AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010769.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010769.01.T01 MTR_5g009170 97.194 392 11 0 1 392 1 392 0.0 793
MsG0280010769.01.T01 MTR_5g009160 91.931 347 28 0 46 392 3 349 0.0 679
MsG0280010769.01.T01 MTR_8g099535 82.849 344 59 0 46 389 3 346 0.0 613
MsG0280010769.01.T01 MTR_5g009160 91.273 275 24 0 118 392 12 286 0.0 538
MsG0280010769.01.T01 MTR_4g134490 65.988 344 115 2 44 385 22 365 4.16e-172 485
MsG0280010769.01.T01 MTR_8g096880 66.000 350 116 3 42 388 1 350 6.22e-172 484
MsG0280010769.01.T01 MTR_4g134490 64.857 350 115 3 44 385 22 371 1.64e-169 479
MsG0280010769.01.T01 MTR_8g096880 65.325 323 110 2 42 362 1 323 5.13e-154 437
MsG0280010769.01.T01 MTR_5g009160 89.815 216 22 0 118 333 12 227 3.64e-146 414
MsG0280010769.01.T01 MTR_8g096880 64.966 294 101 2 42 333 1 294 1.38e-138 397
MsG0280010769.01.T01 MTR_8g089180 42.898 352 179 6 49 389 73 413 6.34e-86 267
MsG0280010769.01.T01 MTR_8g089180 42.898 352 179 6 49 389 73 413 6.34e-86 267
MsG0280010769.01.T01 MTR_2g032100 42.775 346 184 6 49 387 73 411 5.30e-84 262
MsG0280010769.01.T01 MTR_2g032100 43.523 193 107 2 49 241 73 263 6.83e-46 160
MsG0280010769.01.T01 MTR_8g099285 85.185 54 8 0 278 331 3 56 3.76e-25 97.4
MsG0280010769.01.T01 MTR_1g009600 28.732 355 212 14 43 386 1 325 6.95e-23 101
MsG0280010769.01.T01 MTR_0034s0060 27.642 369 224 15 29 386 121 457 5.24e-22 98.6
MsG0280010769.01.T01 MTR_4g102270 27.701 361 217 13 35 377 85 419 1.24e-21 96.3
MsG0280010769.01.T01 MTR_0354s0040 26.263 396 240 14 14 379 41 414 6.78e-21 94.0
MsG0280010769.01.T01 MTR_4g129820 27.119 354 223 13 48 386 96 429 1.78e-20 93.2
MsG0280010769.01.T01 MTR_4g024600 26.316 361 229 12 38 379 91 433 3.96e-20 92.0
MsG0280010769.01.T01 MTR_2g073240 26.781 351 216 14 47 386 19 339 7.25e-20 92.0
MsG0280010769.01.T01 MTR_3g084090 26.377 345 220 12 48 377 100 425 2.33e-18 86.7
MsG0280010769.01.T01 MTR_5g011940 25.000 348 221 12 48 377 91 416 3.38e-18 86.3
MsG0280010769.01.T01 MTR_4g120030 25.449 334 197 16 45 369 109 399 2.39e-13 71.6
MsG0280010769.01.T01 MTR_1g067530 26.136 352 201 16 49 369 114 437 6.37e-13 70.5
MsG0280010769.01.T01 MTR_4g063600 25.469 373 215 14 8 369 6 326 1.08e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010769.01.T01 AT4G10960 81.503 346 62 1 42 387 1 344 0.0 597
MsG0280010769.01.T01 AT4G23920 80.357 336 66 0 47 382 3 338 0.0 582
MsG0280010769.01.T01 AT1G64440 77.616 344 76 1 49 391 5 348 0.0 579
MsG0280010769.01.T01 AT1G63180 66.569 341 112 2 47 385 7 347 5.92e-172 484
MsG0280010769.01.T01 AT1G12780 65.396 341 116 2 47 385 7 347 6.01e-169 476
MsG0280010769.01.T01 AT1G63180 64.407 295 102 3 47 338 7 301 3.17e-138 397
MsG0280010769.01.T01 AT1G30620 42.276 369 195 7 29 386 49 410 2.47e-87 271
MsG0280010769.01.T01 AT1G30620 42.276 369 195 7 29 386 49 410 2.47e-87 271
MsG0280010769.01.T01 AT1G30620 42.276 369 195 7 29 386 49 410 2.47e-87 271
MsG0280010769.01.T01 AT1G30620 42.276 369 195 7 29 386 49 410 2.47e-87 271
MsG0280010769.01.T01 AT1G30620 44.348 345 178 6 49 386 72 409 5.00e-87 270
MsG0280010769.01.T01 AT5G44480 41.714 350 182 6 49 387 73 411 4.11e-84 262
MsG0280010769.01.T01 AT5G44480 41.714 350 182 6 49 387 73 411 4.11e-84 262
MsG0280010769.01.T01 AT5G44480 41.714 350 182 6 49 387 73 411 4.11e-84 262
MsG0280010769.01.T01 AT5G44480 41.714 350 182 6 49 387 97 435 1.00e-83 262
MsG0280010769.01.T01 AT4G20460 43.064 346 183 6 49 387 72 410 2.60e-83 260
MsG0280010769.01.T01 AT1G30620 44.240 217 115 3 29 241 49 263 4.24e-53 178
MsG0280010769.01.T01 AT2G34850 42.128 235 123 5 160 387 1 229 3.50e-52 174
MsG0280010769.01.T01 AT2G34850 42.128 235 123 5 160 387 1 229 3.50e-52 174
MsG0280010769.01.T01 AT2G34850 42.128 235 123 5 160 387 1 229 3.50e-52 174
MsG0280010769.01.T01 AT2G34850 42.128 235 123 5 160 387 1 229 3.50e-52 174
MsG0280010769.01.T01 AT1G53500 27.066 351 215 14 47 386 9 329 2.83e-23 102
MsG0280010769.01.T01 AT4G00110 28.116 345 205 13 38 362 81 402 1.88e-22 99.0
MsG0280010769.01.T01 AT1G02000 27.536 345 207 13 38 362 82 403 1.19e-21 96.7
MsG0280010769.01.T01 AT2G45310 26.648 349 214 12 48 377 98 423 1.66e-21 96.3
MsG0280010769.01.T01 AT3G14790 26.781 351 216 13 47 386 7 327 1.42e-20 94.4
MsG0280010769.01.T01 AT3G14790 26.781 351 216 13 47 386 10 330 1.44e-20 94.4
MsG0280010769.01.T01 AT1G78570 26.781 351 216 14 47 386 7 327 1.78e-20 94.0
MsG0280010769.01.T01 AT3G23820 26.957 345 218 11 48 377 113 438 4.31e-19 89.0
MsG0280010769.01.T01 AT4G12250 26.513 347 217 11 48 377 97 422 5.33e-18 85.9
MsG0280010769.01.T01 AT2G47650 26.720 378 220 18 12 373 86 422 1.90e-16 81.3
MsG0280010769.01.T01 AT2G47650 27.297 381 220 19 12 373 86 428 2.66e-16 80.9
MsG0280010769.01.T01 AT4G30440 26.184 359 222 14 48 387 89 423 5.11e-16 79.7
MsG0280010769.01.T01 AT3G53520 23.747 379 240 15 3 369 70 411 4.32e-13 70.9
MsG0280010769.01.T01 AT2G28760 25.893 336 211 13 39 369 23 325 1.38e-11 65.9
MsG0280010769.01.T01 AT2G28760 25.893 336 211 13 39 369 23 325 1.38e-11 65.9
MsG0280010769.01.T01 AT2G28760 25.893 336 211 13 39 369 23 325 1.38e-11 65.9
MsG0280010769.01.T01 AT2G28760 25.824 364 229 14 14 369 26 356 1.74e-11 65.5

Find 119 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAACTCGCTGCTGAATT+TGG 0.168833 2:+74878573 MsG0280010769.01.T01:CDS
ATAAATGGCATAAGATTATT+TGG 0.181549 2:-74880367 None:intergenic
ATATCTAGGTTCCACCTTAC+AGG 0.242626 2:+74882049 MsG0280010769.01.T01:three_prime_UTR
ATAGGTTATTATTATATATA+AGG 0.248011 2:+74882074 MsG0280010769.01.T01:three_prime_UTR
ACCGCTACTTGCTGAATAAA+TGG 0.272562 2:-74880382 None:intergenic
AATTAGAATTACTACCGTTT+TGG 0.279718 2:-74878395 None:intergenic
GGTTCCACCTTACAGGTTAT+AGG 0.285218 2:+74882056 MsG0280010769.01.T01:three_prime_UTR
CATACCTTGGTTCGTCCATA+TGG 0.299595 2:-74879955 None:intergenic
TGCCATAGATGTTATGATCT+TGG 0.302207 2:+74881855 MsG0280010769.01.T01:three_prime_UTR
GATTGGGACAATCACTCTTT+TGG 0.302714 2:+74879721 MsG0280010769.01.T01:CDS
ATGGGATTTGAGTTTAGTTT+AGG 0.303793 2:-74878190 None:intergenic
CACACCCTAGTGGTTATATT+GGG 0.312315 2:+74880326 MsG0280010769.01.T01:CDS
TTTACCATACTATAGTTTAC+AGG 0.314846 2:+74882024 MsG0280010769.01.T01:three_prime_UTR
TGGGAATATACTATGCTCTA+TGG 0.320274 2:-74878209 None:intergenic
GCACACCCTAGTGGTTATAT+TGG 0.324849 2:+74880325 MsG0280010769.01.T01:CDS
TCATCTTCAGCCACTGTATA+TGG 0.330380 2:+74879880 MsG0280010769.01.T01:CDS
CCACTTTAATCTGTGGAATC+AGG 0.342821 2:-74881818 None:intergenic
CAATTCTCGCTTCGCTTCAA+TGG 0.344508 2:+74878284 MsG0280010769.01.T01:exon
ACCCAAGATCATAACATCTA+TGG 0.351243 2:-74881857 None:intergenic
TACTACAACAACAACTTGAT+TGG 0.354486 2:+74879704 MsG0280010769.01.T01:CDS
TGATGTGGCAGGGCAAAATA+TGG 0.355594 2:+74881731 MsG0280010769.01.T01:intron
AGGAAAGGGAACATCAGTTT+TGG 0.357526 2:+74880931 MsG0280010769.01.T01:CDS
GCCATAGATGTTATGATCTT+GGG 0.357704 2:+74881856 MsG0280010769.01.T01:three_prime_UTR
AAATCAAATCACATAACTTT+CGG 0.358397 2:+74878250 MsG0280010769.01.T01:five_prime_UTR
AGGAACTCGCTGCTGAATTT+GGG 0.373544 2:+74878574 MsG0280010769.01.T01:CDS
TGGAACGAAGAATTCTTAGA+AGG 0.402655 2:-74878369 None:intergenic
CATGTTCTACATGAACTTGA+TGG 0.404661 2:+74882104 MsG0280010769.01.T01:three_prime_UTR
GTTTATGCAATGCAGCAATA+TGG 0.405003 2:-74880715 None:intergenic
ATAACCTGTAAACTATAGTA+TGG 0.405799 2:-74882028 None:intergenic
AACAAAACCGTTCTAGTTAC+CGG 0.411332 2:+74878438 MsG0280010769.01.T01:CDS
ATAGTTTACAGGTTATATCT+AGG 0.411778 2:+74882035 MsG0280010769.01.T01:three_prime_UTR
AATGATTATAATACAGTTGA+TGG 0.415727 2:+74880436 MsG0280010769.01.T01:CDS
TGTGCCGTGATCAATGGAAT+TGG 0.420702 2:+74881765 MsG0280010769.01.T01:CDS
TCTCGCGTCGGCATCACTAA+TGG 0.429875 2:+74878309 MsG0280010769.01.T01:CDS
TCAGTACATGGAACCTCCTT+CGG 0.438588 2:-74879907 None:intergenic
GGCTGTGACGTTTATAACTT+AGG 0.439614 2:+74880905 MsG0280010769.01.T01:intron
TTGGAAGTCATGGCTGCTCA+TGG 0.451385 2:+74879740 MsG0280010769.01.T01:CDS
GGCCACTGCAGGTAGACATC+CGG 0.451531 2:+74879284 MsG0280010769.01.T01:intron
GTGAAGGCTGGCCGTAGGCC+TGG 0.454952 2:+74881464 MsG0280010769.01.T01:CDS
AGTTGCTGTTCATAGAGTTA+AGG 0.458867 2:+74878554 MsG0280010769.01.T01:CDS
CTTTCAGCAGCAAACCCATA+TGG 0.460790 2:+74879940 MsG0280010769.01.T01:CDS
ACTACAACAACAACTTGATT+GGG 0.462398 2:+74879705 MsG0280010769.01.T01:CDS
TAATATGAATATGAATGAAT+GGG 0.464371 2:-74878228 None:intergenic
CCACTAGGGTGTGCACCCAC+TGG 0.468983 2:-74880316 None:intergenic
TGCAGGTAGACATCCGGGAC+AGG 0.471148 2:+74879290 MsG0280010769.01.T01:intron
CACTAGGGTGTGCACCCACT+GGG 0.471612 2:-74880315 None:intergenic
TATAATACAGTTGATGGCAC+TGG 0.475559 2:+74880442 MsG0280010769.01.T01:CDS
TTAATATGAATATGAATGAA+TGG 0.477568 2:-74878229 None:intergenic
ATGAAATGTGCCGTGATCAA+TGG 0.481865 2:+74881759 MsG0280010769.01.T01:CDS
AACTAAATTCACAGAACCTA+TGG 0.482890 2:-74881916 None:intergenic
ATAATAACCTATAACCTGTA+AGG 0.486058 2:-74882063 None:intergenic
ATAGTCTAGATTTACAAAAC+AGG 0.486215 2:-74882130 None:intergenic
GCTCAAGTGCAGCCCTGTCC+CGG 0.493218 2:-74879303 None:intergenic
TTTACTCGGCGGTTTCAAAA+CGG 0.504395 2:+74878500 MsG0280010769.01.T01:CDS
AACACGGAAAGAGTATTTGT+TGG 0.504523 2:-74882180 None:intergenic
GACGTTTATAACTTAGGGAC+AGG 0.505250 2:+74880911 MsG0280010769.01.T01:CDS
TCAGAAAATTCCACTTGTGA+AGG 0.507254 2:+74881448 MsG0280010769.01.T01:intron
ATACCTTGGTTCGTCCATAT+GGG 0.507726 2:-74879954 None:intergenic
TCAATCGTGCTGATTCAGAT+TGG 0.507996 2:+74880266 MsG0280010769.01.T01:CDS
TATAACTTAGGGACAGGAAA+GGG 0.507998 2:+74880917 MsG0280010769.01.T01:CDS
GGGAATATACTATGCTCTAT+GGG 0.514215 2:-74878208 None:intergenic
ATAATACAGTTGATGGCACT+GGG 0.520770 2:+74880443 MsG0280010769.01.T01:CDS
TCTTCGTTCCAAACCCAAAA+CGG 0.520837 2:+74878381 MsG0280010769.01.T01:CDS
CATGTTGTTGATTTAGCTGA+TGG 0.521889 2:+74880692 MsG0280010769.01.T01:CDS
GCTTCAATGGCTTCTCGCGT+CGG 0.522264 2:+74878297 MsG0280010769.01.T01:exon
TATGGGTTTGCTGCTGAAAG+AGG 0.522622 2:-74879937 None:intergenic
AAAATTCCACTTGTGAAGGC+TGG 0.523612 2:+74881452 MsG0280010769.01.T01:CDS
AGAGCACCTTGTGAAAATTG+AGG 0.524145 2:-74878602 None:intergenic
GGTGTGGCTACCGATGTAAC+CGG 0.525888 2:-74878466 None:intergenic
GCTGTGACGTTTATAACTTA+GGG 0.529207 2:+74880906 MsG0280010769.01.T01:CDS
CCTGATTCCACAGATTAAAG+TGG 0.531279 2:+74881818 MsG0280010769.01.T01:exon
TCATTGTCCACTTTAATCTG+TGG 0.538500 2:-74881825 None:intergenic
ACCGATGTAACCGGCACCGC+CGG 0.541899 2:-74878457 None:intergenic
GTGCCGTGATCAATGGAATT+GGG 0.542969 2:+74881766 MsG0280010769.01.T01:CDS
CAGGAGATCCATAGCCGTAA+GGG 0.545140 2:-74881799 None:intergenic
AGAGGAAACTCTTCAGTACA+TGG 0.546798 2:-74879919 None:intergenic
GTTCTAGTTACCGGCGGTGC+CGG 0.549409 2:+74878447 MsG0280010769.01.T01:CDS
GCCACTGCAGGTAGACATCC+GGG 0.559878 2:+74879285 MsG0280010769.01.T01:intron
TTGTTGTTGTAGTAGAGTAA+CGG 0.566441 2:-74879695 None:intergenic
AAGCTGAAAGAGAACTCAAG+TGG 0.569400 2:+74881519 MsG0280010769.01.T01:CDS
TCAGGAGATCCATAGCCGTA+AGG 0.570852 2:-74881800 None:intergenic
TTTATTCAGCAAGTAGCGGT+TGG 0.573220 2:+74880385 MsG0280010769.01.T01:CDS
TGAAGAGTTTAAATAAGAAG+AGG 0.577484 2:-74878334 None:intergenic
CTTCAGCCACTGTATATGGT+TGG 0.578060 2:+74879884 MsG0280010769.01.T01:CDS
TATATTGGGGAGGATCCTCA+CGG 0.584038 2:+74880340 MsG0280010769.01.T01:CDS
GCCATTTATTCAGCAAGTAG+CGG 0.584484 2:+74880381 MsG0280010769.01.T01:CDS
GGCTGCTCATGGATGCAAGA+AGG 0.588720 2:+74879751 MsG0280010769.01.T01:CDS
AAACTAGAAGAAGCTGACAT+AGG 0.589751 2:+74880734 MsG0280010769.01.T01:CDS
TGTATATGGTTGGCCGAAGG+AGG 0.591711 2:+74879894 MsG0280010769.01.T01:CDS
CACTGTATATGGTTGGCCGA+AGG 0.593964 2:+74879891 MsG0280010769.01.T01:CDS
CACTTGTGAAGGCTGGCCGT+AGG 0.596509 2:+74881459 MsG0280010769.01.T01:CDS
ATATTGGGGAGGATCCTCAC+GGG 0.599402 2:+74880341 MsG0280010769.01.T01:CDS
TTATAACTTAGGGACAGGAA+AGG 0.600592 2:+74880916 MsG0280010769.01.T01:CDS
TTTCAGCATCACCAGGCCTA+CGG 0.603678 2:-74881475 None:intergenic
TCCTCCCCAATATAACCACT+AGG 0.607338 2:-74880331 None:intergenic
TAAACAATTTCAGCATCACC+AGG 0.611844 2:-74881482 None:intergenic
TTGAGATACTTCAACCCAGT+GGG 0.612544 2:+74880301 MsG0280010769.01.T01:CDS
TAGCCCAATTCCATTGATCA+CGG 0.615843 2:-74881769 None:intergenic
CCCTAGTGGTTATATTGGGG+AGG 0.615928 2:+74880330 MsG0280010769.01.T01:CDS
ATAACCTATAACCTGTAAGG+TGG 0.618440 2:-74882060 None:intergenic
ACCGGCGGTGCCGGTTACAT+CGG 0.627367 2:+74878456 MsG0280010769.01.T01:CDS
CTACGGCCAGCCTTCACAAG+TGG 0.628252 2:-74881458 None:intergenic
GCAGGTAGACATCCGGGACA+GGG 0.638284 2:+74879291 MsG0280010769.01.T01:intron
TCTGCCACATCAATCACCAT+AGG 0.643581 2:+74881900 MsG0280010769.01.T01:three_prime_UTR
CCTCCCCAATATAACCACTA+GGG 0.650185 2:-74880330 None:intergenic
GCCGAGTAAAAGCTGAAGAA+CGG 0.652299 2:-74878487 None:intergenic
GGCACCGCCGGTAACTAGAA+CGG 0.658798 2:-74878445 None:intergenic
ACACCCTAGTGGTTATATTG+GGG 0.659441 2:+74880327 MsG0280010769.01.T01:CDS
TTTGCTGGAATGAAAGCAGT+GGG 0.661073 2:+74879656 MsG0280010769.01.T01:CDS
CCAGTGGGTGCACACCCTAG+TGG 0.666271 2:+74880316 MsG0280010769.01.T01:CDS
AAACCCATATGGACGAACCA+AGG 0.674131 2:+74879951 MsG0280010769.01.T01:CDS
AAGCTTAATCTAACATAACA+CGG 0.679910 2:-74882196 None:intergenic
AGATTATTTGGAATCCCGTG+AGG 0.688575 2:-74880355 None:intergenic
AGAACCTATGGTGATTGATG+TGG 0.696407 2:-74881904 None:intergenic
CTTCGGCCAACCATATACAG+TGG 0.701226 2:-74879890 None:intergenic
ATTGAGATACTTCAACCCAG+TGG 0.701880 2:+74880300 MsG0280010769.01.T01:CDS
GTAAAAGCTGAAGAACGGTG+TGG 0.738273 2:-74878482 None:intergenic
TAATACAGTTGATGGCACTG+GGG 0.771630 2:+74880444 MsG0280010769.01.T01:CDS
AAAACCGTTCTAGTTACCGG+CGG 0.775437 2:+74878441 MsG0280010769.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAGAATAATAAAATATAAA+GGG - Chr2:74881698-74881717 None:intergenic 10.0%
!! ATAGGTTATTATTATATATA+AGG + Chr2:74882074-74882093 MsG0280010769.01.T01:three_prime_UTR 10.0%
!! TAGAGAATAATAAAATATAA+AGG - Chr2:74881699-74881718 None:intergenic 10.0%
!! CTAAAAAAAATTATTTGATG+TGG + Chr2:74881716-74881735 MsG0280010769.01.T01:intron 15.0%
!! CTACAATAAAAGAATAAAAA+AGG - Chr2:74879617-74879636 None:intergenic 15.0%
!! GAGAATAATAAAATATAAAG+GGG - Chr2:74881697-74881716 None:intergenic 15.0%
!! TAATATGAATATGAATGAAT+GGG - Chr2:74878231-74878250 None:intergenic 15.0%
!! TTAATATGAATATGAATGAA+TGG - Chr2:74878232-74878251 None:intergenic 15.0%
!!! ATTGATAATTTTCTGAATTT+AGG + Chr2:74878676-74878695 MsG0280010769.01.T01:intron 15.0%
!!! CTTTTTTATTCTTTTATTGT+AGG + Chr2:74879615-74879634 MsG0280010769.01.T01:intron 15.0%
!! AAATCAAATCACATAACTTT+CGG + Chr2:74878250-74878269 MsG0280010769.01.T01:five_prime_UTR 20.0%
!! AATGATTATAATACAGTTGA+TGG + Chr2:74880436-74880455 MsG0280010769.01.T01:CDS 20.0%
!! AATTGCAAAAATTCTTATCA+AGG - Chr2:74878806-74878825 None:intergenic 20.0%
!! AGGTAAGATAATGATATATT+TGG - Chr2:74880767-74880786 None:intergenic 20.0%
!! ATAAATGGCATAAGATTATT+TGG - Chr2:74880370-74880389 None:intergenic 20.0%
!! ATAATAAAATATAAAGGGGT+AGG - Chr2:74881693-74881712 None:intergenic 20.0%
!! GATAATTAGAAAGAATTTGA+AGG - Chr2:74880095-74880114 None:intergenic 20.0%
!! GCATGAATATTAAATACATA+AGG - Chr2:74880869-74880888 None:intergenic 20.0%
!! TACTGAGAATCAAAATAAAA+AGG - Chr2:74879382-74879401 None:intergenic 20.0%
!! TATGATAAGGAAATTGTTTA+GGG + Chr2:74879974-74879993 MsG0280010769.01.T01:intron 20.0%
!! TATTTGATTCCTATAACATT+TGG - Chr2:74881270-74881289 None:intergenic 20.0%
!! TCATCTTTATGATATATTCT+GGG + Chr2:74881641-74881660 MsG0280010769.01.T01:intron 20.0%
!! TGAAGTAGATGAATAATTTA+AGG + Chr2:74880063-74880082 MsG0280010769.01.T01:intron 20.0%
!! TTCATCTTTATGATATATTC+TGG + Chr2:74881640-74881659 MsG0280010769.01.T01:intron 20.0%
!!! AGTATTTTTGTTTTGAAAAG+TGG - Chr2:74881050-74881069 None:intergenic 20.0%
!!! ATAATTTAACTCTTGTTTAG+AGG + Chr2:74878983-74879002 MsG0280010769.01.T01:intron 20.0%
!!! ATTCAAGCAAAAATTTTAAC+AGG - Chr2:74880546-74880565 None:intergenic 20.0%
!!! ATTGGAAAAAGAAAATTTTG+AGG + Chr2:74880835-74880854 MsG0280010769.01.T01:intron 20.0%
!!! TAATTTAACTCTTGTTTAGA+GGG + Chr2:74878984-74879003 MsG0280010769.01.T01:intron 20.0%
!!! TGCAATTTGATGTAATTTTT+GGG + Chr2:74878819-74878838 MsG0280010769.01.T01:intron 20.0%
!!! TTCAAGCAAAAATTTTAACA+GGG - Chr2:74880545-74880564 None:intergenic 20.0%
!!! TTGCAATTTGATGTAATTTT+TGG + Chr2:74878818-74878837 MsG0280010769.01.T01:intron 20.0%
!!! TTTCTCTTATAGCATTTTAA+AGG + Chr2:74881954-74881973 MsG0280010769.01.T01:three_prime_UTR 20.0%
! AAAAAATTATTTGATGTGGC+AGG + Chr2:74881720-74881739 MsG0280010769.01.T01:intron 25.0%
! AAAAATTATTTGATGTGGCA+GGG + Chr2:74881721-74881740 MsG0280010769.01.T01:intron 25.0%
! AAAGCCAGAAGTAAAATTAA+GGG - Chr2:74879197-74879216 None:intergenic 25.0%
! AGTAGATGAATAATTTAAGG+AGG + Chr2:74880066-74880085 MsG0280010769.01.T01:intron 25.0%
! ATAACCTGTAAACTATAGTA+TGG - Chr2:74882031-74882050 None:intergenic 25.0%
! ATAATAACCTATAACCTGTA+AGG - Chr2:74882066-74882085 None:intergenic 25.0%
! ATAGTCTAGATTTACAAAAC+AGG - Chr2:74882133-74882152 None:intergenic 25.0%
! ATAGTTTACAGGTTATATCT+AGG + Chr2:74882035-74882054 MsG0280010769.01.T01:three_prime_UTR 25.0%
! ATATACATATATAACGCTGA+AGG - Chr2:74878646-74878665 None:intergenic 25.0%
! CGTCACTAATAATGAAAAAT+CGG + Chr2:74879528-74879547 MsG0280010769.01.T01:intron 25.0%
! GCAAAACATTAGATAAGTTT+GGG + Chr2:74879453-74879472 MsG0280010769.01.T01:intron 25.0%
! GTATGATAAGGAAATTGTTT+AGG + Chr2:74879973-74879992 MsG0280010769.01.T01:intron 25.0%
! TAATCTTTAATCGACAATCA+CGG + Chr2:74881321-74881340 MsG0280010769.01.T01:intron 25.0%
! TACACGTGAAATAATCAAAA+CGG - Chr2:74880497-74880516 None:intergenic 25.0%
! TATTCGAACACAAAATATCT+TGG - Chr2:74881125-74881144 None:intergenic 25.0%
! TGAAGAGTTTAAATAAGAAG+AGG - Chr2:74878337-74878356 None:intergenic 25.0%
! TGCAAAACATTAGATAAGTT+TGG + Chr2:74879452-74879471 MsG0280010769.01.T01:intron 25.0%
! TTCAAAACCCCAAAAATATA+TGG - Chr2:74880030-74880049 None:intergenic 25.0%
! TTCCTTTCTAATATCATGTA+AGG + Chr2:74881574-74881593 MsG0280010769.01.T01:intron 25.0%
! TTGATATAATCCTTACTTTG+TGG - Chr2:74879341-74879360 None:intergenic 25.0%
! TTTACCATACTATAGTTTAC+AGG + Chr2:74882024-74882043 MsG0280010769.01.T01:three_prime_UTR 25.0%
!! AAACTTATCTAATGTTTTGC+AGG - Chr2:74879453-74879472 None:intergenic 25.0%
!! AATTAGAATTACTACCGTTT+TGG - Chr2:74878398-74878417 None:intergenic 25.0%
!! AATTTAACTCTTGTTTAGAG+GGG + Chr2:74878985-74879004 MsG0280010769.01.T01:intron 25.0%
!! ATTAGAATTACTACCGTTTT+GGG - Chr2:74878397-74878416 None:intergenic 25.0%
!! GAATCAAATAATTTTCCTCT+AGG + Chr2:74881280-74881299 MsG0280010769.01.T01:intron 25.0%
!! GATTTGTGTAATTTTTGTGA+TGG + Chr2:74878734-74878753 MsG0280010769.01.T01:intron 25.0%
!! GCAATTTGATGTAATTTTTG+GGG + Chr2:74878820-74878839 MsG0280010769.01.T01:intron 25.0%
!! TGTCGATTAAAGATTAAGTT+TGG - Chr2:74881317-74881336 None:intergenic 25.0%
!!! AAATTTTAACAGGGTACAAA+TGG - Chr2:74880536-74880555 None:intergenic 25.0%
!!! AATTTTAACAGGGTACAAAT+GGG - Chr2:74880535-74880554 None:intergenic 25.0%
!!! AGACAGTTCTGATTATATTT+TGG + Chr2:74879263-74879282 MsG0280010769.01.T01:intron 25.0%
!!! TGGTTTTTTTCATAGGATTT+TGG - Chr2:74879161-74879180 None:intergenic 25.0%
!!! TTTTTTCATAGGATTTTGGA+GGG - Chr2:74879157-74879176 None:intergenic 25.0%
!!! TTTTTTTCATAGGATTTTGG+AGG - Chr2:74879158-74879177 None:intergenic 25.0%
AACTAAATTCACAGAACCTA+TGG - Chr2:74881919-74881938 None:intergenic 30.0%
ACAATTTCCTTATCATACCT+TGG - Chr2:74879971-74879990 None:intergenic 30.0%
ACTACAACAACAACTTGATT+GGG + Chr2:74879705-74879724 MsG0280010769.01.T01:CDS 30.0%
AGAATCTCACACATTAAATG+TGG - Chr2:74879508-74879527 None:intergenic 30.0%
ATAGCACTCCATAAAGAAAA+GGG - Chr2:74881223-74881242 None:intergenic 30.0%
CTATAAGAGAAAAAGAGCTT+CGG - Chr2:74881946-74881965 None:intergenic 30.0%
GAAAGCCAGAAGTAAAATTA+AGG - Chr2:74879198-74879217 None:intergenic 30.0%
GAAAGCTCAAAAGCAATATT+TGG - Chr2:74878874-74878893 None:intergenic 30.0%
GCTCAATGTTATACATGATT+TGG - Chr2:74881386-74881405 None:intergenic 30.0%
GGAAAGGTAATAACTTCATT+TGG + Chr2:74880983-74881002 MsG0280010769.01.T01:intron 30.0%
GTCCTTACATGATATTAGAA+AGG - Chr2:74881579-74881598 None:intergenic 30.0%
TACTACAACAACAACTTGAT+TGG + Chr2:74879704-74879723 MsG0280010769.01.T01:CDS 30.0%
TATAGCACTCCATAAAGAAA+AGG - Chr2:74881224-74881243 None:intergenic 30.0%
TATTCCTTATCTAACTGATC+AGG + Chr2:74881549-74881568 MsG0280010769.01.T01:intron 30.0%
TCTAATATCATGTAAGGACT+GGG + Chr2:74881580-74881599 MsG0280010769.01.T01:intron 30.0%
TTCTAATATCATGTAAGGAC+TGG + Chr2:74881579-74881598 MsG0280010769.01.T01:intron 30.0%
TTTATGATATATTCTGGGTG+TGG + Chr2:74881646-74881665 MsG0280010769.01.T01:intron 30.0%
! ATGGGATTTGAGTTTAGTTT+AGG - Chr2:74878193-74878212 None:intergenic 30.0%
! ATTTTTGCTTCCACAAAGTA+AGG + Chr2:74879328-74879347 MsG0280010769.01.T01:intron 30.0%
! GAATAACCTCAATTTTCACA+AGG + Chr2:74878596-74878615 MsG0280010769.01.T01:CDS 30.0%
! TACCTTTGATTTCTTCACTA+TGG + Chr2:74880622-74880641 MsG0280010769.01.T01:intron 30.0%
! TGTCTCTGCCATATATTTTT+GGG + Chr2:74880019-74880038 MsG0280010769.01.T01:intron 30.0%
! TTGTGTAATTTTTGTGATGG+CGG + Chr2:74878737-74878756 MsG0280010769.01.T01:intron 30.0%
! TTGTTGTTGTAGTAGAGTAA+CGG - Chr2:74879698-74879717 None:intergenic 30.0%
!! ACACTTACTCGTTTTGTTAT+TGG + Chr2:74880817-74880836 MsG0280010769.01.T01:intron 30.0%
!! CACATGCTTTTATTTCTTTG+CGG + Chr2:74881076-74881095 MsG0280010769.01.T01:intron 30.0%
!!! AAAAGAAAATTTTGAGGCAG+TGG + Chr2:74880841-74880860 MsG0280010769.01.T01:intron 30.0%
!!! CGAGTAAGTGTTTTTTTGAA+AGG - Chr2:74880808-74880827 None:intergenic 30.0%
!!! TTCTCTTTCAGCTTTTTTTG+TGG - Chr2:74881513-74881532 None:intergenic 30.0%
AAACTAGAAGAAGCTGACAT+AGG + Chr2:74880734-74880753 MsG0280010769.01.T01:CDS 35.0%
AAAGCCTGATCAGTTAGATA+AGG - Chr2:74881556-74881575 None:intergenic 35.0%
AAGTGGCTACCAAATGTTAT+AGG + Chr2:74881258-74881277 MsG0280010769.01.T01:intron 35.0%
ACATTAAATGTGGAGAAGTG+TGG - Chr2:74879498-74879517 None:intergenic 35.0%
ACCCAAGATCATAACATCTA+TGG - Chr2:74881860-74881879 None:intergenic 35.0%
AGAGTTGACAGAAAGGATAA+AGG - Chr2:74881023-74881042 None:intergenic 35.0%
AGCCATAGTGAAGAAATCAA+AGG - Chr2:74880627-74880646 None:intergenic 35.0%
ATAACCTATAACCTGTAAGG+TGG - Chr2:74882063-74882082 None:intergenic 35.0%
ATAGATAGAGACATGCAAAG+TGG + Chr2:74881241-74881260 MsG0280010769.01.T01:intron 35.0%
ATGGTTCTTACCTTATTCTC+AGG + Chr2:74880655-74880674 MsG0280010769.01.T01:intron 35.0%
CATGTTCTACATGAACTTGA+TGG + Chr2:74882104-74882123 MsG0280010769.01.T01:three_prime_UTR 35.0%
CTGAAGGTAAAAAATCGCAA+CGG - Chr2:74878630-74878649 None:intergenic 35.0%
GCCATAGATGTTATGATCTT+GGG + Chr2:74881856-74881875 MsG0280010769.01.T01:three_prime_UTR 35.0%
GCTGTGACGTTTATAACTTA+GGG + Chr2:74880906-74880925 MsG0280010769.01.T01:CDS 35.0%
GGGAATATACTATGCTCTAT+GGG - Chr2:74878211-74878230 None:intergenic 35.0%
GTTTATGCAATGCAGCAATA+TGG - Chr2:74880718-74880737 None:intergenic 35.0%
TAAACAATTTCAGCATCACC+AGG - Chr2:74881485-74881504 None:intergenic 35.0%
TATAACTTAGGGACAGGAAA+GGG + Chr2:74880917-74880936 MsG0280010769.01.T01:CDS 35.0%
TCAGAAAATTCCACTTGTGA+AGG + Chr2:74881448-74881467 MsG0280010769.01.T01:intron 35.0%
TCATTGTCCACTTTAATCTG+TGG - Chr2:74881828-74881847 None:intergenic 35.0%
TCTTACCTTATTCTCAGGTT+CGG + Chr2:74880660-74880679 MsG0280010769.01.T01:intron 35.0%
TGCCATAGATGTTATGATCT+TGG + Chr2:74881855-74881874 MsG0280010769.01.T01:three_prime_UTR 35.0%
TGGAACGAAGAATTCTTAGA+AGG - Chr2:74878372-74878391 None:intergenic 35.0%
TGGAATTAGAGTTGACAGAA+AGG - Chr2:74881030-74881049 None:intergenic 35.0%
TGGGAATATACTATGCTCTA+TGG - Chr2:74878212-74878231 None:intergenic 35.0%
TTAGAGGGGAACAATTTAGA+TGG + Chr2:74878999-74879018 MsG0280010769.01.T01:intron 35.0%
TTATAACTTAGGGACAGGAA+AGG + Chr2:74880916-74880935 MsG0280010769.01.T01:CDS 35.0%
TTCTTCACTATGGCTCTTAT+TGG + Chr2:74880632-74880651 MsG0280010769.01.T01:intron 35.0%
TTGGATAGAAAGAATCCTAG+AGG - Chr2:74881298-74881317 None:intergenic 35.0%
! AACAAAACCGTTCTAGTTAC+CGG + Chr2:74878438-74878457 MsG0280010769.01.T01:CDS 35.0%
! AGATAACATGAAGCACCAAA+TGG - Chr2:74879560-74879579 None:intergenic 35.0%
! AGTTGCTGTTCATAGAGTTA+AGG + Chr2:74878554-74878573 MsG0280010769.01.T01:CDS 35.0%
! CACACCCTTAATTTTACTTC+TGG + Chr2:74879190-74879209 MsG0280010769.01.T01:intron 35.0%
! CTGTCTCTGCCATATATTTT+TGG + Chr2:74880018-74880037 MsG0280010769.01.T01:intron 35.0%
! GATGCAGTTATACATTTTGC+TGG + Chr2:74879641-74879660 MsG0280010769.01.T01:CDS 35.0%
! TGTTTGCAGTTTGTTCAGTA+TGG + Chr2:74879233-74879252 MsG0280010769.01.T01:intron 35.0%
!! AACACGGAAAGAGTATTTGT+TGG - Chr2:74882183-74882202 None:intergenic 35.0%
!! AATCACTCTTTTGGAAGTCA+TGG + Chr2:74879730-74879749 MsG0280010769.01.T01:CDS 35.0%
!! ATAATACAGTTGATGGCACT+GGG + Chr2:74880443-74880462 MsG0280010769.01.T01:CDS 35.0%
!! CATGTTGTTGATTTAGCTGA+TGG + Chr2:74880692-74880711 MsG0280010769.01.T01:CDS 35.0%
!! GTCTCTGCCATATATTTTTG+GGG + Chr2:74880020-74880039 MsG0280010769.01.T01:intron 35.0%
!! TATAATACAGTTGATGGCAC+TGG + Chr2:74880442-74880461 MsG0280010769.01.T01:CDS 35.0%
!!! AATTACTACCGTTTTGGGTT+TGG - Chr2:74878392-74878411 None:intergenic 35.0%
!!! GAAGGTAAGTTCCTTGTTTT+TGG + Chr2:74879769-74879788 MsG0280010769.01.T01:intron 35.0%
!!! TGCGAGTTGGTTTTTTTCAT+AGG - Chr2:74879168-74879187 None:intergenic 35.0%
AAAATTCCACTTGTGAAGGC+TGG + Chr2:74881452-74881471 MsG0280010769.01.T01:CDS 40.0%
AAAGGATAAAGGCGACAGAT+AGG - Chr2:74881012-74881031 None:intergenic 40.0%
AACTGAGACTATAGAGCAAC+TGG - Chr2:74881196-74881215 None:intergenic 40.0%
AAGCTGAAAGAGAACTCAAG+TGG + Chr2:74881519-74881538 MsG0280010769.01.T01:CDS 40.0%
ACACCCTAGTGGTTATATTG+GGG + Chr2:74880327-74880346 MsG0280010769.01.T01:CDS 40.0%
AGAACCTATGGTGATTGATG+TGG - Chr2:74881907-74881926 None:intergenic 40.0%
AGAGGAAACTCTTCAGTACA+TGG - Chr2:74879922-74879941 None:intergenic 40.0%
ATATCTAGGTTCCACCTTAC+AGG + Chr2:74882049-74882068 MsG0280010769.01.T01:three_prime_UTR 40.0%
ATATTCATGCTGTGTGTGTC+TGG + Chr2:74880879-74880898 MsG0280010769.01.T01:intron 40.0%
ATGAAATGTGCCGTGATCAA+TGG + Chr2:74881759-74881778 MsG0280010769.01.T01:CDS 40.0%
ATTGAGATACTTCAACCCAG+TGG + Chr2:74880300-74880319 MsG0280010769.01.T01:CDS 40.0%
CACACCCTAGTGGTTATATT+GGG + Chr2:74880326-74880345 MsG0280010769.01.T01:CDS 40.0%
CCACTTTAATCTGTGGAATC+AGG - Chr2:74881821-74881840 None:intergenic 40.0%
CCTGATTCCACAGATTAAAG+TGG + Chr2:74881818-74881837 MsG0280010769.01.T01:exon 40.0%
CGTATCCTTAACTACAGTTG+GGG - Chr2:74881155-74881174 None:intergenic 40.0%
CTTACCTTATTCTCAGGTTC+GGG + Chr2:74880661-74880680 MsG0280010769.01.T01:intron 40.0%
CTTGAATAAACTGTCTGTCC+TGG + Chr2:74880559-74880578 MsG0280010769.01.T01:intron 40.0%
GACGTTTATAACTTAGGGAC+AGG + Chr2:74880911-74880930 MsG0280010769.01.T01:CDS 40.0%
GATATATTCTGGGTGTGGTT+TGG + Chr2:74881651-74881670 MsG0280010769.01.T01:intron 40.0%
GCCATTTATTCAGCAAGTAG+CGG + Chr2:74880381-74880400 MsG0280010769.01.T01:CDS 40.0%
GCGTATCCTTAACTACAGTT+GGG - Chr2:74881156-74881175 None:intergenic 40.0%
GGCTGTGACGTTTATAACTT+AGG + Chr2:74880905-74880924 MsG0280010769.01.T01:intron 40.0%
GTGCATCTCATCCAAAAACA+AGG - Chr2:74879783-74879802 None:intergenic 40.0%
TAATCCCGAACCTGAGAATA+AGG - Chr2:74880668-74880687 None:intergenic 40.0%
TAGCCCAATTCCATTGATCA+CGG - Chr2:74881772-74881791 None:intergenic 40.0%
TCACTATGGCTCTTATTGGA+TGG + Chr2:74880636-74880655 MsG0280010769.01.T01:intron 40.0%
TCATCTTCAGCCACTGTATA+TGG + Chr2:74879880-74879899 MsG0280010769.01.T01:CDS 40.0%
TCTTCGTTCCAAACCCAAAA+CGG + Chr2:74878381-74878400 MsG0280010769.01.T01:CDS 40.0%
TGCGTATCCTTAACTACAGT+TGG - Chr2:74881157-74881176 None:intergenic 40.0%
TTGAGATACTTCAACCCAGT+GGG + Chr2:74880301-74880320 MsG0280010769.01.T01:CDS 40.0%
TTTACTCGGCGGTTTCAAAA+CGG + Chr2:74878500-74878519 MsG0280010769.01.T01:CDS 40.0%
TTTATTCAGCAAGTAGCGGT+TGG + Chr2:74880385-74880404 MsG0280010769.01.T01:CDS 40.0%
TTTCCAAAAACTGTCAGTGC+AGG - Chr2:74880418-74880437 None:intergenic 40.0%
TTTGCTGGAATGAAAGCAGT+GGG + Chr2:74879656-74879675 MsG0280010769.01.T01:CDS 40.0%
! AAAAATCGGCTCCTTCCATT+TGG + Chr2:74879542-74879561 MsG0280010769.01.T01:intron 40.0%
! AACATGAAGCACCAAATGGA+AGG - Chr2:74879556-74879575 None:intergenic 40.0%
! ACCGCTACTTGCTGAATAAA+TGG - Chr2:74880385-74880404 None:intergenic 40.0%
! ACCGTTCTTCAGCTTTTACT+CGG + Chr2:74878486-74878505 MsG0280010769.01.T01:CDS 40.0%
! AGAGCACCTTGTGAAAATTG+AGG - Chr2:74878605-74878624 None:intergenic 40.0%
! AGATTATTTGGAATCCCGTG+AGG - Chr2:74880358-74880377 None:intergenic 40.0%
! AGGAAAGGGAACATCAGTTT+TGG + Chr2:74880931-74880950 MsG0280010769.01.T01:CDS 40.0%
! AGTTGCCTCCCTTTTCTTTA+TGG + Chr2:74881212-74881231 MsG0280010769.01.T01:intron 40.0%
! ATACCTTGGTTCGTCCATAT+GGG - Chr2:74879957-74879976 None:intergenic 40.0%
! GATTGGGACAATCACTCTTT+TGG + Chr2:74879721-74879740 MsG0280010769.01.T01:CDS 40.0%
! TTTTGCTGGAATGAAAGCAG+TGG + Chr2:74879655-74879674 MsG0280010769.01.T01:CDS 40.0%
!! TAATACAGTTGATGGCACTG+GGG + Chr2:74880444-74880463 MsG0280010769.01.T01:CDS 40.0%
!! TCAATCGTGCTGATTCAGAT+TGG + Chr2:74880266-74880285 MsG0280010769.01.T01:CDS 40.0%
!!! GATTATATTTTGGCCACTGC+AGG + Chr2:74879273-74879292 MsG0280010769.01.T01:intron 40.0%
!!! GTAATTTTTGTGATGGCGGT+GGG + Chr2:74878741-74878760 MsG0280010769.01.T01:intron 40.0%
!!! TGTAATTTTTGTGATGGCGG+TGG + Chr2:74878740-74878759 MsG0280010769.01.T01:intron 40.0%
AAACCCATATGGACGAACCA+AGG + Chr2:74879951-74879970 MsG0280010769.01.T01:CDS 45.0%
AAGGAACTCGCTGCTGAATT+TGG + Chr2:74878573-74878592 MsG0280010769.01.T01:CDS 45.0%
AGCAAAAACCCTTACGGCTA+TGG + Chr2:74881791-74881810 MsG0280010769.01.T01:CDS 45.0%
AGGAACTCGCTGCTGAATTT+GGG + Chr2:74878574-74878593 MsG0280010769.01.T01:CDS 45.0%
AGTTGCCCCAACTGTAGTTA+AGG + Chr2:74881147-74881166 MsG0280010769.01.T01:intron 45.0%
CAATTCTCGCTTCGCTTCAA+TGG + Chr2:74878284-74878303 MsG0280010769.01.T01:exon 45.0%
CCTCCCCAATATAACCACTA+GGG - Chr2:74880333-74880352 None:intergenic 45.0%
CTTCAGCCACTGTATATGGT+TGG + Chr2:74879884-74879903 MsG0280010769.01.T01:CDS 45.0%
CTTTCAGCAGCAAACCCATA+TGG + Chr2:74879940-74879959 MsG0280010769.01.T01:CDS 45.0%
GCACACCCTAGTGGTTATAT+TGG + Chr2:74880325-74880344 MsG0280010769.01.T01:CDS 45.0%
GCACTCCATAAAGAAAAGGG+AGG - Chr2:74881220-74881239 None:intergenic 45.0%
GCCGAGTAAAAGCTGAAGAA+CGG - Chr2:74878490-74878509 None:intergenic 45.0%
GGACACGAGTAAGTGTTAGA+AGG - Chr2:74880787-74880806 None:intergenic 45.0%
GGACGAACCAAGGTATGATA+AGG + Chr2:74879961-74879980 MsG0280010769.01.T01:intron 45.0%
GGTTCCACCTTACAGGTTAT+AGG + Chr2:74882056-74882075 MsG0280010769.01.T01:three_prime_UTR 45.0%
GTAAAAGCTGAAGAACGGTG+TGG - Chr2:74878485-74878504 None:intergenic 45.0%
GTGCCGTGATCAATGGAATT+GGG + Chr2:74881766-74881785 MsG0280010769.01.T01:CDS 45.0%
TATATTGGGGAGGATCCTCA+CGG + Chr2:74880340-74880359 MsG0280010769.01.T01:CDS 45.0%
TCAGTACATGGAACCTCCTT+CGG - Chr2:74879910-74879929 None:intergenic 45.0%
TCCTCCCCAATATAACCACT+AGG - Chr2:74880334-74880353 None:intergenic 45.0%
TCTGCCACATCAATCACCAT+AGG + Chr2:74881900-74881919 MsG0280010769.01.T01:three_prime_UTR 45.0%
TGATGTGGCAGGGCAAAATA+TGG + Chr2:74881731-74881750 MsG0280010769.01.T01:intron 45.0%
TGTGCCGTGATCAATGGAAT+TGG + Chr2:74881765-74881784 MsG0280010769.01.T01:CDS 45.0%
! AAAACCGTTCTAGTTACCGG+CGG + Chr2:74878441-74878460 MsG0280010769.01.T01:CDS 45.0%
! ATATTCTGGGTGTGGTTTGG+TGG + Chr2:74881654-74881673 MsG0280010769.01.T01:intron 45.0%
! CATACCTTGGTTCGTCCATA+TGG - Chr2:74879958-74879977 None:intergenic 45.0%
! GATGGTAAGAGCTTTTGAGC+AGG + Chr2:74880955-74880974 MsG0280010769.01.T01:CDS 45.0%
! GTTCTTCAGCTTTTACTCGG+CGG + Chr2:74878489-74878508 MsG0280010769.01.T01:CDS 45.0%
! TTAAGGGTGTGTTTGCGAGT+TGG - Chr2:74879181-74879200 None:intergenic 45.0%
! TTTTGAGCAGGCATCTGGAA+AGG + Chr2:74880967-74880986 MsG0280010769.01.T01:CDS 45.0%
!! TATGGGTTTGCTGCTGAAAG+AGG - Chr2:74879940-74879959 None:intergenic 45.0%
!! TGGGCTAGCAAAAACCCTTA+CGG + Chr2:74881785-74881804 MsG0280010769.01.T01:CDS 45.0%
!!! GGGAACATCAGTTTTGGAGA+TGG + Chr2:74880937-74880956 MsG0280010769.01.T01:CDS 45.0%
ATATTGGGGAGGATCCTCAC+GGG + Chr2:74880341-74880360 MsG0280010769.01.T01:CDS 50.0%
CAGGAGATCCATAGCCGTAA+GGG - Chr2:74881802-74881821 None:intergenic 50.0%
CCCTAGTGGTTATATTGGGG+AGG + Chr2:74880330-74880349 MsG0280010769.01.T01:CDS 50.0%
CTTCGGCCAACCATATACAG+TGG - Chr2:74879893-74879912 None:intergenic 50.0%
GGCTGCTGCTACTATTTGAG+TGG - Chr2:74879432-74879451 None:intergenic 50.0%
TACATGCACCCAACAGAACC+AGG - Chr2:74880580-74880599 None:intergenic 50.0%
TCAGGAGATCCATAGCCGTA+AGG - Chr2:74881803-74881822 None:intergenic 50.0%
TTGGAAGTCATGGCTGCTCA+TGG + Chr2:74879740-74879759 MsG0280010769.01.T01:CDS 50.0%
TTTCAGCATCACCAGGCCTA+CGG - Chr2:74881478-74881497 None:intergenic 50.0%
! AGAGCTTTTGAGCAGGCATC+TGG + Chr2:74880962-74880981 MsG0280010769.01.T01:CDS 50.0%
! CACTGTATATGGTTGGCCGA+AGG + Chr2:74879891-74879910 MsG0280010769.01.T01:CDS 50.0%
! TGTATATGGTTGGCCGAAGG+AGG + Chr2:74879894-74879913 MsG0280010769.01.T01:CDS 50.0%
!! ACTGTCTGTCCTGGTTCTGT+TGG + Chr2:74880568-74880587 MsG0280010769.01.T01:intron 50.0%
!! CGTCCTGCACTGACAGTTTT+TGG + Chr2:74880412-74880431 MsG0280010769.01.T01:CDS 50.0%
!! CTGTCTGTCCTGGTTCTGTT+GGG + Chr2:74880569-74880588 MsG0280010769.01.T01:intron 50.0%
CATGCTGTGTGTGTCTGGAC+AGG + Chr2:74880884-74880903 MsG0280010769.01.T01:intron 55.0%
GCTTCAATGGCTTCTCGCGT+CGG + Chr2:74878297-74878316 MsG0280010769.01.T01:exon 55.0%
GGCTGCTCATGGATGCAAGA+AGG + Chr2:74879751-74879770 MsG0280010769.01.T01:CDS 55.0%
GGTGTGGCTACCGATGTAAC+CGG - Chr2:74878469-74878488 None:intergenic 55.0%
! TCTCGCGTCGGCATCACTAA+TGG + Chr2:74878309-74878328 MsG0280010769.01.T01:CDS 55.0%
CACTAGGGTGTGCACCCACT+GGG - Chr2:74880318-74880337 None:intergenic 60.0%
CTACGGCCAGCCTTCACAAG+TGG - Chr2:74881461-74881480 None:intergenic 60.0%
GCAGGTAGACATCCGGGACA+GGG + Chr2:74879291-74879310 MsG0280010769.01.T01:intron 60.0%
GCCACTGCAGGTAGACATCC+GGG + Chr2:74879285-74879304 MsG0280010769.01.T01:intron 60.0%
GGCACCGCCGGTAACTAGAA+CGG - Chr2:74878448-74878467 None:intergenic 60.0%
GGCCACTGCAGGTAGACATC+CGG + Chr2:74879284-74879303 MsG0280010769.01.T01:intron 60.0%
TCCCGGATGTCTACCTGCAG+TGG - Chr2:74879289-74879308 None:intergenic 60.0%
TGCAGGTAGACATCCGGGAC+AGG + Chr2:74879290-74879309 MsG0280010769.01.T01:intron 60.0%
! CACTTGTGAAGGCTGGCCGT+AGG + Chr2:74881459-74881478 MsG0280010769.01.T01:CDS 60.0%
! GTTCTAGTTACCGGCGGTGC+CGG + Chr2:74878447-74878466 MsG0280010769.01.T01:CDS 60.0%
ACCGATGTAACCGGCACCGC+CGG - Chr2:74878460-74878479 None:intergenic 65.0%
CCACTAGGGTGTGCACCCAC+TGG - Chr2:74880319-74880338 None:intergenic 65.0%
CCAGTGGGTGCACACCCTAG+TGG + Chr2:74880316-74880335 MsG0280010769.01.T01:CDS 65.0%
GCTCAAGTGCAGCCCTGTCC+CGG - Chr2:74879306-74879325 None:intergenic 65.0%
!! ACCGGCGGTGCCGGTTACAT+CGG + Chr2:74878456-74878475 MsG0280010769.01.T01:CDS 65.0%
! GTGAAGGCTGGCCGTAGGCC+TGG + Chr2:74881464-74881483 MsG0280010769.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 74878187 74882207 74878187 ID=MsG0280010769.01;Name=MsG0280010769.01
Chr2 mRNA 74878187 74882207 74878187 ID=MsG0280010769.01.T01;Parent=MsG0280010769.01;Name=MsG0280010769.01.T01;_AED=0.45;_eAED=0.45;_QI=116|1|1|1|1|1|9|372|392
Chr2 exon 74878187 74878617 74878187 ID=MsG0280010769.01.T01:exon:7383;Parent=MsG0280010769.01.T01
Chr2 exon 74879295 74879344 74879295 ID=MsG0280010769.01.T01:exon:7384;Parent=MsG0280010769.01.T01
Chr2 exon 74879637 74879772 74879637 ID=MsG0280010769.01.T01:exon:7385;Parent=MsG0280010769.01.T01
Chr2 exon 74879871 74879972 74879871 ID=MsG0280010769.01.T01:exon:7386;Parent=MsG0280010769.01.T01
Chr2 exon 74880238 74880465 74880238 ID=MsG0280010769.01.T01:exon:7387;Parent=MsG0280010769.01.T01
Chr2 exon 74880677 74880755 74880677 ID=MsG0280010769.01.T01:exon:7388;Parent=MsG0280010769.01.T01
Chr2 exon 74880906 74880988 74880906 ID=MsG0280010769.01.T01:exon:7389;Parent=MsG0280010769.01.T01
Chr2 exon 74881452 74881543 74881452 ID=MsG0280010769.01.T01:exon:7390;Parent=MsG0280010769.01.T01
Chr2 exon 74881742 74882207 74881742 ID=MsG0280010769.01.T01:exon:7391;Parent=MsG0280010769.01.T01
Chr2 five_prime_UTR 74878187 74878302 74878187 ID=MsG0280010769.01.T01:five_prime_utr;Parent=MsG0280010769.01.T01
Chr2 CDS 74878303 74878617 74878303 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 CDS 74879295 74879344 74879295 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 CDS 74879637 74879772 74879637 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 CDS 74879871 74879972 74879871 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 CDS 74880238 74880465 74880238 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 CDS 74880677 74880755 74880677 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 CDS 74880906 74880988 74880906 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 CDS 74881452 74881543 74881452 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 CDS 74881742 74881835 74881742 ID=MsG0280010769.01.T01:cds;Parent=MsG0280010769.01.T01
Chr2 three_prime_UTR 74881836 74882207 74881836 ID=MsG0280010769.01.T01:three_prime_utr;Parent=MsG0280010769.01.T01
Gene Sequence

>MsG0280010769.01.T01

ATGGCTTCTCGCGTCGGCATCACTAATGGCACCTCTTCTTATTTAAACTCTTCACGTTTTCTATCACCTTCTAAGAATTCTTCGTTCCAAACCCAAAACGGTAGTAATTCTAATTCTGCTTCTCTCATGACTCAAAACAAAACCGTTCTAGTTACCGGCGGTGCCGGTTACATCGGTAGCCACACCGTTCTTCAGCTTTTACTCGGCGGTTTCAAAACGGTTATCGTTGATAATCTTGATAATTCTTCTGAAGTTGCTGTTCATAGAGTTAAGGAACTCGCTGCTGAATTTGGGAATAACCTCAATTTTCACAAGGTAGACATCCGGGACAGGGCTGCACTTGAGCAAATTTTTGCTTCCACAAAGTTTGATGCAGTTATACATTTTGCTGGAATGAAAGCAGTGGGTGAAAGTGTGCAGAAACCGTTACTCTACTACAACAACAACTTGATTGGGACAATCACTCTTTTGGAAGTCATGGCTGCTCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACTGTATATGGTTGGCCGAAGGAGGTTCCATGTACTGAAGAGTTTCCTCTTTCAGCAGCAAACCCATATGGACGAACCAAGCTTACTATTGAAGAAATCTGTCGTGACGTCAATCGTGCTGATTCAGATTGGAAAATAATGTTATTGAGATACTTCAACCCAGTGGGTGCACACCCTAGTGGTTATATTGGGGAGGATCCTCACGGGATTCCAAATAATCTTATGCCATTTATTCAGCAAGTAGCGGTTGGCAGACGTCCTGCACTGACAGTTTTTGGAAATGATTATAATACAGTTGATGGCACTGGGGTTCGGGATTACATTCATGTTGTTGATTTAGCTGATGGCCATATTGCTGCATTGCATAAACTAGAAGAAGCTGACATAGGCTGTGACGTTTATAACTTAGGGACAGGAAAGGGAACATCAGTTTTGGAGATGGTAAGAGCTTTTGAGCAGGCATCTGGAAAGAAAATTCCACTTGTGAAGGCTGGCCGTAGGCCTGGTGATGCTGAAATTGTTTATGCATCCACAAAAAAAGCTGAAAGAGAACTCAAGTGGAAGGCAAAATATGGAATTGATGAAATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTACGGCTATGGATCTCCTGATTCCACAGATTAA
Protein sequence

>MsG0280010769.01.T01

MASRVGITNGTSSYLNSSRFLSPSKNSSFQTQNGSNSNSASLMTQNKTVLVTGGAGYIGSHTVLQLLLGGFKTVIVDNLDNSSEVAVHRVKELAAEFGNNLNFHKVDIRDRAALEQIFASTKFDAVIHFAGMKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLTIEEICRDVNRADSDWKIMLLRYFNPVGAHPSGYIGEDPHGIPNNLMPFIQQVAVGRRPALTVFGNDYNTVDGTGVRDYIHVVDLADGHIAALHKLEEADIGCDVYNLGTGKGTSVLEMVRAFEQASGKKIPLVKAGRRPGDAEIVYASTKKAERELKWKAKYGIDEMCRDQWNWASKNPYGYGSPDSTD*