AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039657.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039657.01.T01 MTR_7g076830 98.171 328 5 1 1 328 51 377 0.0 661
MsG0780039657.01.T01 MTR_7g076800 96.605 324 7 1 5 328 56 375 0.0 640
MsG0780039657.01.T01 MTR_7g076820 96.259 294 11 0 35 328 91 384 0.0 590
MsG0780039657.01.T01 MTR_0915s0010 99.103 223 2 0 106 328 1 223 4.51e-163 456
MsG0780039657.01.T01 MTR_2g438110 36.400 250 150 3 84 332 26 267 1.02e-49 171
MsG0780039657.01.T01 MTR_2g099620 39.592 245 144 4 95 336 26 269 5.30e-48 166
MsG0780039657.01.T01 MTR_4g125970 37.828 267 153 4 83 336 19 285 5.87e-48 166
MsG0780039657.01.T01 MTR_2g099620 39.592 245 144 4 95 336 42 285 6.66e-48 166
MsG0780039657.01.T01 MTR_4g125970 37.828 267 153 4 83 336 36 302 1.49e-47 166
MsG0780039657.01.T01 MTR_2g039960 38.211 246 150 2 93 336 40 285 1.91e-47 165
MsG0780039657.01.T01 MTR_8g018400 38.618 246 149 2 93 336 40 285 7.49e-46 161
MsG0780039657.01.T01 MTR_3g449250 36.187 257 149 4 87 334 83 333 7.11e-41 150
MsG0780039657.01.T01 MTR_1g012420 37.553 237 141 5 95 325 48 283 1.32e-40 147
MsG0780039657.01.T01 MTR_3g449250 36.187 257 149 4 87 334 83 333 1.45e-40 150
MsG0780039657.01.T01 MTR_3g107420 36.709 237 143 5 95 325 48 283 2.82e-39 144
MsG0780039657.01.T01 MTR_4g010565 36.709 237 143 5 95 325 125 360 2.93e-39 145
MsG0780039657.01.T01 MTR_3g049990 38.208 212 127 2 88 295 146 357 2.11e-37 142
MsG0780039657.01.T01 MTR_2g041140 37.674 215 129 3 82 291 129 343 7.20e-37 140
MsG0780039657.01.T01 MTR_4g079320 36.585 205 127 2 95 296 20 224 1.83e-36 139
MsG0780039657.01.T01 MTR_5g090120 35.814 215 130 2 91 299 78 290 2.22e-35 135
MsG0780039657.01.T01 MTR_2g100230 33.061 245 148 4 95 330 102 339 4.27e-35 134
MsG0780039657.01.T01 MTR_5g027840 36.634 202 118 2 95 288 105 304 4.46e-34 131
MsG0780039657.01.T01 MTR_6g005320 28.897 263 161 3 100 336 255 517 5.19e-34 132
MsG0780039657.01.T01 MTR_2g032630 33.061 245 151 4 86 317 482 726 5.22e-34 132
MsG0780039657.01.T01 MTR_4g134170 28.897 263 161 3 100 336 293 555 1.01e-33 131
MsG0780039657.01.T01 MTR_4g105100 32.787 244 150 4 95 330 208 445 1.39e-33 130
MsG0780039657.01.T01 MTR_3g467550 34.975 203 126 2 95 291 118 320 1.99e-33 128
MsG0780039657.01.T01 MTR_8g027775 38.863 211 115 6 105 301 113 323 2.43e-33 129
MsG0780039657.01.T01 MTR_4g105100 32.787 244 150 4 95 330 208 445 2.46e-33 130
MsG0780039657.01.T01 MTR_3g107420 32.773 238 151 6 95 328 48 280 2.72e-33 125
MsG0780039657.01.T01 MTR_7g056830 33.597 253 149 7 95 330 11 261 2.99e-33 127
MsG0780039657.01.T01 MTR_6g005550 32.819 259 158 5 79 321 144 402 4.50e-33 129
MsG0780039657.01.T01 MTR_3g467550 35.294 204 124 3 95 291 118 320 4.74e-33 129
MsG0780039657.01.T01 MTR_8g027780 38.863 211 115 6 105 301 117 327 6.63e-33 127
MsG0780039657.01.T01 MTR_6g082080 33.202 253 150 7 95 330 11 261 7.29e-33 127
MsG0780039657.01.T01 MTR_8g027780 38.863 211 115 6 105 301 117 327 3.46e-32 126
MsG0780039657.01.T01 MTR_3g467550 35.149 202 123 3 97 291 89 289 4.98e-32 125
MsG0780039657.01.T01 MTR_8g027770 41.053 190 99 4 105 281 212 401 1.21e-31 125
MsG0780039657.01.T01 MTR_8g097000 41.237 194 101 5 112 292 306 499 2.61e-31 124
MsG0780039657.01.T01 MTR_6g033070 32.759 232 147 3 94 317 140 370 3.27e-31 123
MsG0780039657.01.T01 MTR_7g109720 34.975 203 125 2 95 291 233 434 3.64e-31 124
MsG0780039657.01.T01 MTR_4g112340 35.321 218 128 6 107 312 110 326 1.24e-30 122
MsG0780039657.01.T01 MTR_2g055850 34.649 228 139 4 95 312 92 319 2.58e-30 121
MsG0780039657.01.T01 MTR_2g066050 31.474 251 164 3 85 331 48 294 6.85e-30 119
MsG0780039657.01.T01 MTR_1g095810 31.019 216 135 2 95 296 146 361 7.67e-30 120
MsG0780039657.01.T01 MTR_1g046570 32.258 248 137 4 109 325 6 253 1.07e-29 117
MsG0780039657.01.T01 MTR_3g083690 32.227 211 128 4 93 288 144 354 2.03e-29 119
MsG0780039657.01.T01 MTR_1g054630 33.333 210 126 3 93 288 153 362 2.09e-29 119
MsG0780039657.01.T01 MTR_1g026830 31.718 227 138 4 85 296 139 363 2.58e-29 118
MsG0780039657.01.T01 MTR_2g007000 33.171 205 129 2 100 296 510 714 3.45e-29 119
MsG0780039657.01.T01 MTR_4g114120 30.872 298 168 10 12 288 74 354 5.13e-29 117
MsG0780039657.01.T01 MTR_1g061970 31.090 312 178 12 17 312 20 310 2.31e-28 115
MsG0780039657.01.T01 MTR_4g049910 35.484 248 126 12 90 324 51 277 6.02e-27 110
MsG0780039657.01.T01 MTR_4g077370 29.956 227 156 1 64 287 220 446 5.25e-26 107
MsG0780039657.01.T01 MTR_4g077370 29.493 217 126 4 94 302 2 199 5.11e-17 82.0
MsG0780039657.01.T01 MTR_8g031340 88.462 52 6 0 193 244 1 52 3.02e-25 98.6
MsG0780039657.01.T01 MTR_5g092560 35.638 188 112 3 119 299 101 286 5.08e-25 106
MsG0780039657.01.T01 MTR_6g039840 30.332 211 124 4 95 285 111 318 8.08e-24 102
MsG0780039657.01.T01 MTR_3g071620 31.731 208 134 4 100 299 22 229 2.35e-23 101
MsG0780039657.01.T01 MTR_1g083130 31.535 241 148 5 95 318 27 267 2.49e-23 101
MsG0780039657.01.T01 MTR_8g018370 32.850 207 112 5 124 326 3 186 1.87e-22 96.3
MsG0780039657.01.T01 MTR_7g057250 26.378 254 137 5 85 289 154 406 3.01e-22 98.2
MsG0780039657.01.T01 MTR_6g056080 30.622 209 133 2 93 289 102 310 4.60e-22 97.4
MsG0780039657.01.T01 MTR_1g102410 31.579 209 115 3 110 290 60 268 6.48e-22 97.1
MsG0780039657.01.T01 MTR_4g068990 35.106 188 113 3 119 299 101 286 1.03e-21 96.7
MsG0780039657.01.T01 MTR_2g043360 30.698 215 123 5 112 300 60 274 4.55e-21 94.4
MsG0780039657.01.T01 MTR_4g459350 33.125 160 99 3 112 263 60 219 6.84e-21 91.3
MsG0780039657.01.T01 MTR_4g059460 29.767 215 125 4 112 300 63 277 7.98e-21 93.6
MsG0780039657.01.T01 MTR_7g100820 33.702 181 116 3 104 282 144 322 6.10e-20 91.3
MsG0780039657.01.T01 MTR_3g118120 29.545 220 136 5 73 280 118 330 6.51e-19 87.8
MsG0780039657.01.T01 MTR_8g032230 34.848 132 83 3 95 224 11 141 1.85e-17 79.3
MsG0780039657.01.T01 MTR_2g063080 25.342 292 164 8 52 294 54 340 2.89e-17 83.2
MsG0780039657.01.T01 MTR_6g039840 32.090 134 77 2 163 285 12 142 1.15e-14 75.1
MsG0780039657.01.T01 MTR_5g077690 31.210 157 81 5 132 261 71 227 3.41e-13 70.5
MsG0780039657.01.T01 MTR_4g131750 26.455 189 123 4 103 277 91 277 3.44e-12 67.4
MsG0780039657.01.T01 MTR_5g069330 25.837 209 149 4 94 296 7 215 7.35e-12 66.2
MsG0780039657.01.T01 MTR_5g069330 25.837 209 149 4 94 296 3 211 8.19e-12 66.2
MsG0780039657.01.T01 MTR_4g112320 30.070 143 93 4 177 312 2 144 1.32e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039657.01.T01 AT4G00660 87.119 295 37 1 35 328 72 366 0.0 535
MsG0780039657.01.T01 AT4G00660 87.119 295 37 1 35 328 72 366 0.0 535
MsG0780039657.01.T01 AT2G45810 83.729 295 45 2 35 328 97 389 5.28e-180 509
MsG0780039657.01.T01 AT3G61240 80.678 295 55 2 35 328 66 359 6.99e-174 492
MsG0780039657.01.T01 AT3G61240 80.678 295 55 2 35 328 66 359 6.99e-174 492
MsG0780039657.01.T01 AT3G19760 36.402 239 145 2 95 332 37 269 6.24e-51 174
MsG0780039657.01.T01 AT3G13920 39.754 244 145 2 95 336 41 284 3.04e-49 170
MsG0780039657.01.T01 AT3G13920 39.754 244 145 2 95 336 31 274 3.80e-49 169
MsG0780039657.01.T01 AT3G13920 39.754 244 145 2 95 336 41 284 4.99e-49 169
MsG0780039657.01.T01 AT3G13920 39.754 244 145 2 95 336 45 288 5.97e-49 169
MsG0780039657.01.T01 AT1G51380 33.865 251 155 3 90 335 15 259 1.35e-47 162
MsG0780039657.01.T01 AT1G54270 39.592 245 144 4 95 336 41 284 6.47e-47 164
MsG0780039657.01.T01 AT1G72730 38.211 246 150 2 93 336 41 286 8.86e-47 164
MsG0780039657.01.T01 AT1G51380 33.865 251 155 3 90 335 15 259 1.01e-46 163
MsG0780039657.01.T01 AT3G13920 39.407 236 138 3 106 336 44 279 9.20e-46 160
MsG0780039657.01.T01 AT1G54270 39.241 237 137 5 106 336 44 279 1.91e-43 154
MsG0780039657.01.T01 AT1G51380 33.740 246 154 4 90 327 15 259 4.16e-42 148
MsG0780039657.01.T01 AT1G51380 33.740 246 154 4 90 327 15 259 6.63e-42 148
MsG0780039657.01.T01 AT5G11170 33.969 262 162 6 74 325 23 283 3.98e-39 143
MsG0780039657.01.T01 AT5G11200 33.969 262 162 6 74 325 23 283 3.98e-39 143
MsG0780039657.01.T01 AT5G63120 34.074 270 161 5 82 336 147 414 5.94e-39 144
MsG0780039657.01.T01 AT5G63120 34.074 270 161 5 82 336 147 414 6.27e-39 144
MsG0780039657.01.T01 AT5G63120 34.074 270 161 5 82 336 147 414 6.27e-39 144
MsG0780039657.01.T01 AT5G63120 34.074 270 161 5 82 336 147 414 6.27e-39 144
MsG0780039657.01.T01 AT5G63120 34.074 270 161 5 82 336 147 414 2.85e-38 144
MsG0780039657.01.T01 AT1G77030 37.561 205 125 2 95 296 30 234 3.02e-37 142
MsG0780039657.01.T01 AT3G06480 35.156 256 153 5 75 317 411 666 6.33e-37 141
MsG0780039657.01.T01 AT3G06480 35.156 256 153 5 75 317 411 666 9.11e-37 140
MsG0780039657.01.T01 AT3G18600 34.400 250 154 4 95 336 91 338 5.03e-36 137
MsG0780039657.01.T01 AT5G14610 36.134 238 139 5 83 307 153 390 6.11e-36 136
MsG0780039657.01.T01 AT1G55150 31.276 243 155 3 95 330 106 343 7.87e-36 135
MsG0780039657.01.T01 AT5G65900 36.515 241 145 3 95 327 156 396 1.36e-35 136
MsG0780039657.01.T01 AT1G55150 31.276 243 155 3 95 330 131 368 1.36e-35 135
MsG0780039657.01.T01 AT4G16630 36.449 214 132 2 82 291 156 369 1.45e-35 137
MsG0780039657.01.T01 AT5G14610 36.134 238 139 5 83 307 145 382 2.00e-35 136
MsG0780039657.01.T01 AT5G14610 36.134 238 139 5 83 307 145 382 2.07e-35 136
MsG0780039657.01.T01 AT5G14610 36.134 238 139 5 83 307 153 390 2.45e-35 136
MsG0780039657.01.T01 AT3G22310 33.755 237 146 3 97 324 120 354 5.52e-35 134
MsG0780039657.01.T01 AT3G22310 33.755 237 146 3 97 324 120 354 6.09e-35 134
MsG0780039657.01.T01 AT3G01540 34.274 248 150 5 83 317 142 389 7.19e-35 134
MsG0780039657.01.T01 AT3G01540 34.274 248 150 5 83 317 142 389 7.52e-35 134
MsG0780039657.01.T01 AT3G01540 34.274 248 150 5 83 317 142 389 7.52e-35 134
MsG0780039657.01.T01 AT3G01540 34.274 248 150 5 83 317 142 389 7.52e-35 134
MsG0780039657.01.T01 AT3G22330 33.471 242 144 5 103 334 114 348 3.17e-34 132
MsG0780039657.01.T01 AT1G31970 34.061 229 139 2 111 327 132 360 3.27e-34 132
MsG0780039657.01.T01 AT2G33730 28.731 268 165 4 95 336 315 582 1.12e-33 131
MsG0780039657.01.T01 AT3G58570 35.514 214 120 3 93 288 146 359 2.57e-33 130
MsG0780039657.01.T01 AT5G11200 33.184 223 140 5 74 288 23 244 6.45e-33 127
MsG0780039657.01.T01 AT5G14610 37.198 207 123 4 108 307 45 251 7.32e-33 127
MsG0780039657.01.T01 AT5G14610 37.198 207 123 4 108 307 45 251 7.32e-33 127
MsG0780039657.01.T01 AT5G60990 31.034 261 155 5 95 330 11 271 9.08e-33 127
MsG0780039657.01.T01 AT5G11200 33.184 223 140 5 74 288 23 244 9.21e-33 127
MsG0780039657.01.T01 AT1G16280 32.780 241 154 3 90 322 55 295 1.05e-32 127
MsG0780039657.01.T01 AT5G14610 37.198 207 123 4 108 307 244 450 2.23e-32 127
MsG0780039657.01.T01 AT5G26742 34.874 238 136 4 110 334 119 350 2.82e-32 127
MsG0780039657.01.T01 AT5G26742 34.874 238 136 4 110 334 119 350 2.82e-32 127
MsG0780039657.01.T01 AT3G58510 32.540 252 152 6 93 327 151 401 3.77e-32 126
MsG0780039657.01.T01 AT3G58510 32.540 252 152 6 93 327 151 401 3.77e-32 126
MsG0780039657.01.T01 AT3G58510 32.540 252 152 6 93 327 151 401 3.77e-32 126
MsG0780039657.01.T01 AT2G42520 34.762 210 123 3 93 288 159 368 9.97e-32 125
MsG0780039657.01.T01 AT2G42520 34.762 210 123 3 93 288 159 368 9.97e-32 125
MsG0780039657.01.T01 AT2G42520 34.762 210 123 3 93 288 159 368 9.97e-32 125
MsG0780039657.01.T01 AT2G47330 35.468 203 124 3 95 291 230 431 2.40e-31 125
MsG0780039657.01.T01 AT3G02065 33.047 233 144 4 95 317 112 342 3.59e-31 123
MsG0780039657.01.T01 AT3G02065 33.047 233 144 4 95 317 112 342 3.59e-31 123
MsG0780039657.01.T01 AT5G63630 37.083 240 136 7 78 303 40 278 5.52e-31 122
MsG0780039657.01.T01 AT5G26742 35.747 221 123 4 127 334 43 257 7.56e-31 123
MsG0780039657.01.T01 AT5G08610 35.338 266 154 8 77 325 367 631 8.91e-31 123
MsG0780039657.01.T01 AT5G63630 37.083 240 136 7 78 303 234 472 9.32e-31 123
MsG0780039657.01.T01 AT3G09620 32.000 225 142 4 113 327 417 640 5.33e-30 121
MsG0780039657.01.T01 AT1G20920 33.981 206 125 4 113 308 211 415 5.50e-30 121
MsG0780039657.01.T01 AT3G09620 32.000 225 142 4 113 327 416 639 5.69e-30 121
MsG0780039657.01.T01 AT5G08620 39.320 206 111 6 83 275 71 275 9.25e-30 119
MsG0780039657.01.T01 AT1G28180 30.180 222 145 3 123 336 3 222 7.61e-29 114
MsG0780039657.01.T01 AT1G20920 33.010 206 128 3 100 296 536 740 7.63e-29 117
MsG0780039657.01.T01 AT1G20920 33.010 206 128 3 100 296 536 740 7.63e-29 117
MsG0780039657.01.T01 AT1G20920 33.010 206 128 3 100 296 536 740 7.63e-29 117
MsG0780039657.01.T01 AT1G20920 33.010 206 128 3 100 296 536 740 7.63e-29 117
MsG0780039657.01.T01 AT1G20920 33.010 206 128 3 100 296 536 740 7.63e-29 117
MsG0780039657.01.T01 AT1G20920 33.010 206 128 3 100 296 536 740 7.63e-29 117
MsG0780039657.01.T01 AT5G51280 30.556 216 136 2 95 296 148 363 2.11e-28 115
MsG0780039657.01.T01 AT4G33370 28.352 261 160 4 62 296 55 314 8.54e-28 114
MsG0780039657.01.T01 AT3G53110 30.657 274 176 8 77 336 72 345 4.79e-26 108
MsG0780039657.01.T01 AT3G02065 33.010 206 126 4 122 317 2 205 1.31e-25 105
MsG0780039657.01.T01 AT5G11170 33.000 200 127 5 132 325 2 200 2.11e-25 104
MsG0780039657.01.T01 AT5G54910 32.222 270 161 7 48 299 17 282 4.39e-25 106
MsG0780039657.01.T01 AT2G07750 36.816 201 113 5 95 281 377 577 6.31e-25 106
MsG0780039657.01.T01 AT1G63250 36.816 201 113 5 95 281 330 530 1.31e-24 105
MsG0780039657.01.T01 AT1G71370 32.663 199 125 4 100 289 23 221 2.21e-24 104
MsG0780039657.01.T01 AT1G71280 31.841 201 124 3 100 293 24 218 3.62e-24 102
MsG0780039657.01.T01 AT4G34910 32.258 217 135 3 95 299 48 264 8.43e-24 102
MsG0780039657.01.T01 AT1G71280 31.841 201 124 3 100 293 24 218 1.04e-23 100
MsG0780039657.01.T01 AT3G06980 26.923 260 171 6 32 280 321 572 2.34e-22 98.6
MsG0780039657.01.T01 AT2G40700 32.381 210 116 5 112 296 50 258 4.84e-22 97.4
MsG0780039657.01.T01 AT5G62190 30.137 219 141 2 84 290 87 305 3.60e-21 95.1
MsG0780039657.01.T01 AT5G05450 29.353 201 133 4 100 291 23 223 6.82e-21 94.0
MsG0780039657.01.T01 AT4G09730 30.055 183 116 2 95 268 114 293 1.13e-20 93.6
MsG0780039657.01.T01 AT1G12770 27.826 230 135 5 95 294 112 340 2.72e-20 92.0
MsG0780039657.01.T01 AT1G12770 27.826 230 135 5 95 294 112 340 2.72e-20 92.0
MsG0780039657.01.T01 AT3G09720 34.066 182 116 3 104 283 152 331 3.73e-20 91.7
MsG0780039657.01.T01 AT3G09720 34.066 182 116 3 104 283 152 331 3.73e-20 91.7
MsG0780039657.01.T01 AT3G16840 26.496 234 123 6 104 289 201 433 1.56e-18 87.0
MsG0780039657.01.T01 AT3G16840 26.496 234 123 6 104 289 202 434 1.57e-18 87.0
MsG0780039657.01.T01 AT5G19210 29.787 188 123 3 99 277 82 269 3.16e-16 79.7
MsG0780039657.01.T01 AT1G28180 30.702 114 71 2 123 228 3 116 6.77e-13 65.1

Find 81 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGCATAATGTCATCTTTC+AGG 0.227927 7:+67298277 None:intergenic
TTGAAGTCCTTTACAGTAAC+AGG 0.246299 7:+67297567 None:intergenic
CAATTGGAATACTTTCTTCT+TGG 0.278141 7:+67299468 None:intergenic
TCTATTGAAGGCTGGAACTC+TGG 0.296112 7:+67297648 None:intergenic
CGCAAGATCCAATATTCTTC+CGG 0.297683 7:+67298221 None:intergenic
AGTATTCCAATTGCCCTTAC+TGG 0.310499 7:-67299458 MsG0780039657.01.T01:CDS
ACATTAGGATTTGACGGGTT+GGG 0.337506 7:+67297604 None:intergenic
TCCATAAGGTTAATGATATA+CGG 0.345859 7:+67297525 None:intergenic
GCCGTATATCATTAACCTTA+TGG 0.349321 7:-67297526 MsG0780039657.01.T01:CDS
TTTGAAGCGTGAGCTGCTAA+TGG 0.357889 7:-67299528 MsG0780039657.01.T01:CDS
CATTAGGATTTGACGGGTTG+GGG 0.365646 7:+67297605 None:intergenic
GCAAGATCCAATATTCTTCC+GGG 0.393072 7:+67298222 None:intergenic
GAAATGTAGCTGAAAACATT+AGG 0.406270 7:+67297589 None:intergenic
GCATTTACAAATTCAAGTTA+TGG 0.408398 7:-67298319 MsG0780039657.01.T01:CDS
TGGTACTCCCGGAAGAATAT+TGG 0.409995 7:-67298229 MsG0780039657.01.T01:CDS
TTGAAGCGTGAGCTGCTAAT+GGG 0.420240 7:-67299527 MsG0780039657.01.T01:CDS
TCACTGCCAGTAAGGGCAAT+TGG 0.428644 7:+67299452 None:intergenic
TGCATTTAGCATTCCTGCAT+TGG 0.429066 7:-67299390 MsG0780039657.01.T01:CDS
CAAGATAACAATATTATTCA+AGG 0.434070 7:-67299356 MsG0780039657.01.T01:intron
TGTTTGTTAGTTCACAAGAT+TGG 0.435039 7:-67300931 MsG0780039657.01.T01:intron
GGAATACTTTCTTCTTGGAT+AGG 0.435424 7:+67299473 None:intergenic
TAATAAAATCTACAATATCT+TGG 0.435913 7:+67297398 None:intergenic
GAATACTTTCTTCTTGGATA+GGG 0.439223 7:+67299474 None:intergenic
CCAGGACGTGACAGCAACTA+AGG 0.441774 7:-67299573 MsG0780039657.01.T01:intron
AATATTGGATCTTGCGAAGA+AGG 0.450552 7:-67298214 MsG0780039657.01.T01:CDS
CTGGCAGTGACATTCTTGCT+AGG 0.452575 7:-67299439 MsG0780039657.01.T01:CDS
CTGAAAACATTAGGATTTGA+CGG 0.454135 7:+67297598 None:intergenic
CTATTGAAGGCTGGAACTCT+GGG 0.458276 7:+67297649 None:intergenic
AGCAGCAACAACAGTGGCTG+AGG 0.460244 7:-67302496 MsG0780039657.01.T01:CDS
TGAATCAGCTGCTCTATTGA+AGG 0.467240 7:+67297636 None:intergenic
CAAGAATGTCACTGCCAGTA+AGG 0.471837 7:+67299444 None:intergenic
GTCCTATAGCGTGTATCAGC+TGG 0.472098 7:+67300887 None:intergenic
TACATTTCCTGTTACTGTAA+AGG 0.480320 7:-67297574 MsG0780039657.01.T01:CDS
TGTCGGTACCACCACCCAAC+TGG 0.480791 7:+67302468 None:intergenic
GTACCAACTAGCAGATGAAC+AGG 0.481696 7:+67298246 None:intergenic
ATTCAAGTTATGGTCACAAC+AGG 0.487922 7:-67298309 MsG0780039657.01.T01:CDS
TCTCAAGTGTGTAAAGAGCT+TGG 0.494662 7:-67298345 MsG0780039657.01.T01:CDS
TCAGAGTAAGCTCATCCATA+AGG 0.502322 7:+67297511 None:intergenic
AACATTAGGATTTGACGGGT+TGG 0.502790 7:+67297603 None:intergenic
AACTAAGGGAAATGAGTTTG+AGG 0.503108 7:-67299558 MsG0780039657.01.T01:CDS
CACCAGCTGATACACGCTAT+AGG 0.511848 7:-67300889 MsG0780039657.01.T01:CDS
TGAAAACATTAGGATTTGAC+GGG 0.518693 7:+67297599 None:intergenic
CTGAGGAGGAACCAGTTGGG+TGG 0.527919 7:-67302479 MsG0780039657.01.T01:CDS
TGTTAGTTCACAAGATTGGA+AGG 0.531041 7:-67300927 MsG0780039657.01.T01:intron
TATACGAGAAGGGGTTTGAA+AGG 0.535258 7:-67299502 MsG0780039657.01.T01:CDS
CTCAACCTCCTCGACGACAT+TGG 0.535435 7:+67302445 None:intergenic
CTTTCTTCTTGGATAGGGGA+AGG 0.536300 7:+67299479 None:intergenic
CAACCTGTTCATCTGCTAGT+TGG 0.542417 7:-67298249 MsG0780039657.01.T01:CDS
TGCAGAGCCAACTCTCGTGT+TGG 0.546126 7:+67298372 None:intergenic
AAGAATGTCACTGCCAGTAA+GGG 0.548067 7:+67299445 None:intergenic
TCAGCTGCTCTATTGAAGGC+TGG 0.549430 7:+67297640 None:intergenic
TATGGATGAGCTTACTCTGA+AGG 0.555621 7:-67297508 MsG0780039657.01.T01:CDS
TGGCAGTGACATTCTTGCTA+GGG 0.556476 7:-67299438 MsG0780039657.01.T01:CDS
CATCTGCTAGTTGGTACTCC+CGG 0.556776 7:-67298240 MsG0780039657.01.T01:CDS
ACTCGTTCCAACACGAGAGT+TGG 0.561915 7:-67298379 MsG0780039657.01.T01:CDS
TGGCTGAGGAGGAACCAGTT+GGG 0.564082 7:-67302482 MsG0780039657.01.T01:CDS
CATAATGTCATCTTTCAGGC+TGG 0.564266 7:+67298281 None:intergenic
AGGAGGAACCAGTTGGGTGG+TGG 0.572405 7:-67302476 MsG0780039657.01.T01:CDS
TTCTATGCTTGTCATGGATG+AGG 0.575458 7:-67298169 MsG0780039657.01.T01:intron
AATACTTTCTTCTTGGATAG+GGG 0.577459 7:+67299475 None:intergenic
AAATCTACAATATCTTGGCA+TGG 0.588035 7:+67297403 None:intergenic
CTAATGGGAATATACGAGAA+GGG 0.590133 7:-67299512 MsG0780039657.01.T01:CDS
AGATTGTTCTATGCTTGTCA+TGG 0.591666 7:-67298175 MsG0780039657.01.T01:CDS
AGCAACAACAGTGGCTGAGG+AGG 0.595757 7:-67302493 MsG0780039657.01.T01:CDS
CTCCTCGACGACATTGGTGT+CGG 0.599782 7:+67302451 None:intergenic
TTTATGCATTTGTGGAGGAG+AGG 0.600490 7:-67297473 MsG0780039657.01.T01:CDS
ATGGATGAGCTTACTCTGAA+GGG 0.601953 7:-67297507 MsG0780039657.01.T01:CDS
GTGGCTGAGGAGGAACCAGT+TGG 0.607435 7:-67302483 MsG0780039657.01.T01:CDS
CTATAGCGTGTATCAGCTGG+TGG 0.607950 7:+67300890 None:intergenic
AGTCTGAAACAAATGACCCT+AGG 0.611339 7:-67302412 MsG0780039657.01.T01:intron
ATATTGGATCTTGCGAAGAA+GGG 0.615940 7:-67298213 MsG0780039657.01.T01:CDS
GCTAATGGGAATATACGAGA+AGG 0.618271 7:-67299513 MsG0780039657.01.T01:CDS
ATTAGGATTTGACGGGTTGG+GGG 0.621303 7:+67297606 None:intergenic
CAAGTTATGGTCACAACAGG+TGG 0.624109 7:-67298306 MsG0780039657.01.T01:CDS
TAATGGGAATATACGAGAAG+GGG 0.624597 7:-67299511 MsG0780039657.01.T01:CDS
CAGGACGTGACAGCAACTAA+GGG 0.624954 7:-67299572 MsG0780039657.01.T01:CDS
CGACACCAATGTCGTCGAGG+AGG 0.650582 7:-67302450 MsG0780039657.01.T01:CDS
AGCAGCAGCAGCAACAACAG+TGG 0.688421 7:-67302502 MsG0780039657.01.T01:CDS
TACCGACACCAATGTCGTCG+AGG 0.697097 7:-67302453 MsG0780039657.01.T01:CDS
TATTGAAGGCTGGAACTCTG+GGG 0.727198 7:+67297650 None:intergenic
TGATACACGCTATAGGACAG+AGG 0.741307 7:-67300882 MsG0780039657.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - Chr7:67299171-67299190 MsG0780039657.01.T01:intron 0.0%
!! TATATATATATATAATATAT+AGG + Chr7:67299164-67299183 None:intergenic 0.0%
!! AAGTTATTAAATAAATCATA+AGG + Chr7:67299420-67299439 None:intergenic 10.0%
!! ATATATATATATATATAGGA+GGG - Chr7:67299181-67299200 MsG0780039657.01.T01:intron 10.0%
!! TATATATATATATATATAGG+AGG - Chr7:67299180-67299199 MsG0780039657.01.T01:intron 10.0%
!! TGAATTAATATCAAAATTAA+CGG - Chr7:67299851-67299870 MsG0780039657.01.T01:intron 10.0%
!! TGAATTAATATCAAAATTAA+TGG + Chr7:67299870-67299851 None:intergenic 10.0%
!!! AAAGTATATATTTTATATTG+AGG - Chr7:67301905-67301924 MsG0780039657.01.T01:intron 10.0%
!!! CAATATAAAATATATACTTT+TGG + Chr7:67301905-67301924 None:intergenic 10.0%
!!! TTAAATTCATATATTTCTAT+CGG - Chr7:67299539-67299558 MsG0780039657.01.T01:CDS 10.0%
!!! TTAATTTTGATATTAATTCA+TGG - Chr7:67299254-67299273 MsG0780039657.01.T01:intron 10.0%
!!! TTAATTTTGATATTAATTCA+TGG + Chr7:67299273-67299254 None:intergenic 10.0%
!!! TTTTTTTAATATGCATAATT+TGG - Chr7:67301207-67301226 MsG0780039657.01.T01:intron 10.0%
!! ATAGTAAAAATGAAAAATCT+CGG + Chr7:67300878-67300897 None:intergenic 15.0%
!! ATATATATATACACATATAG+AGG + Chr7:67299928-67299947 None:intergenic 15.0%
!! GATTTATTTAATAACTTTCT+TGG - Chr7:67299423-67299442 MsG0780039657.01.T01:CDS 15.0%
!! TTTGATCATATATATTGTTT+GGG - Chr7:67300040-67300059 MsG0780039657.01.T01:intron 15.0%
!!! AATTTTGCTTATAATTCATT+AGG + Chr7:67301010-67301029 None:intergenic 15.0%
!!! ATTTTGAATTATTGATGTTA+AGG - Chr7:67297950-67297969 MsG0780039657.01.T01:intron 15.0%
!!! ATTTTGCTTATAATTCATTA+GGG + Chr7:67301009-67301028 None:intergenic 15.0%
!!! TATAAATTTTAGAATTTCCT+TGG - Chr7:67300895-67300914 MsG0780039657.01.T01:CDS 15.0%
!!! TTTTGATCATATATATTGTT+TGG - Chr7:67300039-67300058 MsG0780039657.01.T01:intron 15.0%
!! AAAAAAAAACACAGCAATAT+TGG + Chr7:67297862-67297881 None:intergenic 20.0%
!! AATATTCAGAAAAACAAGTT+TGG - Chr7:67300792-67300811 MsG0780039657.01.T01:intron 20.0%
!! AATCATATTATTAGTCATGA+AGG - Chr7:67301123-67301142 MsG0780039657.01.T01:intron 20.0%
!! ATCATATTATTAGTCATGAA+GGG - Chr7:67301124-67301143 MsG0780039657.01.T01:intron 20.0%
!! ATGAATTAATATCAAGAACA+TGG + Chr7:67301315-67301334 None:intergenic 20.0%
!! CAAGATAACAATATTATTCA+AGG - Chr7:67300635-67300654 MsG0780039657.01.T01:intron 20.0%
!! TAATTGCAAAAGTTCATAAT+TGG - Chr7:67299720-67299739 MsG0780039657.01.T01:intron 20.0%
!! TAGTAAAAATGAAAAATCTC+GGG + Chr7:67300877-67300896 None:intergenic 20.0%
!! TATTATTATATGTCTCAAGT+TGG + Chr7:67298505-67298524 None:intergenic 20.0%
!! TTGGCAACAAAAAAATTAAT+AGG + Chr7:67298486-67298505 None:intergenic 20.0%
!!! ATATGCATAAAAAGTATAAG+TGG + Chr7:67298651-67298670 None:intergenic 20.0%
!!! ATTTTAAATCAACAATCACT+TGG + Chr7:67300009-67300028 None:intergenic 20.0%
!!! TAATGTGTTTGTTTTTCTTA+AGG - Chr7:67299002-67299021 MsG0780039657.01.T01:intron 20.0%
!!! TTAATGTTTGTTGATTTTGA+TGG - Chr7:67298092-67298111 MsG0780039657.01.T01:intron 20.0%
!!! TTCTTGATGATATTGTTTTA+TGG - Chr7:67302013-67302032 MsG0780039657.01.T01:intron 20.0%
!!! TTTTGAGTGATTATTGATTT+AGG - Chr7:67301534-67301553 MsG0780039657.01.T01:intron 20.0%
! AAAAAAATAGAAGACTCAGT+AGG + Chr7:67301382-67301401 None:intergenic 25.0%
! AAGTTAGTTGAAAATAGCAA+AGG - Chr7:67301443-67301462 MsG0780039657.01.T01:intron 25.0%
! AATGAAACAGAGACATAATA+AGG + Chr7:67300716-67300735 None:intergenic 25.0%
! ACGCTATATAGATTAGTAAA+TGG + Chr7:67301969-67301988 None:intergenic 25.0%
! ATATATACACATATAGAGGA+GGG + Chr7:67299924-67299943 None:intergenic 25.0%
! CAAAATTAATGGCTAAGATT+TGG + Chr7:67299243-67299262 None:intergenic 25.0%
! CAAATCCTTCATAAGAATAT+AGG + Chr7:67298069-67298088 None:intergenic 25.0%
! CACTCAGAAATTGATAAATA+CGG + Chr7:67297989-67298008 None:intergenic 25.0%
! CTTAGAAAATCATGCAATTT+GGG - Chr7:67299390-67299409 MsG0780039657.01.T01:CDS 25.0%
! GAAAATTAACTAAACCATAG+TGG + Chr7:67298814-67298833 None:intergenic 25.0%
! GAAATTGATAAATACGGAAA+AGG + Chr7:67297983-67298002 None:intergenic 25.0%
! GTGAAAACAATCCAAATTAA+CGG + Chr7:67299751-67299770 None:intergenic 25.0%
! TAACTCTTTATACTTACTCT+TGG - Chr7:67299887-67299906 MsG0780039657.01.T01:intron 25.0%
! TATATATACACATATAGAGG+AGG + Chr7:67299925-67299944 None:intergenic 25.0%
! TCCATAAGGTTAATGATATA+CGG + Chr7:67302469-67302488 None:intergenic 25.0%
! TCTTAGAAAATCATGCAATT+TGG - Chr7:67299389-67299408 MsG0780039657.01.T01:CDS 25.0%
! TTAAATTAAAACGCAAACCA+AGG + Chr7:67299703-67299722 None:intergenic 25.0%
! TTACCTACATCAATAAGTAA+AGG - Chr7:67299462-67299481 MsG0780039657.01.T01:CDS 25.0%
! TTCTTATACTGTTGAAAGTA+AGG - Chr7:67298151-67298170 MsG0780039657.01.T01:intron 25.0%
! TTTCAACTAACTTTGACAAT+TGG + Chr7:67301436-67301455 None:intergenic 25.0%
!! ACTCAGATTTTCGAATAAAA+TGG - Chr7:67299677-67299696 MsG0780039657.01.T01:intron 25.0%
!! CTAAAAATAAGTTTGTTCCA+AGG + Chr7:67300915-67300934 None:intergenic 25.0%
!! GCATTTACAAATTCAAGTTA+TGG - Chr7:67301672-67301691 MsG0780039657.01.T01:intron 25.0%
!! GTTTATTGATTGAGTAATTG+TGG - Chr7:67298608-67298627 MsG0780039657.01.T01:intron 25.0%
!! TACACAATTTTATGCATTTG+TGG - Chr7:67302510-67302529 MsG0780039657.01.T01:CDS 25.0%
!!! ATGATATTGTTTTATGGAAG+AGG - Chr7:67302019-67302038 MsG0780039657.01.T01:intron 25.0%
!!! CATGATTTTCTAAGATTCAT+AGG + Chr7:67299384-67299403 None:intergenic 25.0%
!!! CCTAAATACTCTTTTTTCTA+AGG - Chr7:67302555-67302574 MsG0780039657.01.T01:CDS 25.0%
!!! CCTTAGAAAAAAGAGTATTT+AGG + Chr7:67302558-67302577 None:intergenic 25.0%
!!! GTATTATCATGGTTTTGTTT+AGG - Chr7:67299775-67299794 MsG0780039657.01.T01:intron 25.0%
!!! TAAGTTGTTGTTTTAGACAT+TGG - Chr7:67300939-67300958 MsG0780039657.01.T01:intron 25.0%
!!! TAGGTTTTTTTTTAAGCCTA+TGG + Chr7:67298396-67298415 None:intergenic 25.0%
!!! TGGAACAAACTTATTTTTAG+TGG - Chr7:67300915-67300934 MsG0780039657.01.T01:CDS 25.0%
AAAGGCAATGATCAAAACAT+TGG + Chr7:67301565-67301584 None:intergenic 30.0%
AAATTTCACTTATATCACGC+CGG - Chr7:67301232-67301251 MsG0780039657.01.T01:intron 30.0%
AAGACCCTTAGTAAAATTCA+GGG + Chr7:67301860-67301879 None:intergenic 30.0%
AATACTTTCTTCTTGGATAG+GGG + Chr7:67300519-67300538 None:intergenic 30.0%
AATTATTGATGTTAAGGCAC+GGG - Chr7:67297956-67297975 MsG0780039657.01.T01:intron 30.0%
ACAAAACCATGATAATACAC+AGG + Chr7:67299773-67299792 None:intergenic 30.0%
ACATATCATCTGATAGACTT+GGG + Chr7:67298025-67298044 None:intergenic 30.0%
ACTCTAATATGATTCTTCAC+TGG + Chr7:67298883-67298902 None:intergenic 30.0%
AGAAGCCTATATTCTTATGA+AGG - Chr7:67298061-67298080 MsG0780039657.01.T01:intron 30.0%
AGGCAAAGTATATAAGTAGT+AGG + Chr7:67298466-67298485 None:intergenic 30.0%
AGTCAATTTATGAACCTGAT+AGG - Chr7:67298696-67298715 MsG0780039657.01.T01:intron 30.0%
ATACTTACTCTTAGAGTCAA+TGG + Chr7:67299209-67299228 None:intergenic 30.0%
ATCAACAATCACTTGGAAAT+TGG + Chr7:67300002-67300021 None:intergenic 30.0%
ATTAAATCCGTTTGCACTAA+AGG - Chr7:67299644-67299663 MsG0780039657.01.T01:intron 30.0%
ATTATGTCTCTGTTTCATTC+TGG - Chr7:67300717-67300736 MsG0780039657.01.T01:intron 30.0%
CAAATGTTCTGATAGTTTCT+TGG - Chr7:67301408-67301427 MsG0780039657.01.T01:intron 30.0%
CAATTGGAATACTTTCTTCT+TGG + Chr7:67300526-67300545 None:intergenic 30.0%
CTGAAAACATTAGGATTTGA+CGG + Chr7:67302396-67302415 None:intergenic 30.0%
CTGCTAAATGTTATCATCTT+GGG - Chr7:67300366-67300385 MsG0780039657.01.T01:intron 30.0%
CTGGGAAGAAAATTAACATA+AGG + Chr7:67300402-67300421 None:intergenic 30.0%
GAAATGTAGCTGAAAACATT+AGG + Chr7:67302405-67302424 None:intergenic 30.0%
GAATACTTTCTTCTTGGATA+GGG + Chr7:67300520-67300539 None:intergenic 30.0%
GAATTATTGATGTTAAGGCA+CGG - Chr7:67297955-67297974 MsG0780039657.01.T01:intron 30.0%
GAGATTTCTGTATAGGTTAT+GGG + Chr7:67299339-67299358 None:intergenic 30.0%
GATCCTTTACTTATTGATGT+AGG + Chr7:67299468-67299487 None:intergenic 30.0%
GCATCACAGAACAAAATAAA+AGG + Chr7:67301583-67301602 None:intergenic 30.0%
GTTTCAATGTTGTTCAATAG+TGG - Chr7:67297685-67297704 MsG0780039657.01.T01:intron 30.0%
TACATATCATCTGATAGACT+TGG + Chr7:67298026-67298045 None:intergenic 30.0%
TACATTTCCTGTTACTGTAA+AGG - Chr7:67302417-67302436 MsG0780039657.01.T01:CDS 30.0%
TAGATTGCTTACAACCAAAT+CGG + Chr7:67298784-67298803 None:intergenic 30.0%
TATATATCTTTCTTCCTCTC+AGG - Chr7:67302303-67302322 MsG0780039657.01.T01:intron 30.0%
TGAAAACATTAGGATTTGAC+GGG + Chr7:67302395-67302414 None:intergenic 30.0%
TGACATGTAGCACATAATTT+AGG + Chr7:67300297-67300316 None:intergenic 30.0%
TGCTAAATGTTATCATCTTG+GGG - Chr7:67300367-67300386 MsG0780039657.01.T01:intron 30.0%
TTAGCAACAAAACTTACACA+AGG + Chr7:67302128-67302147 None:intergenic 30.0%
TTAGTCATGAAGGGTAATTT+AGG - Chr7:67301133-67301152 MsG0780039657.01.T01:intron 30.0%
TTTATCAATTTCTGAGTGAG+TGG - Chr7:67297991-67298010 MsG0780039657.01.T01:intron 30.0%
! ACAATTTTATGCATTTGTGG+AGG - Chr7:67302513-67302532 MsG0780039657.01.T01:CDS 30.0%
! ATGGAGTTGATTCTATGAAT+AGG - Chr7:67300105-67300124 MsG0780039657.01.T01:intron 30.0%
! ATTTTCGAATAAAATGGCCT+TGG - Chr7:67299683-67299702 MsG0780039657.01.T01:intron 30.0%
! CTTATGTTAATTTTCTTCCC+AGG - Chr7:67300400-67300419 MsG0780039657.01.T01:intron 30.0%
! TATCTGGTTATGTTTCTGTT+TGG - Chr7:67302078-67302097 MsG0780039657.01.T01:intron 30.0%
! TGTTTGTTAGTTCACAAGAT+TGG - Chr7:67299060-67299079 MsG0780039657.01.T01:intron 30.0%
! TTTTCACCTGTGTATTATCA+TGG - Chr7:67299764-67299783 MsG0780039657.01.T01:intron 30.0%
!! AAAAAAGAGTATTTAGGCAG+TGG + Chr7:67302552-67302571 None:intergenic 30.0%
!! ACAAACACATTAGCTTTATC+TGG + Chr7:67298994-67299013 None:intergenic 30.0%
!! CTATGGTGTTTTAAACAAGT+GGG + Chr7:67298379-67298398 None:intergenic 30.0%
!! GTAATTGTGGTTTTTCAAAG+TGG - Chr7:67298621-67298640 MsG0780039657.01.T01:intron 30.0%
!! TATGGTGTTTTAAACAAGTG+GGG + Chr7:67298378-67298397 None:intergenic 30.0%
!!! TGATCAATTTTTTCCAATGC+AGG + Chr7:67300617-67300636 None:intergenic 30.0%
AACAAAAAGAGCAATCACCT+AGG + Chr7:67297599-67297618 None:intergenic 35.0%
AACGCATAATGTCATCTTTC+AGG + Chr7:67301717-67301736 None:intergenic 35.0%
AACTAAGGGAAATGAGTTTG+AGG - Chr7:67300433-67300452 MsG0780039657.01.T01:intron 35.0%
AATATTGGATCTTGCGAAGA+AGG - Chr7:67301777-67301796 MsG0780039657.01.T01:intron 35.0%
AATTGGATACGCCGTTAATT+TGG - Chr7:67299737-67299756 MsG0780039657.01.T01:intron 35.0%
ACAAAAAGAGCAATCACCTA+GGG + Chr7:67297598-67297617 None:intergenic 35.0%
ACATTTAGCAGGCTTTCAAA+AGG + Chr7:67300357-67300376 None:intergenic 35.0%
ACCAAAAACACTTGCATTTC+GGG - Chr7:67300840-67300859 MsG0780039657.01.T01:intron 35.0%
AGAAGGAGTAGGAAATCTTA+TGG + Chr7:67299306-67299325 None:intergenic 35.0%
AGACCCTTAGTAAAATTCAG+GGG + Chr7:67301859-67301878 None:intergenic 35.0%
AGATTGCTTACAACCAAATC+GGG + Chr7:67298783-67298802 None:intergenic 35.0%
AGATTGTTCTATGCTTGTCA+TGG - Chr7:67301816-67301835 MsG0780039657.01.T01:intron 35.0%
AGGTAGACAAAATCGCAATT+TGG - Chr7:67298171-67298190 MsG0780039657.01.T01:CDS 35.0%
ATACTTACTCTTGGAGTCAA+TGG - Chr7:67299896-67299915 MsG0780039657.01.T01:intron 35.0%
ATATTGGATCTTGCGAAGAA+GGG - Chr7:67301778-67301797 MsG0780039657.01.T01:intron 35.0%
ATATTGGCAATTGCAGATCA+TGG + Chr7:67297846-67297865 None:intergenic 35.0%
ATCTATATAGCGTTCTGTAG+AGG - Chr7:67301976-67301995 MsG0780039657.01.T01:intron 35.0%
ATGTTGTGTTGTCTGATATC+TGG - Chr7:67302062-67302081 MsG0780039657.01.T01:intron 35.0%
ATTCTTGCTAGGGCTAAAAA+TGG - Chr7:67300563-67300582 MsG0780039657.01.T01:intron 35.0%
CAAAATTAACGGCTGAGATT+TGG - Chr7:67299862-67299881 MsG0780039657.01.T01:intron 35.0%
CAAGAACATGGAACAATTGA+TGG + Chr7:67301303-67301322 None:intergenic 35.0%
CAAGACCCTTAGTAAAATTC+AGG + Chr7:67301861-67301880 None:intergenic 35.0%
CCAAGATGATAACATTTAGC+AGG + Chr7:67300368-67300387 None:intergenic 35.0%
CCTGCTAAATGTTATCATCT+TGG - Chr7:67300365-67300384 MsG0780039657.01.T01:intron 35.0%
CTAATGGGAATATACGAGAA+GGG - Chr7:67300479-67300498 MsG0780039657.01.T01:intron 35.0%
GACCAAAAACACTTGCATTT+CGG - Chr7:67300839-67300858 MsG0780039657.01.T01:intron 35.0%
GAGTAGGAAATCTTATGGTA+GGG + Chr7:67299301-67299320 None:intergenic 35.0%
GCCGTATATCATTAACCTTA+TGG - Chr7:67302465-67302484 MsG0780039657.01.T01:CDS 35.0%
GGAATACTTTCTTCTTGGAT+AGG + Chr7:67300521-67300540 None:intergenic 35.0%
GGAGATTTCTGTATAGGTTA+TGG + Chr7:67299340-67299359 None:intergenic 35.0%
GGCTTGAATCAGAAATTAGT+GGG - Chr7:67298248-67298267 MsG0780039657.01.T01:CDS 35.0%
TAATGGGAATATACGAGAAG+GGG - Chr7:67300480-67300499 MsG0780039657.01.T01:intron 35.0%
TCGTCTAATAACTGAAAGCA+TGG + Chr7:67300179-67300198 None:intergenic 35.0%
TGCGCAACAAAATTGTGTTA+TGG - Chr7:67301356-67301375 MsG0780039657.01.T01:intron 35.0%
TGGCTTGAATCAGAAATTAG+TGG - Chr7:67298247-67298266 MsG0780039657.01.T01:CDS 35.0%
TGTTAGTTCACAAGATTGGA+AGG - Chr7:67299064-67299083 MsG0780039657.01.T01:intron 35.0%
TTGAAGTCCTTTACAGTAAC+AGG + Chr7:67302427-67302446 None:intergenic 35.0%
TTGCAGATCATGGAAAATAG+CGG + Chr7:67297836-67297855 None:intergenic 35.0%
TTTGTTTAGGAAGAAGGAGT+AGG - Chr7:67299788-67299807 MsG0780039657.01.T01:intron 35.0%
! AGAACAGGACACATCTTTTA+TGG - Chr7:67300086-67300105 MsG0780039657.01.T01:intron 35.0%
! ATGTTTCTGTTTGGTCTGAT+AGG - Chr7:67302087-67302106 MsG0780039657.01.T01:intron 35.0%
! ATTCAAGTTATGGTCACAAC+AGG - Chr7:67301682-67301701 MsG0780039657.01.T01:intron 35.0%
! CCACTTGTTTAAAACACCAT+AGG - Chr7:67298377-67298396 MsG0780039657.01.T01:CDS 35.0%
! CGTCTAATAACTGAAAGCAT+GGG + Chr7:67300178-67300197 None:intergenic 35.0%
! GAGTCATTGCAATCTAAGAT+AGG + Chr7:67298836-67298855 None:intergenic 35.0%
! GTATAGGTTATGGGTTGTTT+AGG + Chr7:67299330-67299349 None:intergenic 35.0%
! GTTCCCCTGAATTTTACTAA+GGG - Chr7:67301853-67301872 MsG0780039657.01.T01:intron 35.0%
! TCTTTGAGTTTGTACAGAAC+AGG - Chr7:67300071-67300090 MsG0780039657.01.T01:intron 35.0%
! TGTTCCCCTGAATTTTACTA+AGG - Chr7:67301852-67301871 MsG0780039657.01.T01:intron 35.0%
! TTATGGGTTGTTTAGGAAGA+AGG + Chr7:67299323-67299342 None:intergenic 35.0%
!! CCTATGGTGTTTTAAACAAG+TGG + Chr7:67298380-67298399 None:intergenic 35.0%
!! TAGGTGTTGATCTTTCTTTG+AGG + Chr7:67299365-67299384 None:intergenic 35.0%
!!! CATGGTTTTGTTTAGGAAGA+AGG - Chr7:67299782-67299801 MsG0780039657.01.T01:intron 35.0%
!!! GCAAGTGTTTTTGGTCAAAA+TGG + Chr7:67300835-67300854 None:intergenic 35.0%
AAAATGCTAACATGTGCCCT+AGG + Chr7:67301946-67301965 None:intergenic 40.0%
AAATGCTAACATGTGCCCTA+GGG + Chr7:67301945-67301964 None:intergenic 40.0%
AACCTAGAATACCATGCGAA+AGG - Chr7:67298410-67298429 MsG0780039657.01.T01:intron 40.0%
AACTACAAGTCCCTACCATA+AGG + Chr7:67299307-67299288 None:intergenic 40.0%
AAGAATGTCACTGCCAGTAA+GGG + Chr7:67300549-67300568 None:intergenic 40.0%
AGAAGGAGTAGGAAACCTTA+TGG - Chr7:67299799-67299818 MsG0780039657.01.T01:intron 40.0%
AGGGGTCACAGATTGTAAAT+TGG + Chr7:67298747-67298766 None:intergenic 40.0%
AGTATTCCAATTGCCCTTAC+TGG - Chr7:67300533-67300552 MsG0780039657.01.T01:intron 40.0%
ATGGATGAGCTTACTCTGAA+GGG - Chr7:67302484-67302503 MsG0780039657.01.T01:CDS 40.0%
ATGTGCTACATGTCAGATTG+TGG - Chr7:67300302-67300321 MsG0780039657.01.T01:intron 40.0%
ATTCAAGCCACTCACAAACA+CGG + Chr7:67298237-67298256 None:intergenic 40.0%
CAATCTATCTGCTTCCACTA+TGG - Chr7:67298797-67298816 MsG0780039657.01.T01:intron 40.0%
CACCTAACTTATATTCCCTC+CGG + Chr7:67301254-67301273 None:intergenic 40.0%
CATAATGTCATCTTTCAGGC+TGG + Chr7:67301713-67301732 None:intergenic 40.0%
CGCAAGATCCAATATTCTTC+CGG + Chr7:67301773-67301792 None:intergenic 40.0%
CTGTTTGGTCTGATAGGATA+AGG - Chr7:67302093-67302112 MsG0780039657.01.T01:intron 40.0%
GAATCAGAAATTAGTGGGAG+TGG - Chr7:67298253-67298272 MsG0780039657.01.T01:CDS 40.0%
GAGGACTTAAGATGAGAGTA+AGG - Chr7:67302038-67302057 MsG0780039657.01.T01:intron 40.0%
GAGGGAATATAAGTTAGGTG+AGG - Chr7:67301254-67301273 MsG0780039657.01.T01:intron 40.0%
GAGTAGGAAACCTTATGGTA+GGG - Chr7:67299804-67299823 MsG0780039657.01.T01:intron 40.0%
GATTGCTTACAACCAAATCG+GGG + Chr7:67298782-67298801 None:intergenic 40.0%
GCAAGATCCAATATTCTTCC+GGG + Chr7:67301772-67301791 None:intergenic 40.0%
GCTAATGGGAATATACGAGA+AGG - Chr7:67300478-67300497 MsG0780039657.01.T01:intron 40.0%
GGAGTAGGAAATCTTATGGT+AGG + Chr7:67299302-67299321 None:intergenic 40.0%
GGGGTCACAGATTGTAAATT+GGG + Chr7:67298746-67298765 None:intergenic 40.0%
GGGTCACAGATTGTAAATTG+GGG + Chr7:67298745-67298764 None:intergenic 40.0%
GTTGTTTAGGAAGAAGGAGT+AGG + Chr7:67299317-67299336 None:intergenic 40.0%
TATACGAGAAGGGGTTTGAA+AGG - Chr7:67300489-67300508 MsG0780039657.01.T01:intron 40.0%
TATGGATGAGCTTACTCTGA+AGG - Chr7:67302483-67302502 MsG0780039657.01.T01:CDS 40.0%
TCAGAGTAAGCTCATCCATA+AGG + Chr7:67302483-67302502 None:intergenic 40.0%
TCTCAAGTGTGTAAAGAGCT+TGG - Chr7:67301646-67301665 MsG0780039657.01.T01:intron 40.0%
TGAATCAGCTGCTCTATTGA+AGG + Chr7:67302358-67302377 None:intergenic 40.0%
TGCAGACATATGCATGTTGA+TGG - Chr7:67297891-67297910 MsG0780039657.01.T01:intron 40.0%
TGCATTTAGCATTCCTGCAT+TGG - Chr7:67300601-67300620 MsG0780039657.01.T01:intron 40.0%
TTACGCTGAGATGTGTTTCA+CGG - Chr7:67298340-67298359 MsG0780039657.01.T01:CDS 40.0%
TTCATATCCTCGCGTAAACA+AGG + Chr7:67300673-67300692 None:intergenic 40.0%
TTCTATGCTTGTCATGGATG+AGG - Chr7:67301822-67301841 MsG0780039657.01.T01:intron 40.0%
TTGCGAACCTTTAGTGCAAA+CGG + Chr7:67299654-67299673 None:intergenic 40.0%
TTTATGCATTTGTGGAGGAG+AGG - Chr7:67302518-67302537 MsG0780039657.01.T01:CDS 40.0%
! AACATTAGGATTTGACGGGT+TGG + Chr7:67302391-67302410 None:intergenic 40.0%
! AACTGAAAGCATGGGCTATA+GGG + Chr7:67300170-67300189 None:intergenic 40.0%
! AGTCTGAAACAAATGACCCT+AGG - Chr7:67297579-67297598 MsG0780039657.01.T01:CDS 40.0%
! GTCCTTAACATTTTCCCCTA+GGG - Chr7:67301927-67301946 MsG0780039657.01.T01:intron 40.0%
! TAACTGAAAGCATGGGCTAT+AGG + Chr7:67300171-67300190 None:intergenic 40.0%
!! ACATTAGGATTTGACGGGTT+GGG + Chr7:67302390-67302409 None:intergenic 40.0%
!! TGTTGATCTTTCTTTGAGGC+AGG + Chr7:67299361-67299380 None:intergenic 40.0%
AATGCTAACATGTGCCCTAG+GGG + Chr7:67301944-67301963 None:intergenic 45.0%
ACGGATCGTAAGATCCTATC+AGG + Chr7:67298713-67298732 None:intergenic 45.0%
AGAAATTAGTGGGAGTGGCT+GGG - Chr7:67298258-67298277 MsG0780039657.01.T01:CDS 45.0%
AGCCTTTCGCATGGTATTCT+AGG + Chr7:67298415-67298434 None:intergenic 45.0%
CAACCTGTTCATCTGCTAGT+TGG - Chr7:67301742-67301761 MsG0780039657.01.T01:intron 45.0%
CAAGAATGTCACTGCCAGTA+AGG + Chr7:67300550-67300569 None:intergenic 45.0%
CAAGTTATGGTCACAACAGG+TGG - Chr7:67301685-67301704 MsG0780039657.01.T01:intron 45.0%
CATAGCATTAACACGTGCGA+AGG + Chr7:67302230-67302249 None:intergenic 45.0%
CTATTGAAGGCTGGAACTCT+GGG + Chr7:67302345-67302364 None:intergenic 45.0%
CTTCGCACGTGTTAATGCTA+TGG - Chr7:67302228-67302247 MsG0780039657.01.T01:intron 45.0%
CTTTCTTCTTGGATAGGGGA+AGG + Chr7:67300515-67300534 None:intergenic 45.0%
GAAATGAGCGATTCTGCAGA+TGG - Chr7:67298309-67298328 MsG0780039657.01.T01:CDS 45.0%
GAGAAGTTTATCAGCCTGAG+AGG + Chr7:67302320-67302339 None:intergenic 45.0%
GAGGCAGGAGATTTCTGTAT+AGG + Chr7:67299346-67299365 None:intergenic 45.0%
GCAGAATCGCTCATTTCTAC+TGG + Chr7:67298306-67298325 None:intergenic 45.0%
GCTAGGGCTAAAAATGGAAC+AGG - Chr7:67300569-67300588 MsG0780039657.01.T01:intron 45.0%
GGAGTAGGAAACCTTATGGT+AGG - Chr7:67299803-67299822 MsG0780039657.01.T01:intron 45.0%
GTACCAACTAGCAGATGAAC+AGG + Chr7:67301748-67301767 None:intergenic 45.0%
TAAATTGGGGCAGCGTAACA+CGG + Chr7:67298732-67298751 None:intergenic 45.0%
TACGCTGAGATGTGTTTCAC+GGG - Chr7:67298341-67298360 MsG0780039657.01.T01:CDS 45.0%
TATTGAAGGCTGGAACTCTG+GGG + Chr7:67302344-67302363 None:intergenic 45.0%
TCTATTGAAGGCTGGAACTC+TGG + Chr7:67302346-67302365 None:intergenic 45.0%
TGATACACGCTATAGGACAG+AGG - Chr7:67299109-67299128 MsG0780039657.01.T01:intron 45.0%
TGCCCTAGGGGAAAATGTTA+AGG + Chr7:67301932-67301951 None:intergenic 45.0%
TGGCAGTGACATTCTTGCTA+GGG - Chr7:67300553-67300572 MsG0780039657.01.T01:intron 45.0%
TGGTACTCCCGGAAGAATAT+TGG - Chr7:67301762-67301781 MsG0780039657.01.T01:intron 45.0%
TTCACTTATATCACGCCGGA+GGG - Chr7:67301236-67301255 MsG0780039657.01.T01:intron 45.0%
TTGAAGCGTGAGCTGCTAAT+GGG - Chr7:67300464-67300483 MsG0780039657.01.T01:intron 45.0%
TTTCACTTATATCACGCCGG+AGG - Chr7:67301235-67301254 MsG0780039657.01.T01:intron 45.0%
! GCCCGAAATGCAAGTGTTTT+TGG + Chr7:67300844-67300863 None:intergenic 45.0%
! GGTCCTTAACATTTTCCCCT+AGG - Chr7:67301926-67301945 MsG0780039657.01.T01:intron 45.0%
! TTTGAAGCGTGAGCTGCTAA+TGG - Chr7:67300463-67300482 MsG0780039657.01.T01:intron 45.0%
!! ATTAGGATTTGACGGGTTGG+GGG + Chr7:67302388-67302407 None:intergenic 45.0%
!! CATTAGGATTTGACGGGTTG+GGG + Chr7:67302389-67302408 None:intergenic 45.0%
AACACGTGCGAAGGACACAA+AGG + Chr7:67302221-67302240 None:intergenic 50.0%
ACTCGTTCCAACACGAGAGT+TGG - Chr7:67301612-67301631 MsG0780039657.01.T01:intron 50.0%
CACCAGCTGATACACGCTAT+AGG - Chr7:67299102-67299121 MsG0780039657.01.T01:intron 50.0%
CAGAAATTAGTGGGAGTGGC+TGG - Chr7:67298257-67298276 MsG0780039657.01.T01:CDS 50.0%
CAGGACGTGACAGCAACTAA+GGG - Chr7:67300419-67300438 MsG0780039657.01.T01:intron 50.0%
CGCCGGAGGGAATATAAGTT+AGG - Chr7:67301249-67301268 MsG0780039657.01.T01:intron 50.0%
CTATAGCGTGTATCAGCTGG+TGG + Chr7:67299104-67299123 None:intergenic 50.0%
CTGAGATGTGTTTCACGGGT+CGG - Chr7:67298345-67298364 MsG0780039657.01.T01:CDS 50.0%
CTGGCAGTGACATTCTTGCT+AGG - Chr7:67300552-67300571 MsG0780039657.01.T01:intron 50.0%
CTTAGTTGCTGTCACGTCCT+GGG + Chr7:67300420-67300439 None:intergenic 50.0%
GAAAGTCGTAGCCTTTCGCA+TGG + Chr7:67298424-67298443 None:intergenic 50.0%
GTCCTATAGCGTGTATCAGC+TGG + Chr7:67299107-67299126 None:intergenic 50.0%
TCACTGCCAGTAAGGGCAAT+TGG + Chr7:67300542-67300561 None:intergenic 50.0%
TCAGCTGCTCTATTGAAGGC+TGG + Chr7:67302354-67302373 None:intergenic 50.0%
TCCTCGCGTAAACAAGGAGA+AGG + Chr7:67300667-67300686 None:intergenic 50.0%
TGAGATGTGTTTCACGGGTC+GGG - Chr7:67298346-67298365 MsG0780039657.01.T01:CDS 50.0%
! CATCTGCTAGTTGGTACTCC+CGG - Chr7:67301751-67301770 MsG0780039657.01.T01:intron 50.0%
! TCCTTCTCCTTGTTTACGCG+AGG - Chr7:67300663-67300682 MsG0780039657.01.T01:intron 50.0%
! TGCTATAGTGCTGCTACAGC+TGG + Chr7:67297787-67297806 None:intergenic 50.0%
!! GAGTGCTGACAACAAGCAGT+AGG + Chr7:67300746-67300765 None:intergenic 50.0%
AACCAAATCGGGGCAGGATC+GGG + Chr7:67298772-67298791 None:intergenic 55.0%
AGCAACAACAGTGGCTGAGG+AGG - Chr7:67297498-67297517 MsG0780039657.01.T01:CDS 55.0%
AGCAGCAACAACAGTGGCTG+AGG - Chr7:67297495-67297514 MsG0780039657.01.T01:CDS 55.0%
AGCAGCAGCAGCAACAACAG+TGG - Chr7:67297489-67297508 MsG0780039657.01.T01:CDS 55.0%
AGCCACTCACAAACACGGCA+AGG + Chr7:67298232-67298251 None:intergenic 55.0%
CAACCAAATCGGGGCAGGAT+CGG + Chr7:67298773-67298792 None:intergenic 55.0%
CCAGGACGTGACAGCAACTA+AGG - Chr7:67300418-67300437 MsG0780039657.01.T01:intron 55.0%
CCTTAGTTGCTGTCACGTCC+TGG + Chr7:67300421-67300440 None:intergenic 55.0%
CTCAACCTCCTCGACGACAT+TGG + Chr7:67297549-67297568 None:intergenic 55.0%
CTCCTCGACGACATTGGTGT+CGG + Chr7:67297543-67297562 None:intergenic 55.0%
GCCACTCACAAACACGGCAA+GGG + Chr7:67298231-67298250 None:intergenic 55.0%
GCTTACAACCAAATCGGGGC+AGG + Chr7:67298778-67298797 None:intergenic 55.0%
TACCGACACCAATGTCGTCG+AGG - Chr7:67297538-67297557 MsG0780039657.01.T01:CDS 55.0%
TCCCTTGCCGTGTTTGTGAG+TGG - Chr7:67298227-67298246 MsG0780039657.01.T01:CDS 55.0%
TGCAGAGCCAACTCTCGTGT+TGG + Chr7:67301622-67301641 None:intergenic 55.0%
TGGCTGAGGAGGAACCAGTT+GGG - Chr7:67297509-67297528 MsG0780039657.01.T01:CDS 55.0%
ACCAAATCGGGGCAGGATCG+GGG + Chr7:67298771-67298790 None:intergenic 60.0%
AGGAGGAACCAGTTGGGTGG+TGG - Chr7:67297515-67297534 MsG0780039657.01.T01:CDS 60.0%
CGACACCAATGTCGTCGAGG+AGG - Chr7:67297541-67297560 MsG0780039657.01.T01:CDS 60.0%
CTGAGGAGGAACCAGTTGGG+TGG - Chr7:67297512-67297531 MsG0780039657.01.T01:CDS 60.0%
GTGGCTGAGGAGGAACCAGT+TGG - Chr7:67297508-67297527 MsG0780039657.01.T01:CDS 60.0%
TGTCGGTACCACCACCCAAC+TGG + Chr7:67297526-67297545 None:intergenic 60.0%
AATCGGGGCAGGATCGGGGT+AGG + Chr7:67298767-67298786 None:intergenic 65.0%
ACCCCGATCCTGCCCCGATT+TGG - Chr7:67298767-67298786 MsG0780039657.01.T01:intron 65.0%
ATCGGGGCAGGATCGGGGTA+GGG + Chr7:67298766-67298785 None:intergenic 65.0%
TCGGGGCAGGATCGGGGTAG+GGG + Chr7:67298765-67298784 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 67297407 67302606 67297407 ID=MsG0780039657.01;Name=MsG0780039657.01
Chr7 mRNA 67297407 67302606 67297407 ID=MsG0780039657.01.T01;Parent=MsG0780039657.01;Name=MsG0780039657.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0|1|0.75|0.8|5|0|336
Chr7 exon 67302413 67302606 67302413 ID=MsG0780039657.01.T01:exon:13851;Parent=MsG0780039657.01.T01
Chr7 exon 67300883 67300943 67300883 ID=MsG0780039657.01.T01:exon:13850;Parent=MsG0780039657.01.T01
Chr7 exon 67299357 67299591 67299357 ID=MsG0780039657.01.T01:exon:13849;Parent=MsG0780039657.01.T01
Chr7 exon 67298170 67298408 67298170 ID=MsG0780039657.01.T01:exon:13848;Parent=MsG0780039657.01.T01
Chr7 exon 67297407 67297688 67297407 ID=MsG0780039657.01.T01:exon:13847;Parent=MsG0780039657.01.T01
Chr7 CDS 67302413 67302606 67302413 ID=MsG0780039657.01.T01:cds;Parent=MsG0780039657.01.T01
Chr7 CDS 67300883 67300943 67300883 ID=MsG0780039657.01.T01:cds;Parent=MsG0780039657.01.T01
Chr7 CDS 67299357 67299591 67299357 ID=MsG0780039657.01.T01:cds;Parent=MsG0780039657.01.T01
Chr7 CDS 67298170 67298408 67298170 ID=MsG0780039657.01.T01:cds;Parent=MsG0780039657.01.T01
Chr7 CDS 67297407 67297688 67297407 ID=MsG0780039657.01.T01:cds;Parent=MsG0780039657.01.T01
Gene Sequence

>MsG0780039657.01.T01

ATGATGCAAAATCAGAATCAGCATCAGCAACACTATCAGCATCATCAACAGAATCAACAACACTATCAGCAGCAGAGTCAACAGCAGCAGCAGCAACAACAGTGGCTGAGGAGGAACCAGTTGGGTGGTGGTACCGACACCAATGTCGTCGAGGAGGTTGAGAAGACTGTACAGTCTGAAACAAATGACCCTAGTTCACAAGATTGGAAGGCAAAACTAAAGCTTCCACCAGCTGATACACGCTATAGGACAGAGGACGTGACAGCAACTAAGGGAAATGAGTTTGAGGATTACTTTTTGAAGCGTGAGCTGCTAATGGGAATATACGAGAAGGGGTTTGAAAGGCCTTCCCCTATCCAAGAAGAAAGTATTCCAATTGCCCTTACTGGCAGTGACATTCTTGCTAGGGCTAAAAATGGAACAGGCAAAACAGCTGCATTTAGCATTCCTGCATTGGAAAAAATTGATCAAGATAACAATATTATTCAAGTTGTTATACTCGTTCCAACACGAGAGTTGGCTCTGCAAACATCTCAAGTGTGTAAAGAGCTTGGAAAGCATTTACAAATTCAAGTTATGGTCACAACAGGTGGTACCAGCCTGAAAGATGACATTATGCGTTTATATCAACCTGTTCATCTGCTAGTTGGTACTCCCGGAAGAATATTGGATCTTGCGAAGAAGGGTGTCTGTGTTCTGAAAGATTGTTCTATGCTTGTCATGGATGAGGCTGATAAACTTCTCTCCCCAGAGTTCCAGCCTTCAATAGAGCAGCTGATTCAATTTCTTCCCCCAACCCGTCAAATCCTAATGTTTTCAGCTACATTTCCTGTTACTGTAAAGGACTTCAAAGATAGATATCTTCGTAAGCCGTATATCATTAACCTTATGGATGAGCTTACTCTGAAGGGTATTACACAATTTTATGCATTTGTGGAGGAGAGGCAGAAAGTCCACTGCCTAAATACTCTTTTTTCTAAGGTATGTGATGTCCATGCCAAGATATTGTAG

Protein sequence

>MsG0780039657.01.T01

MMQNQNQHQQHYQHHQQNQQHYQQQSQQQQQQQQWLRRNQLGGGTDTNVVEEVEKTVQSETNDPSSQDWKAKLKLPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPTRQILMFSATFPVTVKDFKDRYLRKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKVCDVHAKIL*