Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010770.01.T01 | XP_003610979.1 | 95.415 | 349 | 16 | 0 | 9 | 357 | 1 | 349 | 0 | 694 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010770.01.T01 | O65781 | 86.857 | 350 | 45 | 1 | 9 | 357 | 1 | 350 | 0 | 636 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010770.01.T01 | G7K9B2 | 95.415 | 349 | 16 | 0 | 9 | 357 | 1 | 349 | 0.0 | 694 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0480020932.01 | MsG0280010770.01 | PPI |
MsG0880047773.01 | MsG0280010770.01 | PPI |
MsG0280010770.01 | MsG0580024333.01 | PPI |
MsG0280010769.01 | MsG0280010770.01 | PPI |
MsG0280010770.01 | MsG0580024334.01 | PPI |
MsG0280010770.01 | MsG0280007789.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010770.01.T01 | MTR_5g009160 | 95.415 | 349 | 16 | 0 | 9 | 357 | 1 | 349 | 0.0 | 694 |
MsG0280010770.01.T01 | MTR_5g009170 | 90.368 | 353 | 34 | 0 | 5 | 357 | 40 | 392 | 0.0 | 679 |
MsG0280010770.01.T01 | MTR_8g099535 | 82.948 | 346 | 59 | 0 | 9 | 354 | 1 | 346 | 0.0 | 610 |
MsG0280010770.01.T01 | MTR_5g009160 | 94.909 | 275 | 14 | 0 | 83 | 357 | 12 | 286 | 0.0 | 548 |
MsG0280010770.01.T01 | MTR_8g096880 | 65.429 | 350 | 118 | 3 | 7 | 353 | 1 | 350 | 6.83e-171 | 479 |
MsG0280010770.01.T01 | MTR_4g134490 | 65.689 | 341 | 115 | 2 | 12 | 350 | 25 | 365 | 1.92e-169 | 477 |
MsG0280010770.01.T01 | MTR_4g134490 | 64.553 | 347 | 115 | 3 | 12 | 350 | 25 | 371 | 1.01e-166 | 470 |
MsG0280010770.01.T01 | MTR_8g096880 | 64.706 | 323 | 112 | 2 | 7 | 327 | 1 | 323 | 2.56e-153 | 434 |
MsG0280010770.01.T01 | MTR_5g009160 | 90.667 | 225 | 21 | 0 | 74 | 298 | 3 | 227 | 1.04e-150 | 424 |
MsG0280010770.01.T01 | MTR_8g096880 | 65.398 | 289 | 98 | 2 | 12 | 298 | 6 | 294 | 6.66e-138 | 394 |
MsG0280010770.01.T01 | MTR_8g089180 | 41.761 | 352 | 183 | 6 | 14 | 354 | 73 | 413 | 7.38e-83 | 258 |
MsG0280010770.01.T01 | MTR_8g089180 | 41.761 | 352 | 183 | 6 | 14 | 354 | 73 | 413 | 7.38e-83 | 258 |
MsG0280010770.01.T01 | MTR_2g032100 | 40.857 | 350 | 185 | 6 | 14 | 352 | 73 | 411 | 8.37e-81 | 253 |
MsG0280010770.01.T01 | MTR_2g032100 | 42.268 | 194 | 110 | 2 | 14 | 207 | 73 | 264 | 1.65e-44 | 155 |
MsG0280010770.01.T01 | MTR_1g009600 | 29.630 | 351 | 206 | 14 | 12 | 351 | 5 | 325 | 3.54e-25 | 107 |
MsG0280010770.01.T01 | MTR_8g099285 | 83.333 | 54 | 9 | 0 | 243 | 296 | 3 | 56 | 5.02e-24 | 94.0 |
MsG0280010770.01.T01 | MTR_0034s0060 | 28.205 | 351 | 211 | 14 | 12 | 351 | 137 | 457 | 4.16e-22 | 98.2 |
MsG0280010770.01.T01 | MTR_2g073240 | 27.350 | 351 | 214 | 14 | 12 | 351 | 19 | 339 | 1.42e-20 | 93.6 |
MsG0280010770.01.T01 | MTR_0354s0040 | 26.966 | 356 | 212 | 13 | 13 | 344 | 83 | 414 | 1.01e-19 | 90.1 |
MsG0280010770.01.T01 | MTR_4g102270 | 26.912 | 353 | 210 | 13 | 12 | 342 | 93 | 419 | 2.11e-19 | 89.4 |
MsG0280010770.01.T01 | MTR_4g129820 | 26.836 | 354 | 224 | 13 | 13 | 351 | 96 | 429 | 2.14e-19 | 89.4 |
MsG0280010770.01.T01 | MTR_4g024600 | 26.136 | 352 | 220 | 12 | 13 | 344 | 102 | 433 | 9.14e-19 | 87.4 |
MsG0280010770.01.T01 | MTR_3g084090 | 27.089 | 347 | 215 | 13 | 13 | 342 | 100 | 425 | 2.05e-18 | 86.7 |
MsG0280010770.01.T01 | MTR_5g011940 | 25.000 | 352 | 216 | 13 | 13 | 342 | 91 | 416 | 1.34e-17 | 84.0 |
MsG0280010770.01.T01 | MTR_1g088480 | 26.235 | 324 | 189 | 14 | 14 | 329 | 120 | 401 | 1.12e-15 | 78.2 |
MsG0280010770.01.T01 | MTR_4g120030 | 26.506 | 332 | 192 | 16 | 12 | 334 | 111 | 399 | 1.31e-14 | 75.1 |
MsG0280010770.01.T01 | MTR_1g067530 | 26.420 | 352 | 200 | 15 | 14 | 334 | 114 | 437 | 2.25e-14 | 74.3 |
MsG0280010770.01.T01 | MTR_4g063600 | 27.647 | 340 | 195 | 16 | 5 | 334 | 25 | 323 | 5.97e-14 | 72.4 |
MsG0280010770.01.T01 | MTR_7g108490 | 24.929 | 353 | 215 | 14 | 4 | 346 | 5 | 317 | 4.79e-12 | 66.6 |
MsG0280010770.01.T01 | MTR_7g108490 | 25.215 | 349 | 211 | 14 | 8 | 346 | 8 | 316 | 6.34e-12 | 66.2 |
MsG0280010770.01.T01 | MTR_2g096660 | 26.061 | 330 | 206 | 12 | 5 | 329 | 31 | 327 | 2.31e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010770.01.T01 | AT4G10960 | 81.105 | 344 | 65 | 0 | 9 | 352 | 1 | 344 | 0.0 | 592 |
MsG0280010770.01.T01 | AT1G64440 | 78.488 | 344 | 73 | 1 | 14 | 356 | 5 | 348 | 0.0 | 577 |
MsG0280010770.01.T01 | AT4G23920 | 80.952 | 336 | 64 | 0 | 12 | 347 | 3 | 338 | 0.0 | 577 |
MsG0280010770.01.T01 | AT1G63180 | 65.982 | 341 | 114 | 2 | 12 | 350 | 7 | 347 | 2.07e-172 | 484 |
MsG0280010770.01.T01 | AT1G12780 | 64.809 | 341 | 118 | 2 | 12 | 350 | 7 | 347 | 1.65e-168 | 474 |
MsG0280010770.01.T01 | AT1G63180 | 63.729 | 295 | 104 | 3 | 12 | 303 | 7 | 301 | 3.24e-139 | 398 |
MsG0280010770.01.T01 | AT1G30620 | 42.655 | 354 | 181 | 6 | 14 | 356 | 73 | 415 | 6.17e-84 | 261 |
MsG0280010770.01.T01 | AT1G30620 | 42.655 | 354 | 181 | 6 | 14 | 356 | 73 | 415 | 6.17e-84 | 261 |
MsG0280010770.01.T01 | AT1G30620 | 42.655 | 354 | 181 | 6 | 14 | 356 | 73 | 415 | 6.17e-84 | 261 |
MsG0280010770.01.T01 | AT1G30620 | 42.655 | 354 | 181 | 6 | 14 | 356 | 73 | 415 | 6.17e-84 | 261 |
MsG0280010770.01.T01 | AT1G30620 | 42.655 | 354 | 181 | 6 | 14 | 356 | 72 | 414 | 6.47e-84 | 261 |
MsG0280010770.01.T01 | AT5G44480 | 40.571 | 350 | 186 | 6 | 14 | 352 | 73 | 411 | 3.91e-81 | 253 |
MsG0280010770.01.T01 | AT5G44480 | 40.571 | 350 | 186 | 6 | 14 | 352 | 73 | 411 | 3.91e-81 | 253 |
MsG0280010770.01.T01 | AT5G44480 | 40.571 | 350 | 186 | 6 | 14 | 352 | 73 | 411 | 3.91e-81 | 253 |
MsG0280010770.01.T01 | AT5G44480 | 40.571 | 350 | 186 | 6 | 14 | 352 | 97 | 435 | 8.35e-81 | 253 |
MsG0280010770.01.T01 | AT4G20460 | 40.857 | 350 | 185 | 6 | 14 | 352 | 72 | 410 | 3.54e-79 | 248 |
MsG0280010770.01.T01 | AT1G30620 | 46.907 | 194 | 101 | 2 | 14 | 207 | 73 | 264 | 5.31e-51 | 172 |
MsG0280010770.01.T01 | AT2G34850 | 41.810 | 232 | 128 | 4 | 125 | 352 | 1 | 229 | 1.05e-48 | 164 |
MsG0280010770.01.T01 | AT2G34850 | 41.810 | 232 | 128 | 4 | 125 | 352 | 1 | 229 | 1.05e-48 | 164 |
MsG0280010770.01.T01 | AT2G34850 | 41.810 | 232 | 128 | 4 | 125 | 352 | 1 | 229 | 1.05e-48 | 164 |
MsG0280010770.01.T01 | AT2G34850 | 41.810 | 232 | 128 | 4 | 125 | 352 | 1 | 229 | 1.05e-48 | 164 |
MsG0280010770.01.T01 | AT1G53500 | 27.635 | 351 | 213 | 14 | 12 | 351 | 9 | 329 | 4.74e-24 | 103 |
MsG0280010770.01.T01 | AT4G00110 | 27.976 | 336 | 196 | 13 | 13 | 327 | 92 | 402 | 1.73e-21 | 95.5 |
MsG0280010770.01.T01 | AT3G14790 | 27.350 | 351 | 214 | 13 | 12 | 351 | 7 | 327 | 2.90e-21 | 95.5 |
MsG0280010770.01.T01 | AT3G14790 | 27.350 | 351 | 214 | 13 | 12 | 351 | 10 | 330 | 2.99e-21 | 95.5 |
MsG0280010770.01.T01 | AT1G78570 | 27.350 | 351 | 214 | 14 | 12 | 351 | 7 | 327 | 3.78e-21 | 95.5 |
MsG0280010770.01.T01 | AT2G45310 | 26.781 | 351 | 211 | 13 | 13 | 342 | 98 | 423 | 1.03e-20 | 93.2 |
MsG0280010770.01.T01 | AT1G02000 | 27.381 | 336 | 198 | 13 | 13 | 327 | 93 | 403 | 1.92e-20 | 92.4 |
MsG0280010770.01.T01 | AT3G23820 | 27.378 | 347 | 214 | 12 | 13 | 342 | 113 | 438 | 1.70e-18 | 86.7 |
MsG0280010770.01.T01 | AT4G12250 | 26.346 | 353 | 210 | 13 | 13 | 342 | 97 | 422 | 5.59e-17 | 82.0 |
MsG0280010770.01.T01 | AT2G47650 | 27.219 | 338 | 195 | 16 | 14 | 338 | 123 | 422 | 2.43e-16 | 80.5 |
MsG0280010770.01.T01 | AT2G47650 | 27.628 | 333 | 194 | 16 | 14 | 334 | 123 | 420 | 3.50e-16 | 79.7 |
MsG0280010770.01.T01 | AT4G30440 | 26.316 | 361 | 219 | 15 | 13 | 352 | 89 | 423 | 8.73e-16 | 78.6 |
MsG0280010770.01.T01 | AT3G62830 | 26.269 | 335 | 202 | 14 | 14 | 338 | 121 | 420 | 1.23e-15 | 78.2 |
MsG0280010770.01.T01 | AT3G62830 | 26.269 | 335 | 202 | 14 | 14 | 338 | 121 | 420 | 1.23e-15 | 78.2 |
MsG0280010770.01.T01 | AT3G53520 | 25.460 | 326 | 202 | 13 | 14 | 334 | 122 | 411 | 2.49e-14 | 74.3 |
MsG0280010770.01.T01 | AT3G46440 | 26.488 | 336 | 209 | 13 | 4 | 334 | 21 | 323 | 7.89e-13 | 69.3 |
MsG0280010770.01.T01 | AT3G46440 | 26.488 | 336 | 209 | 13 | 4 | 334 | 21 | 323 | 7.89e-13 | 69.3 |
MsG0280010770.01.T01 | AT5G59290 | 26.786 | 336 | 208 | 13 | 4 | 334 | 22 | 324 | 1.37e-12 | 68.6 |
MsG0280010770.01.T01 | AT5G59290 | 26.786 | 336 | 208 | 13 | 4 | 334 | 37 | 339 | 1.60e-12 | 68.2 |
MsG0280010770.01.T01 | AT5G59290 | 26.380 | 326 | 202 | 12 | 14 | 334 | 25 | 317 | 5.09e-12 | 66.6 |
MsG0280010770.01.T01 | AT5G59290 | 26.994 | 326 | 200 | 13 | 14 | 334 | 3 | 295 | 5.54e-12 | 66.2 |
MsG0280010770.01.T01 | AT3G53520 | 26.939 | 245 | 145 | 10 | 14 | 253 | 122 | 337 | 1.07e-11 | 65.9 |
Find 97 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGGAACTCGCCGGTGAATT+TGG | 0.176198 | 2:+74883045 | MsG0280010770.01.T01:CDS |
TACAAAACTGTGCTCGTTAC+TGG | 0.305249 | 2:+74882910 | MsG0280010770.01.T01:CDS |
CACACCCTAGTGGTTATATT+GGG | 0.312315 | 2:+74884817 | MsG0280010770.01.T01:CDS |
CATACCTTCGTTCGTCCATA+TGG | 0.315017 | 2:-74884603 | None:intergenic |
TCATCTTCGGCCACTGTATA+TGG | 0.319590 | 2:+74884528 | MsG0280010770.01.T01:CDS |
GCACACCCTAGTGGTTATAT+TGG | 0.324849 | 2:+74884816 | MsG0280010770.01.T01:CDS |
GATTGGGACAATCACTCTAT+TGG | 0.343819 | 2:+74884021 | MsG0280010770.01.T01:CDS |
TACTACAACAACAACTTGAT+TGG | 0.354486 | 2:+74884004 | MsG0280010770.01.T01:CDS |
TGATGTGGCAGGGCAAAATA+TGG | 0.355594 | 2:+74886093 | MsG0280010770.01.T01:intron |
TCGGTACATGGAACCTCCTT+TGG | 0.357416 | 2:-74884555 | None:intergenic |
AGGAAAAGGAACATCAGTTT+TGG | 0.357526 | 2:+74885475 | MsG0280010770.01.T01:CDS |
AGGAACTCGCCGGTGAATTT+GGG | 0.357688 | 2:+74883046 | MsG0280010770.01.T01:CDS |
TGCAGGCAGATCTCCGGGAC+AGG | 0.377208 | 2:+74883694 | MsG0280010770.01.T01:intron |
ATGAATGGCATGAGATTGTT+TGG | 0.393421 | 2:-74884858 | None:intergenic |
GGTTGTGAGGTTTATAACTT+AGG | 0.394071 | 2:+74885449 | MsG0280010770.01.T01:intron |
TATAATACAGTTGATGGTAC+TGG | 0.401528 | 2:+74884933 | MsG0280010770.01.T01:CDS |
CGTCACTGCAGGCAGATCTC+CGG | 0.407508 | 2:+74883688 | MsG0280010770.01.T01:intron |
TCAGCTTGTGTTCTCATCTT+CGG | 0.414089 | 2:+74884515 | MsG0280010770.01.T01:intron |
AATGATTATAATACAGTTGA+TGG | 0.420135 | 2:+74884927 | MsG0280010770.01.T01:CDS |
TGTGCCGTGATCAATGGAAT+TGG | 0.420702 | 2:+74886127 | MsG0280010770.01.T01:CDS |
AATTGCCATTCACAGAGTTA+AGG | 0.433379 | 2:+74883026 | MsG0280010770.01.T01:CDS |
TTCATCGTGCCGAGCCAGAC+TGG | 0.434892 | 2:+74884757 | MsG0280010770.01.T01:CDS |
CCCTTATGGCTATGGATCTC+CGG | 0.439689 | 2:+74886161 | MsG0280010770.01.T01:CDS |
ACTACAACAACAACTTGATT+GGG | 0.462398 | 2:+74884005 | MsG0280010770.01.T01:CDS |
CATGTTGTTGATTTAGCAGA+TGG | 0.468188 | 2:+74885293 | MsG0280010770.01.T01:CDS |
CCACTAGGGTGTGCACCCAC+TGG | 0.468983 | 2:-74884807 | None:intergenic |
TATAACTTAGGGACAGGAAA+AGG | 0.472821 | 2:+74885461 | MsG0280010770.01.T01:CDS |
GGTGTGGCTACCAATGTAAC+CGG | 0.472958 | 2:-74882938 | None:intergenic |
AAAGGTTAATCCGTGGAATC+CGG | 0.478829 | 2:-74886180 | None:intergenic |
CCGGAGATCCATAGCCATAA+GGG | 0.479040 | 2:-74886161 | None:intergenic |
ACCGCTACTTGCTGAATGAA+TGG | 0.479414 | 2:-74884873 | None:intergenic |
GTTGTGAGGTTTATAACTTA+GGG | 0.479882 | 2:+74885450 | MsG0280010770.01.T01:CDS |
GTGAAGGCTGGCCGTAGACC+TGG | 0.480489 | 2:+74885806 | MsG0280010770.01.T01:CDS |
ATGAAATGTGCCGTGATCAA+TGG | 0.481865 | 2:+74886121 | MsG0280010770.01.T01:CDS |
TTGTCAGCAGCTAACCCATA+TGG | 0.484701 | 2:+74884588 | MsG0280010770.01.T01:CDS |
GAGGTTTATAACTTAGGGAC+AGG | 0.484709 | 2:+74885455 | MsG0280010770.01.T01:CDS |
TGTTTATGCATCCACAGAAA+AGG | 0.487436 | 2:+74885841 | MsG0280010770.01.T01:CDS |
TCCGGAGATCCATAGCCATA+AGG | 0.490760 | 2:-74886162 | None:intergenic |
ATAATACAGTTGATGGTACT+GGG | 0.493443 | 2:+74884934 | MsG0280010770.01.T01:CDS |
GTCACTGCAGGCAGATCTCC+GGG | 0.493472 | 2:+74883689 | MsG0280010770.01.T01:intron |
ATACCTTCGTTCGTCCATAT+GGG | 0.499643 | 2:-74884602 | None:intergenic |
CACTAGGGTGTGCACCCACT+GGG | 0.505607 | 2:-74884806 | None:intergenic |
TCAGAAAATTCCACTTGTGA+AGG | 0.507254 | 2:+74885790 | MsG0280010770.01.T01:intron |
TGCTGACAAAGGAAGCTCTT+CGG | 0.509520 | 2:-74884574 | None:intergenic |
GCTCTAGAGCAGCCCTGTCC+CGG | 0.510833 | 2:-74883707 | None:intergenic |
TTGGAAGTCATGGCTGCTCA+TGG | 0.514550 | 2:+74884040 | MsG0280010770.01.T01:CDS |
AAAGGAAGCTCTTCGGTACA+TGG | 0.515925 | 2:-74884567 | None:intergenic |
AGCAAGTAGCGGTGGGCAGA+CGG | 0.523432 | 2:+74884883 | MsG0280010770.01.T01:CDS |
AAAATTCCACTTGTGAAGGC+TGG | 0.523612 | 2:+74885794 | MsG0280010770.01.T01:CDS |
AGGCTGAAAGAGAACTTAAG+TGG | 0.529244 | 2:+74885861 | MsG0280010770.01.T01:CDS |
ACTGGTGGTGCCGGTTACAT+TGG | 0.535200 | 2:+74882928 | MsG0280010770.01.T01:CDS |
ACCGTTCTTCAGCTCTTACT+CGG | 0.540014 | 2:+74882958 | MsG0280010770.01.T01:CDS |
GTGCCGTGATCAATGGAATT+GGG | 0.542969 | 2:+74886128 | MsG0280010770.01.T01:CDS |
GTGCTCGTTACTGGTGGTGC+CGG | 0.544338 | 2:+74882919 | MsG0280010770.01.T01:CDS |
TTTCAGCATCGCCAGGTCTA+CGG | 0.546507 | 2:-74885817 | None:intergenic |
GAGGTTATTCCCAAATTCAC+CGG | 0.555981 | 2:-74883055 | None:intergenic |
GCAGGCAGATCTCCGGGACA+GGG | 0.561677 | 2:+74883695 | MsG0280010770.01.T01:intron |
TTGTTGTTGTAGTAGAGTAA+CGG | 0.566441 | 2:-74883995 | None:intergenic |
GAGTTCCTTAACTCTGTGAA+TGG | 0.566778 | 2:-74883031 | None:intergenic |
CTATGGATCTCCGGATTCCA+CGG | 0.570990 | 2:+74886170 | MsG0280010770.01.T01:CDS |
TAAACAATTTCAGCATCGCC+AGG | 0.571797 | 2:-74885824 | None:intergenic |
CACTGTATATGGTTGGCCAA+AGG | 0.573032 | 2:+74884539 | MsG0280010770.01.T01:CDS |
AATCACTCTATTGGAAGTCA+TGG | 0.575119 | 2:+74884030 | MsG0280010770.01.T01:CDS |
CTTCGGCCACTGTATATGGT+TGG | 0.580356 | 2:+74884532 | MsG0280010770.01.T01:CDS |
GGCTGCTCATGGATGCAAGA+AGG | 0.588720 | 2:+74884051 | MsG0280010770.01.T01:CDS |
CTACGGCCAGCCTTCACAAG+TGG | 0.588819 | 2:-74885800 | None:intergenic |
AAACTAGAAGAAGCTGACAT+AGG | 0.589751 | 2:+74885335 | MsG0280010770.01.T01:CDS |
TCGAGATACTTTAACCCAGT+GGG | 0.592670 | 2:+74884792 | MsG0280010770.01.T01:CDS |
TAACTATAAAGGTTAATCCG+TGG | 0.595099 | 2:-74886187 | None:intergenic |
ATTCATTCAGCAAGTAGCGG+TGG | 0.595535 | 2:+74884875 | MsG0280010770.01.T01:CDS |
TGTATATGGTTGGCCAAAGG+AGG | 0.596425 | 2:+74884542 | MsG0280010770.01.T01:CDS |
ATCAAGATTATCAACGACTA+CGG | 0.596621 | 2:-74882992 | None:intergenic |
TTTGCTGGACTAAAAGCAGT+AGG | 0.603031 | 2:+74883956 | MsG0280010770.01.T01:CDS |
TCCTCCCCAATATAACCACT+AGG | 0.607338 | 2:-74884822 | None:intergenic |
TTCATTCAGCAAGTAGCGGT+GGG | 0.609126 | 2:+74884876 | MsG0280010770.01.T01:CDS |
TCTGTGAATGGCAATTTCTG+AGG | 0.613372 | 2:-74883019 | None:intergenic |
TAGCCCAATTCCATTGATCA+CGG | 0.615843 | 2:-74886131 | None:intergenic |
CCCTAGTGGTTATATTGGGG+AGG | 0.615928 | 2:+74884821 | MsG0280010770.01.T01:CDS |
CACAGAGTTAAGGAACTCGC+CGG | 0.619501 | 2:+74883036 | MsG0280010770.01.T01:CDS |
TATGGGTTAGCTGCTGACAA+AGG | 0.620844 | 2:-74884585 | None:intergenic |
GTGTGCGTGCACAGGTTGTG+AGG | 0.628364 | 2:+74885436 | MsG0280010770.01.T01:intron |
ATCGAGATACTTTAACCCAG+TGG | 0.629627 | 2:+74884791 | MsG0280010770.01.T01:CDS |
GCCGAGTAAGAGCTGAAGAA+CGG | 0.648191 | 2:-74882959 | None:intergenic |
CCTCCCCAATATAACCACTA+GGG | 0.650185 | 2:-74884821 | None:intergenic |
GAATAACCTCAGCTTTCACA+AGG | 0.652255 | 2:+74883068 | MsG0280010770.01.T01:CDS |
GCCATTCATTCAGCAAGTAG+CGG | 0.658758 | 2:+74884872 | MsG0280010770.01.T01:CDS |
ACACCCTAGTGGTTATATTG+GGG | 0.659441 | 2:+74884818 | MsG0280010770.01.T01:CDS |
AAAACTGTGCTCGTTACTGG+TGG | 0.670461 | 2:+74882913 | MsG0280010770.01.T01:CDS |
AGAGTACCTTGTGAAAGCTG+AGG | 0.670598 | 2:-74883074 | None:intergenic |
CCAGTGGGTGCACACCCTAG+TGG | 0.692830 | 2:+74884807 | MsG0280010770.01.T01:CDS |
CTTTGGCCAACCATATACAG+TGG | 0.696736 | 2:-74884538 | None:intergenic |
TAATACAGTTGATGGTACTG+GGG | 0.702541 | 2:+74884935 | MsG0280010770.01.T01:CDS |
TATATTGGGGAGGATCCTCG+TGG | 0.703546 | 2:+74884831 | MsG0280010770.01.T01:CDS |
TAACCCATATGGACGAACGA+AGG | 0.716445 | 2:+74884599 | MsG0280010770.01.T01:CDS |
AGATTGTTTGGAACTCCACG+AGG | 0.719992 | 2:-74884846 | None:intergenic |
GTAAGAGCTGAAGAACGGTG+TGG | 0.732697 | 2:-74882954 | None:intergenic |
GTTCTTCAGCTCTTACTCGG+CGG | 0.738654 | 2:+74882961 | MsG0280010770.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTTAGAGAATAATATAA+AGG | - | Chr2:74886069-74886088 | None:intergenic | 10.0% |
!! | GAAAATATAGTTAAAAATAT+TGG | - | Chr2:74883669-74883688 | None:intergenic | 10.0% |
!!! | CTTTTATTCATTTATATTGT+AGG | + | Chr2:74883915-74883934 | MsG0280010770.01.T01:intron | 15.0% |
!!! | TGTAGTATTTTTTTATTTTG+TGG | + | Chr2:74883135-74883154 | MsG0280010770.01.T01:intron | 15.0% |
!!! | TGTTCTTTTTTAAAAATGAT+TGG | + | Chr2:74883280-74883299 | MsG0280010770.01.T01:intron | 15.0% |
!!! | TTTTTTTATTTTGTGGATTT+TGG | + | Chr2:74883142-74883161 | MsG0280010770.01.T01:intron | 15.0% |
!! | AATGATTATAATACAGTTGA+TGG | + | Chr2:74884927-74884946 | MsG0280010770.01.T01:CDS | 20.0% |
!! | ACTATGAGTAAATATTTATG+TGG | + | Chr2:74884300-74884319 | MsG0280010770.01.T01:intron | 20.0% |
!! | AGACAAATTGTTTATTTGTT+CGG | + | Chr2:74883513-74883532 | MsG0280010770.01.T01:intron | 20.0% |
!! | AGTTATAATATCAATGATCA+AGG | - | Chr2:74883884-74883903 | None:intergenic | 20.0% |
!! | TAGAAAAAGAAAGAACAAAT+TGG | - | Chr2:74883172-74883191 | None:intergenic | 20.0% |
!! | TATTTGATTCCTAGAATATT+TGG | - | Chr2:74885612-74885631 | None:intergenic | 20.0% |
!! | TCTCTAAATATTATTTGATG+TGG | + | Chr2:74886078-74886097 | MsG0280010770.01.T01:intron | 20.0% |
!! | TTAATATGAACAGATTTCTA+TGG | + | Chr2:74884135-74884154 | MsG0280010770.01.T01:intron | 20.0% |
!! | TTCAAGCAAAATTACAAAAA+AGG | - | Chr2:74885138-74885157 | None:intergenic | 20.0% |
!! | TTTAGAGAATAATATAAAGG+TGG | - | Chr2:74886066-74886085 | None:intergenic | 20.0% |
!!! | TATTTTATTCATTCTACCAA+AGG | + | Chr2:74883568-74883587 | MsG0280010770.01.T01:intron | 20.0% |
!!! | TTGATTTGATGTAATTTTTG+TGG | + | Chr2:74883352-74883371 | MsG0280010770.01.T01:intron | 20.0% |
!!! | TTTTAATTTAATGCTTGTCT+TGG | + | Chr2:74884667-74884686 | MsG0280010770.01.T01:intron | 20.0% |
! | AAATATTATTTGATGTGGCA+GGG | + | Chr2:74886083-74886102 | MsG0280010770.01.T01:intron | 25.0% |
! | AACTCTGTCTTTAATATTCA+TGG | + | Chr2:74885410-74885429 | MsG0280010770.01.T01:intron | 25.0% |
! | AGAAAGCTTAGAACAATATT+TGG | - | Chr2:74883406-74883425 | None:intergenic | 25.0% |
! | ATAAACAAAGTAGCATGATT+GGG | - | Chr2:74885675-74885694 | None:intergenic | 25.0% |
! | ATAGCACTAGATAAAGAATA+GGG | - | Chr2:74885565-74885584 | None:intergenic | 25.0% |
! | ATCAATGGTAAAGAAAACAA+AGG | - | Chr2:74885228-74885247 | None:intergenic | 25.0% |
! | ATTTGTCTCACAATTTGTAA+AGG | - | Chr2:74883501-74883520 | None:intergenic | 25.0% |
! | CAAGTTCTTTATTATTGCTT+GGG | + | Chr2:74884191-74884210 | MsG0280010770.01.T01:intron | 25.0% |
! | CAATATTTAGGCAATTCAAT+TGG | - | Chr2:74884236-74884255 | None:intergenic | 25.0% |
! | GTAACATACATGCAATATTT+AGG | - | Chr2:74884248-74884267 | None:intergenic | 25.0% |
! | TAAATATTATTTGATGTGGC+AGG | + | Chr2:74886082-74886101 | MsG0280010770.01.T01:intron | 25.0% |
! | TATAAACAAAGTAGCATGAT+TGG | - | Chr2:74885676-74885695 | None:intergenic | 25.0% |
! | TATAGCACTAGATAAAGAAT+AGG | - | Chr2:74885566-74885585 | None:intergenic | 25.0% |
! | TCATCTTAATGATACATTCT+AGG | + | Chr2:74886005-74886024 | MsG0280010770.01.T01:intron | 25.0% |
! | TTCAGAATGGCAAATAAATA+CGG | - | Chr2:74885199-74885218 | None:intergenic | 25.0% |
! | TTCTTTACCATTGATCTTAT+TGG | + | Chr2:74885233-74885252 | MsG0280010770.01.T01:intron | 25.0% |
!! | GATAATATTATTTTCCAGTC+TGG | - | Chr2:74884774-74884793 | None:intergenic | 25.0% |
!!! | TATGTTTTTTTTTCCACTCT+AGG | + | Chr2:74883459-74883478 | MsG0280010770.01.T01:intron | 25.0% |
AAATGGCAACCAAATATTCT+AGG | + | Chr2:74885600-74885619 | MsG0280010770.01.T01:intron | 30.0% | |
AAGGTAGTTATGTGTCAAAA+AGG | - | Chr2:74884398-74884417 | None:intergenic | 30.0% | |
ACAAAAAAGGCCAATACAAA+CGG | - | Chr2:74885125-74885144 | None:intergenic | 30.0% | |
ACGAAACAAGCTATTAAGAA+AGG | - | Chr2:74885935-74885954 | None:intergenic | 30.0% | |
ACTACAACAACAACTTGATT+GGG | + | Chr2:74884005-74884024 | MsG0280010770.01.T01:CDS | 30.0% | |
AGAGAATAATATAAAGGTGG+AGG | - | Chr2:74886063-74886082 | None:intergenic | 30.0% | |
ATAGCTAGAGACATGAAAAA+TGG | + | Chr2:74885583-74885602 | MsG0280010770.01.T01:intron | 30.0% | |
ATCAAGATTATCAACGACTA+CGG | - | Chr2:74882995-74883014 | None:intergenic | 30.0% | |
ATGGATAGAAAGAATCTAGA+AGG | - | Chr2:74885639-74885658 | None:intergenic | 30.0% | |
ATTGGGAATTATGGATAAGA+TGG | - | Chr2:74885658-74885677 | None:intergenic | 30.0% | |
CAAATGGATATCTAACTGAT+TGG | + | Chr2:74885904-74885923 | MsG0280010770.01.T01:intron | 30.0% | |
CAGTTATTTAATTGTGACAG+TGG | + | Chr2:74884349-74884368 | MsG0280010770.01.T01:intron | 30.0% | |
CCAAGCAATAATAAAGAACT+TGG | - | Chr2:74884193-74884212 | None:intergenic | 30.0% | |
CCAAGTTCTTTATTATTGCT+TGG | + | Chr2:74884190-74884209 | MsG0280010770.01.T01:intron | 30.0% | |
CTTATTGGATTGTTCTGTTA+GGG | + | Chr2:74885171-74885190 | MsG0280010770.01.T01:intron | 30.0% | |
GAATCATCCAATAAGATCAA+TGG | - | Chr2:74885243-74885262 | None:intergenic | 30.0% | |
GCTCAATGTTATACATGATT+TGG | - | Chr2:74885725-74885744 | None:intergenic | 30.0% | |
GTTGTGAGGTTTATAACTTA+GGG | + | Chr2:74885450-74885469 | MsG0280010770.01.T01:CDS | 30.0% | |
TACTACAACAACAACTTGAT+TGG | + | Chr2:74884004-74884023 | MsG0280010770.01.T01:CDS | 30.0% | |
TGCAGAACTTAAAAACAAGA+AGG | - | Chr2:74884083-74884102 | None:intergenic | 30.0% | |
! | ATTTTTGCTTCCACAAAGTA+AGG | + | Chr2:74883732-74883751 | MsG0280010770.01.T01:intron | 30.0% |
! | TTGTTGTTGTAGTAGAGTAA+CGG | - | Chr2:74883998-74884017 | None:intergenic | 30.0% |
!! | AAGTGTCATTTGCTTTCAAA+TGG | + | Chr2:74885888-74885907 | MsG0280010770.01.T01:intron | 30.0% |
!! | ATAATACAGTTGATGGTACT+GGG | + | Chr2:74884934-74884953 | MsG0280010770.01.T01:CDS | 30.0% |
!! | TACCTTGAAGTGTTTTGTAA+GGG | + | Chr2:74884412-74884431 | MsG0280010770.01.T01:intron | 30.0% |
!! | TATAATACAGTTGATGGTAC+TGG | + | Chr2:74884933-74884952 | MsG0280010770.01.T01:CDS | 30.0% |
AAACTAGAAGAAGCTGACAT+AGG | + | Chr2:74885335-74885354 | MsG0280010770.01.T01:CDS | 35.0% | |
AAAGGAAATCACAGATGCTT+CGG | + | Chr2:74883586-74883605 | MsG0280010770.01.T01:intron | 35.0% | |
AAATGACCAAACTGTGGTTA+AGG | - | Chr2:74885076-74885095 | None:intergenic | 35.0% | |
AACATACTAGCTGTCCTTAT+TGG | + | Chr2:74885156-74885175 | MsG0280010770.01.T01:intron | 35.0% | |
AACTGAGCATCAAAATAGGA+AGG | - | Chr2:74883781-74883800 | None:intergenic | 35.0% | |
AATCACTCTATTGGAAGTCA+TGG | + | Chr2:74884030-74884049 | MsG0280010770.01.T01:CDS | 35.0% | |
AATTGCCATTCACAGAGTTA+AGG | + | Chr2:74883026-74883045 | MsG0280010770.01.T01:CDS | 35.0% | |
ACAAAGGTAGATCTTCAGAA+TGG | - | Chr2:74885212-74885231 | None:intergenic | 35.0% | |
ACTCAACTGAGCATCAAAAT+AGG | - | Chr2:74883785-74883804 | None:intergenic | 35.0% | |
AGTAGCATGATTGGGAATTA+TGG | - | Chr2:74885667-74885686 | None:intergenic | 35.0% | |
ATGAATGGCATGAGATTGTT+TGG | - | Chr2:74884861-74884880 | None:intergenic | 35.0% | |
ATGATTCTCACCTTATTCTC+AGG | + | Chr2:74885256-74885275 | MsG0280010770.01.T01:intron | 35.0% | |
CAAAAAAGGCCAATACAAAC+GGG | - | Chr2:74885124-74885143 | None:intergenic | 35.0% | |
CATATGAAATGACCAAACTG+TGG | - | Chr2:74885082-74885101 | None:intergenic | 35.0% | |
CCTAACAGAACAATCCAATA+AGG | - | Chr2:74885173-74885192 | None:intergenic | 35.0% | |
CCTTATTGGATTGTTCTGTT+AGG | + | Chr2:74885170-74885189 | MsG0280010770.01.T01:intron | 35.0% | |
GAATAATATAAAGGTGGAGG+AGG | - | Chr2:74886060-74886079 | None:intergenic | 35.0% | |
GAGCAAAAAAAAACGTGCAA+GGG | - | Chr2:74883102-74883121 | None:intergenic | 35.0% | |
GGTTGTGAGGTTTATAACTT+AGG | + | Chr2:74885449-74885468 | MsG0280010770.01.T01:intron | 35.0% | |
TATAACTTAGGGACAGGAAA+AGG | + | Chr2:74885461-74885480 | MsG0280010770.01.T01:CDS | 35.0% | |
TCAGAAAATTCCACTTGTGA+AGG | + | Chr2:74885790-74885809 | MsG0280010770.01.T01:intron | 35.0% | |
TGAGCAAAAAAAAACGTGCA+AGG | - | Chr2:74883103-74883122 | None:intergenic | 35.0% | |
TGTTTATGCATCCACAGAAA+AGG | + | Chr2:74885841-74885860 | MsG0280010770.01.T01:CDS | 35.0% | |
TTTCCAAAAATTGTCAGTGC+AGG | - | Chr2:74884909-74884928 | None:intergenic | 35.0% | |
! | AACTATATTTTCGTCACTGC+AGG | + | Chr2:74883677-74883696 | MsG0280010770.01.T01:intron | 35.0% |
! | AGGAAAAGGAACATCAGTTT+TGG | + | Chr2:74885475-74885494 | MsG0280010770.01.T01:CDS | 35.0% |
! | CGGTTACTTAATTTTGCATC+TGG | + | Chr2:74883606-74883625 | MsG0280010770.01.T01:intron | 35.0% |
! | GAAGACTCGATCTTTCATTT+TGG | + | Chr2:74883834-74883853 | MsG0280010770.01.T01:intron | 35.0% |
! | GATACATTCTAGGCATTGTT+TGG | + | Chr2:74886015-74886034 | MsG0280010770.01.T01:intron | 35.0% |
! | TATTATTTTCCAGTCTGGCT+CGG | - | Chr2:74884769-74884788 | None:intergenic | 35.0% |
!! | ACCTTGAAGTGTTTTGTAAG+GGG | + | Chr2:74884413-74884432 | MsG0280010770.01.T01:intron | 35.0% |
!! | CATGTTGTTGATTTAGCAGA+TGG | + | Chr2:74885293-74885312 | MsG0280010770.01.T01:CDS | 35.0% |
!! | CTACCTTGAAGTGTTTTGTA+AGG | + | Chr2:74884411-74884430 | MsG0280010770.01.T01:intron | 35.0% |
!! | TAATACAGTTGATGGTACTG+GGG | + | Chr2:74884935-74884954 | MsG0280010770.01.T01:CDS | 35.0% |
!! | TCTTAATAGCTTGTTTCGTC+TGG | + | Chr2:74885936-74885955 | MsG0280010770.01.T01:intron | 35.0% |
AAAATTCCACTTGTGAAGGC+TGG | + | Chr2:74885794-74885813 | MsG0280010770.01.T01:CDS | 40.0% | |
AATAACGTGTTGTCCTAGAG+TGG | - | Chr2:74883475-74883494 | None:intergenic | 40.0% | |
ACACCCTAGTGGTTATATTG+GGG | + | Chr2:74884818-74884837 | MsG0280010770.01.T01:CDS | 40.0% | |
ACTGTGAGTTCAGAAAGCTA+AGG | + | Chr2:74883235-74883254 | MsG0280010770.01.T01:intron | 40.0% | |
AGCAAAAACCCTTATGGCTA+TGG | + | Chr2:74886153-74886172 | MsG0280010770.01.T01:CDS | 40.0% | |
AGGCTGAAAGAGAACTTAAG+TGG | + | Chr2:74885861-74885880 | MsG0280010770.01.T01:CDS | 40.0% | |
ATACCTTCGTTCGTCCATAT+GGG | - | Chr2:74884605-74884624 | None:intergenic | 40.0% | |
ATATCACATTACCACTGCCT+CGG | - | Chr2:74885376-74885395 | None:intergenic | 40.0% | |
ATCGAGATACTTTAACCCAG+TGG | + | Chr2:74884791-74884810 | MsG0280010770.01.T01:CDS | 40.0% | |
ATGAAATGTGCCGTGATCAA+TGG | + | Chr2:74886121-74886140 | MsG0280010770.01.T01:CDS | 40.0% | |
CACACCCTAGTGGTTATATT+GGG | + | Chr2:74884817-74884836 | MsG0280010770.01.T01:CDS | 40.0% | |
CTGTCATCATCCTTACTTTG+TGG | - | Chr2:74883745-74883764 | None:intergenic | 40.0% | |
GAAGCTGACATAGGTATTCT+TGG | + | Chr2:74885344-74885363 | MsG0280010770.01.T01:intron | 40.0% | |
GAATAACCTCAGCTTTCACA+AGG | + | Chr2:74883068-74883087 | MsG0280010770.01.T01:CDS | 40.0% | |
GACAACTACAAGATAACACG+AGG | - | Chr2:74883862-74883881 | None:intergenic | 40.0% | |
GAGGTTATTCCCAAATTCAC+CGG | - | Chr2:74883058-74883077 | None:intergenic | 40.0% | |
GAGGTTTATAACTTAGGGAC+AGG | + | Chr2:74885455-74885474 | MsG0280010770.01.T01:CDS | 40.0% | |
GAGTTCCTTAACTCTGTGAA+TGG | - | Chr2:74883034-74883053 | None:intergenic | 40.0% | |
GATTGGGACAATCACTCTAT+TGG | + | Chr2:74884021-74884040 | MsG0280010770.01.T01:CDS | 40.0% | |
GGTATTCTTGGATAATTCCG+AGG | + | Chr2:74885356-74885375 | MsG0280010770.01.T01:intron | 40.0% | |
GTGTCAAAAAGGTAACCCAA+GGG | - | Chr2:74884387-74884406 | None:intergenic | 40.0% | |
TAAACAATTTCAGCATCGCC+AGG | - | Chr2:74885827-74885846 | None:intergenic | 40.0% | |
TAATATAAAGGTGGAGGAGG+AGG | - | Chr2:74886057-74886076 | None:intergenic | 40.0% | |
TAATCCCGAACCTGAGAATA+AGG | - | Chr2:74885269-74885288 | None:intergenic | 40.0% | |
TACAAAACTGTGCTCGTTAC+TGG | + | Chr2:74882910-74882929 | MsG0280010770.01.T01:CDS | 40.0% | |
TAGCCCAATTCCATTGATCA+CGG | - | Chr2:74886134-74886153 | None:intergenic | 40.0% | |
TCAGCTTGTGTTCTCATCTT+CGG | + | Chr2:74884515-74884534 | MsG0280010770.01.T01:intron | 40.0% | |
TCCCCTTACAAAACACTTCA+AGG | - | Chr2:74884417-74884436 | None:intergenic | 40.0% | |
TCGAGATACTTTAACCCAGT+GGG | + | Chr2:74884792-74884811 | MsG0280010770.01.T01:CDS | 40.0% | |
TCTCACCTTATTCTCAGGTT+CGG | + | Chr2:74885261-74885280 | MsG0280010770.01.T01:intron | 40.0% | |
TCTGTGAATGGCAATTTCTG+AGG | - | Chr2:74883022-74883041 | None:intergenic | 40.0% | |
TGTGTCAAAAAGGTAACCCA+AGG | - | Chr2:74884388-74884407 | None:intergenic | 40.0% | |
TTTGCTGGACTAAAAGCAGT+AGG | + | Chr2:74883956-74883975 | MsG0280010770.01.T01:CDS | 40.0% | |
! | ACATTCTAGGCATTGTTTGG+TGG | + | Chr2:74886018-74886037 | MsG0280010770.01.T01:intron | 40.0% |
! | AGAGCTTTTGAACAAGCATC+TGG | + | Chr2:74885506-74885525 | MsG0280010770.01.T01:CDS | 40.0% |
! | GAAGCATCTGTGATTTCCTT+TGG | - | Chr2:74883587-74883606 | None:intergenic | 40.0% |
! | GATGCAGTCATACATTTTGC+TGG | + | Chr2:74883941-74883960 | MsG0280010770.01.T01:CDS | 40.0% |
! | TCTAGTCAATGCTTTTGCTG+CGG | + | Chr2:74884324-74884343 | MsG0280010770.01.T01:intron | 40.0% |
! | TTCTCTTTCAGCCTTTTCTG+TGG | - | Chr2:74885855-74885874 | None:intergenic | 40.0% |
!! | TTGAAGTGTTTTGTAAGGGG+AGG | + | Chr2:74884416-74884435 | MsG0280010770.01.T01:intron | 40.0% |
!!! | AGGAACATCAGTTTTGGAGT+TGG | + | Chr2:74885481-74885500 | MsG0280010770.01.T01:CDS | 40.0% |
AAAACTGTGCTCGTTACTGG+TGG | + | Chr2:74882913-74882932 | MsG0280010770.01.T01:CDS | 45.0% | |
AAAGGAAGCTCTTCGGTACA+TGG | - | Chr2:74884570-74884589 | None:intergenic | 45.0% | |
AAAGGCCAATACAAACGGGA+TGG | - | Chr2:74885120-74885139 | None:intergenic | 45.0% | |
AACTGTGGTTAAGGTCACTC+AGG | - | Chr2:74885067-74885086 | None:intergenic | 45.0% | |
ACCGTTCTTCAGCTCTTACT+CGG | + | Chr2:74882958-74882977 | MsG0280010770.01.T01:CDS | 45.0% | |
ATTCATTCAGCAAGTAGCGG+TGG | + | Chr2:74884875-74884894 | MsG0280010770.01.T01:CDS | 45.0% | |
CATACCTTCGTTCGTCCATA+TGG | - | Chr2:74884606-74884625 | None:intergenic | 45.0% | |
CCTCCCCAATATAACCACTA+GGG | - | Chr2:74884824-74884843 | None:intergenic | 45.0% | |
CTCACCTTATTCTCAGGTTC+GGG | + | Chr2:74885262-74885281 | MsG0280010770.01.T01:intron | 45.0% | |
CTTTGGCCAACCATATACAG+TGG | - | Chr2:74884541-74884560 | None:intergenic | 45.0% | |
GAGTGACCTTAACCACAGTT+TGG | + | Chr2:74885067-74885086 | MsG0280010770.01.T01:intron | 45.0% | |
GCACACCCTAGTGGTTATAT+TGG | + | Chr2:74884816-74884835 | MsG0280010770.01.T01:CDS | 45.0% | |
GCCATTCATTCAGCAAGTAG+CGG | + | Chr2:74884872-74884891 | MsG0280010770.01.T01:CDS | 45.0% | |
GTACTGGGGTATGTTATCAC+TGG | + | Chr2:74884949-74884968 | MsG0280010770.01.T01:intron | 45.0% | |
GTGCCGTGATCAATGGAATT+GGG | + | Chr2:74886128-74886147 | MsG0280010770.01.T01:CDS | 45.0% | |
TAACCCATATGGACGAACGA+AGG | + | Chr2:74884599-74884618 | MsG0280010770.01.T01:CDS | 45.0% | |
TCATCTTCGGCCACTGTATA+TGG | + | Chr2:74884528-74884547 | MsG0280010770.01.T01:CDS | 45.0% | |
TCCTCCCCAATATAACCACT+AGG | - | Chr2:74884825-74884844 | None:intergenic | 45.0% | |
TGATGTGGCAGGGCAAAATA+TGG | + | Chr2:74886093-74886112 | MsG0280010770.01.T01:intron | 45.0% | |
TGCTGACAAAGGAAGCTCTT+CGG | - | Chr2:74884577-74884596 | None:intergenic | 45.0% | |
TGGTGAAGTACAAAGCCCTT+GGG | + | Chr2:74884369-74884388 | MsG0280010770.01.T01:intron | 45.0% | |
TGTGCCGTGATCAATGGAAT+TGG | + | Chr2:74886127-74886146 | MsG0280010770.01.T01:CDS | 45.0% | |
TTCATTCAGCAAGTAGCGGT+GGG | + | Chr2:74884876-74884895 | MsG0280010770.01.T01:CDS | 45.0% | |
TTGCCTGCAGAGAAAAGTTG+AGG | + | Chr2:74884994-74885013 | MsG0280010770.01.T01:intron | 45.0% | |
TTGTCAGCAGCTAACCCATA+TGG | + | Chr2:74884588-74884607 | MsG0280010770.01.T01:CDS | 45.0% | |
! | ACCGCTACTTGCTGAATGAA+TGG | - | Chr2:74884876-74884895 | None:intergenic | 45.0% |
! | AGAGTACCTTGTGAAAGCTG+AGG | - | Chr2:74883077-74883096 | None:intergenic | 45.0% |
! | AGATTGTTTGGAACTCCACG+AGG | - | Chr2:74884849-74884868 | None:intergenic | 45.0% |
! | CACTGTATATGGTTGGCCAA+AGG | + | Chr2:74884539-74884558 | MsG0280010770.01.T01:CDS | 45.0% |
! | CTTCCTCAACTTTTCTCTGC+AGG | - | Chr2:74885000-74885019 | None:intergenic | 45.0% |
! | GGACGAACGAAGGTATGATT+AGG | + | Chr2:74884609-74884628 | MsG0280010770.01.T01:intron | 45.0% |
! | TGTATATGGTTGGCCAAAGG+AGG | + | Chr2:74884542-74884561 | MsG0280010770.01.T01:CDS | 45.0% |
!! | TATGGGTTAGCTGCTGACAA+AGG | - | Chr2:74884588-74884607 | None:intergenic | 45.0% |
!! | TGGGCTAGCAAAAACCCTTA+TGG | + | Chr2:74886147-74886166 | MsG0280010770.01.T01:CDS | 45.0% |
AAGGAACTCGCCGGTGAATT+TGG | + | Chr2:74883045-74883064 | MsG0280010770.01.T01:CDS | 50.0% | |
AGGAACTCGCCGGTGAATTT+GGG | + | Chr2:74883046-74883065 | MsG0280010770.01.T01:CDS | 50.0% | |
CACAGAGTTAAGGAACTCGC+CGG | + | Chr2:74883036-74883055 | MsG0280010770.01.T01:CDS | 50.0% | |
CCCTAGTGGTTATATTGGGG+AGG | + | Chr2:74884821-74884840 | MsG0280010770.01.T01:CDS | 50.0% | |
CCCTTATGGCTATGGATCTC+CGG | + | Chr2:74886161-74886180 | MsG0280010770.01.T01:CDS | 50.0% | |
CCGGAGATCCATAGCCATAA+GGG | - | Chr2:74886164-74886183 | None:intergenic | 50.0% | |
CTATGGATCTCCGGATTCCA+CGG | + | Chr2:74886170-74886189 | MsG0280010770.01.T01:CDS | 50.0% | |
CTTCGGCCACTGTATATGGT+TGG | + | Chr2:74884532-74884551 | MsG0280010770.01.T01:CDS | 50.0% | |
CTTGGATAATTCCGAGGCAG+TGG | + | Chr2:74885362-74885381 | MsG0280010770.01.T01:intron | 50.0% | |
GCCAATACAAACGGGATGGA+GGG | - | Chr2:74885116-74885135 | None:intergenic | 50.0% | |
GCCGAGTAAGAGCTGAAGAA+CGG | - | Chr2:74882962-74882981 | None:intergenic | 50.0% | |
GGTGTGGCTACCAATGTAAC+CGG | - | Chr2:74882941-74882960 | None:intergenic | 50.0% | |
GTAAGAGCTGAAGAACGGTG+TGG | - | Chr2:74882957-74882976 | None:intergenic | 50.0% | |
GTGGTGAAGTACAAAGCCCT+TGG | + | Chr2:74884368-74884387 | MsG0280010770.01.T01:intron | 50.0% | |
GTTCTTCAGCTCTTACTCGG+CGG | + | Chr2:74882961-74882980 | MsG0280010770.01.T01:CDS | 50.0% | |
TATATTGGGGAGGATCCTCG+TGG | + | Chr2:74884831-74884850 | MsG0280010770.01.T01:CDS | 50.0% | |
TCCCTCCATCCCGTTTGTAT+TGG | + | Chr2:74885112-74885131 | MsG0280010770.01.T01:intron | 50.0% | |
TCCGGAGATCCATAGCCATA+AGG | - | Chr2:74886165-74886184 | None:intergenic | 50.0% | |
TCGGTACATGGAACCTCCTT+TGG | - | Chr2:74884558-74884577 | None:intergenic | 50.0% | |
TCTGCAGGCAAGATTTCAGC+AGG | - | Chr2:74884985-74885004 | None:intergenic | 50.0% | |
TTGGAAGTCATGGCTGCTCA+TGG | + | Chr2:74884040-74884059 | MsG0280010770.01.T01:CDS | 50.0% | |
TTTCAGCATCGCCAGGTCTA+CGG | - | Chr2:74885820-74885839 | None:intergenic | 50.0% | |
!! | CGGCCTGCACTGACAATTTT+TGG | + | Chr2:74884903-74884922 | MsG0280010770.01.T01:CDS | 50.0% |
GGCCAATACAAACGGGATGG+AGG | - | Chr2:74885117-74885136 | None:intergenic | 55.0% | |
GGCTGCTCATGGATGCAAGA+AGG | + | Chr2:74884051-74884070 | MsG0280010770.01.T01:CDS | 55.0% | |
!! | ACTGGTGGTGCCGGTTACAT+TGG | + | Chr2:74882928-74882947 | MsG0280010770.01.T01:CDS | 55.0% |
AGCAAGTAGCGGTGGGCAGA+CGG | + | Chr2:74884883-74884902 | MsG0280010770.01.T01:CDS | 60.0% | |
CACTAGGGTGTGCACCCACT+GGG | - | Chr2:74884809-74884828 | None:intergenic | 60.0% | |
CATGGTGTGTGTGCGTGCAC+AGG | + | Chr2:74885428-74885447 | MsG0280010770.01.T01:intron | 60.0% | |
CGTCACTGCAGGCAGATCTC+CGG | + | Chr2:74883688-74883707 | MsG0280010770.01.T01:intron | 60.0% | |
CTACGGCCAGCCTTCACAAG+TGG | - | Chr2:74885803-74885822 | None:intergenic | 60.0% | |
GTCACTGCAGGCAGATCTCC+GGG | + | Chr2:74883689-74883708 | MsG0280010770.01.T01:intron | 60.0% | |
GTGTGCGTGCACAGGTTGTG+AGG | + | Chr2:74885436-74885455 | MsG0280010770.01.T01:intron | 60.0% | |
TTCATCGTGCCGAGCCAGAC+TGG | + | Chr2:74884757-74884776 | MsG0280010770.01.T01:CDS | 60.0% | |
! | GTGCTCGTTACTGGTGGTGC+CGG | + | Chr2:74882919-74882938 | MsG0280010770.01.T01:CDS | 60.0% |
CCACTAGGGTGTGCACCCAC+TGG | - | Chr2:74884810-74884829 | None:intergenic | 65.0% | |
CCAGTGGGTGCACACCCTAG+TGG | + | Chr2:74884807-74884826 | MsG0280010770.01.T01:CDS | 65.0% | |
GCAGGCAGATCTCCGGGACA+GGG | + | Chr2:74883695-74883714 | MsG0280010770.01.T01:intron | 65.0% | |
TGCAGGCAGATCTCCGGGAC+AGG | + | Chr2:74883694-74883713 | MsG0280010770.01.T01:intron | 65.0% | |
! | GTGAAGGCTGGCCGTAGACC+TGG | + | Chr2:74885806-74885825 | MsG0280010770.01.T01:CDS | 65.0% |
!! | GCTCTAGAGCAGCCCTGTCC+CGG | - | Chr2:74883710-74883729 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 74882880 | 74886197 | 74882880 | ID=MsG0280010770.01;Name=MsG0280010770.01 |
Chr2 | mRNA | 74882880 | 74886197 | 74882880 | ID=MsG0280010770.01.T01;Parent=MsG0280010770.01;Name=MsG0280010770.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|9|0|357 |
Chr2 | exon | 74882880 | 74883089 | 74882880 | ID=MsG0280010770.01.T01:exon:7392;Parent=MsG0280010770.01.T01 |
Chr2 | exon | 74883699 | 74883748 | 74883699 | ID=MsG0280010770.01.T01:exon:7393;Parent=MsG0280010770.01.T01 |
Chr2 | exon | 74883937 | 74884072 | 74883937 | ID=MsG0280010770.01.T01:exon:7394;Parent=MsG0280010770.01.T01 |
Chr2 | exon | 74884519 | 74884620 | 74884519 | ID=MsG0280010770.01.T01:exon:7395;Parent=MsG0280010770.01.T01 |
Chr2 | exon | 74884729 | 74884956 | 74884729 | ID=MsG0280010770.01.T01:exon:7396;Parent=MsG0280010770.01.T01 |
Chr2 | exon | 74885278 | 74885356 | 74885278 | ID=MsG0280010770.01.T01:exon:7397;Parent=MsG0280010770.01.T01 |
Chr2 | exon | 74885450 | 74885532 | 74885450 | ID=MsG0280010770.01.T01:exon:7398;Parent=MsG0280010770.01.T01 |
Chr2 | exon | 74885794 | 74885885 | 74885794 | ID=MsG0280010770.01.T01:exon:7399;Parent=MsG0280010770.01.T01 |
Chr2 | exon | 74886104 | 74886197 | 74886104 | ID=MsG0280010770.01.T01:exon:7400;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74882880 | 74883089 | 74882880 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74883699 | 74883748 | 74883699 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74883937 | 74884072 | 74883937 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74884519 | 74884620 | 74884519 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74884729 | 74884956 | 74884729 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74885278 | 74885356 | 74885278 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74885450 | 74885532 | 74885450 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74885794 | 74885885 | 74885794 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Chr2 | CDS | 74886104 | 74886197 | 74886104 | ID=MsG0280010770.01.T01:cds;Parent=MsG0280010770.01.T01 |
Gene Sequence |
Protein sequence |