AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011202.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011202.01.T01 MTR_2g099940 92.571 350 25 1 78 426 18 367 0.0 551
MsG0280011202.01.T01 MTR_2g039680 72.165 291 78 2 74 363 16 304 5.29e-136 394
MsG0280011202.01.T01 MTR_2g039680 72.165 291 78 2 74 363 16 304 2.35e-135 393
MsG0280011202.01.T01 MTR_2g039697 59.857 279 105 3 80 356 23 296 4.80e-116 342
MsG0280011202.01.T01 MTR_2g039700 56.944 288 105 4 80 363 28 300 9.73e-97 294
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011202.01.T01 AT2G19480 66.017 359 116 3 73 426 15 372 2.18e-137 398
MsG0280011202.01.T01 AT2G19480 72.028 286 77 2 73 356 15 299 6.84e-136 395
MsG0280011202.01.T01 AT2G19480 72.028 286 77 2 73 356 15 299 8.39e-136 395
MsG0280011202.01.T01 AT5G56950 64.444 360 120 4 74 426 16 374 1.31e-134 391
MsG0280011202.01.T01 AT4G26110 69.204 289 85 2 73 358 15 302 7.18e-134 389
MsG0280011202.01.T01 AT4G26110 68.729 291 87 2 71 358 13 302 1.23e-133 389
MsG0280011202.01.T01 AT3G13782 57.854 261 87 4 105 356 52 298 2.88e-93 284
MsG0280011202.01.T01 AT3G13782 57.854 261 87 4 105 356 52 298 2.88e-93 284
MsG0280011202.01.T01 AT1G74560 29.911 224 117 6 113 330 31 220 7.50e-20 89.4
MsG0280011202.01.T01 AT1G74560 29.151 271 137 8 113 381 31 248 7.50e-14 71.6
MsG0280011202.01.T01 AT1G18800 28.772 285 148 9 102 384 16 247 1.17e-13 71.2

Find 101 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAGCATGATTATGATAT+TGG 0.178236 2:+80901473 MsG0280011202.01.T01:CDS
CCTATTGATTTCTCTAATAT+AGG 0.244249 2:-80901084 None:intergenic
CGTCATCATCCTCGGGAATC+TGG 0.256403 2:-80901328 None:intergenic
TGAAGAGCTTCAAAATTTAA+TGG 0.286494 2:+80901454 MsG0280011202.01.T01:CDS
AATGAAGACTAATGAAATAT+TGG 0.305931 2:+80900808 MsG0280011202.01.T01:CDS
AGAAAGGAGTCCCTAGCTTT+TGG 0.317796 2:+80900777 MsG0280011202.01.T01:CDS
TGACTGATCTTTACCAGGTT+TGG 0.330775 2:-80902474 None:intergenic
CTATTGATTTCTCTAATATA+GGG 0.335034 2:-80901083 None:intergenic
CCTATATTAGAGAAATCAAT+AGG 0.345836 2:+80901084 MsG0280011202.01.T01:CDS
CCTAGAGCATTCGTTAAAAC+CGG 0.357073 2:+80897361 MsG0280011202.01.T01:CDS
GTAGGATAAGCTTCAGCTCT+TGG 0.371162 2:+80899562 MsG0280011202.01.T01:intron
AAAGTGGTTCATAAAGCTTC+TGG 0.375481 2:-80900210 None:intergenic
ATCAATTTCGTCATCATCCT+CGG 0.387289 2:-80901336 None:intergenic
GATAAGCTTCAGCTCTTGGC+TGG 0.400903 2:+80899566 MsG0280011202.01.T01:CDS
TGGAGCATGATTATGATATT+GGG 0.401577 2:+80901474 MsG0280011202.01.T01:CDS
GTCATCATCCTCGGGAATCT+GGG 0.405862 2:-80901327 None:intergenic
TCATGCTGTGTCATGGTTCA+CGG 0.413395 2:+80902128 MsG0280011202.01.T01:CDS
AGGAGGAAGACGAAGGGAAG+GGG 0.415086 2:+80902268 MsG0280011202.01.T01:CDS
GATCTTCCCGCTGCCGCCGC+CGG 0.433634 2:+80899144 MsG0280011202.01.T01:CDS
GCAGAGCGAACATGATGAAT+TGG 0.440473 2:+80900144 MsG0280011202.01.T01:intron
TCAACACGTTGCCTGACATT+AGG 0.442995 2:-80899620 None:intergenic
TACTGCTGCTTGCAATCAGC+AGG 0.443739 2:-80902506 None:intergenic
AACTCCAGCTTGAAACCCTT+GGG 0.448772 2:-80900988 None:intergenic
CCTAAGTTCCACATTCGTAT+AGG 0.453881 2:-80897309 None:intergenic
GAGGAGGAAGACGAAGGGAA+GGG 0.455702 2:+80902267 MsG0280011202.01.T01:CDS
ATGAAGACTAATGAAATATT+GGG 0.458634 2:+80900809 MsG0280011202.01.T01:CDS
ATGTTACCGGCGGCGGCAGC+GGG 0.460017 2:-80899150 None:intergenic
TTTGTGTCAAGCACTTTCCT+GGG 0.461063 2:-80901208 None:intergenic
TGAGGAGGAAGACGAAGGGA+AGG 0.464687 2:+80902266 MsG0280011202.01.T01:CDS
AATTACAAACGAAGCAGGAC+AGG 0.467567 2:+80900642 MsG0280011202.01.T01:CDS
ATCTATACTCTATGTTGAGT+GGG 0.469096 2:+80897252 None:intergenic
ATTGCAGTTAACCAAAAGCT+AGG 0.474607 2:-80900788 None:intergenic
GATGTTACCGGCGGCGGCAG+CGG 0.475914 2:-80899151 None:intergenic
AAACTCCAGCTTGAAACCCT+TGG 0.483887 2:-80900989 None:intergenic
ACACACACCTTTGTGTAAAG+TGG 0.485158 2:-80900226 None:intergenic
TCGTATAGGTGAGTCTATCA+AGG 0.488058 2:-80897295 None:intergenic
TTTAGAGGAGCGAGCTCAGT+TGG 0.495888 2:+80900177 MsG0280011202.01.T01:CDS
GGCGGCGGCAGCGGGAAGAT+CGG 0.499586 2:-80899142 None:intergenic
AAGGCCCTGCACGTGTATCC+CGG 0.507039 2:-80897380 None:intergenic
CATGCTGTGTCATGGTTCAC+GGG 0.510537 2:+80902129 MsG0280011202.01.T01:CDS
AGACAGAGATGAAGATGAAG+AGG 0.511035 2:+80902203 MsG0280011202.01.T01:CDS
CAATCCCAAGGGTTTCAAGC+TGG 0.511184 2:+80900984 MsG0280011202.01.T01:CDS
ATAAGCTTCAGCTCTTGGCT+GGG 0.519230 2:+80899567 MsG0280011202.01.T01:CDS
GCCTCGAAATTCCATAGGAC+TGG 0.519433 2:-80897332 None:intergenic
AAACACTTTCGCCTAATGTC+AGG 0.521826 2:+80899609 MsG0280011202.01.T01:CDS
AGGAAAGTGCTTGACACAAA+AGG 0.521935 2:+80901211 MsG0280011202.01.T01:CDS
TGAGGATGAAGATGATGAGG+AGG 0.524386 2:+80902251 MsG0280011202.01.T01:CDS
ATGATGAGGAGGAAGACGAA+GGG 0.532918 2:+80902262 MsG0280011202.01.T01:CDS
GATGATGAGGAGGAAGACGA+AGG 0.535181 2:+80902261 MsG0280011202.01.T01:CDS
GGGAAGATCGGCGGATTGAT+CGG 0.536009 2:-80899130 None:intergenic
TCAATTTCGTCATCATCCTC+GGG 0.537035 2:-80901335 None:intergenic
TCATCCTCGGGAATCTGGGG+AGG 0.537400 2:-80901323 None:intergenic
TGGAACTTAGGCCAGTCCTA+TGG 0.537874 2:+80897321 MsG0280011202.01.T01:CDS
GCCAGTCCTATGGAATTTCG+AGG 0.538047 2:+80897331 MsG0280011202.01.T01:CDS
TGATGACGATGAAGAGGATG+AGG 0.541376 2:+80902233 MsG0280011202.01.T01:CDS
CCTATACGAATGTGGAACTT+AGG 0.541498 2:+80897309 MsG0280011202.01.T01:CDS
TAATGTCAGGCAACGTGTTG+AGG 0.542732 2:+80899622 MsG0280011202.01.T01:CDS
TAATGAAATATTGGGTGAAG+AGG 0.544626 2:+80900817 MsG0280011202.01.T01:CDS
GGATGAGGATGAAGATGATG+AGG 0.546840 2:+80902248 MsG0280011202.01.T01:CDS
TCAGTTGACTGATCTTTACC+AGG 0.547286 2:-80902479 None:intergenic
AGTGGTAGCAAGGCCAAACC+TGG 0.552380 2:+80902461 MsG0280011202.01.T01:CDS
TAAGCTTCAGCTCTTGGCTG+GGG 0.556329 2:+80899568 MsG0280011202.01.T01:CDS
TTATTCCTCATGCTGTGTCA+TGG 0.556398 2:+80902121 MsG0280011202.01.T01:CDS
TGTGTCATGGTTCACGGGAG+AGG 0.556613 2:+80902134 MsG0280011202.01.T01:CDS
AGTATCTCAAAGATATCAAG+TGG 0.556691 2:+80900950 MsG0280011202.01.T01:CDS
TGAGTGGGGTACACAGCTAC+AGG 0.558054 2:+80897267 MsG0280011202.01.T01:CDS
GGCGGCAGCGGGAAGATCGG+CGG 0.558135 2:-80899139 None:intergenic
TAGAGGTACGAGATTGTCAA+TGG 0.558349 2:+80900601 MsG0280011202.01.T01:intron
CACAAAAGGTTATGAAGAAG+AGG 0.558627 2:+80901225 MsG0280011202.01.T01:CDS
CTAGAGCATTCGTTAAAACC+GGG 0.559830 2:+80897362 MsG0280011202.01.T01:CDS
CTATATTAGAGAAATCAATA+GGG 0.565007 2:+80901085 MsG0280011202.01.T01:CDS
ATGAAGAAGAGGCCAAAGAA+AGG 0.565048 2:+80901236 MsG0280011202.01.T01:CDS
AATGGTGTTATTGACGTTGA+AGG 0.565526 2:+80900619 MsG0280011202.01.T01:CDS
GAAATTGATGTTACCGGCGG+CGG 0.568217 2:-80899157 None:intergenic
GATCTATACTCTATGTTGAG+TGG 0.572441 2:+80897251 None:intergenic
TGGGGATCGTGTGGATGTCA+TGG 0.574954 2:+80899586 MsG0280011202.01.T01:CDS
CATCCTCGGGAATCTGGGGA+GGG 0.576916 2:-80901322 None:intergenic
CTCAGTGCTGAAGATCGTGC+TGG 0.579116 2:+80899330 MsG0280011202.01.T01:CDS
ACTGCTGCTTGCAATCAGCA+GGG 0.579841 2:-80902505 None:intergenic
ACGGAAATTGAGTGGCACCC+AGG 0.582717 2:+80901191 MsG0280011202.01.T01:CDS
GCTCTTGGCTGGGGATCGTG+TGG 0.587567 2:+80899577 MsG0280011202.01.T01:CDS
GAAGGAATTACAAACGAAGC+AGG 0.588859 2:+80900637 MsG0280011202.01.T01:CDS
TGATGATGATGACGATGAAG+AGG 0.595217 2:+80902227 MsG0280011202.01.T01:CDS
TTGCAGTTAACCAAAAGCTA+GGG 0.595713 2:-80900787 None:intergenic
TTAACTGCAGAGTGGTAGCA+AGG 0.597517 2:+80902451 MsG0280011202.01.T01:intron
CGTATAGGTGAGTCTATCAA+GGG 0.605607 2:-80897294 None:intergenic
ATTCTGCCTCGAAATTCCAT+AGG 0.621542 2:-80897337 None:intergenic
TCATCATCCTCGGGAATCTG+GGG 0.622634 2:-80901326 None:intergenic
GAAGGGGAAGAACAAGAGCA+AGG 0.624049 2:+80902284 MsG0280011202.01.T01:CDS
GAAGAAAGCAAAGCTGCTGA+AGG 0.627950 2:+80900667 MsG0280011202.01.T01:CDS
CAACCCTCCCCAGATTCCCG+AGG 0.628448 2:+80901319 MsG0280011202.01.T01:CDS
GAGTAAACTTGACAATCCCA+AGG 0.632238 2:+80900972 MsG0280011202.01.T01:CDS
GATCACTGAACGTGATGAGG+AGG 0.639093 2:+80900921 MsG0280011202.01.T01:intron
TTATGAACCACTTTACACAA+AGG 0.641292 2:+80900219 MsG0280011202.01.T01:CDS
ATTGTAGAACGGAAATTGAG+TGG 0.652316 2:+80901183 MsG0280011202.01.T01:intron
ATTACAAACGAAGCAGGACA+GGG 0.657529 2:+80900643 MsG0280011202.01.T01:CDS
TAGACTCACCTATACGAATG+TGG 0.669628 2:+80897301 MsG0280011202.01.T01:CDS
TCTATACTCTATGTTGAGTG+GGG 0.677188 2:+80897253 None:intergenic
ATAGATCACTGAACGTGATG+AGG 0.688272 2:+80900918 MsG0280011202.01.T01:intron
AGTAAACTTGACAATCCCAA+GGG 0.689310 2:+80900973 MsG0280011202.01.T01:CDS
GTGAACCATGACACAGCATG+AGG 0.722020 2:-80902126 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTTAATAATTTTA+AGG + Chr2:80898325-80898344 MsG0280011202.01.T01:intron 0.0%
!! AAAAAAAAAAAAATTGGAAA+AGG + Chr2:80901928-80901947 MsG0280011202.01.T01:intron 10.0%
!! AAAAGGAAAAAAAAAAAAAT+TGG + Chr2:80901922-80901941 MsG0280011202.01.T01:intron 10.0%
!! AAGAATTAATATTAACTAAA+GGG + Chr2:80901897-80901916 MsG0280011202.01.T01:intron 10.0%
!!! TTATTTTCTCAAATTATTAT+GGG + Chr2:80899946-80899965 MsG0280011202.01.T01:intron 10.0%
!!! TTTATTTTCTCAAATTATTA+TGG + Chr2:80899945-80899964 MsG0280011202.01.T01:intron 10.0%
!! ATTAACTTAAGGAAAAAAAA+TGG + Chr2:80901966-80901985 MsG0280011202.01.T01:intron 15.0%
!! GAAGAATTAATATTAACTAA+AGG + Chr2:80901896-80901915 MsG0280011202.01.T01:intron 15.0%
!! GAAGAATTAATATTAACTTA+AGG + Chr2:80901955-80901974 MsG0280011202.01.T01:intron 15.0%
!! TATATGAAATAATTAACAGA+TGG - Chr2:80900876-80900895 None:intergenic 15.0%
!!! CAATATCTTTTAATTTCTTA+GGG + Chr2:80901112-80901131 MsG0280011202.01.T01:intron 15.0%
!!! GCTATTTTTATAAGTTATAT+TGG - Chr2:80900371-80900390 None:intergenic 15.0%
!!! TAATACCATATTAATTTGAA+CGG + Chr2:80898464-80898483 MsG0280011202.01.T01:intron 15.0%
!!! TTAATAATTTTAAGGAGAAA+TGG + Chr2:80898333-80898352 MsG0280011202.01.T01:intron 15.0%
!! AACTAGTAAGTGTTTATATA+TGG + Chr2:80897726-80897745 MsG0280011202.01.T01:intron 20.0%
!! AAGAATCATATATTATCGAA+GGG - Chr2:80898252-80898271 None:intergenic 20.0%
!! AATGAAGACTAATGAAATAT+TGG + Chr2:80900808-80900827 MsG0280011202.01.T01:CDS 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG + Chr2:80897727-80897746 MsG0280011202.01.T01:intron 20.0%
!! ATATATAAACACTTACTAGT+TGG - Chr2:80897727-80897746 None:intergenic 20.0%
!! ATATTAACTAAAGGGAAAAA+AGG + Chr2:80901905-80901924 MsG0280011202.01.T01:intron 20.0%
!! ATGAAGACTAATGAAATATT+GGG + Chr2:80900809-80900828 MsG0280011202.01.T01:CDS 20.0%
!! ATTAACTTAAGGAAAAAAGT+TGG + Chr2:80901863-80901882 MsG0280011202.01.T01:intron 20.0%
!! CTATATTAGAGAAATCAATA+GGG + Chr2:80901085-80901104 MsG0280011202.01.T01:CDS 20.0%
!! GAACTGATATTAACTTAAAA+CGG + Chr2:80901825-80901844 MsG0280011202.01.T01:intron 20.0%
!! GAAGAAGTAATATTAACTTA+AGG + Chr2:80901852-80901871 MsG0280011202.01.T01:intron 20.0%
!! GTATTATTACCATTCTATTA+TGG - Chr2:80898450-80898469 None:intergenic 20.0%
!! TATATAAACACTTACTAGTT+GGG - Chr2:80897726-80897745 None:intergenic 20.0%
!! TCAAAAAACAAAATAGTACT+AGG - Chr2:80902058-80902077 None:intergenic 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + Chr2:80897632-80897651 MsG0280011202.01.T01:intron 20.0%
!! TTCGATAATATATGATTCTT+CGG + Chr2:80898252-80898271 MsG0280011202.01.T01:intron 20.0%
!! TTGTATATTAGCAAATCTTA+TGG + Chr2:80897546-80897565 MsG0280011202.01.T01:intron 20.0%
!!! CAAAAACAACAATTTTTCAA+CGG + Chr2:80898774-80898793 MsG0280011202.01.T01:intron 20.0%
!!! CATTTTTCTGTTTTTATGAT+TGG - Chr2:80901278-80901297 None:intergenic 20.0%
!!! CTATTGATTTCTCTAATATA+GGG - Chr2:80901086-80901105 None:intergenic 20.0%
!!! GAATTTACTCTGTTTTTATT+AGG + Chr2:80901606-80901625 MsG0280011202.01.T01:intron 20.0%
!!! GCAATATCTTTTAATTTCTT+AGG + Chr2:80901111-80901130 MsG0280011202.01.T01:intron 20.0%
!!! GTGATTAAATTATTTTGTCA+CGG + Chr2:80899737-80899756 MsG0280011202.01.T01:intron 20.0%
!!! GTTTAATTTCTTTTTTGTTG+TGG + Chr2:80900032-80900051 MsG0280011202.01.T01:intron 20.0%
!!! TAAGATTTGCTAATATACAA+AGG - Chr2:80897546-80897565 None:intergenic 20.0%
!!! TAGTACTATTTTGTTTTTTG+AGG + Chr2:80902057-80902076 MsG0280011202.01.T01:intron 20.0%
!!! TATCTAAGTAATCAGAATTT+TGG + Chr2:80899402-80899421 MsG0280011202.01.T01:intron 20.0%
!!! TATTATCTGTTGTTTGTTTA+TGG + Chr2:80900575-80900594 MsG0280011202.01.T01:intron 20.0%
!!! TTTCATTTTTACATTAGCAA+GGG + Chr2:80900088-80900107 MsG0280011202.01.T01:intron 20.0%
!!! TTTTCTTAATTGGAAATATC+CGG - Chr2:80897948-80897967 None:intergenic 20.0%
! AAATGTGACAACATGAAAAA+GGG + Chr2:80898952-80898971 MsG0280011202.01.T01:intron 25.0%
! AACGATTGTTAAAATCGAAA+GGG - Chr2:80898149-80898168 None:intergenic 25.0%
! AACTTAAGGAAAAAAAATGG+TGG + Chr2:80901969-80901988 MsG0280011202.01.T01:intron 25.0%
! ACTTAAGGAAAAAAAATGGT+GGG + Chr2:80901970-80901989 MsG0280011202.01.T01:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG - Chr2:80897725-80897744 None:intergenic 25.0%
! ATGAAAGAAATGAAGAAAAC+TGG - Chr2:80899105-80899124 None:intergenic 25.0%
! CCAATAGATAAGCTAAAATA+AGG - Chr2:80900260-80900279 None:intergenic 25.0%
! CCTATATTAGAGAAATCAAT+AGG + Chr2:80901084-80901103 MsG0280011202.01.T01:CDS 25.0%
! GAAGAATCATATATTATCGA+AGG - Chr2:80898253-80898272 None:intergenic 25.0%
! GAGATTCAAATTTAACAGTT+TGG + Chr2:80898746-80898765 MsG0280011202.01.T01:intron 25.0%
! TATCCAATTGATTAAAACCT+AGG + Chr2:80899274-80899293 MsG0280011202.01.T01:intron 25.0%
! TGAAGAGCTTCAAAATTTAA+TGG + Chr2:80901454-80901473 MsG0280011202.01.T01:CDS 25.0%
! TTAAGGAAAAAAGTTGGAAA+AGG + Chr2:80901869-80901888 MsG0280011202.01.T01:intron 25.0%
! TTGTTTGTTTATGGTTATAG+AGG + Chr2:80900584-80900603 MsG0280011202.01.T01:intron 25.0%
!! AAACTATAGTGTTGTTATGA+TGG + Chr2:80899460-80899479 MsG0280011202.01.T01:intron 25.0%
!! ATTAGAGAATGAACTTTTAC+AGG - Chr2:80899048-80899067 None:intergenic 25.0%
!! GGATAATGATTTTGAATTAG+AGG - Chr2:80899259-80899278 None:intergenic 25.0%
!! TTTAGAATACACCTATGAAA+AGG + Chr2:80897417-80897436 MsG0280011202.01.T01:intron 25.0%
!! TTTCAACTAATACTTTTGAG+TGG - Chr2:80901687-80901706 None:intergenic 25.0%
!!! ACTCAAAAGTATTAGTTGAA+AGG + Chr2:80901686-80901705 MsG0280011202.01.T01:intron 25.0%
!!! AGTAGTTGATAAAGTTACTA+GGG - Chr2:80899230-80899249 None:intergenic 25.0%
!!! ATAATTTTAAGGAGAAATGG+TGG + Chr2:80898336-80898355 MsG0280011202.01.T01:intron 25.0%
!!! CCTATTGATTTCTCTAATAT+AGG - Chr2:80901087-80901106 None:intergenic 25.0%
!!! CCTTATTTTAGCTTATCTAT+TGG + Chr2:80900257-80900276 MsG0280011202.01.T01:intron 25.0%
!!! CGTTGAAAAATTGTTGTTTT+TGG - Chr2:80898776-80898795 None:intergenic 25.0%
!!! GTTTACATAAGCTATTTTCA+TGG - Chr2:80900437-80900456 None:intergenic 25.0%
!!! GTTTCATTTTTACATTAGCA+AGG + Chr2:80900087-80900106 MsG0280011202.01.T01:intron 25.0%
!!! TAGTAGTTGATAAAGTTACT+AGG - Chr2:80899231-80899250 None:intergenic 25.0%
!!! TTCTGTTTTTATGATTGGTT+TGG - Chr2:80901273-80901292 None:intergenic 25.0%
AAGATTCAGGATAGTATCAA+AGG - Chr2:80900744-80900763 None:intergenic 30.0%
ACCAACACTTTATCAATAGT+AGG + Chr2:80899013-80899032 MsG0280011202.01.T01:intron 30.0%
ACTATGAAAAAACTAGTGTG+TGG + Chr2:80897665-80897684 MsG0280011202.01.T01:intron 30.0%
ACTTCTCCAAAACATGAATA+TGG - Chr2:80898389-80898408 None:intergenic 30.0%
AGAATTACACCCTCAAAATA+TGG - Chr2:80898544-80898563 None:intergenic 30.0%
AGTATCTCAAAGATATCAAG+TGG + Chr2:80900950-80900969 MsG0280011202.01.T01:CDS 30.0%
ATCAGAAAATTAGACACTAC+GGG - Chr2:80900519-80900538 None:intergenic 30.0%
ATGGAGCATGATTATGATAT+TGG + Chr2:80901473-80901492 MsG0280011202.01.T01:CDS 30.0%
CAACAGTATAATTTAGACCT+AGG - Chr2:80899294-80899313 None:intergenic 30.0%
CATCAGAAAATTAGACACTA+CGG - Chr2:80900520-80900539 None:intergenic 30.0%
CCAACACTTTATCAATAGTA+GGG + Chr2:80899014-80899033 MsG0280011202.01.T01:intron 30.0%
CGAAACCGTTCAAATTAATA+TGG - Chr2:80898472-80898491 None:intergenic 30.0%
CTATGAAAAAACTAGTGTGT+GGG + Chr2:80897666-80897685 MsG0280011202.01.T01:intron 30.0%
CTGAATTATACGAAAGATTC+AGG - Chr2:80900757-80900776 None:intergenic 30.0%
CTTAAGGAAAAAAAATGGTG+GGG + Chr2:80901971-80901990 MsG0280011202.01.T01:intron 30.0%
CTTTCGTATAATTCAGAGAA+AGG + Chr2:80900761-80900780 MsG0280011202.01.T01:intron 30.0%
GAAAGTGAAATTGATGTTAC+CGG - Chr2:80899166-80899185 None:intergenic 30.0%
GAAATGTGACAACATGAAAA+AGG + Chr2:80898951-80898970 MsG0280011202.01.T01:intron 30.0%
GAACGATTGTTAAAATCGAA+AGG - Chr2:80898150-80898169 None:intergenic 30.0%
GAATATCTTCCACTATGTTA+AGG + Chr2:80897502-80897521 MsG0280011202.01.T01:intron 30.0%
GGATACCAATATCATAATCA+TGG - Chr2:80901558-80901577 None:intergenic 30.0%
GTATCAAAGGAGAATGTATA+TGG - Chr2:80900731-80900750 None:intergenic 30.0%
TAAAAATGTCCCACATTGAA+GGG + Chr2:80897696-80897715 MsG0280011202.01.T01:intron 30.0%
TAATGAAATATTGGGTGAAG+AGG + Chr2:80900817-80900836 MsG0280011202.01.T01:CDS 30.0%
TATAAGTTGTTTGTCCAAAC+AGG + Chr2:80900493-80900512 MsG0280011202.01.T01:intron 30.0%
TGAAGCCATGATTATGATAT+TGG + Chr2:80901550-80901569 MsG0280011202.01.T01:intron 30.0%
TGGAGCATGATTATGATATT+GGG + Chr2:80901474-80901493 MsG0280011202.01.T01:CDS 30.0%
TGTCACGGATACAAATATTT+GGG + Chr2:80899752-80899771 MsG0280011202.01.T01:intron 30.0%
TTAAAAATGTCCCACATTGA+AGG + Chr2:80897695-80897714 MsG0280011202.01.T01:intron 30.0%
TTAACTCTCTGCTAAACTAT+GGG + Chr2:80902392-80902411 MsG0280011202.01.T01:intron 30.0%
TTAAGGAAAAAAAATGGTGG+GGG + Chr2:80901972-80901991 MsG0280011202.01.T01:intron 30.0%
TTAATCAAACAGTTGTAGCT+GGG + Chr2:80898590-80898609 MsG0280011202.01.T01:intron 30.0%
TTATGAACCACTTTACACAA+AGG + Chr2:80900219-80900238 MsG0280011202.01.T01:CDS 30.0%
TTCACAAACAATTCCACAAA+GGG - Chr2:80899527-80899546 None:intergenic 30.0%
TTGAACGTAATCACATGTAT+CGG - Chr2:80899921-80899940 None:intergenic 30.0%
TTGTCACGGATACAAATATT+TGG + Chr2:80899751-80899770 MsG0280011202.01.T01:intron 30.0%
TTTCACAAACAATTCCACAA+AGG - Chr2:80899528-80899547 None:intergenic 30.0%
TTTGCTTGAACATTGTAGAA+CGG + Chr2:80901172-80901191 MsG0280011202.01.T01:intron 30.0%
! AGCAAACGTGTTTTCTTAAT+TGG - Chr2:80897958-80897977 None:intergenic 30.0%
! CATGAGGAATAATTTTGTCT+CGG - Chr2:80902113-80902132 None:intergenic 30.0%
! TCTTATTCTTTTGATGTGAG+TGG + Chr2:80901527-80901546 MsG0280011202.01.T01:intron 30.0%
! TTTTATAGGCAGAGTTACTT+GGG - Chr2:80898053-80898072 None:intergenic 30.0%
! TTTTTGTTAGCACGGAATTT+TGG - Chr2:80901038-80901057 None:intergenic 30.0%
!! AGACCTAGGTTTTAATCAAT+TGG - Chr2:80899280-80899299 None:intergenic 30.0%
!! ATTGGAGAGTAAGTTTTTAG+AGG + Chr2:80900162-80900181 MsG0280011202.01.T01:CDS 30.0%
!! GTGATATGTTTTTGTTAGCA+CGG - Chr2:80901046-80901065 None:intergenic 30.0%
!! TATGTTAAGGTTCAAGTTGT+TGG + Chr2:80897515-80897534 MsG0280011202.01.T01:intron 30.0%
!!! AAACCATTTTGAAGTCAAGT+GGG + Chr2:80897591-80897610 MsG0280011202.01.T01:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG + Chr2:80898394-80898413 MsG0280011202.01.T01:intron 30.0%
!!! ATTTTTTACTGTTCCCTTTG+TGG + Chr2:80899511-80899530 MsG0280011202.01.T01:intron 30.0%
AAAGTGGTTCATAAAGCTTC+TGG - Chr2:80900213-80900232 None:intergenic 35.0%
AAGAACACTCTTAATACCGA+AGG - Chr2:80898196-80898215 None:intergenic 35.0%
AATTGTAACCGTAGTGAAAC+AGG - Chr2:80900552-80900571 None:intergenic 35.0%
ACAAATATTTGGGGATTGCT+TGG + Chr2:80899762-80899781 MsG0280011202.01.T01:intron 35.0%
ACTCAACCTAGTAACAACTT+CGG + Chr2:80898707-80898726 MsG0280011202.01.T01:intron 35.0%
AGAACACTCTTAATACCGAA+GGG - Chr2:80898195-80898214 None:intergenic 35.0%
AGTAAACTTGACAATCCCAA+GGG + Chr2:80900973-80900992 MsG0280011202.01.T01:CDS 35.0%
AGTTACTTCCTGTTTCACTA+CGG + Chr2:80900541-80900560 MsG0280011202.01.T01:intron 35.0%
ATCAATTTCGTCATCATCCT+CGG - Chr2:80901339-80901358 None:intergenic 35.0%
ATCATCCTCCTTCTATCTAT+TGG + Chr2:80899667-80899686 MsG0280011202.01.T01:intron 35.0%
ATCTATCACAGAAAATGGCA+TGG - Chr2:80900904-80900923 None:intergenic 35.0%
ATGAGACACCAATAGATAGA+AGG - Chr2:80899678-80899697 None:intergenic 35.0%
ATTGCAGTTAACCAAAAGCT+AGG - Chr2:80900791-80900810 None:intergenic 35.0%
ATTGTAGAACGGAAATTGAG+TGG + Chr2:80901183-80901202 MsG0280011202.01.T01:intron 35.0%
CAACTTGAACCTTAACATAG+TGG - Chr2:80897514-80897533 None:intergenic 35.0%
CAAGTAACTCTGCCTATAAA+AGG + Chr2:80898052-80898071 MsG0280011202.01.T01:intron 35.0%
CACAAAAGGTTATGAAGAAG+AGG + Chr2:80901225-80901244 MsG0280011202.01.T01:CDS 35.0%
CAGAATCCACAATCAGTAAT+CGG - Chr2:80902358-80902377 None:intergenic 35.0%
CAGTGATCTATCACAGAAAA+TGG - Chr2:80900909-80900928 None:intergenic 35.0%
CCCTACTATTGATAAAGTGT+TGG - Chr2:80899017-80899036 None:intergenic 35.0%
CTTAACTCTCTGCTAAACTA+TGG + Chr2:80902391-80902410 MsG0280011202.01.T01:intron 35.0%
CTTCGGTAGATGATAGAATT+TGG + Chr2:80898724-80898743 MsG0280011202.01.T01:intron 35.0%
GAAATGAAGAAAACTGGCAA+AGG - Chr2:80899099-80899118 None:intergenic 35.0%
GAATATGAACCTAAGACCAA+GGG - Chr2:80898230-80898249 None:intergenic 35.0%
GCTACTCATTATAGAACACA+AGG - Chr2:80899848-80899867 None:intergenic 35.0%
GGGATACAGATTCCTTAATT+CGG + Chr2:80902309-80902328 MsG0280011202.01.T01:intron 35.0%
GTCACGGATACAAATATTTG+GGG + Chr2:80899753-80899772 MsG0280011202.01.T01:intron 35.0%
GTGATGACAAGAATGAGAAA+TGG - Chr2:80899190-80899209 None:intergenic 35.0%
GTTAATCAAACAGTTGTAGC+TGG + Chr2:80898589-80898608 MsG0280011202.01.T01:intron 35.0%
TAAGAAAACACGTTTGCTTG+AGG + Chr2:80897960-80897979 MsG0280011202.01.T01:intron 35.0%
TTGCAGTTAACCAAAAGCTA+GGG - Chr2:80900790-80900809 None:intergenic 35.0%
TTTATAGGCAGAGTTACTTG+GGG - Chr2:80898052-80898071 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG + Chr2:80898531-80898550 MsG0280011202.01.T01:intron 35.0%
! AAGCATCAACTGTGAGATTT+TGG - Chr2:80898104-80898123 None:intergenic 35.0%
! AATGAACTTTTACAGGAGTG+GGG - Chr2:80899041-80899060 None:intergenic 35.0%
! AGAATGAACTTTTACAGGAG+TGG - Chr2:80899043-80899062 None:intergenic 35.0%
! ATACATTTTGCGACACTGTT+TGG + Chr2:80900281-80900300 MsG0280011202.01.T01:intron 35.0%
! CGTAGTGTCTAATTTTCTGA+TGG + Chr2:80900518-80900537 MsG0280011202.01.T01:intron 35.0%
! CTTTTATAGGCAGAGTTACT+TGG - Chr2:80898054-80898073 None:intergenic 35.0%
! GAATGAACTTTTACAGGAGT+GGG - Chr2:80899042-80899061 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG + Chr2:80898380-80898399 MsG0280011202.01.T01:intron 35.0%
! TACATTTTGCGACACTGTTT+GGG + Chr2:80900282-80900301 MsG0280011202.01.T01:intron 35.0%
! TTTACACAAAGGTGTGTGTT+TGG + Chr2:80900230-80900249 MsG0280011202.01.T01:intron 35.0%
!! AATGGTGTTATTGACGTTGA+AGG + Chr2:80900619-80900638 MsG0280011202.01.T01:CDS 35.0%
!! ACGATTGAGCCATATTTTGA+GGG + Chr2:80898532-80898551 MsG0280011202.01.T01:intron 35.0%
!! AGCACGGAATTTTGGAAATA+AGG - Chr2:80901030-80901049 None:intergenic 35.0%
!! ATTTTGGTGTGAAGAATGAG+TGG - Chr2:80898088-80898107 None:intergenic 35.0%
!! GAAATGTTTGCTGTTTCTGT+AGG + Chr2:80899544-80899563 MsG0280011202.01.T01:intron 35.0%
!! TACTCAATGAAGCATTGACA+AGG - Chr2:80900004-80900023 None:intergenic 35.0%
!! TTAGTCTTGTTCAACAGTGT+AGG + Chr2:80900699-80900718 MsG0280011202.01.T01:intron 35.0%
!! TTTTGGAGAAGTTAGAATGG+TGG + Chr2:80898397-80898416 MsG0280011202.01.T01:intron 35.0%
!! TTTTGGTGTGAAGAATGAGT+GGG - Chr2:80898087-80898106 None:intergenic 35.0%
!!! AACCATTTTGAAGTCAAGTG+GGG + Chr2:80897592-80897611 MsG0280011202.01.T01:intron 35.0%
!!! GAAACCATTTTGAAGTCAAG+TGG + Chr2:80897590-80897609 MsG0280011202.01.T01:intron 35.0%
!!! GCAGTTTACACTTTTAGGAT+CGG + Chr2:80898796-80898815 MsG0280011202.01.T01:intron 35.0%
AAACACTTTCGCCTAATGTC+AGG + Chr2:80899609-80899628 MsG0280011202.01.T01:CDS 40.0%
AATTACAAACGAAGCAGGAC+AGG + Chr2:80900642-80900661 MsG0280011202.01.T01:CDS 40.0%
ACACACACCTTTGTGTAAAG+TGG - Chr2:80900229-80900248 None:intergenic 40.0%
AGACACCAATAGATAGAAGG+AGG - Chr2:80899675-80899694 None:intergenic 40.0%
AGACAGAGATGAAGATGAAG+AGG + Chr2:80902203-80902222 MsG0280011202.01.T01:CDS 40.0%
AGCATGAATTGTCTTCCTTC+CGG - Chr2:80902029-80902048 None:intergenic 40.0%
AGTCTACCTTGCACAACTTT+GGG + Chr2:80898644-80898663 MsG0280011202.01.T01:intron 40.0%
AGTGAAATTGATGTTACCGG+CGG - Chr2:80899163-80899182 None:intergenic 40.0%
ATAGATCACTGAACGTGATG+AGG + Chr2:80900918-80900937 MsG0280011202.01.T01:intron 40.0%
ATGAAGAAAACTGGCAAAGG+AGG - Chr2:80899096-80899115 None:intergenic 40.0%
ATGAAGAAGAGGCCAAAGAA+AGG + Chr2:80901236-80901255 MsG0280011202.01.T01:CDS 40.0%
ATGGGAAAAGTGACCTCTAA+GGG + Chr2:80897745-80897764 MsG0280011202.01.T01:intron 40.0%
ATTACAAACGAAGCAGGACA+GGG + Chr2:80900643-80900662 MsG0280011202.01.T01:CDS 40.0%
ATTCTGCCTCGAAATTCCAT+AGG - Chr2:80897340-80897359 None:intergenic 40.0%
CAGCAGATTATGCCGAATTA+AGG - Chr2:80902324-80902343 None:intergenic 40.0%
CATCTACCGAAGTTGTTACT+AGG - Chr2:80898716-80898735 None:intergenic 40.0%
CCTAAGTTCCACATTCGTAT+AGG - Chr2:80897312-80897331 None:intergenic 40.0%
CCTATACGAATGTGGAACTT+AGG + Chr2:80897309-80897328 MsG0280011202.01.T01:CDS 40.0%
CCTATGAAAAGGTTTGTGTG+TGG + Chr2:80897428-80897447 MsG0280011202.01.T01:intron 40.0%
CGTATAGGTGAGTCTATCAA+GGG - Chr2:80897297-80897316 None:intergenic 40.0%
CTCATTCGCTATATCAGTGA+CGG - Chr2:80898908-80898927 None:intergenic 40.0%
GAAGGAATTACAAACGAAGC+AGG + Chr2:80900637-80900656 MsG0280011202.01.T01:CDS 40.0%
GAGTAAACTTGACAATCCCA+AGG + Chr2:80900972-80900991 MsG0280011202.01.T01:CDS 40.0%
GGAATATGAACCTAAGACCA+AGG - Chr2:80898231-80898250 None:intergenic 40.0%
GGACAAACAACTTATAGCAC+AGG - Chr2:80900489-80900508 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG + Chr2:80898438-80898457 MsG0280011202.01.T01:intron 40.0%
GTGACAACATGAAAAAGGGA+AGG + Chr2:80898956-80898975 MsG0280011202.01.T01:intron 40.0%
GTGGTAACACCATATTTGAG+TGG + Chr2:80898416-80898435 MsG0280011202.01.T01:intron 40.0%
GTGGTATCACCATATTTGAG+TGG + Chr2:80898355-80898374 MsG0280011202.01.T01:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG - Chr2:80897786-80897805 None:intergenic 40.0%
GTTGAGTGCAAAACTGCTTA+TGG + Chr2:80901722-80901741 MsG0280011202.01.T01:intron 40.0%
TAGACTCACCTATACGAATG+TGG + Chr2:80897301-80897320 MsG0280011202.01.T01:CDS 40.0%
TAGTCTACCTTGCACAACTT+TGG + Chr2:80898643-80898662 MsG0280011202.01.T01:intron 40.0%
TATGGGAAAAGTGACCTCTA+AGG + Chr2:80897744-80897763 MsG0280011202.01.T01:intron 40.0%
TCAATTTCGTCATCATCCTC+GGG - Chr2:80901338-80901357 None:intergenic 40.0%
TCAGTTGACTGATCTTTACC+AGG - Chr2:80902482-80902501 None:intergenic 40.0%
TCGTATAGGTGAGTCTATCA+AGG - Chr2:80897298-80897317 None:intergenic 40.0%
TCTGCTAAACTATGGGTAAC+TGG + Chr2:80902399-80902418 MsG0280011202.01.T01:intron 40.0%
TGACTGATCTTTACCAGGTT+TGG - Chr2:80902477-80902496 None:intergenic 40.0%
TGCAGTTGAAAAATGTCGAG+CGG + Chr2:80898875-80898894 MsG0280011202.01.T01:intron 40.0%
TGTTGGTGTGTGAGATTAGT+TGG - Chr2:80899000-80899019 None:intergenic 40.0%
TGTTTGTCTTAACTGCAGAG+TGG + Chr2:80902443-80902462 MsG0280011202.01.T01:intron 40.0%
TTAATACCGAAGGGACAGAA+AGG - Chr2:80898186-80898205 None:intergenic 40.0%
TTATTCCTCATGCTGTGTCA+TGG + Chr2:80902121-80902140 MsG0280011202.01.T01:CDS 40.0%
TTCTTAAGACCATAGTCCCT+TGG + Chr2:80898211-80898230 MsG0280011202.01.T01:intron 40.0%
TTGAACGGTTTCGAATAGAG+CGG + Chr2:80898479-80898498 MsG0280011202.01.T01:intron 40.0%
TTTGTGTCAAGCACTTTCCT+GGG - Chr2:80901211-80901230 None:intergenic 40.0%
! ACACCTTCGATTAGAAGTGT+CGG - Chr2:80899883-80899902 None:intergenic 40.0%
! CAACGGCAGTTTACACTTTT+AGG + Chr2:80898791-80898810 MsG0280011202.01.T01:intron 40.0%
! CCACACACAAACCTTTTCAT+AGG - Chr2:80897431-80897450 None:intergenic 40.0%
! CCTAGAGCATTCGTTAAAAC+CGG + Chr2:80897361-80897380 MsG0280011202.01.T01:CDS 40.0%
! CTAGAGCATTCGTTAAAACC+GGG + Chr2:80897362-80897381 MsG0280011202.01.T01:CDS 40.0%
! TAGAGGTACGAGATTGTCAA+TGG + Chr2:80900601-80900620 MsG0280011202.01.T01:intron 40.0%
! TCAGATCCGATTACTGATTG+TGG + Chr2:80902349-80902368 MsG0280011202.01.T01:intron 40.0%
! TGAGGTTCTCAAAGTTTTGC+AGG + Chr2:80899640-80899659 MsG0280011202.01.T01:CDS 40.0%
! TGATGATGATGACGATGAAG+AGG + Chr2:80902227-80902246 MsG0280011202.01.T01:CDS 40.0%
! TGTGTGAGATTAGTTGGACT+TGG - Chr2:80898994-80899013 None:intergenic 40.0%
! TTTGGTGTGAAGAATGAGTG+GGG - Chr2:80898086-80898105 None:intergenic 40.0%
! TTTTGTGTCAAGCACTTTCC+TGG - Chr2:80901212-80901231 None:intergenic 40.0%
!! AGGAAAGTGCTTGACACAAA+AGG + Chr2:80901211-80901230 MsG0280011202.01.T01:CDS 40.0%
!! TTGGTATCCGTTAGTCTTGA+TGG + Chr2:80901569-80901588 MsG0280011202.01.T01:intron 40.0%
!!! ACCATTTTGAAGTCAAGTGG+GGG + Chr2:80897593-80897612 MsG0280011202.01.T01:intron 40.0%
AAACTCCAGCTTGAAACCCT+TGG - Chr2:80900992-80901011 None:intergenic 45.0%
AACCTAAGACCAAGGGACTA+TGG - Chr2:80898223-80898242 None:intergenic 45.0%
AACTCCAGCTTGAAACCCTT+GGG - Chr2:80900991-80901010 None:intergenic 45.0%
AAGAAAACTGGCAAAGGAGG+AGG - Chr2:80899093-80899112 None:intergenic 45.0%
AGAAAACTGGCAAAGGAGGA+GGG - Chr2:80899092-80899111 None:intergenic 45.0%
ATAAGCTTCAGCTCTTGGCT+GGG + Chr2:80899567-80899586 MsG0280011202.01.T01:CDS 45.0%
ATGATGAGGAGGAAGACGAA+GGG + Chr2:80902262-80902281 MsG0280011202.01.T01:CDS 45.0%
CACAAAATTGGGTACCCCAA+GGG - Chr2:80897775-80897794 None:intergenic 45.0%
CATGCAAGAAACAGAGGCAA+TGG - Chr2:80901427-80901446 None:intergenic 45.0%
CCGAATGCCATCAAGACTAA+CGG - Chr2:80901579-80901598 None:intergenic 45.0%
CCTATCCATGCAAGAAACAG+AGG - Chr2:80901433-80901452 None:intergenic 45.0%
CGTTCACCCGTTCACAAAAT+TGG - Chr2:80897787-80897806 None:intergenic 45.0%
GAAGAAAGCAAAGCTGCTGA+AGG + Chr2:80900667-80900686 MsG0280011202.01.T01:CDS 45.0%
GCACAGGCACTTATCATGAT+AGG - Chr2:80900473-80900492 None:intergenic 45.0%
GCACTACGACCACTCAAATA+TGG - Chr2:80898367-80898386 None:intergenic 45.0%
GCAGAGCGAACATGATGAAT+TGG + Chr2:80900144-80900163 MsG0280011202.01.T01:intron 45.0%
GCGTAAAACGCGTTTGCTTA+AGG + Chr2:80898010-80898029 MsG0280011202.01.T01:intron 45.0%
GGAAGAACAAGAGCAAGGTA+GGG + Chr2:80902289-80902308 MsG0280011202.01.T01:intron 45.0%
GGATGAGGATGAAGATGATG+AGG + Chr2:80902248-80902267 MsG0280011202.01.T01:CDS 45.0%
GTAGGATAAGCTTCAGCTCT+TGG + Chr2:80899562-80899581 MsG0280011202.01.T01:intron 45.0%
GTGCTGAGACCACTCAAATA+TGG - Chr2:80898428-80898447 None:intergenic 45.0%
GTTCCACTTGATCACAAGCA+TGG - Chr2:80901796-80901815 None:intergenic 45.0%
TAATGTCAGGCAACGTGTTG+AGG + Chr2:80899622-80899641 MsG0280011202.01.T01:CDS 45.0%
TATCCGGAAGCTTCTGGATA+CGG - Chr2:80897932-80897951 None:intergenic 45.0%
TCAACACGTTGCCTGACATT+AGG - Chr2:80899623-80899642 None:intergenic 45.0%
TCACAAAATTGGGTACCCCA+AGG - Chr2:80897776-80897795 None:intergenic 45.0%
TCATGCTGTGTCATGGTTCA+CGG + Chr2:80902128-80902147 MsG0280011202.01.T01:CDS 45.0%
TCCCCCACTTGACTTCAAAA+TGG - Chr2:80897597-80897616 None:intergenic 45.0%
TCTACTCCTTTCTGTCCCTT+CGG + Chr2:80898177-80898196 MsG0280011202.01.T01:intron 45.0%
TGAGGATGAAGATGATGAGG+AGG + Chr2:80902251-80902270 MsG0280011202.01.T01:CDS 45.0%
TGATGATAGATGTCACCGGA+AGG + Chr2:80902011-80902030 MsG0280011202.01.T01:intron 45.0%
TGGAAATATCCGGAAGCTTC+TGG - Chr2:80897938-80897957 None:intergenic 45.0%
TTAACTGCAGAGTGGTAGCA+AGG + Chr2:80902451-80902470 MsG0280011202.01.T01:intron 45.0%
TTCTGGATACGGGTTTGGAT+CGG - Chr2:80897921-80897940 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG - Chr2:80898512-80898531 None:intergenic 45.0%
! CATTGCCTCTGTTTCTTGCA+TGG + Chr2:80901425-80901444 MsG0280011202.01.T01:intron 45.0%
! CCTCTGTTTCTTGCATGGAT+AGG + Chr2:80901430-80901449 MsG0280011202.01.T01:intron 45.0%
! CTAAAAGCCCGTGCGTTTTA+AGG - Chr2:80897402-80897421 None:intergenic 45.0%
! CTGGTGATGATAGATGTCAC+CGG + Chr2:80902007-80902026 MsG0280011202.01.T01:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG + Chr2:80897778-80897797 MsG0280011202.01.T01:intron 45.0%
! TGATGACGATGAAGAGGATG+AGG + Chr2:80902233-80902252 MsG0280011202.01.T01:CDS 45.0%
! TTAGCCTGTTTTCGTGTGTG+TGG + Chr2:80899699-80899718 MsG0280011202.01.T01:intron 45.0%
!! AAAAATGGTGGGGGCATTTG+CGG + Chr2:80901981-80902000 MsG0280011202.01.T01:intron 45.0%
!! AGAAAGGAGTCCCTAGCTTT+TGG + Chr2:80900777-80900796 MsG0280011202.01.T01:CDS 45.0%
!! CATGTATCGGTGTCAGACAT+AGG - Chr2:80899908-80899927 None:intergenic 45.0%
!! CCGGTTTTAACGAATGCTCT+AGG - Chr2:80897364-80897383 None:intergenic 45.0%
!! CCGTTAGTCTTGATGGCATT+CGG + Chr2:80901576-80901595 MsG0280011202.01.T01:intron 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG - Chr2:80898675-80898694 None:intergenic 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG + Chr2:80897777-80897796 MsG0280011202.01.T01:intron 45.0%
!! TAGAAGTGTCGGTGCTACAA+AGG - Chr2:80899872-80899891 None:intergenic 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG + Chr2:80898605-80898624 MsG0280011202.01.T01:intron 45.0%
AAAAAGGGAAGGCCCATGCT+AGG + Chr2:80898967-80898986 MsG0280011202.01.T01:intron 50.0%
AAAACCGGGATACACGTGCA+GGG + Chr2:80897376-80897395 MsG0280011202.01.T01:intron 50.0%
AACCCGTATCCAGAAGCTTC+CGG + Chr2:80897926-80897945 MsG0280011202.01.T01:intron 50.0%
ACGTCTTAAAGAGAGCGACC+TGG + Chr2:80898679-80898698 MsG0280011202.01.T01:intron 50.0%
AGTTGGACTTGGACCTAGCA+TGG - Chr2:80898983-80899002 None:intergenic 50.0%
ATCCGGAAGCTTCTGGATAC+GGG - Chr2:80897931-80897950 None:intergenic 50.0%
CAATCCCAAGGGTTTCAAGC+TGG + Chr2:80900984-80901003 MsG0280011202.01.T01:CDS 50.0%
CATGCTGTGTCATGGTTCAC+GGG + Chr2:80902129-80902148 MsG0280011202.01.T01:CDS 50.0%
GAAATTGATGTTACCGGCGG+CGG - Chr2:80899160-80899179 None:intergenic 50.0%
GAAGCTTCTGGATACGGGTT+TGG - Chr2:80897926-80897945 None:intergenic 50.0%
GAAGGGGAAGAACAAGAGCA+AGG + Chr2:80902284-80902303 MsG0280011202.01.T01:CDS 50.0%
GAAGTCAAGTGGGGGATTGT+TGG + Chr2:80897601-80897620 MsG0280011202.01.T01:intron 50.0%
GAGAAGAGAGAAAACCGCAC+AGG - Chr2:80898127-80898146 None:intergenic 50.0%
GATAAGCTTCAGCTCTTGGC+TGG + Chr2:80899566-80899585 MsG0280011202.01.T01:CDS 50.0%
GATCACTGAACGTGATGAGG+AGG + Chr2:80900921-80900940 MsG0280011202.01.T01:intron 50.0%
GATGATGAGGAGGAAGACGA+AGG + Chr2:80902261-80902280 MsG0280011202.01.T01:CDS 50.0%
GCAAAACTGCTTATGGCGCA+TGG + Chr2:80901729-80901748 MsG0280011202.01.T01:intron 50.0%
GCACTACCCAAAGTTGTGCA+AGG - Chr2:80898653-80898672 None:intergenic 50.0%
GCCAGTCCTATGGAATTTCG+AGG + Chr2:80897331-80897350 MsG0280011202.01.T01:CDS 50.0%
GCCTCGAAATTCCATAGGAC+TGG - Chr2:80897335-80897354 None:intergenic 50.0%
GGGAAGAACAAGAGCAAGGT+AGG + Chr2:80902288-80902307 MsG0280011202.01.T01:intron 50.0%
GTCATCATCCTCGGGAATCT+GGG - Chr2:80901330-80901349 None:intergenic 50.0%
GTGAACCATGACACAGCATG+AGG - Chr2:80902129-80902148 None:intergenic 50.0%
GTGCCATGCTTGTGATCAAG+TGG + Chr2:80901790-80901809 MsG0280011202.01.T01:intron 50.0%
GTTGGACTTGGACCTAGCAT+GGG - Chr2:80898982-80899001 None:intergenic 50.0%
TAAAACCGGGATACACGTGC+AGG + Chr2:80897375-80897394 MsG0280011202.01.T01:intron 50.0%
TAAGCTTCAGCTCTTGGCTG+GGG + Chr2:80899568-80899587 MsG0280011202.01.T01:CDS 50.0%
TCATCATCCTCGGGAATCTG+GGG - Chr2:80901329-80901348 None:intergenic 50.0%
TCTGGATACGGGTTTGGATC+GGG - Chr2:80897920-80897939 None:intergenic 50.0%
TGGAACTTAGGCCAGTCCTA+TGG + Chr2:80897321-80897340 MsG0280011202.01.T01:CDS 50.0%
TTAGACACTACGGGCCTGTT+TGG - Chr2:80900510-80900529 None:intergenic 50.0%
TTGGGGTGACCCTTCAATGT+GGG - Chr2:80897708-80897727 None:intergenic 50.0%
TTTAGAGGAGCGAGCTCAGT+TGG + Chr2:80900177-80900196 MsG0280011202.01.T01:CDS 50.0%
! AACGCGTTTTACGCGTGACT+TGG - Chr2:80898004-80898023 None:intergenic 50.0%
! ACGCGTTTTACGCGTGACTT+GGG - Chr2:80898003-80898022 None:intergenic 50.0%
! ACTGCTGCTTGCAATCAGCA+GGG - Chr2:80902508-80902527 None:intergenic 50.0%
! CACAGTTGATGCTTCCTGTG+CGG + Chr2:80898110-80898129 MsG0280011202.01.T01:intron 50.0%
! GACCATAGTCCCTTGGTCTT+AGG + Chr2:80898218-80898237 MsG0280011202.01.T01:intron 50.0%
! GCACCGACACTTCTAATCGA+AGG + Chr2:80899877-80899896 MsG0280011202.01.T01:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG - Chr2:80898700-80898719 None:intergenic 50.0%
! TACTGCTGCTTGCAATCAGC+AGG - Chr2:80902509-80902528 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG + Chr2:80898608-80898627 MsG0280011202.01.T01:intron 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG + Chr2:80898611-80898630 MsG0280011202.01.T01:intron 50.0%
ACGGAAATTGAGTGGCACCC+AGG + Chr2:80901191-80901210 MsG0280011202.01.T01:CDS 55.0%
AGGAGGAAGACGAAGGGAAG+GGG + Chr2:80902268-80902287 MsG0280011202.01.T01:CDS 55.0%
AGTGGTAGCAAGGCCAAACC+TGG + Chr2:80902461-80902480 MsG0280011202.01.T01:CDS 55.0%
CGGTTACGTACCGTATCGAG+TGG + Chr2:80898499-80898518 MsG0280011202.01.T01:intron 55.0%
CGTCATCATCCTCGGGAATC+TGG - Chr2:80901331-80901350 None:intergenic 55.0%
CTGGCAAAGGAGGAGGGAAA+TGG - Chr2:80899086-80899105 None:intergenic 55.0%
GAGGAGGAAGACGAAGGGAA+GGG + Chr2:80902267-80902286 MsG0280011202.01.T01:CDS 55.0%
GATACGGGTTTGGATCGGGT+CGG - Chr2:80897916-80897935 None:intergenic 55.0%
GCAGCCACACACACGAAAAC+AGG - Chr2:80899706-80899725 None:intergenic 55.0%
GTGCAGGGCCTTAAAACGCA+CGG + Chr2:80897391-80897410 MsG0280011202.01.T01:intron 55.0%
GTTGGGGTGACCCTTCAATG+TGG - Chr2:80897709-80897728 None:intergenic 55.0%
TGAGGAGGAAGACGAAGGGA+AGG + Chr2:80902266-80902285 MsG0280011202.01.T01:CDS 55.0%
TGAGTGGGGTACACAGCTAC+AGG + Chr2:80897267-80897286 MsG0280011202.01.T01:CDS 55.0%
TGCAGGGCCTTAAAACGCAC+GGG + Chr2:80897392-80897411 MsG0280011202.01.T01:intron 55.0%
TGGGGATCGTGTGGATGTCA+TGG + Chr2:80899586-80899605 MsG0280011202.01.T01:CDS 55.0%
TGTGTCATGGTTCACGGGAG+AGG + Chr2:80902134-80902153 MsG0280011202.01.T01:CDS 55.0%
! ACCTCTAAGGGTGTGCCCTT+GGG + Chr2:80897757-80897776 MsG0280011202.01.T01:intron 55.0%
! CGCGTTTTACGCGTGACTTG+GGG - Chr2:80898002-80898021 None:intergenic 55.0%
! CTCAGTGCTGAAGATCGTGC+TGG + Chr2:80899330-80899349 MsG0280011202.01.T01:CDS 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG - Chr2:80898067-80898086 None:intergenic 55.0%
!! GGGAAGATCGGCGGATTGAT+CGG - Chr2:80899133-80899152 None:intergenic 55.0%
AAGGCCCTGCACGTGTATCC+CGG - Chr2:80897383-80897402 None:intergenic 60.0%
CATCCTCGGGAATCTGGGGA+GGG - Chr2:80901325-80901344 None:intergenic 60.0%
TCATCCTCGGGAATCTGGGG+AGG - Chr2:80901326-80901345 None:intergenic 60.0%
! CCTCTAAGGGTGTGCCCTTG+GGG + Chr2:80897758-80897777 MsG0280011202.01.T01:intron 60.0%
! GACCTCTAAGGGTGTGCCCT+TGG + Chr2:80897756-80897775 MsG0280011202.01.T01:intron 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG + Chr2:80898616-80898635 MsG0280011202.01.T01:intron 60.0%
!! GTGGGGGCATTTGCGGAATC+TGG + Chr2:80901988-80902007 MsG0280011202.01.T01:intron 60.0%
CAACCCTCCCCAGATTCCCG+AGG + Chr2:80901319-80901338 MsG0280011202.01.T01:CDS 65.0%
CTATCAACCACGCCGCCTCC+AGG - Chr2:80898626-80898645 None:intergenic 65.0%
GCTCTTGGCTGGGGATCGTG+TGG + Chr2:80899577-80899596 MsG0280011202.01.T01:CDS 65.0%
! CCCCAAGGGCACACCCTTAG+AGG - Chr2:80897761-80897780 None:intergenic 65.0%
ATGTTACCGGCGGCGGCAGC+GGG - Chr2:80899153-80899172 None:intergenic 70.0%
GATGTTACCGGCGGCGGCAG+CGG - Chr2:80899154-80899173 None:intergenic 70.0%
GATCTTCCCGCTGCCGCCGC+CGG + Chr2:80899144-80899163 MsG0280011202.01.T01:CDS 75.0%
GGCGGCAGCGGGAAGATCGG+CGG - Chr2:80899142-80899161 None:intergenic 75.0%
GGCGGCGGCAGCGGGAAGAT+CGG - Chr2:80899145-80899164 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 80897263 80902529 80897263 ID=MsG0280011202.01;Name=MsG0280011202.01
Chr2 mRNA 80897263 80902529 80897263 ID=MsG0280011202.01.T01;Parent=MsG0280011202.01;Name=MsG0280011202.01.T01;_AED=0.50;_eAED=0.58;_QI=0|0|0|1|0.81|0.75|12|0|426
Chr2 exon 80897263 80897390 80897263 ID=MsG0280011202.01.T01:exon:28592;Parent=MsG0280011202.01.T01
Chr2 exon 80899106 80899165 80899106 ID=MsG0280011202.01.T01:exon:28593;Parent=MsG0280011202.01.T01
Chr2 exon 80899296 80899371 80899296 ID=MsG0280011202.01.T01:exon:28594;Parent=MsG0280011202.01.T01
Chr2 exon 80899566 80899661 80899566 ID=MsG0280011202.01.T01:exon:28595;Parent=MsG0280011202.01.T01
Chr2 exon 80900148 80900240 80900148 ID=MsG0280011202.01.T01:exon:28596;Parent=MsG0280011202.01.T01
Chr2 exon 80900604 80900688 80900604 ID=MsG0280011202.01.T01:exon:28597;Parent=MsG0280011202.01.T01
Chr2 exon 80900777 80900838 80900777 ID=MsG0280011202.01.T01:exon:28598;Parent=MsG0280011202.01.T01
Chr2 exon 80900922 80901106 80900922 ID=MsG0280011202.01.T01:exon:28599;Parent=MsG0280011202.01.T01
Chr2 exon 80901190 80901367 80901190 ID=MsG0280011202.01.T01:exon:28600;Parent=MsG0280011202.01.T01
Chr2 exon 80901452 80901495 80901452 ID=MsG0280011202.01.T01:exon:28601;Parent=MsG0280011202.01.T01
Chr2 exon 80902101 80902305 80902101 ID=MsG0280011202.01.T01:exon:28602;Parent=MsG0280011202.01.T01
Chr2 exon 80902461 80902529 80902461 ID=MsG0280011202.01.T01:exon:28603;Parent=MsG0280011202.01.T01
Chr2 CDS 80897263 80897390 80897263 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80899106 80899165 80899106 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80899296 80899371 80899296 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80899566 80899661 80899566 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80900148 80900240 80900148 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80900604 80900688 80900604 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80900777 80900838 80900777 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80900922 80901106 80900922 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80901190 80901367 80901190 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80901452 80901495 80901452 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80902101 80902305 80902101 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Chr2 CDS 80902461 80902529 80902461 ID=MsG0280011202.01.T01:cds;Parent=MsG0280011202.01.T01
Gene Sequence

>MsG0280011202.01.T01

ATGTTGAGTGGGGTACACAGCTACAGGAGTACCCTTGATAGACTCACCTATACGAATGTGGAACTTAGGCCAGTCCTATGGAATTTCGAGGCAGAATTCCTAGAGCATTCGTTAAAACCGGGATACACTTTTCTTCATTTCTTTCATCATGTCCGATCAATCCGCCGATCTTCCCGCTGCCGCCGCCGGTCTAAATTATACTGTTGCTTTTTTCTTGTAGCTCTCAGTGCTGAAGATCGTGCTGGTCTCGTCAATGCACTCAAAGATAAGCTTCAGCTCTTGGCTGGGGATCGTGTGGATGTCATGGAAACACTTTCGCCTAATGTCAGGCAACGTGTTGAGGTTCTCAAAGTTTTGCAGAGCGAACATGATGAATTGGAGAGTAAGTTTTTAGAGGAGCGAGCTCAGTTGGAAGCTAAATACCAGAAGCTTTATGAACCACTTTACACAAAGAGGTACGAGATTGTCAATGGTGTTATTGACGTTGAAGGAATTACAAACGAAGCAGGACAGGGAGAAGAAAGCAAAGCTGCTGAAGAGAAAGGAGTCCCTAGCTTTTGGTTAACTGCAATGAAGACTAATGAAATATTGGGTGAAGAGATCACTGAACGTGATGAGGAGGCTCTCAAGTATCTCAAAGATATCAAGTGGAGTAAACTTGACAATCCCAAGGGTTTCAAGCTGGAGTTTTATTTTGATTCTAATCCTTATTTCCAAAATTCCGTGCTAACAAAAACATATCACATGATTGAAGATGATGACCCTATATTAGAGAAATCAATAGGAACGGAAATTGAGTGGCACCCAGGAAAGTGCTTGACACAAAAGGTTATGAAGAAGAGGCCAAAGAAAGGATCAAAAAATGCCAAACCAATCATAAAAACAGAAAAATGTGATAGTTTCTTCAACATTTTCAACCCTCCCCAGATTCCCGAGGATGATGACGAAATTGATGACGATGTTGTTGAAGAGCTTCAAAATTTAATGGAGCATGATTATGATATTGGTTCTACAATCCGAGACAAAATTATTCCTCATGCTGTGTCATGGTTCACGGGAGAGGCTGTAGAGAGTGATTTTGACGATATAGAAGTAGATGAAGATGATGAAGACAGAGATGAAGATGAAGAGGATGATGATGATGACGATGAAGAGGATGAGGATGAAGATGATGAGGAGGAAGACGAAGGGAAGGGGAAGAACAAGAGCAAGAGTGGTAGCAAGGCCAAACCTGGTAAAGATCAGTCAACTGAGCGCCCTGCTGATTGCAAGCAGCAGTAG
Protein sequence

>MsG0280011202.01.T01

MLSGVHSYRSTLDRLTYTNVELRPVLWNFEAEFLEHSLKPGYTFLHFFHHVRSIRRSSRCRRRSKLYCCFFLVALSAEDRAGLVNALKDKLQLLAGDRVDVMETLSPNVRQRVEVLKVLQSEHDELESKFLEERAQLEAKYQKLYEPLYTKRYEIVNGVIDVEGITNEAGQGEESKAAEEKGVPSFWLTAMKTNEILGEEITERDEEALKYLKDIKWSKLDNPKGFKLEFYFDSNPYFQNSVLTKTYHMIEDDDPILEKSIGTEIEWHPGKCLTQKVMKKRPKKGSKNAKPIIKTEKCDSFFNIFNPPQIPEDDDEIDDDVVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAVESDFDDIEVDEDDEDRDEDEEDDDDDDEEDEDEDDEEEDEGKGKNKSKSGSKAKPGKDQSTERPADCKQQ*