AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011306.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011306.01.T01 MTR_2g101880 83.790 438 29 4 1 411 98 520 0.0 715
MsG0280011306.01.T01 MTR_2g093500 76.880 359 40 4 61 411 197 520 0.0 515
MsG0280011306.01.T01 MTR_2g094180 29.668 391 241 3 15 386 126 501 3.77e-60 205
MsG0280011306.01.T01 MTR_4g059450 31.552 393 231 5 16 387 149 524 2.04e-59 203
MsG0280011306.01.T01 MTR_3g088220 25.000 428 249 14 2 388 70 466 7.76e-23 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011306.01.T01 AT3G16110 50.569 439 174 5 1 411 111 534 2.07e-151 439
MsG0280011306.01.T01 AT1G52260 50.000 440 176 6 1 411 113 537 2.01e-146 427
MsG0280011306.01.T01 AT5G60640 29.298 413 256 4 2 395 140 535 3.68e-61 207
MsG0280011306.01.T01 AT5G60640 29.310 406 251 4 2 388 140 528 1.52e-60 206
MsG0280011306.01.T01 AT3G54960 28.148 405 253 6 2 386 136 522 2.66e-50 179
MsG0280011306.01.T01 AT3G54960 28.205 390 242 6 2 371 136 507 1.67e-46 167
MsG0280011306.01.T01 AT5G60640 28.316 392 209 8 2 388 140 464 2.94e-44 161
MsG0280011306.01.T01 AT1G21750 25.121 414 256 12 2 383 67 458 4.66e-24 104
MsG0280011306.01.T01 AT1G21750 25.121 414 256 12 2 383 67 458 4.69e-24 104
MsG0280011306.01.T01 AT1G77510 24.228 421 250 12 2 383 66 456 1.76e-21 96.7

Find 87 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAATTCTTTGAAAGATTT+TGG 0.089611 2:+82183670 MsG0280011306.01.T01:CDS
CACCATATGTTATATCTTTC+AGG 0.109359 2:-82186209 None:intergenic
TGAAATGAAACTGATTTAAA+AGG 0.135903 2:-82183249 None:intergenic
TATGAGTTTGTTCTTGTTCT+TGG 0.207274 2:+82183592 MsG0280011306.01.T01:five_prime_UTR
CTCACAAATTCTTCATATTC+AGG 0.208421 2:-82186068 None:intergenic
ATAACACTTACTTGCAGTTT+TGG 0.236921 2:-82188553 None:intergenic
AACGAACTGGGTTTCATTAT+CGG 0.273450 2:-82186102 None:intergenic
CCAGGGATGATATAGTTATA+TGG 0.298093 2:+82185777 MsG0280011306.01.T01:intron
GGGACTTCTCAACCTTATTC+TGG 0.302350 2:+82183793 MsG0280011306.01.T01:CDS
CATACGGTTCTCACATTATC+AGG 0.308837 2:-82187490 None:intergenic
AAGCCCTTCCTGACAATGTT+TGG 0.312127 2:+82187137 MsG0280011306.01.T01:CDS
GAAATCTAGTTTGAAAGAAT+TGG 0.324131 2:+82188856 MsG0280011306.01.T01:intron
TAGTTATATGGGCAAGAAAA+AGG 0.325886 2:+82185789 MsG0280011306.01.T01:CDS
AACATGGGACCCTAAAATTT+AGG 0.332943 2:+82183189 MsG0280011306.01.T01:five_prime_UTR
AATGAGCTCAAAATTTCTAT+TGG 0.339596 2:+82187294 MsG0280011306.01.T01:CDS
AAAACAGAGAGAATTATTAA+TGG 0.349452 2:+82183568 MsG0280011306.01.T01:five_prime_UTR
TTTGTTCTATAGCTCATCTT+TGG 0.362837 2:-82188921 None:intergenic
TTACCAGTAGGCTTGATATC+TGG 0.364195 2:-82186161 None:intergenic
GACTTTAACGTGTTTGTTGA+TGG 0.366916 2:-82188885 None:intergenic
GGACCGGTACGCCTGTTATT+CGG 0.368158 2:+82185810 MsG0280011306.01.T01:CDS
ATGAACAATCCTTTGTGCTT+TGG 0.369989 2:-82183531 None:intergenic
TCTGTACTTATCCGAATAAC+AGG 0.370638 2:-82185821 None:intergenic
TTACACAAGAGGCTGTTTCC+AGG 0.378319 2:-82188005 None:intergenic
CCTTACTCACTTCAACGAAC+TGG 0.381222 2:-82186115 None:intergenic
GTTCTCACATTATCAGGTAT+TGG 0.390542 2:-82187484 None:intergenic
TGGCTAAGGTGGATGGTGAT+AGG 0.395436 2:+82183707 MsG0280011306.01.T01:CDS
TTGTGAAAAGATTAAAACTT+TGG 0.397026 2:-82183315 None:intergenic
CTTCAAGTCCAAACATTGTC+AGG 0.406857 2:-82187145 None:intergenic
TGAAAGTGAGTAATAAGAAA+AGG 0.412418 2:-82183391 None:intergenic
GCAGTGAAACCGCCAGAATA+AGG 0.416833 2:-82183805 None:intergenic
AAACAGAGAGAATTATTAAT+GGG 0.423977 2:+82183569 MsG0280011306.01.T01:five_prime_UTR
TGCCACATGTTGATTGCCCC+TGG 0.429294 2:+82186820 MsG0280011306.01.T01:CDS
GCTAGTGTTCAAGTTATTGT+TGG 0.429589 2:+82187829 MsG0280011306.01.T01:CDS
CTAGTGTTCAAGTTATTGTT+GGG 0.430931 2:+82187830 MsG0280011306.01.T01:CDS
GAAATGAAACTGATTTAAAA+GGG 0.430956 2:-82183248 None:intergenic
GTAATAAGAAAAGGGTTAGA+AGG 0.435787 2:-82183382 None:intergenic
AAGGGTTAGAAGGAAATTGA+TGG 0.446480 2:-82183372 None:intergenic
AAGGTCACGGGTTCAAGTCC+TGG 0.449453 2:+82187987 MsG0280011306.01.T01:intron
CAGGGATGATATAGTTATAT+GGG 0.451483 2:+82185778 MsG0280011306.01.T01:intron
GCAGATAATGTTTATATATG+TGG 0.452676 2:+82187091 MsG0280011306.01.T01:intron
TGATATCTGGATAAAGAACT+TGG 0.455272 2:-82186148 None:intergenic
TAGGTAGCTGCATTTGATAA+TGG 0.459475 2:+82187271 MsG0280011306.01.T01:intron
GAAAGTGAGTAATAAGAAAA+GGG 0.465790 2:-82183390 None:intergenic
GTTCTTGCTACTTCTTGAAG+TGG 0.473690 2:-82186982 None:intergenic
AAGCAAGCAAGTAGAGAAGT+TGG 0.475868 2:+82188465 MsG0280011306.01.T01:CDS
TGGACGCTTTGATAAATTTG+AGG 0.477543 2:+82185889 MsG0280011306.01.T01:CDS
TCACAAATTCTTCATATTCA+GGG 0.484612 2:-82186067 None:intergenic
CTCCTCAAATCTTGTTAACA+TGG 0.484862 2:+82183173 MsG0280011306.01.T01:five_prime_UTR
AACCTGAAAGATATAACATA+TGG 0.486298 2:+82186207 MsG0280011306.01.T01:CDS
CGATGAATTAGAGCGAGAAA+AGG 0.490504 2:+82183470 MsG0280011306.01.T01:five_prime_UTR
CCAGTTCGTTGAAGTGAGTA+AGG 0.492979 2:+82186115 MsG0280011306.01.T01:CDS
TCCCATGTTAACAAGATTTG+AGG 0.496340 2:-82183175 None:intergenic
AAGCAAATGATAAGACAAAT+CGG 0.498644 2:+82188730 MsG0280011306.01.T01:CDS
CTTACTCACTTCAACGAACT+GGG 0.500498 2:-82186114 None:intergenic
TTGTTCTTGGTTATGCACCT+TGG 0.519190 2:+82183605 MsG0280011306.01.T01:five_prime_UTR
TTTGAACAGCAAGAAGGATG+TGG 0.523070 2:+82187873 MsG0280011306.01.T01:CDS
TGCTTTGTAAAGTAAAAGTG+TGG 0.524790 2:-82188712 None:intergenic
AGCAAGAACTTTCAAGTCGA+AGG 0.533751 2:+82186996 MsG0280011306.01.T01:CDS
TTATCAACAGCAAAGCATCC+AGG 0.534990 2:-82186838 None:intergenic
ACTTCAATATTGCTTCGTGT+TGG 0.548950 2:-82187325 None:intergenic
TATCAACAGCAAAGCATCCA+GGG 0.552117 2:-82186837 None:intergenic
AAGTCCAAACATTGTCAGGA+AGG 0.556542 2:-82187141 None:intergenic
TATCCAGATATCAAGCCTAC+TGG 0.559989 2:+82186158 MsG0280011306.01.T01:CDS
ATGGTGAGATTGAGATCTGA+TGG 0.560097 2:-82183341 None:intergenic
AGTCCAAACATTGTCAGGAA+GGG 0.584516 2:-82187140 None:intergenic
AAGTACAGAGAAAGCAGCAG+AGG 0.586670 2:+82185835 MsG0280011306.01.T01:CDS
TCATGTGACCATAAGGTCAC+GGG 0.587103 2:+82187975 MsG0280011306.01.T01:intron
GATATCTGGATAAAGAACTT+GGG 0.587382 2:-82186147 None:intergenic
CAACAAACACGTTAAAGTCA+AGG 0.593096 2:+82188889 MsG0280011306.01.T01:CDS
GCTTTGTAAAGTAAAAGTGT+GGG 0.593935 2:-82188711 None:intergenic
TATCCGAATAACAGGCGTAC+CGG 0.594808 2:-82185813 None:intergenic
TTGTCAGGAAGGGCTTTGCA+AGG 0.600589 2:-82187130 None:intergenic
TCCTCAAATCTTGTTAACAT+GGG 0.610074 2:+82183174 MsG0280011306.01.T01:five_prime_UTR
TAAAACAGGTATTCACACCT+TGG 0.615751 2:+82188422 MsG0280011306.01.T01:intron
GTGTGAAATCTCTGAAGCAG+AGG 0.619935 2:+82183502 MsG0280011306.01.T01:five_prime_UTR
TTAGCAGCTTCAGCAAAATG+AGG 0.626528 2:-82183652 None:intergenic
GAGCGAGAAAAGGATCATGA+TGG 0.628062 2:+82183480 MsG0280011306.01.T01:five_prime_UTR
TGGTGAGATTGAGATCTGAT+GGG 0.631288 2:-82183340 None:intergenic
ACTTCTCAACCTTATTCTGG+CGG 0.638923 2:+82183796 MsG0280011306.01.T01:CDS
ACCTTGGTGTTTCAACTGTG+AGG 0.643924 2:+82188438 MsG0280011306.01.T01:CDS
ATCCAGGGGCAATCAACATG+TGG 0.656557 2:-82186822 None:intergenic
TGAAGAATCAACAAATACTG+TGG 0.674899 2:+82187163 MsG0280011306.01.T01:CDS
TCCTCACAGTTGAAACACCA+AGG 0.681229 2:-82188439 None:intergenic
ATCCCGAGAAAATTACCAGT+AGG 0.692322 2:-82186173 None:intergenic
ATCAACAGCAAAGCATCCAG+GGG 0.694678 2:-82186836 None:intergenic
TCAGCACTTCTTGAACACCA+AGG 0.725037 2:-82183622 None:intergenic
GGTGAGATTGAGATCTGATG+GGG 0.727513 2:-82183339 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAATATTAATAATGATAA+TGG + Chr2:82187785-82187804 MsG0280011306.01.T01:intron 10.0%
!!! AATTTAAAATTTTGATAACA+AGG - Chr2:82184316-82184335 None:intergenic 10.0%
!!! ATTTAAAATTTTGATAACAA+GGG - Chr2:82184315-82184334 None:intergenic 10.0%
!! AGTACTTATAGTAAAAAATA+TGG + Chr2:82184019-82184038 MsG0280011306.01.T01:intron 15.0%
!! ATCCAATTATAAATAAAACT+TGG - Chr2:82186753-82186772 None:intergenic 15.0%
!! ATTTATAATTGGATATTCAA+TGG + Chr2:82186759-82186778 MsG0280011306.01.T01:intron 15.0%
!! ATTTATTCACTTAAATTGAA+AGG - Chr2:82187627-82187646 None:intergenic 15.0%
!!! AACTTATACAAATTATTTCT+TGG + Chr2:82187239-82187258 MsG0280011306.01.T01:intron 15.0%
!!! CATTTTATCCATAAAAAAAT+TGG - Chr2:82188225-82188244 None:intergenic 15.0%
!!! TATTCTTTTATACATATAGT+TGG + Chr2:82187674-82187693 MsG0280011306.01.T01:intron 15.0%
!!! TTCCAAGTTTTATTTATAAT+TGG + Chr2:82186748-82186767 MsG0280011306.01.T01:intron 15.0%
!! AAAACAGAGAGAATTATTAA+TGG + Chr2:82183568-82183587 MsG0280011306.01.T01:five_prime_UTR 20.0%
!! AAAATTATATCACCAAAATC+AGG - Chr2:82188773-82188792 None:intergenic 20.0%
!! AAACAGAGAGAATTATTAAT+GGG + Chr2:82183569-82183588 MsG0280011306.01.T01:five_prime_UTR 20.0%
!! AAATTATATCACCAAAATCA+GGG - Chr2:82188772-82188791 None:intergenic 20.0%
!! AACTAATATATGACAGAATT+TGG - Chr2:82188279-82188298 None:intergenic 20.0%
!! AATTACTTTGATCTGTATTT+GGG + Chr2:82187020-82187039 MsG0280011306.01.T01:intron 20.0%
!! AATTCTGTCATATATTAGTT+TGG + Chr2:82188279-82188298 MsG0280011306.01.T01:intron 20.0%
!! ACAAAATAGTTTCATTATTC+TGG + Chr2:82185998-82186017 MsG0280011306.01.T01:intron 20.0%
!! ACACATAAAGAGATATAAAA+GGG - Chr2:82188116-82188135 None:intergenic 20.0%
!! ACTTATAGTAAAAAATATGG+TGG + Chr2:82184022-82184041 MsG0280011306.01.T01:intron 20.0%
!! ATAAATAGTTCAACACTTAT+CGG - Chr2:82185290-82185309 None:intergenic 20.0%
!! ATGATAGATAGAAAATTATG+TGG + Chr2:82184224-82184243 MsG0280011306.01.T01:intron 20.0%
!! GAAACTAATTAATGTTAACT+TGG + Chr2:82187397-82187416 MsG0280011306.01.T01:intron 20.0%
!! TAATTACTTTGATCTGTATT+TGG + Chr2:82187019-82187038 MsG0280011306.01.T01:intron 20.0%
!! TATAAGAGAAACTATTAAGA+AGG + Chr2:82184163-82184182 MsG0280011306.01.T01:intron 20.0%
!! TCAAAATTTATGTTTACTGA+AGG + Chr2:82188649-82188668 MsG0280011306.01.T01:intron 20.0%
!! TCTAATAGTTCAACATTTAT+CGG - Chr2:82185701-82185720 None:intergenic 20.0%
!! TTAAATTGAAAGGCTTATAA+AGG - Chr2:82187617-82187636 None:intergenic 20.0%
!! TTGTGAAAAGATTAAAACTT+TGG - Chr2:82183318-82183337 None:intergenic 20.0%
!! TTTAATAGCTATTAATCCTA+TGG - Chr2:82184815-82184834 None:intergenic 20.0%
!! TTTATCAATCTAGATAATTG+TGG + Chr2:82187215-82187234 MsG0280011306.01.T01:intron 20.0%
!! TTTCACATTGGATAAAATAA+TGG + Chr2:82186627-82186646 MsG0280011306.01.T01:intron 20.0%
!!! ATCAAAATTTTAAATTGCTG+CGG + Chr2:82184320-82184339 MsG0280011306.01.T01:intron 20.0%
!!! GAAATGAAACTGATTTAAAA+GGG - Chr2:82183251-82183270 None:intergenic 20.0%
!!! GAATTTAAAATTTGGTAACA+AGG - Chr2:82185085-82185104 None:intergenic 20.0%
!!! GATTTAAAACTTTGATAACA+AGG - Chr2:82185498-82185517 None:intergenic 20.0%
!!! TACATTTGTTATTATTACCA+TGG + Chr2:82184968-82184987 MsG0280011306.01.T01:intron 20.0%
!!! TCTCGTCTTTTTTTATTTAA+TGG + Chr2:82188589-82188608 MsG0280011306.01.T01:intron 20.0%
!!! TGAAATGAAACTGATTTAAA+AGG - Chr2:82183252-82183271 None:intergenic 20.0%
! AACCTGAAAGATATAACATA+TGG + Chr2:82186207-82186226 MsG0280011306.01.T01:CDS 25.0%
! AAGCAAATGATAAGACAAAT+CGG + Chr2:82188730-82188749 MsG0280011306.01.T01:CDS 25.0%
! AATAAATTGCCTTAGTAACT+TGG + Chr2:82185312-82185331 MsG0280011306.01.T01:intron 25.0%
! AATGAGCTCAAAATTTCTAT+TGG + Chr2:82187294-82187313 MsG0280011306.01.T01:CDS 25.0%
! ATAAAAAAATTGGTGCAAAG+CGG - Chr2:82188215-82188234 None:intergenic 25.0%
! ATAAACATTCCAAGTTACTA+AGG - Chr2:82185324-82185343 None:intergenic 25.0%
! ATAATTCCTAATCATCCTAA+CGG + Chr2:82184768-82184787 MsG0280011306.01.T01:intron 25.0%
! ATCGTTTCAAATAACAAGTA+GGG - Chr2:82185255-82185274 None:intergenic 25.0%
! ATGTTTGTATTAAAATGCCA+GGG + Chr2:82186044-82186063 MsG0280011306.01.T01:intron 25.0%
! ATTACTTTGATCTGTATTTG+GGG + Chr2:82187021-82187040 MsG0280011306.01.T01:intron 25.0%
! CACACATAAAGAGATATAAA+AGG - Chr2:82188117-82188136 None:intergenic 25.0%
! CCTAAAATGTTTATATGTTG+AGG + Chr2:82185739-82185758 MsG0280011306.01.T01:intron 25.0%
! CTCAAGTTAATAGAAAAAAC+AGG - Chr2:82186436-82186455 None:intergenic 25.0%
! GAAAGGAAGAAAAAAAATCA+TGG - Chr2:82186534-82186553 None:intergenic 25.0%
! GAAAGTGAGTAATAAGAAAA+GGG - Chr2:82183393-82183412 None:intergenic 25.0%
! GAATAACAGACAATTAACAT+TGG - Chr2:82186912-82186931 None:intergenic 25.0%
! GCAGATAATGTTTATATATG+TGG + Chr2:82187091-82187110 MsG0280011306.01.T01:intron 25.0%
! GTAACTTGGAATGTTTATAT+AGG + Chr2:82185326-82185345 MsG0280011306.01.T01:intron 25.0%
! TAAAAAATATGGTGGTAACT+AGG + Chr2:82184030-82184049 MsG0280011306.01.T01:intron 25.0%
! TAAACATTATCTGCATTTGA+AGG - Chr2:82187085-82187104 None:intergenic 25.0%
! TAGAAAAAACAGGAATTTCA+AGG - Chr2:82186426-82186445 None:intergenic 25.0%
! TAGTTTCATTATTCTGGATT+TGG + Chr2:82186004-82186023 MsG0280011306.01.T01:intron 25.0%
! TCACAAATTCTTCATATTCA+GGG - Chr2:82186070-82186089 None:intergenic 25.0%
! TGAAAGTGAGTAATAAGAAA+AGG - Chr2:82183394-82183413 None:intergenic 25.0%
! TGGAGTTAAGAAGTTAATTA+GGG - Chr2:82184871-82184890 None:intergenic 25.0%
! TTCTACATTATTTATTCCCA+TGG + Chr2:82183888-82183907 MsG0280011306.01.T01:intron 25.0%
! TTGGAGTTAAGAAGTTAATT+AGG - Chr2:82184872-82184891 None:intergenic 25.0%
!! CCTCAACATATAAACATTTT+AGG - Chr2:82185742-82185761 None:intergenic 25.0%
!! CTTCTATATCTTTTATGTGA+GGG + Chr2:82187922-82187941 MsG0280011306.01.T01:intron 25.0%
!! CTTTTATATCTCTTTATGTG+TGG + Chr2:82188115-82188134 MsG0280011306.01.T01:intron 25.0%
!! GAAATCTAGTTTGAAAGAAT+TGG + Chr2:82188856-82188875 MsG0280011306.01.T01:intron 25.0%
!! TCTTAATTGTTGTTGTTATG+CGG + Chr2:82185164-82185183 MsG0280011306.01.T01:intron 25.0%
!! TCTTCTATATCTTTTATGTG+AGG + Chr2:82187921-82187940 MsG0280011306.01.T01:intron 25.0%
!! TTCTATATCTTTTATGTGAG+GGG + Chr2:82187923-82187942 MsG0280011306.01.T01:intron 25.0%
!! TTTACCTTTCCTAATTTTTC+AGG + Chr2:82188677-82188696 MsG0280011306.01.T01:intron 25.0%
!!! GCTAATTCTTTGAAAGATTT+TGG + Chr2:82183670-82183689 MsG0280011306.01.T01:CDS 25.0%
!!! GTTATCAAAGTTTTAAATCG+TGG + Chr2:82185499-82185518 MsG0280011306.01.T01:intron 25.0%
!!! TTGTTCTGAAACTTAATTCA+AGG + Chr2:82187757-82187776 MsG0280011306.01.T01:intron 25.0%
!!! TTTTGGAAATTCTCTTGTTT+TGG + Chr2:82183687-82183706 MsG0280011306.01.T01:CDS 25.0%
!!! TTTTTCTATTAACTTGAGCT+GGG + Chr2:82186438-82186457 MsG0280011306.01.T01:intron 25.0%
!!! TTTTTTCTATTAACTTGAGC+TGG + Chr2:82186437-82186456 MsG0280011306.01.T01:intron 25.0%
AACAAGAGAATGATTCTAAC+TGG + Chr2:82184541-82184560 MsG0280011306.01.T01:intron 30.0%
AACTGTTAGGACTTAGAATA+AGG - Chr2:82184909-82184928 None:intergenic 30.0%
AATATCTTTCTCGTACTAAC+AGG + Chr2:82184615-82184634 MsG0280011306.01.T01:intron 30.0%
ACAAATCGGTAATTACTCAA+TGG + Chr2:82188744-82188763 MsG0280011306.01.T01:intron 30.0%
ACATTTCAAGAACATCAGTT+GGG + Chr2:82187571-82187590 MsG0280011306.01.T01:intron 30.0%
ACCTCAACATATAAACATTC+AGG - Chr2:82184458-82184477 None:intergenic 30.0%
ACTAGTAGTAATAGAAACCA+TGG - Chr2:82183908-82183927 None:intergenic 30.0%
AGGAAGAAAAAAAATCATGG+CGG - Chr2:82186531-82186550 None:intergenic 30.0%
AGTCATTCACCTGAAAAATT+AGG - Chr2:82188689-82188708 None:intergenic 30.0%
ATTCAAATCTGCTCAGTATT+GGG - Chr2:82184520-82184539 None:intergenic 30.0%
ATTGAAAGAGAAGATACACA+AGG + Chr2:82184653-82184672 MsG0280011306.01.T01:intron 30.0%
CACCATATGTTATATCTTTC+AGG - Chr2:82186212-82186231 None:intergenic 30.0%
CAGGGATGATATAGTTATAT+GGG + Chr2:82185778-82185797 MsG0280011306.01.T01:intron 30.0%
CATCGTTTCAAATAACAAGT+AGG - Chr2:82185256-82185275 None:intergenic 30.0%
CATGTTTGTATTAAAATGCC+AGG + Chr2:82186043-82186062 MsG0280011306.01.T01:intron 30.0%
CTAGTAGTAATAGAAACCAT+GGG - Chr2:82183907-82183926 None:intergenic 30.0%
CTCACAAATTCTTCATATTC+AGG - Chr2:82186071-82186090 None:intergenic 30.0%
GATATCTGGATAAAGAACTT+GGG - Chr2:82186150-82186169 None:intergenic 30.0%
GGATAATTGTAGTCAAAATG+TGG + Chr2:82185545-82185564 MsG0280011306.01.T01:intron 30.0%
GTAATAAGAAAAGGGTTAGA+AGG - Chr2:82183385-82183404 None:intergenic 30.0%
TAACAAAAAGCAGCAAAGTA+GGG - Chr2:82183771-82183790 None:intergenic 30.0%
TAACTAGGCTTAGATGATTT+GGG + Chr2:82184045-82184064 MsG0280011306.01.T01:intron 30.0%
TAATCCTATGGCCTATAAAT+AGG - Chr2:82184803-82184822 None:intergenic 30.0%
TAATTCCTAATCATCCTAAC+GGG + Chr2:82184769-82184788 MsG0280011306.01.T01:intron 30.0%
TAGTTATATGGGCAAGAAAA+AGG + Chr2:82185789-82185808 MsG0280011306.01.T01:CDS 30.0%
TATTACTACTAGTATGTGCT+TGG + Chr2:82183915-82183934 MsG0280011306.01.T01:intron 30.0%
TATTCAAATCTGCTCAGTAT+TGG - Chr2:82184521-82184540 None:intergenic 30.0%
TCATGCAGAAAAATGTCATA+CGG - Chr2:82187509-82187528 None:intergenic 30.0%
TCCTCAAATCTTGTTAACAT+GGG + Chr2:82183174-82183193 MsG0280011306.01.T01:five_prime_UTR 30.0%
TCTTTCGATATACCAAAAAC+AGG - Chr2:82184494-82184513 None:intergenic 30.0%
TGATATCTGGATAAAGAACT+TGG - Chr2:82186151-82186170 None:intergenic 30.0%
TGCTTTGTAAAGTAAAAGTG+TGG - Chr2:82188715-82188734 None:intergenic 30.0%
TGGTTATTCTTAAGCTAGAA+CGG - Chr2:82186892-82186911 None:intergenic 30.0%
TTAACAAAAAGCAGCAAAGT+AGG - Chr2:82183772-82183791 None:intergenic 30.0%
TTAATTGTCTGTTATTCCCT+AGG + Chr2:82186915-82186934 MsG0280011306.01.T01:intron 30.0%
TTCACCTGAAAAATTAGGAA+AGG - Chr2:82188684-82188703 None:intergenic 30.0%
TTGAAGGAAAAATTTAGACC+AGG - Chr2:82187069-82187088 None:intergenic 30.0%
TTTGGAGAAAAACAAGTGAA+AGG - Chr2:82186551-82186570 None:intergenic 30.0%
! AAGTATCACACTTTTCTCAT+TGG + Chr2:82185869-82185888 MsG0280011306.01.T01:CDS 30.0%
! AGAAATTTTGAACAGCAAGA+AGG + Chr2:82187867-82187886 MsG0280011306.01.T01:CDS 30.0%
! ATAACACTTACTTGCAGTTT+TGG - Chr2:82188556-82188575 None:intergenic 30.0%
! ATGATCACGCCTAAATTTTA+GGG - Chr2:82183201-82183220 None:intergenic 30.0%
! ATTAATTAGTTTCCTTCAGC+AGG - Chr2:82187390-82187409 None:intergenic 30.0%
! CGCGACAAGAATTTAAAATT+TGG - Chr2:82185093-82185112 None:intergenic 30.0%
! CTAGTGTTCAAGTTATTGTT+GGG + Chr2:82187830-82187849 MsG0280011306.01.T01:CDS 30.0%
! GCTTTGTAAAGTAAAAGTGT+GGG - Chr2:82188714-82188733 None:intergenic 30.0%
! GGTGTCATACTTATTTAAGA+GGG + Chr2:82188136-82188155 MsG0280011306.01.T01:intron 30.0%
! GTTTCTCTTATAGTTTGTCT+TGG - Chr2:82184155-82184174 None:intergenic 30.0%
! TATGAGTTTGTTCTTGTTCT+TGG + Chr2:82183592-82183611 MsG0280011306.01.T01:five_prime_UTR 30.0%
! TATGATCACGCCTAAATTTT+AGG - Chr2:82183202-82183221 None:intergenic 30.0%
! TATTTGAAACGATGAACTCA+AGG + Chr2:82185262-82185281 MsG0280011306.01.T01:intron 30.0%
! TGTCATATATTAGTTTGGAG+TGG + Chr2:82188284-82188303 MsG0280011306.01.T01:intron 30.0%
!! ATATGTTGAGGTGTTTTGTA+AGG + Chr2:82184466-82184485 MsG0280011306.01.T01:intron 30.0%
!! GTATTCTAGAGACTTGTTAA+TGG + Chr2:82185036-82185055 MsG0280011306.01.T01:intron 30.0%
!! TGGTGTCATACTTATTTAAG+AGG + Chr2:82188135-82188154 MsG0280011306.01.T01:intron 30.0%
!!! AAATTCTCTTGTTTTGGCTA+AGG + Chr2:82183693-82183712 MsG0280011306.01.T01:CDS 30.0%
!!! ACTTTGCTGCTTTTTGTTAA+TGG + Chr2:82183772-82183791 MsG0280011306.01.T01:CDS 30.0%
!!! CTTTGCTGCTTTTTGTTAAT+GGG + Chr2:82183773-82183792 MsG0280011306.01.T01:CDS 30.0%
!!! GAAATTGATGGATTTTGACA+TGG - Chr2:82183363-82183382 None:intergenic 30.0%
!!! GCTTTGCACCAATTTTTTTA+TGG + Chr2:82188214-82188233 MsG0280011306.01.T01:intron 30.0%
AACATGGGACCCTAAAATTT+AGG + Chr2:82183189-82183208 MsG0280011306.01.T01:five_prime_UTR 35.0%
AACGAACTGGGTTTCATTAT+CGG - Chr2:82186105-82186124 None:intergenic 35.0%
AAGCAGATAAGCAATATGAC+AGG - Chr2:82188360-82188379 None:intergenic 35.0%
AAGGATCGAGATTAATGAGT+TGG + Chr2:82184182-82184201 MsG0280011306.01.T01:intron 35.0%
AAGGGTTAGAAGGAAATTGA+TGG - Chr2:82183375-82183394 None:intergenic 35.0%
AATTCAGGACATAAACATCG+AGG - Chr2:82185208-82185227 None:intergenic 35.0%
ACAAGTAGGGTTTCAAAACA+AGG - Chr2:82185242-82185261 None:intergenic 35.0%
ACATTGTGTCTTTGATACTG+TGG + Chr2:82185524-82185543 MsG0280011306.01.T01:intron 35.0%
ACTAGAACGAATTGAGCATA+TGG - Chr2:82186255-82186274 None:intergenic 35.0%
ACTTCAATATTGCTTCGTGT+TGG - Chr2:82187328-82187347 None:intergenic 35.0%
AGCAGATAAGCAATATGACA+GGG - Chr2:82188359-82188378 None:intergenic 35.0%
AGGTCATGGCAAAACTTTAT+TGG + Chr2:82186589-82186608 MsG0280011306.01.T01:intron 35.0%
AGTTATGAGAGTAGATCAGA+TGG + Chr2:82184097-82184116 MsG0280011306.01.T01:intron 35.0%
ATACTTATTTAAGAGGGAGG+AGG + Chr2:82188142-82188161 MsG0280011306.01.T01:intron 35.0%
ATCAAATGCAGCTACCTATT+TGG - Chr2:82187269-82187288 None:intergenic 35.0%
ATGAACAATCCTTTGTGCTT+TGG - Chr2:82183534-82183553 None:intergenic 35.0%
CAACAAACACGTTAAAGTCA+AGG + Chr2:82188889-82188908 MsG0280011306.01.T01:CDS 35.0%
CATCTCATAATGTATTCGAG+AGG + Chr2:82185922-82185941 MsG0280011306.01.T01:intron 35.0%
CCAGGGATGATATAGTTATA+TGG + Chr2:82185777-82185796 MsG0280011306.01.T01:intron 35.0%
CCATATAACTATATCATCCC+TGG - Chr2:82185780-82185799 None:intergenic 35.0%
CGTGAATCATTACGTAAAAC+AGG + Chr2:82188408-82188427 MsG0280011306.01.T01:intron 35.0%
CGTTGTGATTCTTAATAGTG+TGG + Chr2:82185111-82185130 MsG0280011306.01.T01:intron 35.0%
CTCCTCAAATCTTGTTAACA+TGG + Chr2:82183173-82183192 MsG0280011306.01.T01:five_prime_UTR 35.0%
GAAATGTCGAACACTATAGT+AGG - Chr2:82187558-82187577 None:intergenic 35.0%
GACATTTCAAGAACATCAGT+TGG + Chr2:82187570-82187589 MsG0280011306.01.T01:intron 35.0%
GAGAGTAATCAAATCAGTAG+AGG + Chr2:82184119-82184138 MsG0280011306.01.T01:intron 35.0%
GATGTTTATGTCCTGAATTG+TGG + Chr2:82185209-82185228 MsG0280011306.01.T01:intron 35.0%
GCATGTAAAGAGAAGAACTA+TGG + Chr2:82184067-82184086 MsG0280011306.01.T01:intron 35.0%
GCCTGAATGTTTATATGTTG+AGG + Chr2:82184454-82184473 MsG0280011306.01.T01:intron 35.0%
GGAAGAAAAAAAATCATGGC+GGG - Chr2:82186530-82186549 None:intergenic 35.0%
GTAACTAGGCTTAGATGATT+TGG + Chr2:82184044-82184063 MsG0280011306.01.T01:intron 35.0%
GTAGTAGAAACTAGAAACCA+TGG - Chr2:82184988-82185007 None:intergenic 35.0%
GTCATACTTATTTAAGAGGG+AGG + Chr2:82188139-82188158 MsG0280011306.01.T01:intron 35.0%
GTTCTCACATTATCAGGTAT+TGG - Chr2:82187487-82187506 None:intergenic 35.0%
TAAAACAGGTATTCACACCT+TGG + Chr2:82188422-82188441 MsG0280011306.01.T01:intron 35.0%
TACTTATTTAAGAGGGAGGA+GGG + Chr2:82188143-82188162 MsG0280011306.01.T01:intron 35.0%
TAGAATAAGGAGAGTTTGTC+AGG - Chr2:82184896-82184915 None:intergenic 35.0%
TAGACCAGGAAATTGCATAA+CGG - Chr2:82187055-82187074 None:intergenic 35.0%
TAGGATGAGAAATGACTAGT+TGG + Chr2:82183993-82184012 MsG0280011306.01.T01:intron 35.0%
TAGGTAGCTGCATTTGATAA+TGG + Chr2:82187271-82187290 MsG0280011306.01.T01:intron 35.0%
TAGTCCTATTTATAGGCCAT+AGG + Chr2:82184796-82184815 MsG0280011306.01.T01:intron 35.0%
TCCCATGTTAACAAGATTTG+AGG - Chr2:82183178-82183197 None:intergenic 35.0%
TCTGTACTTATCCGAATAAC+AGG - Chr2:82185824-82185843 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + Chr2:82188018-82188037 MsG0280011306.01.T01:intron 35.0%
TGGACGCTTTGATAAATTTG+AGG + Chr2:82185889-82185908 MsG0280011306.01.T01:CDS 35.0%
TTCGCAAAGACAAAAACCTA+GGG - Chr2:82186934-82186953 None:intergenic 35.0%
! AACTTTATTGGCTATGCAGA+TGG + Chr2:82186601-82186620 MsG0280011306.01.T01:intron 35.0%
! AAGCCTACTGGTAATTTTCT+CGG + Chr2:82186170-82186189 MsG0280011306.01.T01:CDS 35.0%
! ACTAAAGCTGCTTCTTTTCT+TGG + Chr2:82183733-82183752 MsG0280011306.01.T01:CDS 35.0%
! AGGATGAGAAATGACTAGTT+GGG + Chr2:82183994-82184013 MsG0280011306.01.T01:intron 35.0%
! ATCATTTGGGATAACAGGTA+GGG - Chr2:82185666-82185685 None:intergenic 35.0%
! ATGATTTTCCTATGCATCCA+AGG + Chr2:82187525-82187544 MsG0280011306.01.T01:intron 35.0%
! ATGTTAACTTGGAATTCTGC+AGG + Chr2:82187408-82187427 MsG0280011306.01.T01:intron 35.0%
! CGAGATTAATGAGTTGGATA+TGG + Chr2:82184188-82184207 MsG0280011306.01.T01:intron 35.0%
! CTAAAGCTGCTTCTTTTCTT+GGG + Chr2:82183734-82183753 MsG0280011306.01.T01:CDS 35.0%
! GACTTTAACGTGTTTGTTGA+TGG - Chr2:82188888-82188907 None:intergenic 35.0%
! GCTAGTGTTCAAGTTATTGT+TGG + Chr2:82187829-82187848 MsG0280011306.01.T01:CDS 35.0%
! GCTTCTTTTCTTGGGATTAA+AGG + Chr2:82183742-82183761 MsG0280011306.01.T01:CDS 35.0%
! TATTTCTTGGTGTGCCAAAT+AGG + Chr2:82187252-82187271 MsG0280011306.01.T01:intron 35.0%
! TGAGTTGGATATGGATAGAT+AGG + Chr2:82184197-82184216 MsG0280011306.01.T01:intron 35.0%
! TTATTCTGGATTTGGTACTG+TGG + Chr2:82186012-82186031 MsG0280011306.01.T01:intron 35.0%
! TTCTAGAGACATCAAAAACC+TGG + Chr2:82185600-82185619 MsG0280011306.01.T01:intron 35.0%
! TTTTGCAGTAAACTTGTGCA+AGG + Chr2:82187433-82187452 MsG0280011306.01.T01:CDS 35.0%
! TTTTGTAAGGAGCCTGTTTT+TGG + Chr2:82184479-82184498 MsG0280011306.01.T01:intron 35.0%
!! AGGTTTTAACCAAAGCACAA+AGG + Chr2:82183522-82183541 MsG0280011306.01.T01:five_prime_UTR 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - Chr2:82188019-82188038 None:intergenic 35.0%
AACGTTTCGTTATAGAAGCG+AGG - Chr2:82188810-82188829 None:intergenic 40.0%
AACTAGAGAATGCTCTAGTG+AGG - Chr2:82184733-82184752 None:intergenic 40.0%
AAGCAAGCAAGTAGAGAAGT+TGG + Chr2:82188465-82188484 MsG0280011306.01.T01:CDS 40.0%
AAGTCCAAACATTGTCAGGA+AGG - Chr2:82187144-82187163 None:intergenic 40.0%
AATCAAATCAGTAGAGGCAG+AGG + Chr2:82184125-82184144 MsG0280011306.01.T01:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + Chr2:82188012-82188031 MsG0280011306.01.T01:CDS 40.0%
ACTAGAGAATGCTCTAGTGA+GGG - Chr2:82184732-82184751 None:intergenic 40.0%
ACTTATTTAAGAGGGAGGAG+GGG + Chr2:82188144-82188163 MsG0280011306.01.T01:intron 40.0%
ACTTCTCAACCTTATTCTGG+CGG + Chr2:82183796-82183815 MsG0280011306.01.T01:CDS 40.0%
AGAGATATAAAAGGGCAACC+CGG - Chr2:82188108-82188127 None:intergenic 40.0%
AGTCCAAACATTGTCAGGAA+GGG - Chr2:82187143-82187162 None:intergenic 40.0%
ATATGGGCAAGAAAAAGGAC+CGG + Chr2:82185794-82185813 MsG0280011306.01.T01:CDS 40.0%
ATCCCGAGAAAATTACCAGT+AGG - Chr2:82186176-82186195 None:intergenic 40.0%
ATGGTGAGATTGAGATCTGA+TGG - Chr2:82183344-82183363 None:intergenic 40.0%
ATGTAGTTGACCCAACTTAG+TGG + Chr2:82184257-82184276 MsG0280011306.01.T01:intron 40.0%
CAACATTTATCAGTGCCTTG+AGG - Chr2:82184414-82184433 None:intergenic 40.0%
CAACATTTATCGGTGCATTG+AGG - Chr2:82185691-82185710 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + Chr2:82188013-82188032 MsG0280011306.01.T01:CDS 40.0%
CATACGGTTCTCACATTATC+AGG - Chr2:82187493-82187512 None:intergenic 40.0%
CGATGAATTAGAGCGAGAAA+AGG + Chr2:82183470-82183489 MsG0280011306.01.T01:five_prime_UTR 40.0%
CGTACAATACACCAAATGGT+GGG + Chr2:82188044-82188063 MsG0280011306.01.T01:intron 40.0%
CTAACAGGTGAATGGGAAAT+AGG + Chr2:82184630-82184649 MsG0280011306.01.T01:intron 40.0%
CTTACTCACTTCAACGAACT+GGG - Chr2:82186117-82186136 None:intergenic 40.0%
CTTCAAGTCCAAACATTGTC+AGG - Chr2:82187148-82187167 None:intergenic 40.0%
GAAACCGTTATGCAATTTCC+TGG + Chr2:82187048-82187067 MsG0280011306.01.T01:intron 40.0%
GACATGAGGTTCACATGATT+GGG + Chr2:82185954-82185973 MsG0280011306.01.T01:intron 40.0%
GGAGAATTGCAGTCAAAATG+TGG + Chr2:82185132-82185151 MsG0280011306.01.T01:intron 40.0%
GGTGCATCATAGAAACTGTT+AGG - Chr2:82184922-82184941 None:intergenic 40.0%
GTGCATTGAGGTCATCATTT+GGG - Chr2:82185679-82185698 None:intergenic 40.0%
GTTCGCAAAGACAAAAACCT+AGG - Chr2:82186935-82186954 None:intergenic 40.0%
GTTGTTGTCATGTGACCATA+AGG + Chr2:82187968-82187987 MsG0280011306.01.T01:intron 40.0%
TAAGGAGAGTTTGTCAGGAT+TGG - Chr2:82184891-82184910 None:intergenic 40.0%
TATCCAGATATCAAGCCTAC+TGG + Chr2:82186158-82186177 MsG0280011306.01.T01:CDS 40.0%
TATGTCCTGAATTGTGGTTG+CGG + Chr2:82185215-82185234 MsG0280011306.01.T01:intron 40.0%
TCAGTGAGTTGTGTGACTAA+TGG - Chr2:82186675-82186694 None:intergenic 40.0%
TCTCGTACTAACAGGTGAAT+GGG + Chr2:82184623-82184642 MsG0280011306.01.T01:intron 40.0%
TGGTGAGATTGAGATCTGAT+GGG - Chr2:82183343-82183362 None:intergenic 40.0%
TGTAGTTGACCCAACTTAGT+GGG + Chr2:82184258-82184277 MsG0280011306.01.T01:intron 40.0%
TTACCAGTAGGCTTGATATC+TGG - Chr2:82186164-82186183 None:intergenic 40.0%
TTAGCAGCTTCAGCAAAATG+AGG - Chr2:82183655-82183674 None:intergenic 40.0%
TTCTCGTACTAACAGGTGAA+TGG + Chr2:82184622-82184641 MsG0280011306.01.T01:intron 40.0%
TTCTGCTACTAGTATGTGCT+TGG + Chr2:82185415-82185434 MsG0280011306.01.T01:intron 40.0%
TTCTTGAATTGTGGACCTCA+AGG + Chr2:82184396-82184415 MsG0280011306.01.T01:intron 40.0%
TTGCTTATCTGCTTATGCCT+TGG + Chr2:82188366-82188385 MsG0280011306.01.T01:intron 40.0%
TTGTTCTTGGTTATGCACCT+TGG + Chr2:82183605-82183624 MsG0280011306.01.T01:five_prime_UTR 40.0%
TTTGAACAGCAAGAAGGATG+TGG + Chr2:82187873-82187892 MsG0280011306.01.T01:CDS 40.0%
! AAGCCTTATCCCACTAAGTT+GGG - Chr2:82184270-82184289 None:intergenic 40.0%
! ACTAAGTTGGGTCAACTACA+TGG - Chr2:82184258-82184277 None:intergenic 40.0%
! AGCAAGAACTTTCAAGTCGA+AGG + Chr2:82186996-82187015 MsG0280011306.01.T01:CDS 40.0%
! AGCCTACTGGTAATTTTCTC+GGG + Chr2:82186171-82186190 MsG0280011306.01.T01:CDS 40.0%
! AGGTCATCATTTGGGATAAC+AGG - Chr2:82185671-82185690 None:intergenic 40.0%
! CATCATTTGGGATAACAGGT+AGG - Chr2:82185667-82185686 None:intergenic 40.0%
! GGATGAGAAATGACTAGTTG+GGG + Chr2:82183995-82184014 MsG0280011306.01.T01:intron 40.0%
! GGGAGGTTAGTCCTATTTAT+AGG + Chr2:82184789-82184808 MsG0280011306.01.T01:intron 40.0%
! GTTCTTGCTACTTCTTGAAG+TGG - Chr2:82186985-82187004 None:intergenic 40.0%
! TATCAACAGCAAAGCATCCA+GGG - Chr2:82186840-82186859 None:intergenic 40.0%
! TGATGTCGCTTCTTGAATTG+TGG + Chr2:82184387-82184406 MsG0280011306.01.T01:intron 40.0%
! TTATCAACAGCAAAGCATCC+AGG - Chr2:82186841-82186860 None:intergenic 40.0%
! TTTTATGTGAGGGGTAACCT+TGG + Chr2:82187932-82187951 MsG0280011306.01.T01:intron 40.0%
!! ACACACTTTTTATGCGTCCA+AGG + Chr2:82185359-82185378 MsG0280011306.01.T01:intron 40.0%
!! AGGAGTTTTGTGATTGTTCC+AGG + Chr2:82185759-82185778 MsG0280011306.01.T01:intron 40.0%
!! ATGGCGGGCATAAACAAATT+TGG - Chr2:82186515-82186534 None:intergenic 40.0%
!! GGAGTTTTGTGATTGTTCCA+GGG + Chr2:82185760-82185779 MsG0280011306.01.T01:intron 40.0%
!! TACTAGTATGTGCTTGGTGT+TGG + Chr2:82183921-82183940 MsG0280011306.01.T01:intron 40.0%
!!! CAAGAAGGATGTGGTTTTAG+AGG + Chr2:82187882-82187901 MsG0280011306.01.T01:CDS 40.0%
!!! CCTTGGTTGATTTTAACTCG+CGG + Chr2:82188383-82188402 MsG0280011306.01.T01:intron 40.0%
!!! TTCTCTTGTTTTGGCTAAGG+TGG + Chr2:82183696-82183715 MsG0280011306.01.T01:CDS 40.0%
AACCTCCCGTTAGGATGATT+AGG - Chr2:82184777-82184796 None:intergenic 45.0%
AAGCCCTTCCTGACAATGTT+TGG + Chr2:82187137-82187156 MsG0280011306.01.T01:CDS 45.0%
AAGTACAGAGAAAGCAGCAG+AGG + Chr2:82185835-82185854 MsG0280011306.01.T01:CDS 45.0%
AATAGGACTAACCTCCCGTT+AGG - Chr2:82184786-82184805 None:intergenic 45.0%
AGAAGACAACCTTGCACTCA+AGG + Chr2:82184686-82184705 MsG0280011306.01.T01:intron 45.0%
AGTATGTGTGTGCTCAGTGT+TGG + Chr2:82185009-82185028 MsG0280011306.01.T01:intron 45.0%
ATAGTGACCTGATGCTTGAC+TGG - Chr2:82186725-82186744 None:intergenic 45.0%
ATGTGAACCTCATGTCGACA+TGG - Chr2:82185950-82185969 None:intergenic 45.0%
ATTCTTCATATTCAGGGCCC+TGG - Chr2:82186064-82186083 None:intergenic 45.0%
CAACTTAGTGGGATAAGGCT+TGG + Chr2:82184269-82184288 MsG0280011306.01.T01:intron 45.0%
CCAGTTCGTTGAAGTGAGTA+AGG + Chr2:82186115-82186134 MsG0280011306.01.T01:CDS 45.0%
CCGCGAGTTAAAATCAACCA+AGG - Chr2:82188386-82188405 None:intergenic 45.0%
CCTTACTCACTTCAACGAAC+TGG - Chr2:82186118-82186137 None:intergenic 45.0%
CGACATGAGGTTCACATGAT+TGG + Chr2:82185953-82185972 MsG0280011306.01.T01:intron 45.0%
CTAGAGAATGCTCTAGTGAG+GGG - Chr2:82184731-82184750 None:intergenic 45.0%
CTATAGTAGGACAGACACCT+TGG - Chr2:82187545-82187564 None:intergenic 45.0%
CTTATTTAAGAGGGAGGAGG+GGG + Chr2:82188145-82188164 MsG0280011306.01.T01:intron 45.0%
GAGCGAGAAAAGGATCATGA+TGG + Chr2:82183480-82183499 MsG0280011306.01.T01:five_prime_UTR 45.0%
GCGTACAATACACCAAATGG+TGG + Chr2:82188043-82188062 MsG0280011306.01.T01:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + Chr2:82188040-82188059 MsG0280011306.01.T01:intron 45.0%
GGGACTTCTCAACCTTATTC+TGG + Chr2:82183793-82183812 MsG0280011306.01.T01:CDS 45.0%
GGTGAGATTGAGATCTGATG+GGG - Chr2:82183342-82183361 None:intergenic 45.0%
GGTGCATTGAGGTCATCATT+TGG - Chr2:82185680-82185699 None:intergenic 45.0%
GTCATGTGACCATAAGGTCA+CGG + Chr2:82187974-82187993 MsG0280011306.01.T01:intron 45.0%
GTTCACATGATTGGGAGTTG+TGG + Chr2:82185962-82185981 MsG0280011306.01.T01:intron 45.0%
TATCCGAATAACAGGCGTAC+CGG - Chr2:82185816-82185835 None:intergenic 45.0%
TATGATGCACCTTGATGTCG+AGG + Chr2:82184931-82184950 MsG0280011306.01.T01:intron 45.0%
TCAGCACTTCTTGAACACCA+AGG - Chr2:82183625-82183644 None:intergenic 45.0%
TCATGTGACCATAAGGTCAC+GGG + Chr2:82187975-82187994 MsG0280011306.01.T01:intron 45.0%
TCCTCACAGTTGAAACACCA+AGG - Chr2:82188442-82188461 None:intergenic 45.0%
TGACCCAACTTAGTGGGATA+AGG + Chr2:82184264-82184283 MsG0280011306.01.T01:intron 45.0%
TGCAACCTTAATCCTTGTCG+CGG + Chr2:82185572-82185591 MsG0280011306.01.T01:intron 45.0%
TGCAGATGGAGCTTTCACAT+TGG + Chr2:82186615-82186634 MsG0280011306.01.T01:intron 45.0%
TTCCTAATCATCCTAACGGG+AGG + Chr2:82184772-82184791 MsG0280011306.01.T01:intron 45.0%
TTTGCCATGACCTCAGTACT+TGG - Chr2:82186582-82186601 None:intergenic 45.0%
! AACATCGACACCAAGTACTG+AGG + Chr2:82186569-82186588 MsG0280011306.01.T01:intron 45.0%
! ACTAGCTTCAGTCTGCAAGT+TGG - Chr2:82187815-82187834 None:intergenic 45.0%
! ACTCAATGGCACCCTGATTT+TGG + Chr2:82188758-82188777 MsG0280011306.01.T01:intron 45.0%
! ATCAACAGCAAAGCATCCAG+GGG - Chr2:82186839-82186858 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+TGG - Chr2:82184271-82184290 None:intergenic 45.0%
! GGACACATGTGTCATTGCTT+GGG - Chr2:82188258-82188277 None:intergenic 45.0%
! TGGACACATGTGTCATTGCT+TGG - Chr2:82188259-82188278 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr2:82188008-82188027 None:intergenic 45.0%
!! ACCTTGGTGTTTCAACTGTG+AGG + Chr2:82188438-82188457 MsG0280011306.01.T01:CDS 45.0%
!! CAGTACTTGGTGTCGATGTT+TGG - Chr2:82186569-82186588 None:intergenic 45.0%
!! GTACAACTGAAAGCACTCCT+TGG - Chr2:82185379-82185398 None:intergenic 45.0%
!! GTGTGAAATCTCTGAAGCAG+AGG + Chr2:82183502-82183521 MsG0280011306.01.T01:five_prime_UTR 45.0%
!! TTTGGTTTGCTTGACGCGAT+AGG + Chr2:82183974-82183993 MsG0280011306.01.T01:intron 45.0%
!! TTTTGAGTGTCACCTGCTGA+AGG + Chr2:82187375-82187394 MsG0280011306.01.T01:intron 45.0%
!!! CTTGTTTTGGCTAAGGTGGA+TGG + Chr2:82183700-82183719 MsG0280011306.01.T01:CDS 45.0%
!!! TTTATTTTTATTAGAATTTT+TGG + Chr2:82183956-82183975 MsG0280011306.01.T01:intron 5.0%
AAAAACCTGGATGTCCACCC+TGG + Chr2:82185613-82185632 MsG0280011306.01.T01:intron 50.0%
AACGTCTGCAACCATGAACC+AGG - Chr2:82185634-82185653 None:intergenic 50.0%
AAGGTCCGCAACCACAATTC+AGG - Chr2:82185223-82185242 None:intergenic 50.0%
ACGTCTGCAACCATGAACCA+GGG - Chr2:82185633-82185652 None:intergenic 50.0%
ACTCAAGCCAGTCAAGCATC+AGG + Chr2:82186715-82186734 MsG0280011306.01.T01:intron 50.0%
ACTGAAGCTCCGCATATGCA+GGG - Chr2:82188082-82188101 None:intergenic 50.0%
ATCCAGGGGCAATCAACATG+TGG - Chr2:82186825-82186844 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr2:82187952-82187971 None:intergenic 50.0%
GACAGACACCTTGGATGCAT+AGG - Chr2:82187536-82187555 None:intergenic 50.0%
GACTTGAACCCGTGACCTTA+TGG - Chr2:82187986-82188005 None:intergenic 50.0%
GCAGTGAAACCGCCAGAATA+AGG - Chr2:82183808-82183827 None:intergenic 50.0%
TGGCTAAGGTGGATGGTGAT+AGG + Chr2:82183707-82183726 MsG0280011306.01.T01:CDS 50.0%
TTGCACTCAAGGCTACCTCA+AGG + Chr2:82184697-82184716 MsG0280011306.01.T01:intron 50.0%
TTGTCAGGAAGGGCTTTGCA+AGG - Chr2:82187133-82187152 None:intergenic 50.0%
! TTGAGGTAGCCTTGAGTGCA+AGG - Chr2:82184698-82184717 None:intergenic 50.0%
!! AGAGGTACCATGTCGACATG+AGG + Chr2:82185940-82185959 MsG0280011306.01.T01:intron 50.0%
!! GAAAGCACTCCTCGACATCA+AGG - Chr2:82184943-82184962 None:intergenic 50.0%
!! GACACCAAGTACTGAGGTCA+TGG + Chr2:82186575-82186594 MsG0280011306.01.T01:intron 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr2:82187987-82188006 MsG0280011306.01.T01:intron 55.0%
ATGAACCAGGGTGGACATCC+AGG - Chr2:82185621-82185640 None:intergenic 55.0%
CACTGAAGCTCCGCATATGC+AGG - Chr2:82188083-82188102 None:intergenic 55.0%
CCACACCGCGACAAGGATTA+AGG - Chr2:82185580-82185599 None:intergenic 55.0%
CCTTAATCCTTGTCGCGGTG+TGG + Chr2:82185577-82185596 MsG0280011306.01.T01:intron 55.0%
GGACCGGTACGCCTGTTATT+CGG + Chr2:82185810-82185829 MsG0280011306.01.T01:CDS 55.0%
TATGCGGAGCTTCAGTGCAC+CGG + Chr2:82188086-82188105 MsG0280011306.01.T01:intron 55.0%
TCTGCAACCATGAACCAGGG+TGG - Chr2:82185630-82185649 None:intergenic 55.0%
TGGATGTCCACCCTGGTTCA+TGG + Chr2:82185620-82185639 MsG0280011306.01.T01:intron 55.0%
! TCTAGAACCACACCGCGACA+AGG - Chr2:82185587-82185606 None:intergenic 55.0%
! TGCCACATGTTGATTGCCCC+TGG + Chr2:82186820-82186839 MsG0280011306.01.T01:CDS 55.0%
AGCTCCGCATATGCAGGGTC+CGG - Chr2:82188077-82188096 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + Chr2:82187941-82187960 MsG0280011306.01.T01:intron 60.0%
ATGCGGAGCTTCAGTGCACC+GGG + Chr2:82188087-82188106 MsG0280011306.01.T01:intron 60.0%
CTTCCCGGACCCTGCATATG+CGG + Chr2:82188070-82188089 MsG0280011306.01.T01:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG - Chr2:82188071-82188090 None:intergenic 60.0%
! CCAAATGGTGGGACCCTTCC+CGG + Chr2:82188055-82188074 MsG0280011306.01.T01:intron 60.0%
!! TGAGGGGAGAGTGCTCCTTG+AGG - Chr2:82184715-82184734 None:intergenic 60.0%
CCGGGAAGGGTCCCACCATT+TGG - Chr2:82188058-82188077 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - Chr2:82188072-82188091 None:intergenic 65.0%
GCTCCGCATATGCAGGGTCC+GGG - Chr2:82188076-82188095 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 82183170 82188937 82183170 ID=MsG0280011306.01;Name=MsG0280011306.01
Chr2 mRNA 82183170 82188937 82183170 ID=MsG0280011306.01.T01;Parent=MsG0280011306.01;Name=MsG0280011306.01.T01;_AED=0.42;_eAED=0.43;_QI=479|0.58|0.76|0.84|1|1|13|0|411
Chr2 exon 82183170 82183827 82183170 ID=MsG0280011306.01.T01:exon:12298;Parent=MsG0280011306.01.T01
Chr2 exon 82185781 82185910 82185781 ID=MsG0280011306.01.T01:exon:12299;Parent=MsG0280011306.01.T01
Chr2 exon 82186065 82186228 82186065 ID=MsG0280011306.01.T01:exon:12300;Parent=MsG0280011306.01.T01
Chr2 exon 82186789 82186852 82186789 ID=MsG0280011306.01.T01:exon:12301;Parent=MsG0280011306.01.T01
Chr2 exon 82186937 82187017 82186937 ID=MsG0280011306.01.T01:exon:12302;Parent=MsG0280011306.01.T01
Chr2 exon 82187095 82187184 82187095 ID=MsG0280011306.01.T01:exon:12303;Parent=MsG0280011306.01.T01
Chr2 exon 82187274 82187345 82187274 ID=MsG0280011306.01.T01:exon:12304;Parent=MsG0280011306.01.T01
Chr2 exon 82187430 82187498 82187430 ID=MsG0280011306.01.T01:exon:12305;Parent=MsG0280011306.01.T01
Chr2 exon 82187823 82187903 82187823 ID=MsG0280011306.01.T01:exon:12306;Parent=MsG0280011306.01.T01
Chr2 exon 82187990 82188034 82187990 ID=MsG0280011306.01.T01:exon:12307;Parent=MsG0280011306.01.T01
Chr2 exon 82188430 82188564 82188430 ID=MsG0280011306.01.T01:exon:12308;Parent=MsG0280011306.01.T01
Chr2 exon 82188699 82188751 82188699 ID=MsG0280011306.01.T01:exon:12309;Parent=MsG0280011306.01.T01
Chr2 exon 82188865 82188937 82188865 ID=MsG0280011306.01.T01:exon:12310;Parent=MsG0280011306.01.T01
Chr2 five_prime_UTR 82183170 82183648 82183170 ID=MsG0280011306.01.T01:five_prime_utr;Parent=MsG0280011306.01.T01
Chr2 CDS 82183649 82183827 82183649 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82185781 82185910 82185781 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82186065 82186228 82186065 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82186789 82186852 82186789 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82186937 82187017 82186937 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82187095 82187184 82187095 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82187274 82187345 82187274 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82187430 82187498 82187430 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82187823 82187903 82187823 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82187990 82188034 82187990 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82188430 82188564 82188430 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82188699 82188751 82188699 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Chr2 CDS 82188865 82188937 82188865 ID=MsG0280011306.01.T01:cds;Parent=MsG0280011306.01.T01
Gene Sequence

>MsG0280011306.01.T01

ATGCCTCATTTTGCTGAAGCTGCTAATTCTTTGAAAGATTTTGGAAATTCTCTTGTTTTGGCTAAGGTGGATGGTGATAGGTTTACTAAAGCTGCTTCTTTTCTTGGGATTAAAGGCTACCCTACTTTGCTGCTTTTTGTTAATGGGACTTCTCAACCTTATTCTGGCGGTTTCACTGCGGATGATATAGTTATATGGGCAAGAAAAAGGACCGGTACGCCTGTTATTCGGATAAGTACAGAGAAAGCAGCAGAGGAATTTCTGAAAAAGTATCACACTTTTCTCATTGGACGCTTTGATAAATTTGAGGGCCCTGAATATGAAGAATTTGTGAGTGCTGCAAAGTCCGATAATGAAACCCAGTTCGTTGAAGTGAGTAAGGTAGAGCTTGCCCAAGTTCTTTATCCAGATATCAAGCCTACTGGTAATTTTCTCGGGATCGTTAAGAGCGAACCTGAAAGATATAACATATGTTCTGTTCATATTCTGTCTCTTGCGTGTTTTTGCCACATGTTGATTGCCCCTGGATGCTTTGCTGTTTTTGTCTTTGCGAACATTGATGACTTCAAGAATCTTCTTGATCCACTTCAAGAAGTAGCAAGAACTTTCAAGTCGAAGATAATGTTTATATATGTGGATATTAACGACGAGAACCTTGCAAAGCCCTTCCTGACAATGTTTGGACTTGAAGAATCAACAAATACTGTGGTAGCTGCATTTGATAATGGAATGAGCTCAAAATTTCTATTGGAGTCAAAACCAACACGAAGCAATATTGAAGAGTTTTGCAGTAAACTTGTGCAAGGTTCTTTGTTGACTTACTTCAAGTCGCAGCCAATACCTGATAATACTGAAGCTAGTGTTCAAGTTATTGTTGGGAAAACATTTGATGAAGAAATTTTGAACAGCAAGAAGGATGTGGTTTTAGAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAACAGGGTATTCACACCTTGGTGTTTCAACTGTGAGGACACAAGCAAGCAAGTAGAGAAGTTGGCAAAACACTACAAAAGTTCGAGTAATTTAATATTTGCAAAGATAGATGCTTCAGCAAATGAACATCCAAAACTGCAAGTGAATGACTTTCCCACACTTTTACTTTACAAAGCAAATGATAAGACAAATCGTTTGAAAGAATTGGCTGCATCCATCAACAAACACGTTAAAGTCAAGGATCAAGTCGCCAAAGATGAGCTATAG
Protein sequence

>MsG0280011306.01.T01

MPHFAEAANSLKDFGNSLVLAKVDGDRFTKAASFLGIKGYPTLLLFVNGTSQPYSGGFTADDIVIWARKRTGTPVIRISTEKAAEEFLKKYHTFLIGRFDKFEGPEYEEFVSAAKSDNETQFVEVSKVELAQVLYPDIKPTGNFLGIVKSEPERYNICSVHILSLACFCHMLIAPGCFAVFVFANIDDFKNLLDPLQEVARTFKSKIMFIYVDINDENLAKPFLTMFGLEESTNTVVAAFDNGMSSKFLLESKPTRSNIEEFCSKLVQGSLLTYFKSQPIPDNTEASVQVIVGKTFDEEILNSKKDVVLEVTGSSPGNSLLCKNRVFTPWCFNCEDTSKQVEKLAKHYKSSSNLIFAKIDASANEHPKLQVNDFPTLLLYKANDKTNRLKELAASINKHVKVKDQVAKDEL*