328 4.79e-74 231
MsG0280010426.01.T01 AT3G21770 39.604 303 173 4 20 314 24 324 1.15e-73 230
MsG0280010426.01.T01 AT1G05240 40.132 304 162 6 28 318 29 325 1.49e-73 230
MsG0280010426.01.T01 AT1G05250 40.132 304 162 6 28 318 29 325 1.49e-73 230
MsG0280010426.01.T01 AT5G17820 39.937 318 173 6 8 318 7 313 1.10e-72 227
MsG0280010426.01.T01 AT5G17820 39.937 318 173 6 8 318 60 366 8.47e-72 226
MsG0280010426.01.T01 AT1G71695 41.581 291 164 5 28 314 47 335 1.51e-71 226
MsG0280010426.01.T01 AT4G37530 39.935 308 174 4 21 318 23 329 6.24e-71 223
MsG0280010426.01.T01 AT4G30170 41.234 308 164 7 22 318 24 325 1.53e-70 222
MsG0280010426.01.T01 AT5G67400 39.009 323 185 5 7 318 8 329 3.08e-70 221
MsG0280010426.01.T01 AT2G18980 39.873 316 175 5 13 318 13 323 2.64e-69 219
MsG0280010426.01.T01 AT5G39580 42.088 297 159 6 29 318 29 319 9.04e-69 217
MsG0280010426.01.T01 AT3G49960 39.241 316 181 4 13 318 15 329 1.15e-68 217
MsG0280010426.01.T01 AT4G37520 38.235 306 178 4 23 318 25 329 4.87e-68 216
MsG0280010426.01.T01 AT3G28200 38.411 302 182 4 20 318 16 316 1.48e-67 214
MsG0280010426.01.T01 AT5G40150 37.954 303 183 4 20 318 27 328 5.65e-67 213
MsG0280010426.01.T01 AT4G33420 38.125 320 190 7 1 318 12 325 2.39e-66 211
MsG0280010426.01.T01 AT1G30870 38.762 307 162 8 25 314 44 341 5.93e-66 211
MsG0280010426.01.T01 AT4G37520 37.908 306 176 5 23 318 25 326 7.64e-66 210
MsG0280010426.01.T01 AT5G51890 37.072 321 183 8 7 318 12 322 1.30e-65 209
MsG0280010426.01.T01 AT4G33420 38.125 320 190 7 1 318 59 372 1.33e-65 211
MsG0280010426.01.T01 AT4G33870 34.743 331 168 7 28 314 71 397 2.97e-65 211
MsG0280010426.01.T01 AT2G35380 46.939 245 116 4 87 318 4 247 3.37e-65 206
MsG0280010426.01.T01 AT4G26010 38.438 320 184 8 1 318 1 309 3.50e-65 207
MsG0280010426.01.T01 AT4G26010 38.438 320 184 8 1 318 29 337 6.85e-65 208
MsG0280010426.01.T01 AT4G25980 37.349 332 188 9 1 318 1 326 1.09e-64 207
MsG0280010426.01.T01 AT5G64110 40.361 332 173 8 4 318 7 330 2.75e-64 206
MsG0280010426.01.T01 AT2G34060 38.264 311 179 6 18 316 35 344 3.35e-63 204
MsG0280010426.01.T01 AT4G17690 37.627 295 179 4 28 318 29 322 4.54e-63 203
MsG0280010426.01.T01 AT2G39040 39.228 311 172 7 22 318 43 350 1.46e-62 202
MsG0280010426.01.T01 AT5G64100 37.725 334 180 8 5 318 6 331 3.70e-62 201
MsG0280010426.01.T01 AT1G77100 39.450 327 181 11 1 318 1 319 4.28e-61 197
MsG0280010426.01.T01 AT4G37530 41.406 256 140 3 21 266 23 278 5.38e-61 196
MsG0280010426.01.T01 AT4G31760 35.692 325 191 4 3 318 11 326 1.24e-59 194
MsG0280010426.01.T01 AT1G34510 37.459 307 184 6 13 318 10 309 1.43e-59 193
MsG0280010426.01.T01 AT5G47000 35.737 319 196 5 8 318 13 330 2.88e-59 193
MsG0280010426.01.T01 AT5G22410 36.000 325 187 9 3 315 7 322 3.78e-59 193
MsG0280010426.01.T01 AT5G24070 36.577 298 170 5 33 318 45 335 1.35e-58 192
MsG0280010426.01.T01 AT2G24800 36.275 306 180 4 23 318 29 329 1.93e-58 191
MsG0280010426.01.T01 AT2G43480 35.452 299 172 6 33 318 45 335 1.05e-55 184
MsG0280010426.01.T01 AT1G24110 35.016 317 195 5 11 318 8 322 1.23e-55 184
MsG0280010426.01.T01 AT2G37130 33.974 312 193 7 15 318 21 327 1.60e-54 181
MsG0280010426.01.T01 AT4G21960 32.822 326 204 5 6 318 4 327 2.98e-54 180
MsG0280010426.01.T01 AT2G37130 33.779 299 186 6 28 318 2 296 6.61e-54 178
MsG0280010426.01.T01 AT3G17070 36.452 310 179 9 22 318 35 339 1.05e-53 179
MsG0280010426.01.T01 AT4G25980 41.711 187 105 3 6 192 52 234 2.12e-44 153
MsG0280010426.01.T01 AT5G39580 41.117 197 107 4 29 225 29 216 2.04e-42 147
MsG0280010426.01.T01 AT3G17070 36.604 265 149 10 67 318 18 276 7.07e-41 144
MsG0280010426.01.T01 AT2G24800 39.247 186 107 2 23 206 29 210 1.06e-38 137
MsG0280010426.01.T01 AT3G42570 37.634 93 57 1 101 192 57 149 2.33e-14 69.7
MsG0280010426.01.T01 AT4G35970 27.727 220 104 8 59 267 33 208 2.77e-11 62.8

Find 72 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATATTGTGTTGGAGATTT+TGG 0.083990 2:-69315303 MsG0280010426.01.T01:three_prime_UTR
TGTAACAAATAATTTGTTTA+AGG 0.133122 2:+69317969 None:intergenic
AAAGCAAATTGTCCTCTTTC+TGG 0.146610 2:-69315636 MsG0280010426.01.T01:CDS
TTCTGGTGGTGACACAAATT+TGG 0.219197 2:-69315619 MsG0280010426.01.T01:CDS
AGAGACCTTACAGTCCTTTC+TGG 0.248623 2:-69315750 MsG0280010426.01.T01:CDS
GATGACACTTCCACCTTTAC+CGG 0.277634 2:-69317068 MsG0280010426.01.T01:CDS
TTCTCAATTGTGACCCTGTT+TGG 0.279624 2:-69315143 MsG0280010426.01.T01:three_prime_UTR
TGTTGGTTCTCAAGTTTCTT+TGG 0.288110 2:-69315493 MsG0280010426.01.T01:CDS
GTTCTCAAGTTTCTTTGGTT+AGG 0.293746 2:-69315488 MsG0280010426.01.T01:CDS
TTTCATTGTATATGCGATTT+CGG 0.299036 2:+69315691 None:intergenic
CAGAAGCTGGTGAAGGGATT+TGG 0.309796 2:+69315820 None:intergenic
GGTCATTTCCCTGCGCACTA+TGG 0.317039 2:+69317861 None:intergenic
GGCTTCATTATTGATAGCTT+TGG 0.341495 2:+69317840 None:intergenic
CAAGTTCTTCCATAGAAGTT+AGG 0.346883 2:+69317898 None:intergenic
TTCTCAAGTTTCTTTGGTTA+GGG 0.349477 2:-69315487 MsG0280010426.01.T01:CDS
GTCCTCTCACAGGGACTAAT+GGG 0.352141 2:-69315395 MsG0280010426.01.T01:CDS
AGTCCTCTCACAGGGACTAA+TGG 0.352884 2:-69315396 MsG0280010426.01.T01:CDS
ATGCACTTGTTTATCCAAAC+AGG 0.355381 2:+69315129 None:intergenic
AGGGATCTTGTTGCTAATAA+AGG 0.362589 2:-69315549 MsG0280010426.01.T01:CDS
CCCTGCGCACTATGGTTTGA+AGG 0.370381 2:+69317869 None:intergenic
ATGTGATGGATCAATCTTAT+TGG 0.376187 2:-69317090 MsG0280010426.01.T01:CDS
GTTAGGGCTTATAGTAGAAA+TGG 0.387567 2:-69315471 MsG0280010426.01.T01:CDS
TGAATTAATTGATCATGAAT+TGG 0.390705 2:-69315347 MsG0280010426.01.T01:exon
ATCAATAATGAAGCCCGAAT+TGG 0.393557 2:-69317832 MsG0280010426.01.T01:CDS
GGGAAATTAGAAAGAATTGC+AGG 0.409781 2:-69315374 MsG0280010426.01.T01:CDS
AAGTATAGAAGCACCAATTC+GGG 0.411390 2:+69317819 None:intergenic
GCTACCAATGAGAGAAGTTA+TGG 0.419876 2:+69318030 None:intergenic
GAAGTATAGAAGCACCAATT+CGG 0.422908 2:+69317818 None:intergenic
ATTTCCATAACTTCTCTCAT+TGG 0.424437 2:-69318034 MsG0280010426.01.T01:five_prime_UTR
TAGTTGTTGTCAAAAGTAAC+TGG 0.428640 2:+69315576 None:intergenic
CGCACTATGGTTTGAAGGCT+AGG 0.432460 2:+69317874 None:intergenic
TTTGGATAATTGATTAAGCA+GGG 0.478241 2:-69315285 MsG0280010426.01.T01:three_prime_UTR
GGATAAACAAGTGCATATAT+AGG 0.482901 2:-69315122 MsG0280010426.01.T01:three_prime_UTR
TTGACATTCTGCTTGTCCTA+TGG 0.493917 2:+69315719 None:intergenic
GCCTTCAAACCATAGTGCGC+AGG 0.498639 2:-69317870 MsG0280010426.01.T01:CDS
GTCTTACTTAAATCAATGAA+TGG 0.508065 2:-69315218 MsG0280010426.01.T01:three_prime_UTR
CCCTCATGGGTAGTACCACT+TGG 0.511184 2:-69315885 MsG0280010426.01.T01:CDS
AAGAGACTTTGCTGTTGCTA+TGG 0.520915 2:-69315436 MsG0280010426.01.T01:CDS
CAATTGAATAAATATTGTGT+TGG 0.521150 2:-69315312 MsG0280010426.01.T01:three_prime_UTR
CTAGCACTTGCAACTAGAGA+TGG 0.521717 2:-69316933 MsG0280010426.01.T01:CDS
AATTAATTTATATAGCTTGG+AGG 0.537880 2:-69315909 MsG0280010426.01.T01:intron
TTTGCAAGAAGCTTCAACAC+TGG 0.540754 2:+69316980 None:intergenic
CTTGCATCTCTTCTTCCAAG+TGG 0.553652 2:+69315870 None:intergenic
TGCAAAGTTTGTGTCAATGT+TGG 0.554512 2:+69315668 None:intergenic
TATAGCTTGGAGGACCCTCA+TGG 0.556831 2:-69315899 MsG0280010426.01.T01:intron
AACTAGAGATGGAATAGCAC+TGG 0.557344 2:-69316922 MsG0280010426.01.T01:intron
TTTGTGTCACCACCAGAAAG+AGG 0.559647 2:+69315624 None:intergenic
AGTAGAATTAGTCCTCTCAC+AGG 0.564035 2:-69315405 MsG0280010426.01.T01:CDS
CTTTCTGGTGCACACACCAT+AGG 0.564632 2:-69315735 MsG0280010426.01.T01:CDS
GCACTATGGTTTGAAGGCTA+GGG 0.566432 2:+69317875 None:intergenic
GTGCACCAGAAAGGACTGTA+AGG 0.568848 2:+69315745 None:intergenic
GATAGGTCAGAAGCTGGTGA+AGG 0.571185 2:+69315813 None:intergenic
GCAAATTGTCCTCTTTCTGG+TGG 0.573877 2:-69315633 MsG0280010426.01.T01:CDS
ACTAAAATGTTTCAAAACAA+AGG 0.575966 2:-69315783 MsG0280010426.01.T01:CDS
TGGATAATTGATTAAGCAGG+GGG 0.577614 2:-69315283 MsG0280010426.01.T01:three_prime_UTR
TTAATTGATCATGAATTGGA+GGG 0.580275 2:-69315343 MsG0280010426.01.T01:exon
CCTTCAAACCATAGTGCGCA+GGG 0.588313 2:-69317869 MsG0280010426.01.T01:CDS
ATTAATTGATCATGAATTGG+AGG 0.589702 2:-69315344 MsG0280010426.01.T01:exon
TGCACTTGTTTATCCAAACA+GGG 0.591792 2:+69315130 None:intergenic
TCCCCATTAGTCCCTGTGAG+AGG 0.604797 2:+69315393 None:intergenic
ATAGCTTGGAGGACCCTCAT+GGG 0.605201 2:-69315898 MsG0280010426.01.T01:intron
CCAAGTGGTACTACCCATGA+GGG 0.635598 2:+69315885 None:intergenic
ATAGGTCAGAAGCTGGTGAA+GGG 0.643236 2:+69315814 None:intergenic
AGAGAAGTTATGGAAATGTG+AGG 0.643958 2:+69318040 None:intergenic
TCCAAGTGGTACTACCCATG+AGG 0.651245 2:+69315884 None:intergenic
AGTGTGGATAGGTCAGAAGC+TGG 0.662213 2:+69315807 None:intergenic
CTATGGTGTGTGCACCAGAA+AGG 0.665212 2:+69315736 None:intergenic
AATATCAGCACAAGAGACAG+TGG 0.665482 2:+69316956 None:intergenic
TTGGATAATTGATTAAGCAG+GGG 0.667518 2:-69315284 MsG0280010426.01.T01:three_prime_UTR
GTAGAATTAGTCCTCTCACA+GGG 0.677991 2:-69315404 MsG0280010426.01.T01:CDS
TCCTCTCACAGGGACTAATG+GGG 0.683490 2:-69315394 MsG0280010426.01.T01:CDS
ACTGGAGAGACAGAATCAAG+AGG 0.693800 2:+69315594 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTAAATTTAACATATTA+AGG + Chr2:69316931-69316950 None:intergenic 10.0%
!! TTATGTTTAATTATAAAGAA+TGG + Chr2:69315847-69315866 None:intergenic 10.0%
!! TTATTCTACATTAAATAAAA+TGG - Chr2:69315744-69315763 MsG0280010426.01.T01:CDS 10.0%
!!! AGATATTTTTATATTGAATA+TGG - Chr2:69315159-69315178 MsG0280010426.01.T01:three_prime_UTR 10.0%
!!! TTTTATATTCATTATTGTTA+TGG - Chr2:69317157-69317176 MsG0280010426.01.T01:intron 10.0%
!! AAATATACATGTCTAATAAA+AGG + Chr2:69316280-69316299 None:intergenic 15.0%
!! ATATAAATTAATTGAAACCA+TGG + Chr2:69317238-69317257 None:intergenic 15.0%
!! TTAAAAATAAAACAGTTTAC+AGG - Chr2:69315973-69315992 MsG0280010426.01.T01:intron 15.0%
!! TTCAATTAATTTATATAGCT+TGG - Chr2:69317242-69317261 MsG0280010426.01.T01:intron 15.0%
!! TTGTTCTATTGTTAATTTAT+TGG - Chr2:69315535-69315554 MsG0280010426.01.T01:CDS 15.0%
!!! ATTTCTTTGTTTATTTTGTA+GGG - Chr2:69316041-69316060 MsG0280010426.01.T01:intron 15.0%
!!! TATTTCTTTGTTTATTTTGT+AGG - Chr2:69316040-69316059 MsG0280010426.01.T01:intron 15.0%
!!! TGTAACAAATAATTTGTTTA+AGG + Chr2:69315188-69315207 None:intergenic 15.0%
!! AATTAATTTATATAGCTTGG+AGG - Chr2:69317245-69317264 MsG0280010426.01.T01:intron 20.0%
!! AATTAGACTATTTGATTATG+TGG - Chr2:69315696-69315715 MsG0280010426.01.T01:CDS 20.0%
!! ACTAAAATGTTTCAAAACAA+AGG - Chr2:69317371-69317390 MsG0280010426.01.T01:intron 20.0%
!! ATATAGTTAGGGAAATTTAT+AGG + Chr2:69317054-69317073 None:intergenic 20.0%
!! ATCACTCATTATACTTAAAA+AGG - Chr2:69316584-69316603 MsG0280010426.01.T01:intron 20.0%
!! CAATTGAATAAATATTGTGT+TGG - Chr2:69317842-69317861 MsG0280010426.01.T01:CDS 20.0%
!! TATTATGTTTAGTTAGTAGT+TGG - Chr2:69316721-69316740 MsG0280010426.01.T01:intron 20.0%
!! TGAATTAATTGATCATGAAT+TGG - Chr2:69317807-69317826 MsG0280010426.01.T01:CDS 20.0%
!! TTTAACATATTAAGGGTTTA+TGG + Chr2:69316923-69316942 None:intergenic 20.0%
!! TTTGTGACAAAAGAAATTAA+AGG - Chr2:69316301-69316320 MsG0280010426.01.T01:intron 20.0%
!!! AAATTTGATGACATATAGTT+AGG + Chr2:69317066-69317085 None:intergenic 20.0%
!!! AATTTGATGACATATAGTTA+GGG + Chr2:69317065-69317084 None:intergenic 20.0%
!!! TTTTCCTATCATATTGTTTA+TGG - Chr2:69316428-69316447 MsG0280010426.01.T01:intron 20.0%
!!! TTTTTCTCACATATAATTGA+GGG - Chr2:69316496-69316515 MsG0280010426.01.T01:intron 20.0%
! AAAAAGTTAAGAAGAGAAAG+TGG + Chr2:69316481-69316500 None:intergenic 25.0%
! AATTAAGTGAATTGAGCTTT+AGG - Chr2:69315657-69315676 MsG0280010426.01.T01:CDS 25.0%
! ATTAATTGATCATGAATTGG+AGG - Chr2:69317810-69317829 MsG0280010426.01.T01:CDS 25.0%
! ATTGTAATCATACAATTCTC+TGG - Chr2:69316374-69316393 MsG0280010426.01.T01:intron 25.0%
! GTCTTACTTAAATCAATGAA+TGG - Chr2:69317936-69317955 MsG0280010426.01.T01:CDS 25.0%
! TCACTTAATTATGAAAACTG+TGG + Chr2:69315647-69315666 None:intergenic 25.0%
! TCATGTTTCACATAGAAATA+AGG + Chr2:69317024-69317043 None:intergenic 25.0%
! TTAATTGATCATGAATTGGA+GGG - Chr2:69317811-69317830 MsG0280010426.01.T01:CDS 25.0%
! TTTCATTGTATATGCGATTT+CGG + Chr2:69317466-69317485 None:intergenic 25.0%
! TTTGGATAATTGATTAAGCA+GGG - Chr2:69317869-69317888 MsG0280010426.01.T01:CDS 25.0%
!! AAATATTGTGTTGGAGATTT+TGG - Chr2:69317851-69317870 MsG0280010426.01.T01:CDS 25.0%
!! CTTTTTCTCACATATAATTG+AGG - Chr2:69316495-69316514 MsG0280010426.01.T01:intron 25.0%
!! TTTTGACAACAACTACTATA+GGG - Chr2:69317586-69317605 MsG0280010426.01.T01:intron 25.0%
!! TTTTGGATAATTGATTAAGC+AGG - Chr2:69317868-69317887 MsG0280010426.01.T01:CDS 25.0%
!!! AGCTGGTCTTTTTAATTATT+TGG + Chr2:69316867-69316886 None:intergenic 25.0%
AGTCAACCTTATGTTTACTA+AGG - Chr2:69316655-69316674 MsG0280010426.01.T01:intron 30.0%
ATAATTAAAAAGACCAGCTC+TGG - Chr2:69316868-69316887 MsG0280010426.01.T01:intron 30.0%
ATTTCCATAACTTCTCTCAT+TGG - Chr2:69315120-69315139 MsG0280010426.01.T01:three_prime_UTR 30.0%
CACATAATGAACTACTACAT+TGG - Chr2:69315803-69315822 MsG0280010426.01.T01:CDS 30.0%
GGATAAACAAGTGCATATAT+AGG - Chr2:69318032-69318051 MsG0280010426.01.T01:five_prime_UTR 30.0%
TAACTCTTGTCGTTGTATAT+GGG - Chr2:69316528-69316547 MsG0280010426.01.T01:intron 30.0%
TAATTAAAAAGACCAGCTCT+GGG - Chr2:69316869-69316888 MsG0280010426.01.T01:intron 30.0%
TAGTTGTTGTCAAAAGTAAC+TGG + Chr2:69317581-69317600 None:intergenic 30.0%
TGAATCTCAATAATTCACCA+TGG - Chr2:69317218-69317237 MsG0280010426.01.T01:intron 30.0%
TGATGTCCTTAGTAAACATA+AGG + Chr2:69316664-69316683 None:intergenic 30.0%
TTATCTCTCACATTCTAACT+AGG - Chr2:69315482-69315501 MsG0280010426.01.T01:CDS 30.0%
TTCTCAAGTTTCTTTGGTTA+GGG - Chr2:69317667-69317686 MsG0280010426.01.T01:intron 30.0%
TTGGATAATTGATTAAGCAG+GGG - Chr2:69317870-69317889 MsG0280010426.01.T01:CDS 30.0%
! ATTTTTGTCCATTATCTCAG+AGG + Chr2:69315398-69315417 None:intergenic 30.0%
! CTTTTGACAACAACTACTAT+AGG - Chr2:69317585-69317604 MsG0280010426.01.T01:intron 30.0%
! TTTTTGTCCATTATCTCAGA+GGG + Chr2:69315397-69315416 None:intergenic 30.0%
!! ACTAGGCTCTATTTTTCATT+TGG - Chr2:69315499-69315518 MsG0280010426.01.T01:CDS 30.0%
!! AGGACAATTTGCTTTTCTTA+AGG + Chr2:69317513-69317532 None:intergenic 30.0%
!! ATGTGATGGATCAATCTTAT+TGG - Chr2:69316064-69316083 MsG0280010426.01.T01:intron 30.0%
!! CAACTTTTTCCTAACTTCTA+TGG - Chr2:69315247-69315266 MsG0280010426.01.T01:three_prime_UTR 30.0%
!! CTAGGCTCTATTTTTCATTT+GGG - Chr2:69315500-69315519 MsG0280010426.01.T01:CDS 30.0%
!! TTGAAACATTTTAGTGAGTG+TGG + Chr2:69317366-69317385 None:intergenic 30.0%
!!! GGATAATGCTTGTTTTATGT+TGG - Chr2:69317957-69317976 MsG0280010426.01.T01:CDS 30.0%
!!! TGAACTACTACATTGGTTTT+TGG - Chr2:69315810-69315829 MsG0280010426.01.T01:CDS 30.0%
!!! TTTATTTTGTAGGGATGTGA+TGG - Chr2:69316050-69316069 MsG0280010426.01.T01:intron 30.0%
AAAGCAAATTGTCCTCTTTC+TGG - Chr2:69317518-69317537 MsG0280010426.01.T01:intron 35.0%
AACTCTTGTCGTTGTATATG+GGG - Chr2:69316529-69316548 MsG0280010426.01.T01:intron 35.0%
AAGTTAAGAAGAGAAAGTGG+CGG + Chr2:69316478-69316497 None:intergenic 35.0%
ACCTAACAAAAACTCAGCTA+GGG - Chr2:69316124-69316143 MsG0280010426.01.T01:intron 35.0%
AGAGAAGTTATGGAAATGTG+AGG + Chr2:69315117-69315136 None:intergenic 35.0%
AGGGATCTTGTTGCTAATAA+AGG - Chr2:69317605-69317624 MsG0280010426.01.T01:intron 35.0%
ATCAATAATGAAGCCCGAAT+TGG - Chr2:69315322-69315341 MsG0280010426.01.T01:three_prime_UTR 35.0%
ATGCACTTGTTTATCCAAAC+AGG + Chr2:69318028-69318047 None:intergenic 35.0%
CAACAAAAAATTCGAGAGCA+CGG - Chr2:69316614-69316633 MsG0280010426.01.T01:intron 35.0%
CAAGTTCTTCCATAGAAGTT+AGG + Chr2:69315259-69315278 None:intergenic 35.0%
CGTGCCATAAACAATATGAT+AGG + Chr2:69316435-69316454 None:intergenic 35.0%
CTAACTCTTGTCGTTGTATA+TGG - Chr2:69316527-69316546 MsG0280010426.01.T01:intron 35.0%
GGGAAATTAGAAAGAATTGC+AGG - Chr2:69317780-69317799 MsG0280010426.01.T01:intron 35.0%
GTTAGGAAAAAGTTGTGCAT+TGG + Chr2:69315242-69315261 None:intergenic 35.0%
GTTAGGGCTTATAGTAGAAA+TGG - Chr2:69317683-69317702 MsG0280010426.01.T01:intron 35.0%
GTTCTCAAGTTTCTTTGGTT+AGG - Chr2:69317666-69317685 MsG0280010426.01.T01:intron 35.0%
TGCAAAGTTTGTGTCAATGT+TGG + Chr2:69317489-69317508 None:intergenic 35.0%
TGCACTTGTTTATCCAAACA+GGG + Chr2:69318027-69318046 None:intergenic 35.0%
TGGATAATTGATTAAGCAGG+GGG - Chr2:69317871-69317890 MsG0280010426.01.T01:CDS 35.0%
! GGCTTCATTATTGATAGCTT+TGG + Chr2:69315317-69315336 None:intergenic 35.0%
! TCTGATCAAGCTCTTTTCAA+TGG - Chr2:69317638-69317657 MsG0280010426.01.T01:intron 35.0%
!! AAGTATAGAAGCACCAATTC+GGG + Chr2:69315338-69315357 None:intergenic 35.0%
!! ACATTTTAGTGAGTGTGGAT+AGG + Chr2:69317361-69317380 None:intergenic 35.0%
!! GAAGTATAGAAGCACCAATT+CGG + Chr2:69315339-69315358 None:intergenic 35.0%
!! TGTTGGTTCTCAAGTTTCTT+TGG - Chr2:69317661-69317680 MsG0280010426.01.T01:intron 35.0%
!!! AGCTTCAACACTGGTTTTAA+TGG + Chr2:69316168-69316187 None:intergenic 35.0%
AACTAGAGATGGAATAGCAC+TGG - Chr2:69316232-69316251 MsG0280010426.01.T01:intron 40.0%
AATATCAGCACAAGAGACAG+TGG + Chr2:69316201-69316220 None:intergenic 40.0%
AGTAGAATTAGTCCTCTCAC+AGG - Chr2:69317749-69317768 MsG0280010426.01.T01:intron 40.0%
CACCTAACAAAAACTCAGCT+AGG - Chr2:69316123-69316142 MsG0280010426.01.T01:intron 40.0%
CCTAACAAAAACTCAGCTAG+GGG - Chr2:69316125-69316144 MsG0280010426.01.T01:intron 40.0%
GCTACCAATGAGAGAAGTTA+TGG + Chr2:69315127-69315146 None:intergenic 40.0%
GTAGAATTAGTCCTCTCACA+GGG - Chr2:69317750-69317769 MsG0280010426.01.T01:intron 40.0%
TTCTCAATTGTGACCCTGTT+TGG - Chr2:69318011-69318030 MsG0280010426.01.T01:five_prime_UTR 40.0%
TTCTCTGGTCATTCTCAAGA+TGG - Chr2:69316389-69316408 MsG0280010426.01.T01:intron 40.0%
TTGACATTCTGCTTGTCCTA+TGG + Chr2:69317438-69317457 None:intergenic 40.0%
TTTGCAAGAAGCTTCAACAC+TGG + Chr2:69316177-69316196 None:intergenic 40.0%
! AGCTGAGTTTTTGTTAGGTG+CGG + Chr2:69316123-69316142 None:intergenic 40.0%
! ATTTTTCTCACCGGTAAAGG+TGG + Chr2:69316099-69316118 None:intergenic 40.0%
! CAAGCTCTTTTCAATGGTGT+TGG - Chr2:69317644-69317663 MsG0280010426.01.T01:intron 40.0%
! TTCTGGTGGTGACACAAATT+TGG - Chr2:69317535-69317554 MsG0280010426.01.T01:intron 40.0%
!! AAGAGACTTTGCTGTTGCTA+TGG - Chr2:69317718-69317737 MsG0280010426.01.T01:intron 40.0%
!! TGTAAGTCCCTCTGAGATAA+TGG - Chr2:69315387-69315406 MsG0280010426.01.T01:CDS 40.0%
ACTGGAGAGACAGAATCAAG+AGG + Chr2:69317563-69317582 None:intergenic 45.0%
AGAGACCTTACAGTCCTTTC+TGG - Chr2:69317404-69317423 MsG0280010426.01.T01:intron 45.0%
ATAGGTCAGAAGCTGGTGAA+GGG + Chr2:69317343-69317362 None:intergenic 45.0%
CTAGCACTTGCAACTAGAGA+TGG - Chr2:69316221-69316240 MsG0280010426.01.T01:intron 45.0%
CTTGCATCTCTTCTTCCAAG+TGG + Chr2:69317287-69317306 None:intergenic 45.0%
GATGACACTTCCACCTTTAC+CGG - Chr2:69316086-69316105 MsG0280010426.01.T01:intron 45.0%
GCAAATTGTCCTCTTTCTGG+TGG - Chr2:69317521-69317540 MsG0280010426.01.T01:intron 45.0%
GCACTATGGTTTGAAGGCTA+GGG + Chr2:69315282-69315301 None:intergenic 45.0%
TTTGATACTCAACCCAGAGC+TGG + Chr2:69316884-69316903 None:intergenic 45.0%
TTTGTGTCACCACCAGAAAG+AGG + Chr2:69317533-69317552 None:intergenic 45.0%
! CCCCTAGCTGAGTTTTTGTT+AGG + Chr2:69316128-69316147 None:intergenic 45.0%
! GCTCTGGGTTGAGTATCAAA+TGG - Chr2:69316884-69316903 MsG0280010426.01.T01:intron 45.0%
! GGCATTTTTCTCACCGGTAA+AGG + Chr2:69316102-69316121 None:intergenic 45.0%
!! AATTAAATTTAACATATTAA+GGG + Chr2:69316930-69316949 None:intergenic 5.0%
!!! ATATATTTATCTTTTTTTTA+AGG + Chr2:69315902-69315921 None:intergenic 5.0%
AGTCCTCTCACAGGGACTAA+TGG - Chr2:69317758-69317777 MsG0280010426.01.T01:intron 50.0%
AGTGTGGATAGGTCAGAAGC+TGG + Chr2:69317350-69317369 None:intergenic 50.0%
ATAGCTTGGAGGACCCTCAT+GGG - Chr2:69317256-69317275 MsG0280010426.01.T01:intron 50.0%
CAGAAGCTGGTGAAGGGATT+TGG + Chr2:69317337-69317356 None:intergenic 50.0%
CCAAGTGGTACTACCCATGA+GGG + Chr2:69317272-69317291 None:intergenic 50.0%
CCTTCAAACCATAGTGCGCA+GGG - Chr2:69315285-69315304 MsG0280010426.01.T01:three_prime_UTR 50.0%
CGCACTATGGTTTGAAGGCT+AGG + Chr2:69315283-69315302 None:intergenic 50.0%
CTATGGTGTGTGCACCAGAA+AGG + Chr2:69317421-69317440 None:intergenic 50.0%
GATAGGTCAGAAGCTGGTGA+AGG + Chr2:69317344-69317363 None:intergenic 50.0%
GCAGGGGGTCTAAGTCATAA+AGG - Chr2:69317886-69317905 MsG0280010426.01.T01:CDS 50.0%
GTCCTCTCACAGGGACTAAT+GGG - Chr2:69317759-69317778 MsG0280010426.01.T01:intron 50.0%
GTGCACCAGAAAGGACTGTA+AGG + Chr2:69317412-69317431 None:intergenic 50.0%
TATAGCTTGGAGGACCCTCA+TGG - Chr2:69317255-69317274 MsG0280010426.01.T01:intron 50.0%
TCCAAGTGGTACTACCCATG+AGG + Chr2:69317273-69317292 None:intergenic 50.0%
TCCTCTCACAGGGACTAATG+GGG - Chr2:69317760-69317779 MsG0280010426.01.T01:intron 50.0%
! AGGTGCGGCATTTTTCTCAC+CGG + Chr2:69316108-69316127 None:intergenic 50.0%
! CTTTCTGGTGCACACACCAT+AGG - Chr2:69317419-69317438 MsG0280010426.01.T01:intron 50.0%
!! AGAAAGTGGCGGACATGGTT+TGG + Chr2:69316467-69316486 None:intergenic 50.0%
!! AGAAGAGAAAGTGGCGGACA+TGG + Chr2:69316472-69316491 None:intergenic 50.0%
CCCTCATGGGTAGTACCACT+TGG - Chr2:69317269-69317288 MsG0280010426.01.T01:intron 55.0%
CCCTGCGCACTATGGTTTGA+AGG + Chr2:69315288-69315307 None:intergenic 55.0%
GCCTTCAAACCATAGTGCGC+AGG - Chr2:69315284-69315303 MsG0280010426.01.T01:three_prime_UTR 55.0%
GGTCATTTCCCTGCGCACTA+TGG + Chr2:69315296-69315315 None:intergenic 55.0%
TCCCCATTAGTCCCTGTGAG+AGG + Chr2:69317764-69317783 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 69315112 69318064 69315112 ID=MsG0280010426.01;Name=MsG0280010426.01
Chr2 mRNA 69315112 69318064 69315112 ID=MsG0280010426.01.T01;Parent=MsG0280010426.01;Name=MsG0280010426.01.T01;_AED=0.49;_eAED=0.49;_QI=66|1|1|1|1|1|3|250|318
Chr2 exon 69315112 69315916 69315112 ID=MsG0280010426.01.T01:exon:26734;Parent=MsG0280010426.01.T01
Chr2 exon 69316923 69317114 69316923 ID=MsG0280010426.01.T01:exon:26733;Parent=MsG0280010426.01.T01
Chr2 exon 69317789 69318064 69317789 ID=MsG0280010426.01.T01:exon:26732;Parent=MsG0280010426.01.T01
Chr2 five_prime_UTR 69317999 69318064 69317999 ID=MsG0280010426.01.T01:five_prime_utr;Parent=MsG0280010426.01.T01
Chr2 CDS 69317789 69317998 69317789 ID=MsG0280010426.01.T01:cds;Parent=MsG0280010426.01.T01
Chr2 CDS 69316923 69317114 69316923 ID=MsG0280010426.01.T01:cds;Parent=MsG0280010426.01.T01
Chr2 CDS 69315362 69315916 69315362 ID=MsG0280010426.01.T01:cds;Parent=MsG0280010426.01.T01
Chr2 three_prime_UTR 69315112 69315361 69315112 ID=MsG0280010426.01.T01:three_prime_utr;Parent=MsG0280010426.01.T01
Gene Sequence

>MsG0280010426.01.T01

ATGGTGACCTTAAACAAATTATTTGTTACACTCTCTATTCTTTCTATCTTTGCTTGTTCTACCAATGCACAACTTTTTCCTAACTTCTATGGAAGAACTTGCCCTAGCCTTCAAACCATAGTGCGCAGGGAAATGACCAAAGCTATCAATAATGAAGCCCGAATTGGTGCTTCTATACTTCGTTTGTTCTTTCATGACTGCTTTGTAAATGGATGTGATGGATCAATCTTATTGGATGACACTTCCACCTTTACCGGTGAGAAAAATGCCGCACCTAACAAAAACTCAGCTAGGGGTTTTGAAGTGATTGATACCATTAAAACCAGTGTTGAAGCTTCTTGCAAAGCCACTGTCTCTTGTGCTGATATTCTAGCACTTGCAACTAGAGATGGAATAGCACTGCTTGGAGGACCCTCATGGGTAGTACCACTTGGAAGAAGAGATGCAAGAACAGCAAGTCAAAGTGCAGCAAACAGCCAAATCCCTTCACCAGCTTCTGACCTATCCACACTCACTAAAATGTTTCAAAACAAAGGTCTAACATTAAGAGACCTTACAGTCCTTTCTGGTGCACACACCATAGGACAAGCAGAATGTCAATTTTTCCGAAATCGCATATACAATGAAACCAACATTGACACAAACTTTGCAACCTTAAGAAAAGCAAATTGTCCTCTTTCTGGTGGTGACACAAATTTGGCACCTCTTGATTCTGTCTCTCCAGTTACTTTTGACAACAACTACTATAGGGATCTTGTTGCTAATAAAGGACTTCTTCATTCTGATCAAGCTCTTTTCAATGGTGTTGGTTCTCAAGTTTCTTTGGTTAGGGCTTATAGTAGAAATGGTTTTGCTTTTAGAAGAGACTTTGCTGTTGCTATGGTGAAGATGAGTAGAATTAGTCCTCTCACAGGGACTAATGGGGAAATTAGAAAGAATTGCAGGCTTGTGAATTAA
Protein sequence

>MsG0280010426.01.T01

MVTLNKLFVTLSILSIFACSTNAQLFPNFYGRTCPSLQTIVRREMTKAINNEARIGASILRLFFHDCFVNGCDGSILLDDTSTFTGEKNAAPNKNSARGFEVIDTIKTSVEASCKATVSCADILALATRDGIALLGGPSWVVPLGRRDARTASQSAANSQIPSPASDLSTLTKMFQNKGLTLRDLTVLSGAHTIGQAECQFFRNRIYNETNIDTNFATLRKANCPLSGGDTNLAPLDSVSPVTFDNNYYRDLVANKGLLHSDQALFNGVGSQVSLVRAYSRNGFAFRRDFAVAMVKMSRISPLTGTNGEIRKNCRLVN*