AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022598.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022598.01.T02 MTR_4g092900 100.000 183 0 0 1 183 351 533 7.38e-127 367
MsG0480022598.01.T02 MTR_4g092900 100.000 164 0 0 1 164 351 514 1.98e-113 332
MsG0480022598.01.T02 MTR_4g092880 91.018 167 12 2 18 183 346 510 1.47e-81 250
MsG0480022598.01.T02 MTR_2g091130 62.667 75 28 0 1 75 475 549 6.19e-25 101
MsG0480022598.01.T02 MTR_2g091135 58.667 75 31 0 1 75 486 560 1.65e-22 94.4
MsG0480022598.01.T02 MTR_2g091135 58.667 75 31 0 1 75 486 560 1.78e-22 94.0
MsG0480022598.01.T02 MTR_2g033390 88.571 35 4 0 113 147 410 444 9.84e-14 68.9
MsG0480022598.01.T01 MTR_4g092900 100.000 183 0 0 1 183 351 533 7.38e-127 367
MsG0480022598.01.T01 MTR_4g092900 100.000 164 0 0 1 164 351 514 1.98e-113 332
MsG0480022598.01.T01 MTR_4g092880 91.018 167 12 2 18 183 346 510 1.47e-81 250
MsG0480022598.01.T01 MTR_2g091130 62.667 75 28 0 1 75 475 549 6.19e-25 101
MsG0480022598.01.T01 MTR_2g091135 58.667 75 31 0 1 75 486 560 1.65e-22 94.4
MsG0480022598.01.T01 MTR_2g091135 58.667 75 31 0 1 75 486 560 1.78e-22 94.0
MsG0480022598.01.T01 MTR_2g033390 88.571 35 4 0 113 147 410 444 9.84e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022598.01.T02 AT5G65630 56.934 137 51 1 1 137 404 532 4.47e-43 151
MsG0480022598.01.T02 AT5G10550 50.735 136 60 1 1 136 399 527 2.75e-36 132
MsG0480022598.01.T02 AT1G06230 54.688 64 29 0 1 64 607 670 1.85e-16 77.0
MsG0480022598.01.T02 AT1G06230 54.688 64 29 0 1 64 607 670 1.85e-16 77.0
MsG0480022598.01.T02 AT1G06230 54.688 64 29 0 1 64 607 670 1.85e-16 77.0
MsG0480022598.01.T02 AT1G06230 54.688 64 29 0 1 64 607 670 1.85e-16 77.0
MsG0480022598.01.T02 AT1G73150 50.000 78 39 0 1 78 308 385 9.06e-16 74.7
MsG0480022598.01.T02 AT1G17790 52.857 70 33 0 1 70 330 399 1.12e-15 74.3
MsG0480022598.01.T01 AT5G65630 56.934 137 51 1 1 137 404 532 4.47e-43 151
MsG0480022598.01.T01 AT5G10550 50.735 136 60 1 1 136 399 527 2.75e-36 132
MsG0480022598.01.T01 AT1G06230 54.688 64 29 0 1 64 607 670 1.85e-16 77.0
MsG0480022598.01.T01 AT1G06230 54.688 64 29 0 1 64 607 670 1.85e-16 77.0
MsG0480022598.01.T01 AT1G06230 54.688 64 29 0 1 64 607 670 1.85e-16 77.0
MsG0480022598.01.T01 AT1G06230 54.688 64 29 0 1 64 607 670 1.85e-16 77.0
MsG0480022598.01.T01 AT1G73150 50.000 78 39 0 1 78 308 385 9.06e-16 74.7
MsG0480022598.01.T01 AT1G17790 52.857 70 33 0 1 70 330 399 1.12e-15 74.3

Find 144 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTCATTTCCCTCTTATT+TGG 0.124253 4:-74530056 None:intergenic
CTTTGGCTTGGGCTGCTTCA+AGG 0.184318 4:-74530024 None:intergenic
TTCAAAGCCGTTGCATTTAC+AGG 0.229221 4:-74529536 None:intergenic
CCTCTGTGTTGCAGCCAATT+TGG 0.258953 4:-74529056 None:intergenic
ACCCTCTCCCTTTCCCTCTC+TGG 0.292850 4:-74529838 None:intergenic
TTGTTACTAAATTTAGGGTT+AGG 0.292960 4:-74529113 None:intergenic
TCAGGGAGCAAGAAGGTTTC+CGG 0.305508 4:+74529368 MsG0480022598.01.T01:five_prime_UTR
GGATCCCTGGCCTTTGGCTT+GGG 0.322222 4:-74530035 None:intergenic
TTCCCTCTTATTTGGATCCC+TGG 0.326630 4:-74530048 None:intergenic
TGGATCCCTGGCCTTTGGCT+TGG 0.328127 4:-74530036 None:intergenic
TTTGGCTTGGGCTGCTTCAA+GGG 0.331789 4:-74530023 None:intergenic
CAGGCTCAGGCAGTGGGTCT+TGG 0.335378 4:-74529909 None:intergenic
TTATTTGGATCCCTGGCCTT+TGG 0.344705 4:-74530041 None:intergenic
ACCCCATTGCCTTTGTTTGA+AGG 0.345351 4:-74530317 None:intergenic
GGCTGCTTCAAGGGCTTCAC+TGG 0.348486 4:-74530014 None:intergenic
ACCACCGTTGTGGTTTAGCC+TGG 0.356873 4:-74529330 None:intergenic
ACCGGTGGAGGGATTGGAAT+TGG 0.357465 4:-74529877 None:intergenic
CTGTTGACACGGAGACTCTC+TGG 0.367522 4:+74530213 MsG0480022598.01.T01:CDS
CCAACGGTAACGAACCAAAT+TGG 0.367917 4:+74529042 MsG0480022598.01.T01:five_prime_UTR
GAGTCTTAAGATGACGAATT+TGG 0.370641 4:-74529283 None:intergenic
AATTAAGCATCCTATGGATC+TGG 0.371201 4:+74529580 MsG0480022598.01.T01:five_prime_UTR
CGAACTGGTGACTGAGCTAA+TGG 0.371584 4:-74529967 None:intergenic
AAAGAGGAAAAGAGAGTGTA+AGG 0.371897 4:-74528825 None:intergenic
GATTAAGCGGCAGGCGCTAA+TGG 0.380098 4:+74530280 MsG0480022598.01.T01:CDS
AAGAAATCAAAGTCAGAGAT+TGG 0.382024 4:+74529425 MsG0480022598.01.T01:five_prime_UTR
AGAGTGTAAGGGTTTGGAAT+TGG 0.386382 4:-74528813 None:intergenic
TCATCAAATTTCTCGTGTAT+TGG 0.386676 4:-74529767 None:intergenic
CTTGCTCCCTGATTTCTTAG+TGG 0.395685 4:-74529357 None:intergenic
TTGCTCCCTGATTTCTTAGT+GGG 0.400065 4:-74529356 None:intergenic
GAAAAGAGAGTGTAAGGGTT+TGG 0.406320 4:-74528819 None:intergenic
GGTGGTCCCACTAAGAAATC+AGG 0.406385 4:+74529350 MsG0480022598.01.T01:five_prime_UTR
TTTGCTACCGGTGGAGGGAT+TGG 0.415792 4:-74529883 None:intergenic
CTTAAGACTCGAATTGAATC+AGG 0.417831 4:+74529296 MsG0480022598.01.T01:five_prime_UTR
TGGAATCCCTACGCGCCGTT+TGG 0.419052 4:-74528889 None:intergenic
TGCCTTCAAACAAAGGCAAT+GGG 0.422340 4:+74530315 MsG0480022598.01.T01:CDS
AGGAAAAGGTCGTTTGTTGC+CGG 0.425299 4:-74529387 None:intergenic
AAGGAAGAGAAATGGGCATT+TGG 0.428825 4:+74530154 MsG0480022598.01.T01:CDS
CTAAATTTAGGGTTAGGGTT+AGG 0.433996 4:-74529107 None:intergenic
AGAAATCAAAGTCAGAGATT+GGG 0.434900 4:+74529426 MsG0480022598.01.T01:five_prime_UTR
TCACTGGAAGTGCTCGCGTT+GGG 0.435457 4:-74529998 None:intergenic
GGATGAGATTGAGCTTGATA+TGG 0.436408 4:+74530187 MsG0480022598.01.T01:CDS
TCGATCGATTGGTTACCAAT+TGG 0.445939 4:+74530240 MsG0480022598.01.T01:CDS
TGTTACTAAATTTAGGGTTA+GGG 0.446081 4:-74529112 None:intergenic
AGGCGGTGGAGCTGAATTCA+TGG 0.450284 4:+74529076 MsG0480022598.01.T01:five_prime_UTR
TGATATAATTAAGCATCCTA+TGG 0.454884 4:+74529574 MsG0480022598.01.T01:five_prime_UTR
ATGGGCATTTGGAGCAAGAT+GGG 0.463782 4:+74530165 MsG0480022598.01.T01:CDS
TTCCACCTGCGCGTGATCGT+TGG 0.467491 4:+74528907 MsG0480022598.01.T01:five_prime_UTR
AATTCCCTCACCGCAGGAAA+AGG 0.468461 4:-74529401 None:intergenic
AACAGGTAGTGCAGATCATA+AGG 0.470734 4:+74530135 MsG0480022598.01.T01:CDS
CGTTGGGAGGGTATGCGAAC+TGG 0.473679 4:-74529982 None:intergenic
TTCACTGGAAGTGCTCGCGT+TGG 0.478335 4:-74529999 None:intergenic
AGCAGCCCAAGCCAAAGGCC+AGG 0.478818 4:+74530030 MsG0480022598.01.T01:five_prime_UTR
ACTACCTGTTCCATCTTCTC+TGG 0.479486 4:-74530122 None:intergenic
GTGTTAACATCATGGCCCTT+GGG 0.480899 4:-74529701 None:intergenic
AGGCCAGGGATCCAAATAAG+AGG 0.482051 4:+74530045 MsG0480022598.01.T01:five_prime_UTR
GGGGATTCGAAGTGCTTGGC+TGG 0.485173 4:-74529945 None:intergenic
CCAATTTGGTTCGTTACCGT+TGG 0.486429 4:-74529042 None:intergenic
CTGGAAGTGCTCGCGTTGGG+AGG 0.487170 4:-74529995 None:intergenic
GTACTAGCAGGCTCAGGCAG+TGG 0.488980 4:-74529916 None:intergenic
AGAGATTGGGGATGCGATGA+AGG 0.491863 4:+74529439 MsG0480022598.01.T01:five_prime_UTR
CAGATCATAAGGAAGAGAAA+TGG 0.492121 4:+74530146 MsG0480022598.01.T01:CDS
GTGAGACTCCGGCGTATCTC+CGG 0.492908 4:-74528975 None:intergenic
GCCACCAGAGAAGATGGAAC+AGG 0.495605 4:+74530118 MsG0480022598.01.T01:CDS
AGATCATAAGGAAGAGAAAT+GGG 0.498119 4:+74530147 MsG0480022598.01.T01:CDS
GCAGCCCAAGCCAAAGGCCA+GGG 0.500330 4:+74530031 MsG0480022598.01.T01:five_prime_UTR
AGTGTTAACATCATGGCCCT+TGG 0.504161 4:-74529702 None:intergenic
TACTAGCAGGCTCAGGCAGT+GGG 0.504638 4:-74529915 None:intergenic
GTTGGATCGTCGATTGATTG+AGG 0.506931 4:-74529168 None:intergenic
TTTCCCTCTCTGGTTCAACA+TGG 0.510397 4:-74529828 None:intergenic
ATGTTGAACCAGAGAGGGAA+AGG 0.513945 4:+74529830 MsG0480022598.01.T01:five_prime_UTR
AACCAGAGAGGGAAAGGGAG+AGG 0.515203 4:+74529836 MsG0480022598.01.T01:five_prime_UTR
GGTGAGCAAGATTAAGCGGC+AGG 0.516928 4:+74530271 MsG0480022598.01.T01:CDS
TTCTTCAATTCCCTCACCGC+AGG 0.519424 4:-74529407 None:intergenic
ATCGCAAAATCACGGCTGGC+CGG 0.521386 4:-74528997 None:intergenic
AATGGGCATTTGGAGCAAGA+TGG 0.522107 4:+74530164 MsG0480022598.01.T01:CDS
ATTGAGGAAGCGTCATCTGA+TGG 0.524535 4:-74529152 None:intergenic
TGGCTGCAACACAGAGGCGG+TGG 0.525481 4:+74529062 MsG0480022598.01.T01:five_prime_UTR
GTGCCTTCAAACAAAGGCAA+TGG 0.528594 4:+74530314 MsG0480022598.01.T01:CDS
CCACCGTTGTGGTTTAGCCT+GGG 0.530502 4:-74529329 None:intergenic
TTGAGGAAGCGTCATCTGAT+GGG 0.538515 4:-74529151 None:intergenic
ATTAAGCATCCTATGGATCT+GGG 0.539150 4:+74529581 MsG0480022598.01.T01:five_prime_UTR
TAAAATCGCAAAATCACGGC+TGG 0.539184 4:-74529001 None:intergenic
GAACTGGTGACTGAGCTAAT+GGG 0.540318 4:-74529966 None:intergenic
ACGGCTGGCCGGTGAGACTC+CGG 0.540856 4:-74528986 None:intergenic
TTAGAAGTACTAGCAGGCTC+AGG 0.542104 4:-74529922 None:intergenic
GTATTGTGAATGATTATCGT+TGG 0.542418 4:-74529186 None:intergenic
AACCAACGATCACGCGCAGG+TGG 0.549472 4:-74528909 None:intergenic
GAAATCAAAGTCAGAGATTG+GGG 0.550032 4:+74529427 MsG0480022598.01.T01:five_prime_UTR
ACCTGTTCCATCTTCTCTGG+TGG 0.552351 4:-74530119 None:intergenic
TGGAAGTGCTCGCGTTGGGA+GGG 0.552470 4:-74529994 None:intergenic
TAGTATTGGTAGCTCTAAAG+AGG 0.554360 4:-74528841 None:intergenic
AATAATGTGCCTTCAAACAA+AGG 0.557916 4:+74530308 MsG0480022598.01.T01:CDS
AAGAGGAAAAGAGAGTGTAA+GGG 0.559339 4:-74528824 None:intergenic
GGCTGGTTAGAAGTACTAGC+AGG 0.564980 4:-74529928 None:intergenic
ATTTCATGCCGGAGATACGC+CGG 0.565242 4:+74528967 MsG0480022598.01.T01:five_prime_UTR
GAGATACGCCGGAGTCTCAC+CGG 0.565508 4:+74528978 MsG0480022598.01.T01:five_prime_UTR
TGTTGACACGGAGACTCTCT+GGG 0.565659 4:+74530214 MsG0480022598.01.T01:CDS
TGTTGAACCAGAGAGGGAAA+GGG 0.566133 4:+74529831 MsG0480022598.01.T01:five_prime_UTR
GGCGGTGGAGCTGAATTCAT+GGG 0.566531 4:+74529077 MsG0480022598.01.T01:five_prime_UTR
CTTGAAGCAGCCCAAGCCAA+AGG 0.568683 4:+74530025 MsG0480022598.01.T01:five_prime_UTR
ACCAGAGAGGGAAAGGGAGA+GGG 0.569026 4:+74529837 MsG0480022598.01.T01:five_prime_UTR
TCCAATTCCAATCCCTCCAC+CGG 0.570278 4:+74529876 MsG0480022598.01.T01:five_prime_UTR
TCTCTGGGAACTCGATCGAT+TGG 0.573945 4:+74530229 MsG0480022598.01.T01:CDS
GCCATAAAATCGCAAAATCA+CGG 0.574801 4:-74529005 None:intergenic
TCGCCGCAGTGTTAACATCA+TGG 0.579958 4:-74529709 None:intergenic
ATGAATTACAGGCTAGCTCG+TGG 0.582142 4:+74529803 MsG0480022598.01.T01:five_prime_UTR
CATCGAATCGTACACAAAGA+CGG 0.584140 4:+74529220 MsG0480022598.01.T01:five_prime_UTR
TAGTGGGACCACCACCGTTG+TGG 0.584586 4:-74529340 None:intergenic
AACTGGTGACTGAGCTAATG+GGG 0.588096 4:-74529965 None:intergenic
TGCATTGACATACAATCCCA+AGG 0.588241 4:+74529685 MsG0480022598.01.T01:five_prime_UTR
AGGCTAAACCACAACGGTGG+TGG 0.594359 4:+74529332 MsG0480022598.01.T01:five_prime_UTR
TTGACAGTACCCAGATCCAT+AGG 0.596367 4:-74529590 None:intergenic
GAAAACTCACGCGCTTCCGT+CGG 0.596581 4:-74528867 None:intergenic
CCACATTGAGAATTTCATGC+CGG 0.605404 4:+74528956 MsG0480022598.01.T01:five_prime_UTR
TAACACTCCTGTAAATGCAA+CGG 0.607221 4:+74529529 MsG0480022598.01.T01:five_prime_UTR
GGCCAGGGATCCAAATAAGA+GGG 0.609397 4:+74530046 MsG0480022598.01.T01:five_prime_UTR
GAACCATGTTGAACCAGAGA+GGG 0.610145 4:+74529825 MsG0480022598.01.T01:five_prime_UTR
GTGGTCCCACTAAGAAATCA+GGG 0.612863 4:+74529351 MsG0480022598.01.T01:five_prime_UTR
TAAGAGGGAAATGAATGTTG+AGG 0.616464 4:+74530061 MsG0480022598.01.T01:exon
TGATATGGAGGCTGTTGACA+CGG 0.617215 4:+74530202 MsG0480022598.01.T01:CDS
ACATCAGCAGCAAAATCCGC+CGG 0.619449 4:-74529644 None:intergenic
ATAAACCAACGATCACGCGC+AGG 0.620864 4:-74528912 None:intergenic
TGAGGAAGCGTCATCTGATG+GGG 0.626247 4:-74529150 None:intergenic
AGATGGTGAGCAAGATTAAG+CGG 0.630774 4:+74530267 MsG0480022598.01.T01:CDS
TAAGAAATCAGGGAGCAAGA+AGG 0.642181 4:+74529361 MsG0480022598.01.T01:five_prime_UTR
GCTACCAATACTATCTCCGA+CGG 0.644800 4:+74528851 MsG0480022598.01.T01:five_prime_UTR
GCTTCCGTCGGAGATAGTAT+TGG 0.651364 4:-74528855 None:intergenic
TGGGCATTTGGAGCAAGATG+GGG 0.655326 4:+74530166 MsG0480022598.01.T01:CDS
TGAGATTGAGCTTGATATGG+AGG 0.664012 4:+74530190 MsG0480022598.01.T01:CDS
GCATCGGCGTTATTAGCCAA+CGG 0.665865 4:+74529026 MsG0480022598.01.T01:five_prime_UTR
GGAACCATGTTGAACCAGAG+AGG 0.667661 4:+74529824 MsG0480022598.01.T01:five_prime_UTR
GGGGATGCGATGAAGGCTTG+TGG 0.668675 4:+74529446 MsG0480022598.01.T01:five_prime_UTR
TAAGAATGCTTACTCTACGC+CGG 0.674848 4:+74529625 MsG0480022598.01.T01:five_prime_UTR
CCGGCATGAAATTCTCAATG+TGG 0.675384 4:-74528956 None:intergenic
GCATTGACATACAATCCCAA+GGG 0.679665 4:+74529686 MsG0480022598.01.T01:five_prime_UTR
AATTGGCTGCAACACAGAGG+CGG 0.689298 4:+74529059 MsG0480022598.01.T01:five_prime_UTR
AATCAGGTGAGTTTAAACCC+AGG 0.697049 4:+74529312 MsG0480022598.01.T01:five_prime_UTR
GCCTTCAAACAAAGGCAATG+GGG 0.698333 4:+74530316 MsG0480022598.01.T01:CDS
ACTGGTGACTGAGCTAATGG+GGG 0.699815 4:-74529964 None:intergenic
GAATGCTTACTCTACGCCGG+CGG 0.711544 4:+74529628 MsG0480022598.01.T01:five_prime_UTR
CCCAGGCTAAACCACAACGG+TGG 0.730798 4:+74529329 MsG0480022598.01.T01:five_prime_UTR
CCAAATTGGCTGCAACACAG+AGG 0.734243 4:+74529056 MsG0480022598.01.T01:five_prime_UTR
AAACCCAGGCTAAACCACAA+CGG 0.749218 4:+74529326 MsG0480022598.01.T01:five_prime_UTR
GGGCCATGATGTTAACACTG+CGG 0.770423 4:+74529706 MsG0480022598.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTTTGTTACTAAATTTA+GGG - Chr4:74529121-74529140 None:intergenic 15.0%
!! ATTGAGAAAGATAAAGATAT+GGG + Chr4:74530577-74530596 MsG0480022598.01.T01:CDS 20.0%
!!! CTCTTTTTGTTACTAAATTT+AGG - Chr4:74529122-74529141 None:intergenic 20.0%
! ATCACTCAACAGAATAAAAA+TGG - Chr4:74530357-74530376 None:intergenic 25.0%
! CAGAATAAAAATGGACAATA+AGG - Chr4:74530348-74530367 None:intergenic 25.0%
! GATTGAGAAAGATAAAGATA+TGG + Chr4:74530576-74530595 MsG0480022598.01.T01:CDS 25.0%
! TGATATAATTAAGCATCCTA+TGG + Chr4:74529574-74529593 MsG0480022598.01.T01:five_prime_UTR 25.0%
!! ATTTTCTTGTGTGCATTTAT+AGG + Chr4:74530423-74530442 MsG0480022598.01.T01:intron 25.0%
!! TGTTACTAAATTTAGGGTTA+GGG - Chr4:74529115-74529134 None:intergenic 25.0%
!! TTGTAGTCTGAAATTATCAT+GGG + Chr4:74530703-74530722 MsG0480022598.01.T01:intron 25.0%
!! TTGTTACTAAATTTAGGGTT+AGG - Chr4:74529116-74529135 None:intergenic 25.0%
!! TTTGTAGTCTGAAATTATCA+TGG + Chr4:74530702-74530721 MsG0480022598.01.T01:intron 25.0%
!!! AAGTTTTGATGATGAATTAC+AGG + Chr4:74529792-74529811 MsG0480022598.01.T01:five_prime_UTR 25.0%
AAGAAATCAAAGTCAGAGAT+TGG + Chr4:74529425-74529444 MsG0480022598.01.T01:five_prime_UTR 30.0%
AAGCTCATGAAAAACAAAAG+TGG + Chr4:74529482-74529501 MsG0480022598.01.T01:five_prime_UTR 30.0%
AATAATGTGCCTTCAAACAA+AGG + Chr4:74530308-74530327 MsG0480022598.01.T01:CDS 30.0%
ACAAACCATAAAACATTCAG+TGG - Chr4:74530687-74530706 None:intergenic 30.0%
ACATTCATTTCCCTCTTATT+TGG - Chr4:74530059-74530078 None:intergenic 30.0%
AGAAATCAAAGTCAGAGATT+GGG + Chr4:74529426-74529445 MsG0480022598.01.T01:five_prime_UTR 30.0%
AGATCATAAGGAAGAGAAAT+GGG + Chr4:74530147-74530166 MsG0480022598.01.T01:CDS 30.0%
ATAAAACATTCAGTGGAAAG+AGG - Chr4:74530680-74530699 None:intergenic 30.0%
ATTTATAGGAATTGCCTGAT+AGG + Chr4:74530437-74530456 MsG0480022598.01.T01:intron 30.0%
GTATTGTGAATGATTATCGT+TGG - Chr4:74529189-74529208 None:intergenic 30.0%
GTTGAGGAAAAACATAAGTT+GGG + Chr4:74530077-74530096 MsG0480022598.01.T01:CDS 30.0%
TCATCAAATTTCTCGTGTAT+TGG - Chr4:74529770-74529789 None:intergenic 30.0%
TCATGAAAAACAAAAGTGGT+TGG + Chr4:74529486-74529505 MsG0480022598.01.T01:five_prime_UTR 30.0%
TGTTGAGGAAAAACATAAGT+TGG + Chr4:74530076-74530095 MsG0480022598.01.T01:CDS 30.0%
TTTATAGGAATTGCCTGATA+GGG + Chr4:74530438-74530457 MsG0480022598.01.T01:intron 30.0%
! AAAAACATAAGTTGGGACTA+GGG + Chr4:74530084-74530103 MsG0480022598.01.T01:CDS 30.0%
! ATTTTGCGATTTTATGGCAT+CGG + Chr4:74529010-74529029 MsG0480022598.01.T01:five_prime_UTR 30.0%
! TCTTTCCACTGAATGTTTTA+TGG + Chr4:74530679-74530698 MsG0480022598.01.T01:intron 30.0%
AATTAAGCATCCTATGGATC+TGG + Chr4:74529580-74529599 MsG0480022598.01.T01:five_prime_UTR 35.0%
ATTAAGCATCCTATGGATCT+GGG + Chr4:74529581-74529600 MsG0480022598.01.T01:five_prime_UTR 35.0%
CAGATCATAAGGAAGAGAAA+TGG + Chr4:74530146-74530165 MsG0480022598.01.T01:CDS 35.0%
CTTAAGACTCGAATTGAATC+AGG + Chr4:74529296-74529315 MsG0480022598.01.T01:five_prime_UTR 35.0%
GAAATCAAAGTCAGAGATTG+GGG + Chr4:74529427-74529446 MsG0480022598.01.T01:five_prime_UTR 35.0%
GAGTCTTAAGATGACGAATT+TGG - Chr4:74529286-74529305 None:intergenic 35.0%
GCCATAAAATCGCAAAATCA+CGG - Chr4:74529008-74529027 None:intergenic 35.0%
GGTTACCAATTGGAAAAAGA+TGG + Chr4:74530250-74530269 MsG0480022598.01.T01:CDS 35.0%
TAACACTCCTGTAAATGCAA+CGG + Chr4:74529529-74529548 MsG0480022598.01.T01:five_prime_UTR 35.0%
TAAGAGGGAAATGAATGTTG+AGG + Chr4:74530061-74530080 MsG0480022598.01.T01:exon 35.0%
TTATCTTTCTCAATCTCCAC+AGG - Chr4:74530571-74530590 None:intergenic 35.0%
! AAAGAGGAAAAGAGAGTGTA+AGG - Chr4:74528828-74528847 None:intergenic 35.0%
! AAGAGGAAAAGAGAGTGTAA+GGG - Chr4:74528827-74528846 None:intergenic 35.0%
! ACTTTTGCAGATTCAGATTC+AGG + Chr4:74530745-74530764 MsG0480022598.01.T01:intron 35.0%
! CTAAATTTAGGGTTAGGGTT+AGG - Chr4:74529110-74529129 None:intergenic 35.0%
! CTTTTGCAGATTCAGATTCA+GGG + Chr4:74530746-74530765 MsG0480022598.01.T01:intron 35.0%
! GAAAAACATAAGTTGGGACT+AGG + Chr4:74530083-74530102 MsG0480022598.01.T01:CDS 35.0%
! GTGGTTGGATTTTTAACACT+TGG + Chr4:74529501-74529520 MsG0480022598.01.T01:five_prime_UTR 35.0%
!! CTGCAAAAGTATCGAAATTG+AGG - Chr4:74530735-74530754 None:intergenic 35.0%
!! TAGTATTGGTAGCTCTAAAG+AGG - Chr4:74528844-74528863 None:intergenic 35.0%
AACAGGTAGTGCAGATCATA+AGG + Chr4:74530135-74530154 MsG0480022598.01.T01:CDS 40.0%
AAGGAAGAGAAATGGGCATT+TGG + Chr4:74530154-74530173 MsG0480022598.01.T01:CDS 40.0%
AATCAGGTGAGTTTAAACCC+AGG + Chr4:74529312-74529331 MsG0480022598.01.T01:five_prime_UTR 40.0%
AGAGGTTATACCACTAGATG+AGG - Chr4:74530662-74530681 None:intergenic 40.0%
AGATGGTGAGCAAGATTAAG+CGG + Chr4:74530267-74530286 MsG0480022598.01.T01:CDS 40.0%
CATCGAATCGTACACAAAGA+CGG + Chr4:74529220-74529239 MsG0480022598.01.T01:five_prime_UTR 40.0%
CCACATTGAGAATTTCATGC+CGG + Chr4:74528956-74528975 MsG0480022598.01.T01:five_prime_UTR 40.0%
GAAGATAGATACTGTTGACG+AGG + Chr4:74530504-74530523 MsG0480022598.01.T01:CDS 40.0%
GCAGCTTCTTGAAAAATTCG+AGG + Chr4:74529733-74529752 MsG0480022598.01.T01:five_prime_UTR 40.0%
GCTGTCTAATGTAGCATTGT+TGG + Chr4:74530380-74530399 MsG0480022598.01.T01:intron 40.0%
GGATGAGATTGAGCTTGATA+TGG + Chr4:74530187-74530206 MsG0480022598.01.T01:CDS 40.0%
TAAAATCGCAAAATCACGGC+TGG - Chr4:74529004-74529023 None:intergenic 40.0%
TAAGAAATCAGGGAGCAAGA+AGG + Chr4:74529361-74529380 MsG0480022598.01.T01:five_prime_UTR 40.0%
TAAGAATGCTTACTCTACGC+CGG + Chr4:74529625-74529644 MsG0480022598.01.T01:five_prime_UTR 40.0%
TGAGATTGAGCTTGATATGG+AGG + Chr4:74530190-74530209 MsG0480022598.01.T01:CDS 40.0%
TGCCTTCAAACAAAGGCAAT+GGG + Chr4:74530315-74530334 MsG0480022598.01.T01:CDS 40.0%
TTCAAAGCCGTTGCATTTAC+AGG - Chr4:74529539-74529558 None:intergenic 40.0%
TTGCTCCCTGATTTCTTAGT+GGG - Chr4:74529359-74529378 None:intergenic 40.0%
! AGAGTGTAAGGGTTTGGAAT+TGG - Chr4:74528816-74528835 None:intergenic 40.0%
! GAAAAGAGAGTGTAAGGGTT+TGG - Chr4:74528822-74528841 None:intergenic 40.0%
! GATAAAGATATGGGTGCTAC+TGG + Chr4:74530586-74530605 MsG0480022598.01.T01:CDS 40.0%
! GCATTGACATACAATCCCAA+GGG + Chr4:74529686-74529705 MsG0480022598.01.T01:five_prime_UTR 40.0%
! GCCGTGATTTTGCGATTTTA+TGG + Chr4:74529004-74529023 MsG0480022598.01.T01:five_prime_UTR 40.0%
! GCTCACCATCTTTTTCCAAT+TGG - Chr4:74530258-74530277 None:intergenic 40.0%
! TCGATCGATTGGTTACCAAT+TGG + Chr4:74530240-74530259 MsG0480022598.01.T01:CDS 40.0%
! TGCATTGACATACAATCCCA+AGG + Chr4:74529685-74529704 MsG0480022598.01.T01:five_prime_UTR 40.0%
AAACCCAGGCTAAACCACAA+CGG + Chr4:74529326-74529345 MsG0480022598.01.T01:five_prime_UTR 45.0%
AACTGGTGACTGAGCTAATG+GGG - Chr4:74529968-74529987 None:intergenic 45.0%
ACAGGTGGGAAATTGTTTGC+TGG - Chr4:74530553-74530572 None:intergenic 45.0%
ACTACCTGTTCCATCTTCTC+TGG - Chr4:74530125-74530144 None:intergenic 45.0%
AGCAAACAATTTCCCACCTG+TGG + Chr4:74530552-74530571 MsG0480022598.01.T01:CDS 45.0%
AGTGTTAACATCATGGCCCT+TGG - Chr4:74529705-74529724 None:intergenic 45.0%
ATGTTGAACCAGAGAGGGAA+AGG + Chr4:74529830-74529849 MsG0480022598.01.T01:five_prime_UTR 45.0%
CCAACGGTAACGAACCAAAT+TGG + Chr4:74529042-74529061 MsG0480022598.01.T01:five_prime_UTR 45.0%
CCGGCATGAAATTCTCAATG+TGG - Chr4:74528959-74528978 None:intergenic 45.0%
CTTGCTCCCTGATTTCTTAG+TGG - Chr4:74529360-74529379 None:intergenic 45.0%
CTTTCTCAATCTCCACAGGT+GGG - Chr4:74530567-74530586 None:intergenic 45.0%
GAACCATGTTGAACCAGAGA+GGG + Chr4:74529825-74529844 MsG0480022598.01.T01:five_prime_UTR 45.0%
GAACTGGTGACTGAGCTAAT+GGG - Chr4:74529969-74529988 None:intergenic 45.0%
GCCTTCAAACAAAGGCAATG+GGG + Chr4:74530316-74530335 MsG0480022598.01.T01:CDS 45.0%
GCTACCAATACTATCTCCGA+CGG + Chr4:74528851-74528870 MsG0480022598.01.T01:five_prime_UTR 45.0%
GGTAGTGATTCCTCATCTAG+TGG + Chr4:74530649-74530668 MsG0480022598.01.T01:CDS 45.0%
GTGCCTTCAAACAAAGGCAA+TGG + Chr4:74530314-74530333 MsG0480022598.01.T01:CDS 45.0%
GTGGTCCCACTAAGAAATCA+GGG + Chr4:74529351-74529370 MsG0480022598.01.T01:five_prime_UTR 45.0%
GTGTTAACATCATGGCCCTT+GGG - Chr4:74529704-74529723 None:intergenic 45.0%
GTTGACGAGGATGTTGACAT+CGG + Chr4:74530517-74530536 MsG0480022598.01.T01:CDS 45.0%
TCAGATTCAGGGAGTTCTTC+AGG + Chr4:74530757-74530776 MsG0480022598.01.T01:CDS 45.0%
TCTTTCTCAATCTCCACAGG+TGG - Chr4:74530568-74530587 None:intergenic 45.0%
TGATATGGAGGCTGTTGACA+CGG + Chr4:74530202-74530221 MsG0480022598.01.T01:CDS 45.0%
TGTTGAACCAGAGAGGGAAA+GGG + Chr4:74529831-74529850 MsG0480022598.01.T01:five_prime_UTR 45.0%
TTGACAGTACCCAGATCCAT+AGG - Chr4:74529593-74529612 None:intergenic 45.0%
! AAGCGCGTGAGTTTTCCAAA+CGG + Chr4:74528874-74528893 MsG0480022598.01.T01:five_prime_UTR 45.0%
! AATGGGCATTTGGAGCAAGA+TGG + Chr4:74530164-74530183 MsG0480022598.01.T01:CDS 45.0%
! ACCCCATTGCCTTTGTTTGA+AGG - Chr4:74530320-74530339 None:intergenic 45.0%
! AGGAAAAGGTCGTTTGTTGC+CGG - Chr4:74529390-74529409 None:intergenic 45.0%
! ATGAATTACAGGCTAGCTCG+TGG + Chr4:74529803-74529822 MsG0480022598.01.T01:five_prime_UTR 45.0%
! ATGGGCATTTGGAGCAAGAT+GGG + Chr4:74530165-74530184 MsG0480022598.01.T01:CDS 45.0%
! CAACAAACGACCTTTTCCTG+CGG + Chr4:74529391-74529410 MsG0480022598.01.T01:five_prime_UTR 45.0%
! CCAATTTGGTTCGTTACCGT+TGG - Chr4:74529045-74529064 None:intergenic 45.0%
! GATTTTGCCACCAGAGAAGA+TGG + Chr4:74530112-74530131 MsG0480022598.01.T01:CDS 45.0%
! GTTGGATCGTCGATTGATTG+AGG - Chr4:74529171-74529190 None:intergenic 45.0%
! TTATTTGGATCCCTGGCCTT+TGG - Chr4:74530044-74530063 None:intergenic 45.0%
! TTCAGGAAGTGACTCTGAAG+CGG + Chr4:74530774-74530793 MsG0480022598.01.T01:CDS 45.0%
! TTCCCTCTTATTTGGATCCC+TGG - Chr4:74530051-74530070 None:intergenic 45.0%
! TTTCCCTCTCTGGTTCAACA+TGG - Chr4:74529831-74529850 None:intergenic 45.0%
!! AAAGATATGGGTGCTACTGG+TGG + Chr4:74530589-74530608 MsG0480022598.01.T01:CDS 45.0%
!! ATTGAGGAAGCGTCATCTGA+TGG - Chr4:74529155-74529174 None:intergenic 45.0%
!! TTAGAAGTACTAGCAGGCTC+AGG - Chr4:74529925-74529944 None:intergenic 45.0%
!! TTGAGGAAGCGTCATCTGAT+GGG - Chr4:74529154-74529173 None:intergenic 45.0%
AATTCCCTCACCGCAGGAAA+AGG - Chr4:74529404-74529423 None:intergenic 50.0%
AATTGGCTGCAACACAGAGG+CGG + Chr4:74529059-74529078 MsG0480022598.01.T01:five_prime_UTR 50.0%
ACATCAGCAGCAAAATCCGC+CGG - Chr4:74529647-74529666 None:intergenic 50.0%
ACCTGTTCCATCTTCTCTGG+TGG - Chr4:74530122-74530141 None:intergenic 50.0%
ACTGGTGACTGAGCTAATGG+GGG - Chr4:74529967-74529986 None:intergenic 50.0%
AGAGATTGGGGATGCGATGA+AGG + Chr4:74529439-74529458 MsG0480022598.01.T01:five_prime_UTR 50.0%
AGGCCAGGGATCCAAATAAG+AGG + Chr4:74530045-74530064 MsG0480022598.01.T01:five_prime_UTR 50.0%
ATAAACCAACGATCACGCGC+AGG - Chr4:74528915-74528934 None:intergenic 50.0%
ATTTCATGCCGGAGATACGC+CGG + Chr4:74528967-74528986 MsG0480022598.01.T01:five_prime_UTR 50.0%
CCAAATTGGCTGCAACACAG+AGG + Chr4:74529056-74529075 MsG0480022598.01.T01:five_prime_UTR 50.0%
CCTCTGTGTTGCAGCCAATT+TGG - Chr4:74529059-74529078 None:intergenic 50.0%
CGAACTGGTGACTGAGCTAA+TGG - Chr4:74529970-74529989 None:intergenic 50.0%
GCATCAACCTTCTCCCTATC+AGG - Chr4:74530454-74530473 None:intergenic 50.0%
GCTTCCGTCGGAGATAGTAT+TGG - Chr4:74528858-74528877 None:intergenic 50.0%
GGAACCATGTTGAACCAGAG+AGG + Chr4:74529824-74529843 MsG0480022598.01.T01:five_prime_UTR 50.0%
GGAATCACTACCAGAACTGC+TGG - Chr4:74530641-74530660 None:intergenic 50.0%
GGAATTGCCTGATAGGGAGA+AGG + Chr4:74530444-74530463 MsG0480022598.01.T01:intron 50.0%
GGCCAGGGATCCAAATAAGA+GGG + Chr4:74530046-74530065 MsG0480022598.01.T01:five_prime_UTR 50.0%
GGGCCATGATGTTAACACTG+CGG + Chr4:74529706-74529725 MsG0480022598.01.T01:five_prime_UTR 50.0%
GGTGGTCCCACTAAGAAATC+AGG + Chr4:74529350-74529369 MsG0480022598.01.T01:five_prime_UTR 50.0%
TCAGGGAGCAAGAAGGTTTC+CGG + Chr4:74529368-74529387 MsG0480022598.01.T01:five_prime_UTR 50.0%
TCCAATTCCAATCCCTCCAC+CGG + Chr4:74529876-74529895 MsG0480022598.01.T01:five_prime_UTR 50.0%
TCGCCGCAGTGTTAACATCA+TGG - Chr4:74529712-74529731 None:intergenic 50.0%
TGTTGACACGGAGACTCTCT+GGG + Chr4:74530214-74530233 MsG0480022598.01.T01:CDS 50.0%
TTCTGCTTCTTCCCCTCAGA+AGG - Chr4:74530484-74530503 None:intergenic 50.0%
TTCTTCAATTCCCTCACCGC+AGG - Chr4:74529410-74529429 None:intergenic 50.0%
! AATGGGGGATTCGAAGTGCT+TGG - Chr4:74529952-74529971 None:intergenic 50.0%
! AGTTTTCCAAACGGCGCGTA+GGG + Chr4:74528883-74528902 MsG0480022598.01.T01:five_prime_UTR 50.0%
! GCATCGGCGTTATTAGCCAA+CGG + Chr4:74529026-74529045 MsG0480022598.01.T01:five_prime_UTR 50.0%
! TCTCTGGGAACTCGATCGAT+TGG + Chr4:74530229-74530248 MsG0480022598.01.T01:CDS 50.0%
! TGGGCATTTGGAGCAAGATG+GGG + Chr4:74530166-74530185 MsG0480022598.01.T01:CDS 50.0%
!! GGCTGGTTAGAAGTACTAGC+AGG - Chr4:74529931-74529950 None:intergenic 50.0%
!! TCAGGAAGTGACTCTGAAGC+GGG + Chr4:74530775-74530794 MsG0480022598.01.T01:CDS 50.0%
!! TGAGGAAGCGTCATCTGATG+GGG - Chr4:74529153-74529172 None:intergenic 50.0%
!! TTTGGCTTGGGCTGCTTCAA+GGG - Chr4:74530026-74530045 None:intergenic 50.0%
AACCAGAGAGGGAAAGGGAG+AGG + Chr4:74529836-74529855 MsG0480022598.01.T01:five_prime_UTR 55.0%
ACCACCGTTGTGGTTTAGCC+TGG - Chr4:74529333-74529352 None:intergenic 55.0%
ACCAGAGAGGGAAAGGGAGA+GGG + Chr4:74529837-74529856 MsG0480022598.01.T01:five_prime_UTR 55.0%
ACCGGTGGAGGGATTGGAAT+TGG - Chr4:74529880-74529899 None:intergenic 55.0%
AGGCGGTGGAGCTGAATTCA+TGG + Chr4:74529076-74529095 MsG0480022598.01.T01:five_prime_UTR 55.0%
AGGCTAAACCACAACGGTGG+TGG + Chr4:74529332-74529351 MsG0480022598.01.T01:five_prime_UTR 55.0%
ATCGCAAAATCACGGCTGGC+CGG - Chr4:74529000-74529019 None:intergenic 55.0%
ATGCAACCCCTCCTTCTGAG+GGG + Chr4:74530470-74530489 MsG0480022598.01.T01:CDS 55.0%
CCACCGTTGTGGTTTAGCCT+GGG - Chr4:74529332-74529351 None:intergenic 55.0%
CTGTTGACACGGAGACTCTC+TGG + Chr4:74530213-74530232 MsG0480022598.01.T01:CDS 55.0%
CTTCTTCCCCTCAGAAGGAG+GGG - Chr4:74530479-74530498 None:intergenic 55.0%
CTTGAAGCAGCCCAAGCCAA+AGG + Chr4:74530025-74530044 MsG0480022598.01.T01:five_prime_UTR 55.0%
GAAAACTCACGCGCTTCCGT+CGG - Chr4:74528870-74528889 None:intergenic 55.0%
GAATGCTTACTCTACGCCGG+CGG + Chr4:74529628-74529647 MsG0480022598.01.T01:five_prime_UTR 55.0%
GATGCAACCCCTCCTTCTGA+GGG + Chr4:74530469-74530488 MsG0480022598.01.T01:CDS 55.0%
GATTAAGCGGCAGGCGCTAA+TGG + Chr4:74530280-74530299 MsG0480022598.01.T01:CDS 55.0%
GCCACCAGAGAAGATGGAAC+AGG + Chr4:74530118-74530137 MsG0480022598.01.T01:CDS 55.0%
GCTTCTTCCCCTCAGAAGGA+GGG - Chr4:74530480-74530499 None:intergenic 55.0%
GGAGCCACTGGAACTACTAC+TGG - Chr4:74530620-74530639 None:intergenic 55.0%
GGCGGTGGAGCTGAATTCAT+GGG + Chr4:74529077-74529096 MsG0480022598.01.T01:five_prime_UTR 55.0%
GGTGAGCAAGATTAAGCGGC+AGG + Chr4:74530271-74530290 MsG0480022598.01.T01:CDS 55.0%
GGTGCCAGTAGTAGTTCCAG+TGG + Chr4:74530613-74530632 MsG0480022598.01.T01:CDS 55.0%
TACTAGCAGGCTCAGGCAGT+GGG - Chr4:74529918-74529937 None:intergenic 55.0%
TGATGCAACCCCTCCTTCTG+AGG + Chr4:74530468-74530487 MsG0480022598.01.T01:CDS 55.0%
TGCTTCTTCCCCTCAGAAGG+AGG - Chr4:74530481-74530500 None:intergenic 55.0%
TTTGCTACCGGTGGAGGGAT+TGG - Chr4:74529886-74529905 None:intergenic 55.0%
! AACGACCTTTTCCTGCGGTG+AGG + Chr4:74529396-74529415 MsG0480022598.01.T01:five_prime_UTR 55.0%
! ACGACCTTTTCCTGCGGTGA+GGG + Chr4:74529397-74529416 MsG0480022598.01.T01:five_prime_UTR 55.0%
! GAGTTTTCCAAACGGCGCGT+AGG + Chr4:74528882-74528901 MsG0480022598.01.T01:five_prime_UTR 55.0%
! GGGTCTTGGCGTTTTGCTAC+CGG - Chr4:74529898-74529917 None:intergenic 55.0%
! TCTTGGCGTTTTGCTACCGG+TGG - Chr4:74529895-74529914 None:intergenic 55.0%
!! AGTGACTCTGAAGCGGGCAA+TGG + Chr4:74530781-74530800 MsG0480022598.01.T01:CDS 55.0%
!! CTTTGGCTTGGGCTGCTTCA+AGG - Chr4:74530027-74530046 None:intergenic 55.0%
!! GATATGGGTGCTACTGGTGG+CGG + Chr4:74530592-74530611 MsG0480022598.01.T01:CDS 55.0%
!! TCACTGGAAGTGCTCGCGTT+GGG - Chr4:74530001-74530020 None:intergenic 55.0%
!! TTCACTGGAAGTGCTCGCGT+TGG - Chr4:74530002-74530021 None:intergenic 55.0%
AACCAACGATCACGCGCAGG+TGG - Chr4:74528912-74528931 None:intergenic 60.0%
ACCAGAACTGCTGGAGCCAC+TGG - Chr4:74530632-74530651 None:intergenic 60.0%
ACCCTCTCCCTTTCCCTCTC+TGG - Chr4:74529841-74529860 None:intergenic 60.0%
CCCAGGCTAAACCACAACGG+TGG + Chr4:74529329-74529348 MsG0480022598.01.T01:five_prime_UTR 60.0%
GAGATACGCCGGAGTCTCAC+CGG + Chr4:74528978-74528997 MsG0480022598.01.T01:five_prime_UTR 60.0%
GGCTGCTTCAAGGGCTTCAC+TGG - Chr4:74530017-74530036 None:intergenic 60.0%
GGGGATGCGATGAAGGCTTG+TGG + Chr4:74529446-74529465 MsG0480022598.01.T01:five_prime_UTR 60.0%
GTACTAGCAGGCTCAGGCAG+TGG - Chr4:74529919-74529938 None:intergenic 60.0%
GTGAGACTCCGGCGTATCTC+CGG - Chr4:74528978-74528997 None:intergenic 60.0%
TAGTGGGACCACCACCGTTG+TGG - Chr4:74529343-74529362 None:intergenic 60.0%
TCCAGTGGCTCCAGCAGTTC+TGG + Chr4:74530628-74530647 MsG0480022598.01.T01:CDS 60.0%
TGGAATCCCTACGCGCCGTT+TGG - Chr4:74528892-74528911 None:intergenic 60.0%
TTCCACCTGCGCGTGATCGT+TGG + Chr4:74528907-74528926 MsG0480022598.01.T01:five_prime_UTR 60.0%
! CGTTGGGAGGGTATGCGAAC+TGG - Chr4:74529985-74530004 None:intergenic 60.0%
! GGATCCCTGGCCTTTGGCTT+GGG - Chr4:74530038-74530057 None:intergenic 60.0%
! GGCGTTTTGCTACCGGTGGA+GGG - Chr4:74529891-74529910 None:intergenic 60.0%
! GGGGATTCGAAGTGCTTGGC+TGG - Chr4:74529948-74529967 None:intergenic 60.0%
! TGGATCCCTGGCCTTTGGCT+TGG - Chr4:74530039-74530058 None:intergenic 60.0%
! TGGCGTTTTGCTACCGGTGG+AGG - Chr4:74529892-74529911 None:intergenic 60.0%
!! TGGAAGTGCTCGCGTTGGGA+GGG - Chr4:74529997-74530016 None:intergenic 60.0%
AGCAGCCCAAGCCAAAGGCC+AGG + Chr4:74530030-74530049 MsG0480022598.01.T01:five_prime_UTR 65.0%
CAGGCTCAGGCAGTGGGTCT+TGG - Chr4:74529912-74529931 None:intergenic 65.0%
GCAGCCCAAGCCAAAGGCCA+GGG + Chr4:74530031-74530050 MsG0480022598.01.T01:five_prime_UTR 65.0%
TGGCTGCAACACAGAGGCGG+TGG + Chr4:74529062-74529081 MsG0480022598.01.T01:five_prime_UTR 65.0%
!! CTGGAAGTGCTCGCGTTGGG+AGG - Chr4:74529998-74530017 None:intergenic 65.0%
! ACGGCTGGCCGGTGAGACTC+CGG - Chr4:74528989-74529008 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 74528797 74530813 74528797 ID=MsG0480022598.01;Name=MsG0480022598.01
Chr4 mRNA 74528797 74530813 74528797 ID=MsG0480022598.01.T01;Parent=MsG0480022598.01;Name=MsG0480022598.01.T01;_AED=0.21;_eAED=0.21;_QI=1274|1|1|1|0.75|0.6|5|0|183
Chr4 exon 74528797 74530337 74528797 ID=MsG0480022598.01.T01:exon:31493;Parent=MsG0480022598.01.T01
Chr4 five_prime_UTR 74528797 74530070 74528797 ID=MsG0480022598.01.T01:five_prime_utr;Parent=MsG0480022598.01.T01
Chr4 CDS 74530071 74530337 74530071 ID=MsG0480022598.01.T01:cds;Parent=MsG0480022598.01.T01
Chr4 CDS 74530445 74530670 74530445 ID=MsG0480022598.01.T01:cds;Parent=MsG0480022598.01.T01
Chr4 CDS 74530755 74530813 74530755 ID=MsG0480022598.01.T01:cds;Parent=MsG0480022598.01.T01
Chr4 mRNA 74528800 74530813 74528800 ID=MsG0480022598.01.T02;Parent=MsG0480022598.01;Name=MsG0480022598.01.T02;_AED=0.21;_eAED=0.21;_QI=1271|1|1|1|1|0.75|4|0|183
Chr4 exon 74528800 74530337 74528800 ID=MsG0480022598.01.T02:exon:31496;Parent=MsG0480022598.01.T02
Chr4 five_prime_UTR 74528800 74530070 74528800 ID=MsG0480022598.01.T02:five_prime_utr;Parent=MsG0480022598.01.T02
Chr4 CDS 74530071 74530337 74530071 ID=MsG0480022598.01.T02:cds;Parent=MsG0480022598.01.T02
Chr4 CDS 74530445 74530670 74530445 ID=MsG0480022598.01.T02:cds;Parent=MsG0480022598.01.T02
Chr4 CDS 74530755 74530813 74530755 ID=MsG0480022598.01.T02:cds;Parent=MsG0480022598.01.T02
Gene Sequence

>MsG0480022598.01.T02

ATGAATGTTGAGGAAAAACATAAGTTGGGACTAGGGTTGCAGATTTTGCCACCAGAGAAGATGGAACAGGTAGTGCAGATCATAAGGAAGAGAAATGGGCATTTGGAGCAAGATGGGGATGAGATTGAGCTTGATATGGAGGCTGTTGACACGGAGACTCTCTGGGAACTCGATCGATTGGTTACCAATTGGAAAAAGATGGTGAGCAAGATTAAGCGGCAGGCGCTAATGGATAATAATAATGTGCCTTCAAACAAAGGCAATGGGGAATTGCCTGATAGGGAGAAGGTTGATGCAACCCCTCCTTCTGAGGGGAAGAAGCAGAAGAAGATAGATACTGTTGACGAGGATGTTGACATCGGCGATGATATGCCAGCAAACAATTTCCCACCTGTGGAGATTGAGAAAGATAAAGATATGGGTGCTACTGGTGGCGGTGCCAGTAGTAGTTCCAGTGGCTCCAGCAGTTCTGGTAGTGATTCCTCATCTAGTGATTCAGATTCAGGGAGTTCTTCAGGAAGTGACTCTGAAGCGGGCAATGGTCATTTGTAG

>MsG0480022598.01.T01

ATGAATGTTGAGGAAAAACATAAGTTGGGACTAGGGTTGCAGATTTTGCCACCAGAGAAGATGGAACAGGTAGTGCAGATCATAAGGAAGAGAAATGGGCATTTGGAGCAAGATGGGGATGAGATTGAGCTTGATATGGAGGCTGTTGACACGGAGACTCTCTGGGAACTCGATCGATTGGTTACCAATTGGAAAAAGATGGTGAGCAAGATTAAGCGGCAGGCGCTAATGGATAATAATAATGTGCCTTCAAACAAAGGCAATGGGGAATTGCCTGATAGGGAGAAGGTTGATGCAACCCCTCCTTCTGAGGGGAAGAAGCAGAAGAAGATAGATACTGTTGACGAGGATGTTGACATCGGCGATGATATGCCAGCAAACAATTTCCCACCTGTGGAGATTGAGAAAGATAAAGATATGGGTGCTACTGGTGGCGGTGCCAGTAGTAGTTCCAGTGGCTCCAGCAGTTCTGGTAGTGATTCCTCATCTAGTGATTCAGATTCAGGGAGTTCTTCAGGAAGTGACTCTGAAGCGGGCAATGGTCATTTGTAG

Protein sequence

>MsG0480022598.01.T02

MNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATPPSEGKKQKKIDTVDEDVDIGDDMPANNFPPVEIEKDKDMGATGGGASSSSSGSSSSGSDSSSSDSDSGSSSGSDSEAGNGHL*

>MsG0480022598.01.T01

MNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATPPSEGKKQKKIDTVDEDVDIGDDMPANNFPPVEIEKDKDMGATGGGASSSSSGSSSSGSDSSSSDSDSGSSSGSDSEAGNGHL*