Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380011504.01.T01 | XP_003598036.1 | 97.983 | 694 | 14 | 0 | 1 | 694 | 1 | 694 | 0 | 1415 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380011504.01.T01 | Q0WVN5 | 35.185 | 702 | 394 | 13 | 19 | 687 | 46 | 719 | 5.23E-145 | 444 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380011504.01.T01 | G7IYF6 | 97.983 | 694 | 14 | 0 | 1 | 694 | 1 | 694 | 0.0 | 1415 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0280006428.01 | MsG0380011504.01 | 0.855200 | 7.401909e-62 | 1.695151e-58 |
MsG0280006429.01 | MsG0380011504.01 | 0.834065 | 3.716941e-56 | 4.361771e-53 |
MsG0380011504.01 | MsG0480018092.01 | 0.827514 | 1.500469e-54 | 1.451689e-51 |
MsG0380011504.01 | MsG0480018093.01 | 0.834399 | 3.065484e-56 | 3.633683e-53 |
MsG0380011504.01 | MsG0480019426.01 | 0.830146 | 3.461255e-55 | 3.616209e-52 |
MsG0380011504.01 | MsG0880046955.01 | 0.820165 | 7.923575e-53 | 6.222531e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380011504.01.T01 | MTR_3g005560 | 97.983 | 694 | 14 | 0 | 1 | 694 | 1 | 694 | 0.0 | 1415 |
MsG0380011504.01.T01 | MTR_2g037830 | 74.784 | 694 | 173 | 1 | 1 | 694 | 1 | 692 | 0.0 | 1110 |
MsG0380011504.01.T01 | MTR_3g005560 | 97.955 | 538 | 11 | 0 | 1 | 538 | 1 | 538 | 0.0 | 1102 |
MsG0380011504.01.T01 | MTR_0011s0020 | 72.190 | 694 | 191 | 1 | 1 | 694 | 1 | 692 | 0.0 | 1073 |
MsG0380011504.01.T01 | MTR_3g450800 | 75.077 | 646 | 158 | 2 | 49 | 694 | 1 | 643 | 0.0 | 1038 |
MsG0380011504.01.T01 | MTR_3g005560 | 97.862 | 421 | 9 | 0 | 1 | 421 | 1 | 421 | 0.0 | 864 |
MsG0380011504.01.T01 | MTR_2g037830 | 79.493 | 473 | 97 | 0 | 1 | 473 | 1 | 473 | 0.0 | 805 |
MsG0380011504.01.T01 | MTR_4g088225 | 41.977 | 698 | 380 | 7 | 15 | 692 | 20 | 712 | 0.0 | 590 |
MsG0380011504.01.T01 | MTR_4g088225 | 41.977 | 698 | 380 | 7 | 15 | 692 | 20 | 712 | 0.0 | 590 |
MsG0380011504.01.T01 | MTR_1g073740 | 40.825 | 703 | 385 | 9 | 12 | 692 | 18 | 711 | 0.0 | 585 |
MsG0380011504.01.T01 | MTR_3g060220 | 35.007 | 677 | 388 | 12 | 46 | 692 | 52 | 706 | 4.90e-134 | 412 |
MsG0380011504.01.T01 | MTR_3g060220 | 34.956 | 678 | 388 | 12 | 46 | 692 | 52 | 707 | 6.87e-134 | 412 |
MsG0380011504.01.T01 | MTR_3g060240 | 33.774 | 681 | 397 | 11 | 46 | 693 | 52 | 711 | 2.72e-130 | 402 |
MsG0380011504.01.T01 | MTR_3g060280 | 32.630 | 711 | 404 | 14 | 26 | 690 | 31 | 712 | 9.79e-127 | 394 |
MsG0380011504.01.T01 | MTR_8g063270 | 30.956 | 743 | 436 | 15 | 20 | 693 | 1 | 735 | 2.17e-114 | 362 |
MsG0380011504.01.T01 | MTR_8g063270 | 30.780 | 744 | 438 | 15 | 19 | 693 | 205 | 940 | 6.74e-113 | 363 |
MsG0380011504.01.T01 | MTR_4g130510 | 28.402 | 757 | 450 | 15 | 19 | 693 | 251 | 997 | 9.21e-108 | 351 |
MsG0380011504.01.T01 | MTR_1g069605 | 28.723 | 752 | 448 | 15 | 19 | 693 | 111 | 851 | 4.33e-106 | 343 |
MsG0380011504.01.T01 | MTR_8g086600 | 28.609 | 769 | 455 | 14 | 11 | 693 | 188 | 948 | 1.11e-105 | 344 |
MsG0380011504.01.T01 | MTR_3g107520 | 28.846 | 780 | 435 | 19 | 19 | 693 | 281 | 1045 | 5.13e-105 | 344 |
MsG0380011504.01.T01 | MTR_2g087960 | 31.045 | 641 | 404 | 11 | 34 | 643 | 40 | 673 | 1.49e-104 | 335 |
MsG0380011504.01.T01 | MTR_4g050000 | 30.365 | 685 | 426 | 17 | 37 | 686 | 42 | 710 | 2.21e-104 | 335 |
MsG0380011504.01.T01 | MTR_3g060280 | 35.199 | 554 | 293 | 10 | 26 | 539 | 31 | 558 | 3.58e-104 | 330 |
MsG0380011504.01.T01 | MTR_3g060280 | 34.901 | 553 | 294 | 10 | 26 | 538 | 31 | 557 | 2.22e-103 | 328 |
MsG0380011504.01.T01 | MTR_2g087980 | 30.917 | 676 | 438 | 12 | 35 | 686 | 37 | 707 | 2.24e-102 | 330 |
MsG0380011504.01.T01 | MTR_2g016630 | 27.865 | 768 | 449 | 14 | 19 | 693 | 181 | 936 | 7.92e-102 | 334 |
MsG0380011504.01.T01 | MTR_2g087900 | 30.747 | 683 | 410 | 18 | 51 | 686 | 56 | 722 | 1.53e-101 | 328 |
MsG0380011504.01.T01 | MTR_4g130510 | 27.181 | 791 | 450 | 16 | 19 | 693 | 251 | 1031 | 2.93e-101 | 334 |
MsG0380011504.01.T01 | MTR_2g087950 | 30.678 | 678 | 427 | 14 | 37 | 686 | 42 | 704 | 4.20e-101 | 327 |
MsG0380011504.01.T01 | MTR_3g007770 | 27.913 | 781 | 447 | 17 | 19 | 693 | 238 | 1008 | 5.51e-95 | 317 |
MsG0380011504.01.T01 | MTR_4g130510 | 30.244 | 615 | 341 | 11 | 19 | 554 | 251 | 856 | 5.89e-95 | 313 |
MsG0380011504.01.T01 | MTR_2g087960 | 32.156 | 538 | 330 | 9 | 31 | 538 | 37 | 569 | 7.99e-95 | 305 |
MsG0380011504.01.T01 | MTR_2g087900 | 32.955 | 528 | 302 | 10 | 51 | 537 | 56 | 572 | 2.34e-91 | 296 |
MsG0380011504.01.T01 | MTR_1g039445 | 25.183 | 818 | 456 | 17 | 19 | 693 | 261 | 1065 | 1.20e-77 | 270 |
MsG0380011504.01.T01 | MTR_3g060280 | 35.045 | 448 | 222 | 11 | 26 | 430 | 31 | 452 | 2.86e-77 | 255 |
MsG0380011504.01.T01 | MTR_1g039480 | 24.760 | 832 | 456 | 16 | 19 | 693 | 275 | 1093 | 5.20e-77 | 268 |
MsG0380011504.01.T01 | MTR_7g106680 | 35.695 | 367 | 204 | 6 | 19 | 353 | 229 | 595 | 2.11e-74 | 259 |
MsG0380011504.01.T01 | MTR_7g106680 | 27.385 | 325 | 224 | 6 | 372 | 692 | 674 | 990 | 4.13e-37 | 149 |
MsG0380011504.01.T01 | MTR_2g087900 | 34.033 | 429 | 231 | 10 | 51 | 439 | 56 | 472 | 5.77e-74 | 247 |
MsG0380011504.01.T01 | MTR_4g130510 | 30.000 | 480 | 258 | 7 | 19 | 422 | 251 | 728 | 1.31e-68 | 239 |
MsG0380011504.01.T01 | MTR_3g030040 | 34.332 | 367 | 209 | 6 | 19 | 353 | 271 | 637 | 2.79e-68 | 243 |
MsG0380011504.01.T01 | MTR_3g030040 | 27.356 | 329 | 227 | 6 | 369 | 693 | 717 | 1037 | 2.32e-38 | 153 |
MsG0380011504.01.T01 | MTR_8g092590 | 34.574 | 376 | 213 | 8 | 19 | 361 | 289 | 664 | 1.09e-66 | 238 |
MsG0380011504.01.T01 | MTR_8g092590 | 27.988 | 343 | 232 | 8 | 356 | 692 | 721 | 1054 | 2.96e-38 | 153 |
MsG0380011504.01.T01 | MTR_1g098550 | 35.372 | 376 | 210 | 7 | 19 | 361 | 287 | 662 | 1.10e-66 | 238 |
MsG0380011504.01.T01 | MTR_1g098550 | 28.319 | 339 | 204 | 8 | 366 | 687 | 730 | 1046 | 1.03e-32 | 135 |
MsG0380011504.01.T01 | MTR_1g098550 | 35.372 | 376 | 210 | 7 | 19 | 361 | 291 | 666 | 1.22e-66 | 238 |
MsG0380011504.01.T01 | MTR_1g098550 | 28.319 | 339 | 204 | 8 | 366 | 687 | 734 | 1050 | 1.05e-32 | 135 |
MsG0380011504.01.T01 | MTR_8g037260 | 33.423 | 371 | 194 | 6 | 30 | 358 | 283 | 642 | 9.54e-66 | 235 |
MsG0380011504.01.T01 | MTR_8g037260 | 27.492 | 331 | 228 | 6 | 367 | 693 | 715 | 1037 | 6.20e-40 | 158 |
MsG0380011504.01.T01 | MTR_2g035780 | 33.515 | 367 | 212 | 6 | 19 | 353 | 222 | 588 | 2.14e-65 | 234 |
MsG0380011504.01.T01 | MTR_2g035780 | 26.748 | 329 | 228 | 7 | 369 | 693 | 684 | 1003 | 4.04e-35 | 143 |
MsG0380011504.01.T01 | MTR_2g087900 | 37.162 | 296 | 153 | 5 | 51 | 321 | 56 | 343 | 2.73e-63 | 214 |
MsG0380011504.01.T01 | MTR_7g116230 | 28.305 | 537 | 277 | 10 | 19 | 448 | 145 | 680 | 1.11e-61 | 222 |
MsG0380011504.01.T01 | MTR_5g029190 | 24.618 | 524 | 330 | 9 | 229 | 693 | 566 | 1083 | 4.66e-51 | 192 |
MsG0380011504.01.T01 | MTR_5g029190 | 33.990 | 203 | 118 | 5 | 27 | 216 | 277 | 476 | 2.68e-27 | 119 |
MsG0380011504.01.T01 | MTR_4g077910 | 25.688 | 545 | 326 | 10 | 215 | 693 | 573 | 1104 | 7.64e-51 | 191 |
MsG0380011504.01.T01 | MTR_4g077910 | 32.864 | 213 | 124 | 6 | 19 | 216 | 289 | 497 | 1.21e-27 | 120 |
MsG0380011504.01.T01 | MTR_2g438220 | 25.763 | 524 | 317 | 14 | 229 | 692 | 474 | 985 | 1.91e-50 | 190 |
MsG0380011504.01.T01 | MTR_2g438220 | 30.303 | 198 | 124 | 3 | 19 | 202 | 175 | 372 | 1.31e-26 | 116 |
MsG0380011504.01.T01 | MTR_7g109200 | 25.532 | 564 | 330 | 14 | 200 | 692 | 587 | 1131 | 6.22e-47 | 180 |
MsG0380011504.01.T01 | MTR_7g109200 | 34.337 | 166 | 95 | 3 | 19 | 170 | 313 | 478 | 3.92e-24 | 108 |
MsG0380011504.01.T01 | MTR_3g091270 | 26.366 | 421 | 216 | 10 | 86 | 443 | 107 | 496 | 6.76e-40 | 154 |
MsG0380011504.01.T01 | MTR_2g087900 | 37.423 | 163 | 91 | 3 | 51 | 210 | 56 | 210 | 8.23e-31 | 122 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380011504.01.T01 | AT4G23990 | 35.185 | 702 | 394 | 13 | 19 | 687 | 46 | 719 | 5.34e-146 | 444 |
MsG0380011504.01.T01 | AT4G24010 | 34.621 | 699 | 408 | 13 | 19 | 690 | 27 | 703 | 5.44e-146 | 444 |
MsG0380011504.01.T01 | AT4G24000 | 34.527 | 698 | 397 | 12 | 19 | 687 | 24 | 690 | 8.76e-146 | 442 |
MsG0380011504.01.T01 | AT1G55850 | 33.050 | 705 | 396 | 14 | 26 | 693 | 40 | 705 | 3.67e-125 | 389 |
MsG0380011504.01.T01 | AT5G17420 | 28.722 | 759 | 446 | 16 | 19 | 693 | 238 | 985 | 4.14e-111 | 360 |
MsG0380011504.01.T01 | AT4G18780 | 28.923 | 771 | 440 | 14 | 19 | 693 | 184 | 942 | 1.75e-107 | 349 |
MsG0380011504.01.T01 | AT5G09870 | 29.086 | 777 | 435 | 20 | 19 | 692 | 264 | 1027 | 3.01e-105 | 345 |
MsG0380011504.01.T01 | AT4G24000 | 35.368 | 475 | 284 | 6 | 216 | 687 | 44 | 498 | 2.95e-104 | 328 |
MsG0380011504.01.T01 | AT5G64740 | 29.487 | 780 | 431 | 21 | 19 | 692 | 276 | 1042 | 4.81e-104 | 342 |
MsG0380011504.01.T01 | AT2G32530 | 32.741 | 675 | 379 | 21 | 32 | 651 | 36 | 690 | 6.84e-103 | 331 |
MsG0380011504.01.T01 | AT2G21770 | 27.756 | 771 | 453 | 16 | 19 | 692 | 282 | 1045 | 9.83e-103 | 338 |
MsG0380011504.01.T01 | AT2G25540 | 27.167 | 773 | 457 | 16 | 19 | 693 | 255 | 1019 | 1.74e-102 | 337 |
MsG0380011504.01.T01 | AT4G23990 | 35.477 | 482 | 281 | 7 | 216 | 687 | 44 | 505 | 1.39e-101 | 322 |
MsG0380011504.01.T01 | AT2G32540 | 31.763 | 658 | 383 | 17 | 46 | 653 | 51 | 692 | 3.47e-98 | 319 |
MsG0380011504.01.T01 | AT4G15320 | 31.965 | 682 | 384 | 20 | 32 | 656 | 36 | 694 | 1.25e-97 | 317 |
MsG0380011504.01.T01 | AT4G15320 | 31.965 | 682 | 384 | 20 | 32 | 656 | 36 | 694 | 1.26e-97 | 317 |
MsG0380011504.01.T01 | AT2G32620 | 32.496 | 677 | 377 | 21 | 35 | 655 | 43 | 695 | 2.51e-96 | 314 |
MsG0380011504.01.T01 | AT4G15320 | 30.919 | 718 | 403 | 22 | 7 | 656 | 17 | 709 | 9.76e-95 | 310 |
MsG0380011504.01.T01 | AT4G15290 | 30.909 | 660 | 390 | 17 | 46 | 656 | 51 | 693 | 1.51e-94 | 309 |
MsG0380011504.01.T01 | AT2G32610 | 30.945 | 656 | 375 | 17 | 46 | 645 | 51 | 684 | 6.62e-92 | 302 |
MsG0380011504.01.T01 | AT2G32620 | 34.862 | 545 | 292 | 16 | 35 | 537 | 43 | 566 | 1.55e-90 | 295 |
MsG0380011504.01.T01 | AT2G32620 | 32.848 | 618 | 343 | 18 | 91 | 655 | 1 | 599 | 2.73e-89 | 293 |
MsG0380011504.01.T01 | AT2G32620 | 36.025 | 483 | 248 | 14 | 35 | 476 | 43 | 505 | 7.65e-86 | 280 |
MsG0380011504.01.T01 | AT4G15320 | 29.808 | 728 | 376 | 22 | 7 | 642 | 17 | 701 | 3.95e-82 | 277 |
MsG0380011504.01.T01 | AT4G38190 | 25.542 | 830 | 457 | 18 | 12 | 693 | 252 | 1068 | 8.59e-81 | 278 |
MsG0380011504.01.T01 | AT2G33100 | 24.787 | 823 | 464 | 16 | 19 | 692 | 183 | 999 | 3.20e-80 | 276 |
MsG0380011504.01.T01 | AT2G33100 | 24.787 | 823 | 464 | 16 | 19 | 692 | 183 | 999 | 3.20e-80 | 276 |
MsG0380011504.01.T01 | AT4G15320 | 28.031 | 767 | 382 | 24 | 7 | 642 | 17 | 744 | 8.44e-76 | 260 |
MsG0380011504.01.T01 | AT5G05170 | 34.060 | 367 | 210 | 4 | 19 | 353 | 259 | 625 | 8.16e-68 | 241 |
MsG0380011504.01.T01 | AT5G05170 | 26.536 | 358 | 242 | 8 | 340 | 693 | 684 | 1024 | 1.63e-37 | 150 |
MsG0380011504.01.T01 | AT5G44030 | 34.239 | 368 | 208 | 8 | 19 | 353 | 215 | 581 | 5.60e-66 | 236 |
MsG0380011504.01.T01 | AT5G44030 | 26.957 | 345 | 220 | 10 | 365 | 693 | 680 | 1008 | 1.28e-31 | 132 |
MsG0380011504.01.T01 | AT5G44030 | 34.239 | 368 | 208 | 8 | 19 | 353 | 244 | 610 | 6.94e-66 | 236 |
MsG0380011504.01.T01 | AT5G44030 | 26.957 | 345 | 220 | 10 | 365 | 693 | 709 | 1037 | 1.43e-31 | 132 |
MsG0380011504.01.T01 | AT4G39350 | 34.605 | 367 | 208 | 8 | 19 | 353 | 277 | 643 | 1.66e-64 | 232 |
MsG0380011504.01.T01 | AT4G39350 | 26.946 | 334 | 225 | 6 | 366 | 692 | 720 | 1041 | 3.00e-35 | 144 |
MsG0380011504.01.T01 | AT4G32410 | 32.454 | 379 | 224 | 5 | 19 | 365 | 275 | 653 | 7.18e-64 | 230 |
MsG0380011504.01.T01 | AT4G32410 | 27.660 | 329 | 226 | 6 | 369 | 693 | 719 | 1039 | 5.33e-37 | 149 |
MsG0380011504.01.T01 | AT5G44030 | 37.000 | 300 | 164 | 5 | 78 | 353 | 4 | 302 | 1.90e-59 | 214 |
MsG0380011504.01.T01 | AT5G44030 | 26.957 | 345 | 220 | 10 | 365 | 693 | 401 | 729 | 7.66e-32 | 132 |
MsG0380011504.01.T01 | AT5G16910 | 25.933 | 536 | 321 | 10 | 221 | 693 | 585 | 1107 | 2.23e-52 | 196 |
MsG0380011504.01.T01 | AT5G16910 | 28.980 | 245 | 147 | 5 | 19 | 237 | 297 | 540 | 1.27e-26 | 117 |
MsG0380011504.01.T01 | AT3G03050 | 25.417 | 539 | 323 | 10 | 221 | 693 | 582 | 1107 | 8.57e-51 | 191 |
MsG0380011504.01.T01 | AT3G03050 | 31.429 | 245 | 141 | 7 | 19 | 237 | 294 | 537 | 2.35e-27 | 119 |
MsG0380011504.01.T01 | AT1G02730 | 24.275 | 552 | 332 | 10 | 215 | 692 | 604 | 1143 | 1.92e-47 | 181 |
MsG0380011504.01.T01 | AT1G02730 | 33.735 | 166 | 96 | 3 | 19 | 170 | 318 | 483 | 3.41e-24 | 109 |
MsG0380011504.01.T01 | AT1G32180 | 23.033 | 521 | 342 | 8 | 229 | 693 | 427 | 944 | 5.26e-47 | 179 |
MsG0380011504.01.T01 | AT1G32180 | 32.719 | 217 | 127 | 4 | 15 | 216 | 118 | 330 | 1.08e-28 | 123 |
MsG0380011504.01.T01 | AT1G32180 | 23.033 | 521 | 342 | 8 | 229 | 693 | 427 | 944 | 5.26e-47 | 179 |
MsG0380011504.01.T01 | AT1G32180 | 32.719 | 217 | 127 | 4 | 15 | 216 | 118 | 330 | 1.08e-28 | 123 |
Find 139 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTATTGGATTCATACTTTA+TGG | 0.096303 | 3:-612895 | MsG0380011504.01.T01:CDS |
TTTGCTTCTTTGGTGGTTTA+TGG | 0.144769 | 3:-611907 | MsG0380011504.01.T01:CDS |
GCAATATATTTAGAGGTTTC+TGG | 0.151089 | 3:+615282 | None:intergenic |
TTGAGAGGTCCGGGTCTTTC+TGG | 0.163686 | 3:-615037 | MsG0380011504.01.T01:CDS |
AATAGAAGTGCATTATTATT+TGG | 0.173018 | 3:-614998 | MsG0380011504.01.T01:CDS |
TAAACAACACGTGGAATTTC+TGG | 0.175283 | 3:+615577 | None:intergenic |
AATTAGACTACACCACTTAT+TGG | 0.177128 | 3:+611620 | None:intergenic |
GTGAACACTATTTGCTTCTT+TGG | 0.183474 | 3:-611917 | MsG0380011504.01.T01:CDS |
ACAATGGAGATTTCAGTTTA+AGG | 0.195756 | 3:+611700 | None:intergenic |
CTTGAAAATCCATAAGTAAA+AGG | 0.205743 | 3:+612973 | None:intergenic |
CATTTGATAGAGGTCATTTC+TGG | 0.217342 | 3:-612178 | MsG0380011504.01.T01:CDS |
GAAAATAAAATACCTTAATT+TGG | 0.244052 | 3:+616403 | None:intergenic |
TTCACTACAAAAGTTGTATA+TGG | 0.253887 | 3:+617011 | None:intergenic |
ACAGGTTAAGTACGTGAAAA+TGG | 0.260720 | 3:-616087 | MsG0380011504.01.T01:intron |
CTACTCAATTTGCTAAAGTT+TGG | 0.265706 | 3:-616539 | MsG0380011504.01.T01:CDS |
AACAAATGCAATATATTTAG+AGG | 0.277003 | 3:+615275 | None:intergenic |
TATGAATCCAATAGCATATA+TGG | 0.280573 | 3:+612903 | None:intergenic |
GGTGGGATGAACAAAGAATT+TGG | 0.291492 | 3:-612135 | MsG0380011504.01.T01:CDS |
TATAAACTTGATTTGGTCAT+TGG | 0.303751 | 3:-611590 | MsG0380011504.01.T01:three_prime_UTR |
TAGACTCCCCAAAGTAGTTT+TGG | 0.305921 | 3:+613838 | None:intergenic |
ATTTCATCCATATATGCTAT+TGG | 0.307281 | 3:-612910 | MsG0380011504.01.T01:CDS |
AAAGAAACACATGGCTTGTT+TGG | 0.307493 | 3:+615311 | None:intergenic |
TATATATATAGTACACTAAT+TGG | 0.309927 | 3:+617069 | None:intergenic |
TTGATGCCCAAAACTACTTT+GGG | 0.310084 | 3:-613845 | MsG0380011504.01.T01:CDS |
TTTGGAAGTCCAATTCAAAA+AGG | 0.311049 | 3:-614980 | MsG0380011504.01.T01:intron |
TCTATTTATCTTTCTGATGA+TGG | 0.311528 | 3:-616597 | MsG0380011504.01.T01:CDS |
TAAATAGAAAGCTTATTAGA+AGG | 0.312123 | 3:+616612 | None:intergenic |
CTTGATGCCCAAAACTACTT+TGG | 0.340496 | 3:-613846 | MsG0380011504.01.T01:CDS |
TACTCAATTTGCTAAAGTTT+GGG | 0.342067 | 3:-616538 | MsG0380011504.01.T01:CDS |
CGGACAATACATAACTATAT+TGG | 0.344807 | 3:-611485 | MsG0380011504.01.T01:three_prime_UTR |
GTTAGATTATAAACTTGATT+TGG | 0.350789 | 3:-611597 | MsG0380011504.01.T01:three_prime_UTR |
AATATGTGAAGTCTACTTAG+AGG | 0.355811 | 3:+616921 | None:intergenic |
GGCAGAGAGAGACCAAATTA+AGG | 0.387047 | 3:-616415 | MsG0380011504.01.T01:intron |
CTGAGGATGAACATGTTCTT+AGG | 0.393077 | 3:-616452 | MsG0380011504.01.T01:CDS |
TCAGTTTAAGGTACAAATAG+TGG | 0.410195 | 3:+611712 | None:intergenic |
TACTTAGAGGTAACCATGAT+TGG | 0.413032 | 3:+616934 | None:intergenic |
CAAAGAAGGCATGCTTCAAT+TGG | 0.430014 | 3:-613043 | MsG0380011504.01.T01:CDS |
TGTTGTTTCTGCTATTGCTA+TGG | 0.430946 | 3:-616640 | MsG0380011504.01.T01:CDS |
ATAGAGGTCATTTCTGGTGA+TGG | 0.431524 | 3:-612172 | MsG0380011504.01.T01:CDS |
TGGTTGTAGCTAAGAGTCTC+AGG | 0.432047 | 3:-615402 | MsG0380011504.01.T01:intron |
TTTCCTGGTTAGCTATGTAA+TGG | 0.435646 | 3:-611840 | MsG0380011504.01.T01:CDS |
GAGGCAGTTAAGAAATGGTT+AGG | 0.443261 | 3:-612076 | MsG0380011504.01.T01:CDS |
CCGGCCTCCATCGGTATGCT+TGG | 0.446486 | 3:+616778 | None:intergenic |
AACACTATTTGCTTCTTTGG+TGG | 0.448242 | 3:-611914 | MsG0380011504.01.T01:CDS |
CTACGAATCAAACACACAAT+GGG | 0.452008 | 3:-613709 | MsG0380011504.01.T01:CDS |
CTAAGGTTGTGAAACATTTG+AGG | 0.452359 | 3:+615246 | None:intergenic |
TTGAAAATCCATAAGTAAAA+GGG | 0.454918 | 3:+612974 | None:intergenic |
CCCTGCATATTTCCAATAAG+TGG | 0.459068 | 3:-611632 | MsG0380011504.01.T01:three_prime_UTR |
AGACTCAATTAGTTAATAAG+TGG | 0.466347 | 3:-611553 | MsG0380011504.01.T01:three_prime_UTR |
CAGTCCACTGCAAGTACATA+TGG | 0.468225 | 3:+615363 | None:intergenic |
TGACAGAGGCAGTTAAGAAA+TGG | 0.472408 | 3:-612081 | MsG0380011504.01.T01:CDS |
ACCGGCTGACGAGAAGTTAC+CGG | 0.481496 | 3:-616727 | MsG0380011504.01.T01:CDS |
ACCACTTATTGGAAATATGC+AGG | 0.484526 | 3:+611631 | None:intergenic |
CCCGGTAACTTCTCGTCAGC+CGG | 0.486188 | 3:+616726 | None:intergenic |
GGTGATGATCGAGAAATTAC+CGG | 0.486468 | 3:-616745 | MsG0380011504.01.T01:CDS |
ATGGCTTGTTTGGCTGAAGA+TGG | 0.488092 | 3:+615321 | None:intergenic |
TCACAGATAGGATTCTCATA+TGG | 0.490844 | 3:-613177 | MsG0380011504.01.T01:intron |
ATTTCATTATATCGTATCCA+TGG | 0.492401 | 3:-616851 | MsG0380011504.01.T01:CDS |
ACATTTATGATAATCAATCT+AGG | 0.492978 | 3:-615215 | MsG0380011504.01.T01:CDS |
TTTATGTGTCTCGTGAAAGA+AGG | 0.493243 | 3:-615558 | MsG0380011504.01.T01:CDS |
GATGGATGGTTTGAGAGGTC+CGG | 0.494154 | 3:-615047 | MsG0380011504.01.T01:CDS |
AAATAGAAAGCTTATTAGAA+GGG | 0.495228 | 3:+616613 | None:intergenic |
GCTAGTGTCATTAGAATCCA+TGG | 0.500503 | 3:+616834 | None:intergenic |
TAAGGTTGTGAAACATTTGA+GGG | 0.508349 | 3:+615247 | None:intergenic |
TATATATAAATGAAAGTGCT+TGG | 0.508875 | 3:-617048 | MsG0380011504.01.T01:five_prime_UTR |
ATGCCTTCTTTGATATCAGT+TGG | 0.510191 | 3:+613054 | None:intergenic |
TGTTACAGGTCACAGACCCT+TGG | 0.513094 | 3:-612243 | MsG0380011504.01.T01:intron |
GATGGTTTGTTGTCCTCGGA+TGG | 0.514250 | 3:+613791 | None:intergenic |
TATAGTACACTAATTGGAGT+TGG | 0.514736 | 3:+617075 | None:intergenic |
ACAAATTCAACATTTGATAG+AGG | 0.517780 | 3:-612188 | MsG0380011504.01.T01:CDS |
ACAAAGAAACAGTCCAATCA+TGG | 0.517998 | 3:-616947 | MsG0380011504.01.T01:CDS |
TGGTGACTGATAGACCTTCT+CGG | 0.518496 | 3:-616019 | MsG0380011504.01.T01:CDS |
GAAACAAGACACATATGAAG+TGG | 0.529769 | 3:+616895 | None:intergenic |
CCTCAAGTCTGCTTCTTGAA+AGG | 0.530046 | 3:-612865 | MsG0380011504.01.T01:CDS |
CCATTGTGTGTTTGATTCGT+AGG | 0.531038 | 3:+613710 | None:intergenic |
TATTTCAGACAATGTGGCAA+GGG | 0.537874 | 3:-615069 | MsG0380011504.01.T01:intron |
CCGGCTGACGAGAAGTTACC+GGG | 0.539126 | 3:-616726 | MsG0380011504.01.T01:CDS |
TGTTTCTTTGTGAAGTGTGA+AGG | 0.540522 | 3:+616959 | None:intergenic |
ACTATGAGTAACACAACCAT+TGG | 0.541281 | 3:+611938 | None:intergenic |
TTGAATTTGTGAGGAAGTGA+TGG | 0.541973 | 3:+615535 | None:intergenic |
AAGTACACACCAATGTATTG+AGG | 0.543839 | 3:+615503 | None:intergenic |
AGTACACACCAATGTATTGA+GGG | 0.544381 | 3:+615504 | None:intergenic |
ATGGATGGTTTGAGAGGTCC+GGG | 0.544571 | 3:-615046 | MsG0380011504.01.T01:CDS |
TAACTATGAAAAGTAAGAGT+GGG | 0.548538 | 3:-611787 | MsG0380011504.01.T01:CDS |
GTCTCAGGTTTAATCAGCAA+TGG | 0.549566 | 3:-615387 | MsG0380011504.01.T01:CDS |
GGTCCGGGTCTTTCTGGCAG+TGG | 0.551528 | 3:-615031 | MsG0380011504.01.T01:CDS |
AATTACAAAATAGTAAGTAT+CGG | 0.558572 | 3:-611505 | MsG0380011504.01.T01:three_prime_UTR |
ATCGACTCACCGGCCTCCAT+CGG | 0.559180 | 3:+616769 | None:intergenic |
ACAATGTGGCAAGGGATGGA+TGG | 0.559193 | 3:-615061 | MsG0380011504.01.T01:CDS |
TGTAAAGTCAAGGTGTCCTA+AGG | 0.559519 | 3:-616493 | MsG0380011504.01.T01:CDS |
TATTAATCTAAACATAACAA+TGG | 0.560203 | 3:+611684 | None:intergenic |
CTTGAGTGATTCTATGTATG+TGG | 0.560568 | 3:+613815 | None:intergenic |
ATGGCTCAGTGTCAATGTGG+TGG | 0.563672 | 3:-612153 | MsG0380011504.01.T01:CDS |
TCAGACAATGTGGCAAGGGA+TGG | 0.566411 | 3:-615065 | MsG0380011504.01.T01:intron |
CCTACGAATCAAACACACAA+TGG | 0.567795 | 3:-613710 | MsG0380011504.01.T01:CDS |
TCAAGAAATATGAACAAGGT+AGG | 0.568930 | 3:-611994 | MsG0380011504.01.T01:CDS |
TGGCTCAGTGTCAATGTGGT+GGG | 0.570848 | 3:-612152 | MsG0380011504.01.T01:CDS |
TCAACCAAGCATACCGATGG+AGG | 0.570936 | 3:-616782 | MsG0380011504.01.T01:CDS |
TCTTAGGACACAAGAATTCG+AGG | 0.571318 | 3:-616436 | MsG0380011504.01.T01:CDS |
ATAACTATGAAAAGTAAGAG+TGG | 0.571693 | 3:-611788 | MsG0380011504.01.T01:CDS |
GTGTTCATAACTTCAACAGT+TGG | 0.573512 | 3:+616663 | None:intergenic |
TGATGCCCAAAACTACTTTG+GGG | 0.574100 | 3:-613844 | MsG0380011504.01.T01:CDS |
GAGCCATTACATAGCTAACC+AGG | 0.577568 | 3:+611837 | None:intergenic |
AGGAATATCTGTGTTTCCAA+AGG | 0.584748 | 3:-612845 | MsG0380011504.01.T01:intron |
GCAATTTATTTCAGACAATG+TGG | 0.587290 | 3:-615075 | MsG0380011504.01.T01:intron |
GGATTTACCTCGATCCGAGA+AGG | 0.587807 | 3:+616005 | None:intergenic |
CCAAGCATACCGATGGAGGC+CGG | 0.589912 | 3:-616778 | MsG0380011504.01.T01:CDS |
AGCTTTGTACATGTCTCCAA+TGG | 0.591743 | 3:-611954 | MsG0380011504.01.T01:CDS |
CCTTTCAAGAAGCAGACTTG+AGG | 0.591846 | 3:+612865 | None:intergenic |
GCATGCTTCAATTGGTGAAG+TGG | 0.593888 | 3:-613035 | MsG0380011504.01.T01:CDS |
TCACTTCCTCACAAATTCAA+AGG | 0.597910 | 3:-615532 | MsG0380011504.01.T01:CDS |
CCACTTATTGGAAATATGCA+GGG | 0.599067 | 3:+611632 | None:intergenic |
GCACCTCCTTTGAATTTGTG+AGG | 0.599322 | 3:+615526 | None:intergenic |
GCACCAACTGATATCAAAGA+AGG | 0.601020 | 3:-613057 | MsG0380011504.01.T01:CDS |
TTATTTCAGACAATGTGGCA+AGG | 0.603544 | 3:-615070 | MsG0380011504.01.T01:intron |
ATGGAGGCCGGTGAGTCGAT+CGG | 0.604807 | 3:-616766 | MsG0380011504.01.T01:CDS |
TATCAAATGTTGAATTTGTG+TGG | 0.607267 | 3:+612192 | None:intergenic |
TTACTAGAGAGTACTATCAC+TGG | 0.610277 | 3:-613150 | MsG0380011504.01.T01:CDS |
CAAGGGATGGATGGTTTGAG+AGG | 0.611416 | 3:-615052 | MsG0380011504.01.T01:CDS |
CACACAAATATGTCGAGTCC+CGG | 0.615872 | 3:+616708 | None:intergenic |
CGAGACACATAAACAACACG+TGG | 0.616062 | 3:+615568 | None:intergenic |
AGGAGGTGCCCTCAATACAT+TGG | 0.621577 | 3:-615512 | MsG0380011504.01.T01:intron |
TTACCACTGCCAGAAAGACC+CGG | 0.628297 | 3:+615028 | None:intergenic |
ATCATCACCGATCGACTCAC+CGG | 0.630972 | 3:+616759 | None:intergenic |
AATGCAAACACTGCAAACCA+AGG | 0.637039 | 3:+612226 | None:intergenic |
CACATACATAGAATCACTCA+AGG | 0.639480 | 3:-613814 | MsG0380011504.01.T01:CDS |
ATGCAAACACTGCAAACCAA+GGG | 0.640787 | 3:+612227 | None:intergenic |
TGATAGACCTTCTCGGATCG+AGG | 0.649181 | 3:-616012 | MsG0380011504.01.T01:intron |
TGGACCATATGTACTTGCAG+TGG | 0.649207 | 3:-615367 | MsG0380011504.01.T01:CDS |
GAATCACTCAAGGCCATCCG+AGG | 0.649360 | 3:-613804 | MsG0380011504.01.T01:CDS |
TAGTTTGTTTGCAATGACAG+AGG | 0.658463 | 3:-612095 | MsG0380011504.01.T01:CDS |
GTCAAACAAAGCACTTGACA+CGG | 0.666415 | 3:-612029 | MsG0380011504.01.T01:CDS |
CTTCCTCACAAATTCAAAGG+AGG | 0.671490 | 3:-615529 | MsG0380011504.01.T01:CDS |
TGGATCAAGAAAGAAACACA+TGG | 0.680933 | 3:+615302 | None:intergenic |
GTGATGGCTCAGTGTCAATG+TGG | 0.686344 | 3:-612156 | MsG0380011504.01.T01:CDS |
GGTGCACACCCTAAGAAACA+TGG | 0.694506 | 3:+613075 | None:intergenic |
AAAATCAAGAAATATGAACA+AGG | 0.697470 | 3:-611998 | MsG0380011504.01.T01:CDS |
TACGAATCAAACACACAATG+GGG | 0.714112 | 3:-613708 | MsG0380011504.01.T01:CDS |
ACTAGTGCGAGTTCCACGAG+AGG | 0.748026 | 3:-617122 | MsG0380011504.01.T01:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATATAATTAATTAATGTT+TGG | - | Chr3:612403-612422 | MsG0380011504.01.T01:intron | 10.0% |
!! | ATAAGAATAAAAATAAATGA+AGG | - | Chr3:614092-614111 | MsG0380011504.01.T01:intron | 10.0% |
!! | CACAAAAAAATTATTATATA+AGG | + | Chr3:613088-613107 | None:intergenic | 10.0% |
!! | GAAATTTGAAAAATAAAAAT+AGG | - | Chr3:616158-616177 | MsG0380011504.01.T01:intron | 10.0% |
!!! | AATCAACAAAATTTTAATTA+AGG | - | Chr3:613367-613386 | MsG0380011504.01.T01:intron | 10.0% |
!!! | CTTATATAATAATTTTTTTG+TGG | - | Chr3:613086-613105 | MsG0380011504.01.T01:CDS | 10.0% |
!!! | TTTATTTTAGATTATAAATG+AGG | - | Chr3:612942-612961 | MsG0380011504.01.T01:CDS | 10.0% |
!!! | TTTTTTTTGGAAAATAAAAA+GGG | - | Chr3:617106-617125 | MsG0380011504.01.T01:five_prime_UTR | 10.0% |
!!! | TTTTTTTTTGGAAAATAAAA+AGG | - | Chr3:617105-617124 | MsG0380011504.01.T01:five_prime_UTR | 10.0% |
!! | AATTACAAAATAGTAAGTAT+CGG | - | Chr3:617039-617058 | MsG0380011504.01.T01:five_prime_UTR | 15.0% |
!! | ATGATTGCAAAATAATAATT+AGG | + | Chr3:613599-613618 | None:intergenic | 15.0% |
!! | GAAAATAAAATACCTTAATT+TGG | + | Chr3:612144-612163 | None:intergenic | 15.0% |
!! | TATATATATAGTACACTAAT+TGG | + | Chr3:611478-611497 | None:intergenic | 15.0% |
!! | TATTAATCTAAACATAACAA+TGG | + | Chr3:616863-616882 | None:intergenic | 15.0% |
!! | TGAAAAAATATCAATCAATT+CGG | + | Chr3:615105-615124 | None:intergenic | 15.0% |
!!! | ATTTTACAAGTTTATTTTGT+AGG | - | Chr3:614008-614027 | MsG0380011504.01.T01:intron | 15.0% |
!!! | GACATTGTATTTTTTTTTTT+TGG | - | Chr3:617093-617112 | MsG0380011504.01.T01:five_prime_UTR | 15.0% |
!!! | GATTAACTATTTTTTAAATG+TGG | - | Chr3:612721-612740 | MsG0380011504.01.T01:intron | 15.0% |
!!! | TGTGTAAACTTTTAAAATTT+TGG | + | Chr3:615026-615045 | None:intergenic | 15.0% |
!! | AAAATCAAGAAATATGAACA+AGG | - | Chr3:616546-616565 | MsG0380011504.01.T01:CDS | 20.0% |
!! | AAATAGAAAGCTTATTAGAA+GGG | + | Chr3:611934-611953 | None:intergenic | 20.0% |
!! | AAATCAACCACATAAAAATT+TGG | - | Chr3:614571-614590 | MsG0380011504.01.T01:intron | 20.0% |
!! | AAATTGTCTTCACTTATAAA+TGG | - | Chr3:614515-614534 | MsG0380011504.01.T01:intron | 20.0% |
!! | AACAAATGCAATATATTTAG+AGG | + | Chr3:613272-613291 | None:intergenic | 20.0% |
!! | AACTACATGAAATCTTATAA+TGG | + | Chr3:612257-612276 | None:intergenic | 20.0% |
!! | ACATGTTAAATTATAAAACC+AGG | + | Chr3:616268-616287 | None:intergenic | 20.0% |
!! | ACATTTATGATAATCAATCT+AGG | - | Chr3:613329-613348 | MsG0380011504.01.T01:intron | 20.0% |
!! | ACTACATGAAATCTTATAAT+GGG | + | Chr3:612256-612275 | None:intergenic | 20.0% |
!! | GACTAAAATATCTATTTACT+TGG | + | Chr3:614908-614927 | None:intergenic | 20.0% |
!! | GAGAAAAATATTGAGAAATT+CGG | - | Chr3:612479-612498 | MsG0380011504.01.T01:intron | 20.0% |
!! | GATACATTTATCAAAATCTA+GGG | - | Chr3:614877-614896 | MsG0380011504.01.T01:intron | 20.0% |
!! | GTTAACTATTTGTAATAAGT+TGG | - | Chr3:612673-612692 | MsG0380011504.01.T01:intron | 20.0% |
!! | GTTAGATTATAAACTTGATT+TGG | - | Chr3:616947-616966 | MsG0380011504.01.T01:CDS | 20.0% |
!! | TAAATAGAAAGCTTATTAGA+AGG | + | Chr3:611935-611954 | None:intergenic | 20.0% |
!! | TACAATTTACAATTTGCATT+CGG | + | Chr3:612799-612818 | None:intergenic | 20.0% |
!! | TATTACTATTTCGTAAATTG+AGG | - | Chr3:615138-615157 | MsG0380011504.01.T01:intron | 20.0% |
!! | TCCAATCATAATAAAATTCA+TGG | + | Chr3:615846-615865 | None:intergenic | 20.0% |
!! | TGATACATTTATCAAAATCT+AGG | - | Chr3:614876-614895 | MsG0380011504.01.T01:intron | 20.0% |
!! | TTGAAAATCCATAAGTAAAA+GGG | + | Chr3:615573-615592 | None:intergenic | 20.0% |
!!! | AAAGAAAAGTACTCTTATAT+TGG | + | Chr3:614655-614674 | None:intergenic | 20.0% |
!!! | AAATAGTCCAAATTTTTATG+TGG | + | Chr3:614581-614600 | None:intergenic | 20.0% |
!!! | AAATATGTACCTTTTTGAAT+TGG | + | Chr3:613576-613595 | None:intergenic | 20.0% |
!!! | AAATTCATGGTTTTAAATTG+CGG | + | Chr3:615833-615852 | None:intergenic | 20.0% |
!!! | AATAGAAGTGCATTATTATT+TGG | - | Chr3:613546-613565 | MsG0380011504.01.T01:intron | 20.0% |
!!! | ACAACTAAAAACCTAATTTT+AGG | + | Chr3:614194-614213 | None:intergenic | 20.0% |
!!! | ACACCATATTTTTTACAAAA+GGG | + | Chr3:612034-612053 | None:intergenic | 20.0% |
!!! | ACCATGAATTTTATTATGAT+TGG | - | Chr3:615842-615861 | MsG0380011504.01.T01:intron | 20.0% |
!!! | ACTATATGTGGTATATTTTT+GGG | + | Chr3:615266-615285 | None:intergenic | 20.0% |
!!! | ATTATTCAATGTAATTTGTG+AGG | + | Chr3:612606-612625 | None:intergenic | 20.0% |
!!! | CATGTTTTATAGATAGTAAT+AGG | + | Chr3:615205-615224 | None:intergenic | 20.0% |
!!! | GTTTATTTGTTAATTAGTTG+AGG | + | Chr3:612858-612877 | None:intergenic | 20.0% |
!!! | TACACCATATTTTTTACAAA+AGG | + | Chr3:612035-612054 | None:intergenic | 20.0% |
!!! | TACTATATGTGGTATATTTT+TGG | + | Chr3:615267-615286 | None:intergenic | 20.0% |
!!! | TATATATAAATGAAAGTGCT+TGG | - | Chr3:611496-611515 | MsG0380011504.01.T01:three_prime_UTR | 20.0% |
!!! | TTGAATATATGTTTTACCTT+TGG | + | Chr3:615718-615737 | None:intergenic | 20.0% |
!!! | TTGAATTTTTATTCACAGAT+AGG | - | Chr3:615355-615374 | MsG0380011504.01.T01:CDS | 20.0% |
!!! | TTTCACACATTTTTTTATTG+TGG | - | Chr3:613122-613141 | MsG0380011504.01.T01:CDS | 20.0% |
!!! | TTTGATGATCATATAAATGA+TGG | - | Chr3:613440-613459 | MsG0380011504.01.T01:intron | 20.0% |
!!! | TTTGTACAACAATATTTTAG+AGG | + | Chr3:615068-615087 | None:intergenic | 20.0% |
!!! | TTTTAATTTACTGTTGTTAC+AGG | - | Chr3:616287-616306 | MsG0380011504.01.T01:intron | 20.0% |
!!! | TTTTGAAAGATTCTTTTTGA+TGG | + | Chr3:614774-614793 | None:intergenic | 20.0% |
! | AAAAATATGGTGTAAAGTCA+AGG | - | Chr3:612041-612060 | MsG0380011504.01.T01:CDS | 25.0% |
! | ACAAATTCAACATTTGATAG+AGG | - | Chr3:616356-616375 | MsG0380011504.01.T01:intron | 25.0% |
! | AGACTCAATTAGTTAATAAG+TGG | - | Chr3:616991-617010 | MsG0380011504.01.T01:five_prime_UTR | 25.0% |
! | AGTTTACACATAACATAACA+AGG | - | Chr3:615036-615055 | MsG0380011504.01.T01:CDS | 25.0% |
! | ATAACTATGAAAAGTAAGAG+TGG | - | Chr3:616756-616775 | MsG0380011504.01.T01:CDS | 25.0% |
! | ATATGAGAGAAAAAAACCTT+AGG | + | Chr3:612070-612089 | None:intergenic | 25.0% |
! | ATTTCATCCATATATGCTAT+TGG | - | Chr3:615634-615653 | MsG0380011504.01.T01:intron | 25.0% |
! | ATTTCATTATATCGTATCCA+TGG | - | Chr3:611693-611712 | MsG0380011504.01.T01:three_prime_UTR | 25.0% |
! | CAAAAAGAATCTTTCAAAAG+AGG | - | Chr3:614775-614794 | MsG0380011504.01.T01:intron | 25.0% |
! | CTTGAAAATCCATAAGTAAA+AGG | + | Chr3:615574-615593 | None:intergenic | 25.0% |
! | GAAGTAAATTGTAAACTAAG+TGG | - | Chr3:612746-612765 | MsG0380011504.01.T01:intron | 25.0% |
! | GTACTATTCCTCTTAAAATT+TGG | + | Chr3:614046-614065 | None:intergenic | 25.0% |
! | GTTTACACATAACATAACAA+GGG | - | Chr3:615037-615056 | MsG0380011504.01.T01:CDS | 25.0% |
! | TAACTATGAAAAGTAAGAGT+GGG | - | Chr3:616757-616776 | MsG0380011504.01.T01:CDS | 25.0% |
! | TAGTTAAAGACAAATCGTTT+AGG | + | Chr3:616027-616046 | None:intergenic | 25.0% |
! | TATCAAATGTTGAATTTGTG+TGG | + | Chr3:616355-616374 | None:intergenic | 25.0% |
! | TATGAATCCAATAGCATATA+TGG | + | Chr3:615644-615663 | None:intergenic | 25.0% |
! | TCTATTTATCTTTCTGATGA+TGG | - | Chr3:611947-611966 | MsG0380011504.01.T01:CDS | 25.0% |
! | TGCAAATTGTAAATTGTATG+TGG | - | Chr3:612801-612820 | MsG0380011504.01.T01:intron | 25.0% |
! | TTACATGACAAGTAATAATG+TGG | + | Chr3:613687-613706 | None:intergenic | 25.0% |
! | TTCACTACAAAAGTTGTATA+TGG | + | Chr3:611536-611555 | None:intergenic | 25.0% |
!! | CTTAATCACAAATTCTAAGA+TGG | + | Chr3:614459-614478 | None:intergenic | 25.0% |
!! | GATCATATTTTGTCTAATGT+AGG | - | Chr3:614537-614556 | MsG0380011504.01.T01:intron | 25.0% |
!! | GTTCCCTTTTGTAAAAAATA+TGG | - | Chr3:612028-612047 | MsG0380011504.01.T01:CDS | 25.0% |
!! | TAGTAAGTAAATTTTTGTCC+TGG | - | Chr3:616247-616266 | MsG0380011504.01.T01:intron | 25.0% |
!! | TCTATTTAAAATTGCGATTG+TGG | - | Chr3:615749-615768 | MsG0380011504.01.T01:intron | 25.0% |
!! | TGTCGATCTTTACAATTTTA+CGG | + | Chr3:614930-614949 | None:intergenic | 25.0% |
!!! | AATTTTGGTGCAAAAATTTG+AGG | + | Chr3:615011-615030 | None:intergenic | 25.0% |
!!! | CAAGTTTATTTTGTAGGTTT+TGG | - | Chr3:614014-614033 | MsG0380011504.01.T01:intron | 25.0% |
!!! | CATAAATGTCTTTTTTGCTA+AGG | + | Chr3:613318-613337 | None:intergenic | 25.0% |
!!! | GTTGGTTTTTACAATTTAAC+AGG | - | Chr3:612439-612458 | MsG0380011504.01.T01:intron | 25.0% |
!!! | TAAGGTTTTTTTCTCTCATA+TGG | - | Chr3:612069-612088 | MsG0380011504.01.T01:CDS | 25.0% |
!!! | TACTCAATTTGCTAAAGTTT+GGG | - | Chr3:612006-612025 | MsG0380011504.01.T01:CDS | 25.0% |
!!! | TATAAACTTGATTTGGTCAT+TGG | - | Chr3:616954-616973 | MsG0380011504.01.T01:CDS | 25.0% |
AAATGCTAACTTCAATGTTG+TGG | + | Chr3:614624-614643 | None:intergenic | 30.0% | |
AAGAGGAATAGTACATAACT+AGG | - | Chr3:614052-614071 | MsG0380011504.01.T01:intron | 30.0% | |
AATATGTGAAGTCTACTTAG+AGG | + | Chr3:611626-611645 | None:intergenic | 30.0% | |
AATCCAATAAAGGATCACAA+TGG | - | Chr3:612557-612576 | MsG0380011504.01.T01:intron | 30.0% | |
AATCCATTGTGATCCTTTAT+TGG | + | Chr3:612563-612582 | None:intergenic | 30.0% | |
AATTAGACTACACCACTTAT+TGG | + | Chr3:616927-616946 | None:intergenic | 30.0% | |
ACAATGGAGATTTCAGTTTA+AGG | + | Chr3:616847-616866 | None:intergenic | 30.0% | |
ATGTAAAAACCAAGTGATTG+AGG | + | Chr3:616069-616088 | None:intergenic | 30.0% | |
ATTATCTACTAGCAGCTTAA+AGG | + | Chr3:614157-614176 | None:intergenic | 30.0% | |
CAAAAACACCATGTTTCTTA+GGG | - | Chr3:615461-615480 | MsG0380011504.01.T01:intron | 30.0% | |
CAAAATTGTCTATGCTACAA+TGG | - | Chr3:615919-615938 | MsG0380011504.01.T01:intron | 30.0% | |
CGGACAATACATAACTATAT+TGG | - | Chr3:617059-617078 | MsG0380011504.01.T01:five_prime_UTR | 30.0% | |
GATCAACTGAATACTATATG+TGG | + | Chr3:615278-615297 | None:intergenic | 30.0% | |
GATTGCAAAAAATGAATGTG+TGG | + | Chr3:613645-613664 | None:intergenic | 30.0% | |
GCAATATATTTAGAGGTTTC+TGG | + | Chr3:613265-613284 | None:intergenic | 30.0% | |
GCAATTTATTTCAGACAATG+TGG | - | Chr3:613469-613488 | MsG0380011504.01.T01:intron | 30.0% | |
GCTATTGGATTCATACTTTA+TGG | - | Chr3:615649-615668 | MsG0380011504.01.T01:intron | 30.0% | |
GTAAAATCTCTTAGAACTTG+TGG | - | Chr3:614235-614254 | MsG0380011504.01.T01:intron | 30.0% | |
GTTATAATCCCCTCAAAAAT+TGG | + | Chr3:616741-616760 | None:intergenic | 30.0% | |
GTTTACATTGTGGTAAAATG+CGG | - | Chr3:615785-615804 | MsG0380011504.01.T01:intron | 30.0% | |
TAAGGTTGTGAAACATTTGA+GGG | + | Chr3:613300-613319 | None:intergenic | 30.0% | |
TACAAAAAGTTTAGACGTGT+TGG | + | Chr3:613906-613925 | None:intergenic | 30.0% | |
TACTATTTCGTAAATTGAGG+AGG | - | Chr3:615141-615160 | MsG0380011504.01.T01:intron | 30.0% | |
TATAGTACACTAATTGGAGT+TGG | + | Chr3:611472-611491 | None:intergenic | 30.0% | |
TCAAGAAATATGAACAAGGT+AGG | - | Chr3:616550-616569 | MsG0380011504.01.T01:CDS | 30.0% | |
TTTGGAAGTCCAATTCAAAA+AGG | - | Chr3:613564-613583 | MsG0380011504.01.T01:intron | 30.0% | |
! | AAATACAGCCCTTTTACTTA+TGG | - | Chr3:615562-615581 | MsG0380011504.01.T01:CDS | 30.0% |
! | AGCTTATTCTATCAGTTTTG+TGG | - | Chr3:611735-611754 | MsG0380011504.01.T01:three_prime_UTR | 30.0% |
! | CTAAGAAACATGGTGTTTTT+GGG | + | Chr3:615462-615481 | None:intergenic | 30.0% |
! | CTTAGCTATCCAATTTTTGA+GGG | - | Chr3:616729-616748 | MsG0380011504.01.T01:CDS | 30.0% |
! | GCTAGTAGATAATTTTTGCT+AGG | - | Chr3:614164-614183 | MsG0380011504.01.T01:intron | 30.0% |
! | TCAGTTTAAGGTACAAATAG+TGG | + | Chr3:616835-616854 | None:intergenic | 30.0% |
! | TCTTAGCTATCCAATTTTTG+AGG | - | Chr3:616728-616747 | MsG0380011504.01.T01:CDS | 30.0% |
! | TTCTTTTGAGCGTTACAATT+TGG | + | Chr3:612293-612312 | None:intergenic | 30.0% |
!! | AGAGATTTTGAAGACATGTT+TGG | - | Chr3:616675-616694 | MsG0380011504.01.T01:CDS | 30.0% |
!! | CACTTGGTTTTTACATGAAA+CGG | - | Chr3:616073-616092 | MsG0380011504.01.T01:CDS | 30.0% |
!! | CAGTTTTGTGTAGTTATGTT+AGG | + | Chr3:614482-614501 | None:intergenic | 30.0% |
!! | CTACTCAATTTGCTAAAGTT+TGG | - | Chr3:612005-612024 | MsG0380011504.01.T01:CDS | 30.0% |
!! | GGCATTTTAGTCATTGAATT+TGG | + | Chr3:615184-615203 | None:intergenic | 30.0% |
!! | TTAGCTATCCAATTTTTGAG+GGG | - | Chr3:616730-616749 | MsG0380011504.01.T01:CDS | 30.0% |
!! | TTCAACAGTTGGTTCTTTTT+CGG | + | Chr3:611873-611892 | None:intergenic | 30.0% |
!!! | CTTATTTTTTCAAACCAAGC+AGG | + | Chr3:615869-615888 | None:intergenic | 30.0% |
!!! | TAATTTTTAAGTACCTCTCG+TGG | + | Chr3:611438-611457 | None:intergenic | 30.0% |
!!! | TACTCTTTTTGGGATTAAAG+AGG | - | Chr3:611982-612001 | MsG0380011504.01.T01:CDS | 30.0% |
AACACTATTTGCTTCTTTGG+TGG | - | Chr3:616630-616649 | MsG0380011504.01.T01:CDS | 35.0% | |
AAGTACACACCAATGTATTG+AGG | + | Chr3:613044-613063 | None:intergenic | 35.0% | |
AATCTCTTAGAACTTGTGGT+TGG | - | Chr3:614239-614258 | MsG0380011504.01.T01:intron | 35.0% | |
ACAAAGAAACAGTCCAATCA+TGG | - | Chr3:611597-611616 | MsG0380011504.01.T01:three_prime_UTR | 35.0% | |
ACAGGTTAAGTACGTGAAAA+TGG | - | Chr3:612457-612476 | MsG0380011504.01.T01:intron | 35.0% | |
ACCACTTATTGGAAATATGC+AGG | + | Chr3:616916-616935 | None:intergenic | 35.0% | |
ACTATGAGTAACACAACCAT+TGG | + | Chr3:616609-616628 | None:intergenic | 35.0% | |
AGCTTCTGTTAAGATCTGTT+GGG | + | Chr3:614430-614449 | None:intergenic | 35.0% | |
AGGAATATCTGTGTTTCCAA+AGG | - | Chr3:615699-615718 | MsG0380011504.01.T01:intron | 35.0% | |
AGTACACACCAATGTATTGA+GGG | + | Chr3:613043-613062 | None:intergenic | 35.0% | |
ATGACAAGAACTATTGAGCT+TGG | - | Chr3:614366-614385 | MsG0380011504.01.T01:intron | 35.0% | |
ATGCCTTCTTTGATATCAGT+TGG | + | Chr3:615493-615512 | None:intergenic | 35.0% | |
CACATACATAGAATCACTCA+AGG | - | Chr3:614730-614749 | MsG0380011504.01.T01:intron | 35.0% | |
CATTTGATAGAGGTCATTTC+TGG | - | Chr3:616366-616385 | MsG0380011504.01.T01:intron | 35.0% | |
CCAAAAACACCATGTTTCTT+AGG | - | Chr3:615460-615479 | MsG0380011504.01.T01:intron | 35.0% | |
CCACTTATTGGAAATATGCA+GGG | + | Chr3:616915-616934 | None:intergenic | 35.0% | |
CTAAGGTTGTGAAACATTTG+AGG | + | Chr3:613301-613320 | None:intergenic | 35.0% | |
CTACGAATCAAACACACAAT+GGG | - | Chr3:614835-614854 | MsG0380011504.01.T01:intron | 35.0% | |
CTCAATAGTTCTTGTCATGA+GGG | + | Chr3:614364-614383 | None:intergenic | 35.0% | |
CTTGAGTGATTCTATGTATG+TGG | + | Chr3:614732-614751 | None:intergenic | 35.0% | |
GAAACAAGACACATATGAAG+TGG | + | Chr3:611652-611671 | None:intergenic | 35.0% | |
GATCGAGGTAAATCCAATAA+AGG | - | Chr3:612547-612566 | MsG0380011504.01.T01:intron | 35.0% | |
GTGAACACTATTTGCTTCTT+TGG | - | Chr3:616627-616646 | MsG0380011504.01.T01:CDS | 35.0% | |
GTGTTCATAACTTCAACAGT+TGG | + | Chr3:611884-611903 | None:intergenic | 35.0% | |
GTTTGCAAACACAATTGCAT+CGG | + | Chr3:615811-615830 | None:intergenic | 35.0% | |
TAAACAACACGTGGAATTTC+TGG | + | Chr3:612970-612989 | None:intergenic | 35.0% | |
TAAGAGTCGTTGAATGATGT+AGG | - | Chr3:613950-613969 | MsG0380011504.01.T01:intron | 35.0% | |
TACGAATCAAACACACAATG+GGG | - | Chr3:614836-614855 | MsG0380011504.01.T01:intron | 35.0% | |
TACTTAGAGGTAACCATGAT+TGG | + | Chr3:611613-611632 | None:intergenic | 35.0% | |
TATTTCAGACAATGTGGCAA+GGG | - | Chr3:613475-613494 | MsG0380011504.01.T01:intron | 35.0% | |
TCAATAGTTCTTGTCATGAG+GGG | + | Chr3:614363-614382 | None:intergenic | 35.0% | |
TCACAGATAGGATTCTCATA+TGG | - | Chr3:615367-615386 | MsG0380011504.01.T01:CDS | 35.0% | |
TCACTTCCTCACAAATTCAA+AGG | - | Chr3:613012-613031 | MsG0380011504.01.T01:CDS | 35.0% | |
TGCTAGGTGTACCTAAAATT+AGG | - | Chr3:614180-614199 | MsG0380011504.01.T01:intron | 35.0% | |
TGGATCAAGAAAGAAACACA+TGG | + | Chr3:613245-613264 | None:intergenic | 35.0% | |
TGTTTCTTTGTGAAGTGTGA+AGG | + | Chr3:611588-611607 | None:intergenic | 35.0% | |
TTATTATGATTGGACCTGCT+TGG | - | Chr3:615852-615871 | MsG0380011504.01.T01:intron | 35.0% | |
TTATTTCAGACAATGTGGCA+AGG | - | Chr3:613474-613493 | MsG0380011504.01.T01:intron | 35.0% | |
TTGAATTTGTGAGGAAGTGA+TGG | + | Chr3:613012-613031 | None:intergenic | 35.0% | |
TTGATGCCCAAAACTACTTT+GGG | - | Chr3:614699-614718 | MsG0380011504.01.T01:intron | 35.0% | |
TTTATGTGTCTCGTGAAAGA+AGG | - | Chr3:612986-613005 | MsG0380011504.01.T01:CDS | 35.0% | |
TTTGGATTCACATGACATGT+TGG | - | Chr3:612421-612440 | MsG0380011504.01.T01:intron | 35.0% | |
! | AGTCACCATACGAAGATTTT+TGG | + | Chr3:612513-612532 | None:intergenic | 35.0% |
! | CCTAAGAAACATGGTGTTTT+TGG | + | Chr3:615463-615482 | None:intergenic | 35.0% |
! | CTTAATCTTGATGACCCATT+AGG | - | Chr3:613878-613897 | MsG0380011504.01.T01:intron | 35.0% |
! | CTTCTGCTGTTACTCTTTTT+GGG | - | Chr3:611972-611991 | MsG0380011504.01.T01:CDS | 35.0% |
! | GGTCACAACCAAATTTTAAG+AGG | - | Chr3:614035-614054 | MsG0380011504.01.T01:intron | 35.0% |
! | GTCACCATACGAAGATTTTT+GGG | + | Chr3:612512-612531 | None:intergenic | 35.0% |
! | TCACCATACGAAGATTTTTG+GGG | + | Chr3:612511-612530 | None:intergenic | 35.0% |
! | TTTCCTGGTTAGCTATGTAA+TGG | - | Chr3:616704-616723 | MsG0380011504.01.T01:CDS | 35.0% |
! | TTTGCTTCTTTGGTGGTTTA+TGG | - | Chr3:616637-616656 | MsG0380011504.01.T01:CDS | 35.0% |
! | TTTTGAGCGTTACAATTTGG+AGG | + | Chr3:612290-612309 | None:intergenic | 35.0% |
!! | AAAGAAACACATGGCTTGTT+TGG | + | Chr3:613236-613255 | None:intergenic | 35.0% |
!! | CAAGGTAGGTTTGATTTTCA+AGG | - | Chr3:616564-616583 | MsG0380011504.01.T01:CDS | 35.0% |
!! | CATGTTTCAAAGAGTATCGA+CGG | + | Chr3:613850-613869 | None:intergenic | 35.0% |
!! | TAGTTTGTTTGCAATGACAG+AGG | - | Chr3:616449-616468 | MsG0380011504.01.T01:CDS | 35.0% |
!! | TCAACAGTTGGTTCTTTTTC+GGG | + | Chr3:611872-611891 | None:intergenic | 35.0% |
!! | TCAATCTAGGACTGCTTTTA+AGG | - | Chr3:613342-613361 | MsG0380011504.01.T01:intron | 35.0% |
!! | TGTTGTTTCTGCTATTGCTA+TGG | - | Chr3:611904-611923 | MsG0380011504.01.T01:CDS | 35.0% |
!! | TTACTAGAGAGTACTATCAC+TGG | - | Chr3:615394-615413 | MsG0380011504.01.T01:CDS | 35.0% |
!!! | AACATGGTGTTTTTGGGTAA+AGG | + | Chr3:615456-615475 | None:intergenic | 35.0% |
!!! | TTTTGATGGTTTGTTGTCCT+CGG | + | Chr3:614760-614779 | None:intergenic | 35.0% |
!!! | TTTTTTCTCTCATATGGCTG+AGG | - | Chr3:612075-612094 | MsG0380011504.01.T01:CDS | 35.0% |
AATGCAAACACTGCAAACCA+AGG | + | Chr3:616321-616340 | None:intergenic | 40.0% | |
ACAATGGACCATTGGGAAAT+TGG | - | Chr3:615935-615954 | MsG0380011504.01.T01:intron | 40.0% | |
ATGCAAACACTGCAAACCAA+GGG | + | Chr3:616320-616339 | None:intergenic | 40.0% | |
CAACGACTCTTAATAGCTTC+AGG | + | Chr3:613942-613961 | None:intergenic | 40.0% | |
CCCTGCATATTTCCAATAAG+TGG | - | Chr3:616912-616931 | MsG0380011504.01.T01:CDS | 40.0% | |
CCTACGAATCAAACACACAA+TGG | - | Chr3:614834-614853 | MsG0380011504.01.T01:intron | 40.0% | |
CTATGCTACAATGGACCATT+GGG | - | Chr3:615928-615947 | MsG0380011504.01.T01:intron | 40.0% | |
CTGAGGATGAACATGTTCTT+AGG | - | Chr3:612092-612111 | MsG0380011504.01.T01:CDS | 40.0% | |
CTTCCTCACAAATTCAAAGG+AGG | - | Chr3:613015-613034 | MsG0380011504.01.T01:CDS | 40.0% | |
CTTGATGCCCAAAACTACTT+TGG | - | Chr3:614698-614717 | MsG0380011504.01.T01:intron | 40.0% | |
GACTTCCATGTTGTCAAATG+TGG | - | Chr3:615224-615243 | MsG0380011504.01.T01:CDS | 40.0% | |
GAGCTTCTGTTAAGATCTGT+TGG | + | Chr3:614431-614450 | None:intergenic | 40.0% | |
GAGGCAGTTAAGAAATGGTT+AGG | - | Chr3:616468-616487 | MsG0380011504.01.T01:CDS | 40.0% | |
GCACCAACTGATATCAAAGA+AGG | - | Chr3:615487-615506 | MsG0380011504.01.T01:intron | 40.0% | |
GCTCAATAGTTCTTGTCATG+AGG | + | Chr3:614365-614384 | None:intergenic | 40.0% | |
GGTGATGATCGAGAAATTAC+CGG | - | Chr3:611799-611818 | MsG0380011504.01.T01:CDS | 40.0% | |
GGTGGGATGAACAAAGAATT+TGG | - | Chr3:616409-616428 | MsG0380011504.01.T01:intron | 40.0% | |
GTCTCAGGTTTAATCAGCAA+TGG | - | Chr3:613157-613176 | MsG0380011504.01.T01:CDS | 40.0% | |
TAGACGTGTTGGATCCTAAT+GGG | + | Chr3:613895-613914 | None:intergenic | 40.0% | |
TCTATGCTACAATGGACCAT+TGG | - | Chr3:615927-615946 | MsG0380011504.01.T01:intron | 40.0% | |
TCTTAGGACACAAGAATTCG+AGG | - | Chr3:612108-612127 | MsG0380011504.01.T01:CDS | 40.0% | |
TGACAGAGGCAGTTAAGAAA+TGG | - | Chr3:616463-616482 | MsG0380011504.01.T01:CDS | 40.0% | |
TGATGCCCAAAACTACTTTG+GGG | - | Chr3:614700-614719 | MsG0380011504.01.T01:intron | 40.0% | |
TTAGACGTGTTGGATCCTAA+TGG | + | Chr3:613896-613915 | None:intergenic | 40.0% | |
! | AGACTCCCCAAAGTAGTTTT+GGG | + | Chr3:614708-614727 | None:intergenic | 40.0% |
! | AGCTTTGTACATGTCTCCAA+TGG | - | Chr3:616590-616609 | MsG0380011504.01.T01:CDS | 40.0% |
! | CAAAGAAGGCATGCTTCAAT+TGG | - | Chr3:615501-615520 | MsG0380011504.01.T01:intron | 40.0% |
! | CATGTTTGGTCAACTTTTCC+TGG | - | Chr3:616689-616708 | MsG0380011504.01.T01:CDS | 40.0% |
! | CCATTGTGTGTTTGATTCGT+AGG | + | Chr3:614837-614856 | None:intergenic | 40.0% |
! | GCTAGTGTCATTAGAATCCA+TGG | + | Chr3:611713-611732 | None:intergenic | 40.0% |
! | GCTTCTGCTGTTACTCTTTT+TGG | - | Chr3:611971-611990 | MsG0380011504.01.T01:CDS | 40.0% |
! | GTCAAACAAAGCACTTGACA+CGG | - | Chr3:616515-616534 | MsG0380011504.01.T01:CDS | 40.0% |
! | TAGACTCCCCAAAGTAGTTT+TGG | + | Chr3:614709-614728 | None:intergenic | 40.0% |
! | TGTAAAGTCAAGGTGTCCTA+AGG | - | Chr3:612051-612070 | MsG0380011504.01.T01:CDS | 40.0% |
! | TTTTCAACCAAGCATACCGA+TGG | - | Chr3:611759-611778 | MsG0380011504.01.T01:three_prime_UTR | 40.0% |
!! | ATAGAGGTCATTTCTGGTGA+TGG | - | Chr3:616372-616391 | MsG0380011504.01.T01:intron | 40.0% |
!! | CCTCACAAGTCAGTTTTATG+AGG | + | Chr3:614282-614301 | None:intergenic | 40.0% |
!! | CCTCATAAAACTGACTTGTG+AGG | - | Chr3:614279-614298 | MsG0380011504.01.T01:intron | 40.0% |
!! | TAAAACTGACTTGTGAGGAG+AGG | - | Chr3:614284-614303 | MsG0380011504.01.T01:intron | 40.0% |
!! | TGACAGAGACTTGCTGATTA+AGG | - | Chr3:614127-614146 | MsG0380011504.01.T01:intron | 40.0% |
!!! | CATACGAAGATTTTTGGGGT+CGG | + | Chr3:612507-612526 | None:intergenic | 40.0% |
ACCAAGTGATTGAGGTCAAG+TGG | + | Chr3:616061-616080 | None:intergenic | 45.0% | |
ACCACTTGACCTCAATCACT+TGG | - | Chr3:616057-616076 | MsG0380011504.01.T01:CDS | 45.0% | |
ACCATTGGGAAATTGGAGGT+CGG | - | Chr3:615942-615961 | MsG0380011504.01.T01:intron | 45.0% | |
ATGGACCATTGGGAAATTGG+AGG | - | Chr3:615938-615957 | MsG0380011504.01.T01:intron | 45.0% | |
CACACAAATATGTCGAGTCC+CGG | + | Chr3:611839-611858 | None:intergenic | 45.0% | |
CAGTCCACTGCAAGTACATA+TGG | + | Chr3:613184-613203 | None:intergenic | 45.0% | |
CCACTCCACATTTGACAACA+TGG | + | Chr3:615232-615251 | None:intergenic | 45.0% | |
CCATGTTGTCAAATGTGGAG+TGG | - | Chr3:615229-615248 | MsG0380011504.01.T01:CDS | 45.0% | |
CCTCAAGTCTGCTTCTTGAA+AGG | - | Chr3:615679-615698 | MsG0380011504.01.T01:intron | 45.0% | |
CCTTTCAAGAAGCAGACTTG+AGG | + | Chr3:615682-615701 | None:intergenic | 45.0% | |
CGACCCCAAAAATCTTCGTA+TGG | - | Chr3:612505-612524 | MsG0380011504.01.T01:intron | 45.0% | |
CGAGACACATAAACAACACG+TGG | + | Chr3:612979-612998 | None:intergenic | 45.0% | |
GAGCCATTACATAGCTAACC+AGG | + | Chr3:616710-616729 | None:intergenic | 45.0% | |
GCACCTCCTTTGAATTTGTG+AGG | + | Chr3:613021-613040 | None:intergenic | 45.0% | |
GCATGCTTCAATTGGTGAAG+TGG | - | Chr3:615509-615528 | MsG0380011504.01.T01:intron | 45.0% | |
GGCAGAGAGAGACCAAATTA+AGG | - | Chr3:612129-612148 | MsG0380011504.01.T01:CDS | 45.0% | |
TATCGACGGATGAACACTTG+AGG | + | Chr3:613836-613855 | None:intergenic | 45.0% | |
TCTCACTCTTGAGCTGATCT+AGG | - | Chr3:614213-614232 | MsG0380011504.01.T01:intron | 45.0% | |
TGCTGCGAACGTTTACATTG+TGG | - | Chr3:615775-615794 | MsG0380011504.01.T01:intron | 45.0% | |
TGGACCATATGTACTTGCAG+TGG | - | Chr3:613177-613196 | MsG0380011504.01.T01:intron | 45.0% | |
TGGTGACTGATAGACCTTCT+CGG | - | Chr3:612525-612544 | MsG0380011504.01.T01:intron | 45.0% | |
TGGTTCGTGGACATAAATGG+TGG | - | Chr3:614386-614405 | MsG0380011504.01.T01:intron | 45.0% | |
TGGTTGTAGCTAAGAGTCTC+AGG | - | Chr3:613142-613161 | MsG0380011504.01.T01:CDS | 45.0% | |
! | GAACTATTGAGCTTGGTTCG+TGG | - | Chr3:614373-614392 | MsG0380011504.01.T01:intron | 45.0% |
! | GCTTGGTTCGTGGACATAAA+TGG | - | Chr3:614383-614402 | MsG0380011504.01.T01:intron | 45.0% |
! | TCGTGGACATAAATGGTGGA+TGG | - | Chr3:614390-614409 | MsG0380011504.01.T01:intron | 45.0% |
!! | ATGGCTTGTTTGGCTGAAGA+TGG | + | Chr3:613226-613245 | None:intergenic | 45.0% |
!! | AAATTTGAAAAATAAAAATA+GGG | - | Chr3:616159-616178 | MsG0380011504.01.T01:intron | 5.0% |
ACAATGTGGCAAGGGATGGA+TGG | - | Chr3:613483-613502 | MsG0380011504.01.T01:intron | 50.0% | |
ATGGATGGTTTGAGAGGTCC+GGG | - | Chr3:613498-613517 | MsG0380011504.01.T01:intron | 50.0% | |
ATGGCTCAGTGTCAATGTGG+TGG | - | Chr3:616391-616410 | MsG0380011504.01.T01:intron | 50.0% | |
CAAGGGATGGATGGTTTGAG+AGG | - | Chr3:613492-613511 | MsG0380011504.01.T01:intron | 50.0% | |
CCATTGGGAAATTGGAGGTC+GGG | - | Chr3:615943-615962 | MsG0380011504.01.T01:intron | 50.0% | |
GATGGATGGTTTGAGAGGTC+CGG | - | Chr3:613497-613516 | MsG0380011504.01.T01:intron | 50.0% | |
GGATTTACCTCGATCCGAGA+AGG | + | Chr3:612542-612561 | None:intergenic | 50.0% | |
GGTGCACACCCTAAGAAACA+TGG | + | Chr3:615472-615491 | None:intergenic | 50.0% | |
GTGATGGCTCAGTGTCAATG+TGG | - | Chr3:616388-616407 | MsG0380011504.01.T01:intron | 50.0% | |
TCAACCAAGCATACCGATGG+AGG | - | Chr3:611762-611781 | MsG0380011504.01.T01:three_prime_UTR | 50.0% | |
TCAGACAATGTGGCAAGGGA+TGG | - | Chr3:613479-613498 | MsG0380011504.01.T01:intron | 50.0% | |
TGATAGACCTTCTCGGATCG+AGG | - | Chr3:612532-612551 | MsG0380011504.01.T01:intron | 50.0% | |
TGGCTCAGTGTCAATGTGGT+GGG | - | Chr3:616392-616411 | MsG0380011504.01.T01:intron | 50.0% | |
TGTTACAGGTCACAGACCCT+TGG | - | Chr3:616301-616320 | MsG0380011504.01.T01:intron | 50.0% | |
TTACCACTGCCAGAAAGACC+CGG | + | Chr3:613519-613538 | None:intergenic | 50.0% | |
! | ATCATCACCGATCGACTCAC+CGG | + | Chr3:611788-611807 | None:intergenic | 50.0% |
! | GAACTTGTGGTTGGTGTGCT+TGG | - | Chr3:614248-614267 | MsG0380011504.01.T01:intron | 50.0% |
!! | AGGAGGTGCCCTCAATACAT+TGG | - | Chr3:613032-613051 | MsG0380011504.01.T01:CDS | 50.0% |
!! | GATGGTTTGTTGTCCTCGGA+TGG | + | Chr3:614756-614775 | None:intergenic | 50.0% |
ACCGGCTGACGAGAAGTTAC+CGG | - | Chr3:611817-611836 | MsG0380011504.01.T01:CDS | 55.0% | |
CCCGACCTCCAATTTCCCAA+TGG | + | Chr3:615946-615965 | None:intergenic | 55.0% | |
GAATCACTCAAGGCCATCCG+AGG | - | Chr3:614740-614759 | MsG0380011504.01.T01:intron | 55.0% | |
TTGAGAGGTCCGGGTCTTTC+TGG | - | Chr3:613507-613526 | MsG0380011504.01.T01:intron | 55.0% | |
TTGGGAAATTGGAGGTCGGG+TGG | - | Chr3:615946-615965 | MsG0380011504.01.T01:intron | 55.0% | |
ATGGAGGCCGGTGAGTCGAT+CGG | - | Chr3:611778-611797 | MsG0380011504.01.T01:exon | 60.0% | |
CCAAGCATACCGATGGAGGC+CGG | - | Chr3:611766-611785 | MsG0380011504.01.T01:exon | 60.0% | |
CCCGGTAACTTCTCGTCAGC+CGG | + | Chr3:611821-611840 | None:intergenic | 60.0% | |
CCGGCTGACGAGAAGTTACC+GGG | - | Chr3:611818-611837 | MsG0380011504.01.T01:CDS | 60.0% | |
! | ATCGACTCACCGGCCTCCAT+CGG | + | Chr3:611778-611797 | None:intergenic | 60.0% |
CCGGCCTCCATCGGTATGCT+TGG | + | Chr3:611769-611788 | None:intergenic | 65.0% | |
! | GGTCCGGGTCTTTCTGGCAG+TGG | - | Chr3:613513-613532 | MsG0380011504.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 611425 | 617141 | 611425 | ID=MsG0380011504.01;Name=MsG0380011504.01 |
Chr3 | mRNA | 611425 | 617141 | 611425 | ID=MsG0380011504.01.T01;Parent=MsG0380011504.01;Name=MsG0380011504.01.T01;_AED=0.28;_eAED=0.28;_QI=153|1|1|1|1|1|8|359|694 |
Chr3 | exon | 616416 | 617141 | 616416 | ID=MsG0380011504.01.T01:exon:38;Parent=MsG0380011504.01.T01 |
Chr3 | exon | 616013 | 616105 | 616013 | ID=MsG0380011504.01.T01:exon:39;Parent=MsG0380011504.01.T01 |
Chr3 | exon | 615513 | 615614 | 615513 | ID=MsG0380011504.01.T01:exon:40;Parent=MsG0380011504.01.T01 |
Chr3 | exon | 615203 | 615415 | 615203 | ID=MsG0380011504.01.T01:exon:41;Parent=MsG0380011504.01.T01 |
Chr3 | exon | 614981 | 615083 | 614981 | ID=MsG0380011504.01.T01:exon:42;Parent=MsG0380011504.01.T01 |
Chr3 | exon | 613701 | 613879 | 613701 | ID=MsG0380011504.01.T01:exon:43;Parent=MsG0380011504.01.T01 |
Chr3 | exon | 612846 | 613193 | 612846 | ID=MsG0380011504.01.T01:exon:44;Parent=MsG0380011504.01.T01 |
Chr3 | exon | 611425 | 612257 | 611425 | ID=MsG0380011504.01.T01:exon:45;Parent=MsG0380011504.01.T01 |
Chr3 | five_prime_UTR | 616989 | 617141 | 616989 | ID=MsG0380011504.01.T01:five_prime_utr;Parent=MsG0380011504.01.T01 |
Chr3 | CDS | 616416 | 616988 | 616416 | ID=MsG0380011504.01.T01:cds;Parent=MsG0380011504.01.T01 |
Chr3 | CDS | 616013 | 616105 | 616013 | ID=MsG0380011504.01.T01:cds;Parent=MsG0380011504.01.T01 |
Chr3 | CDS | 615513 | 615614 | 615513 | ID=MsG0380011504.01.T01:cds;Parent=MsG0380011504.01.T01 |
Chr3 | CDS | 615203 | 615415 | 615203 | ID=MsG0380011504.01.T01:cds;Parent=MsG0380011504.01.T01 |
Chr3 | CDS | 614981 | 615083 | 614981 | ID=MsG0380011504.01.T01:cds;Parent=MsG0380011504.01.T01 |
Chr3 | CDS | 613701 | 613879 | 613701 | ID=MsG0380011504.01.T01:cds;Parent=MsG0380011504.01.T01 |
Chr3 | CDS | 612846 | 613193 | 612846 | ID=MsG0380011504.01.T01:cds;Parent=MsG0380011504.01.T01 |
Chr3 | CDS | 611784 | 612257 | 611784 | ID=MsG0380011504.01.T01:cds;Parent=MsG0380011504.01.T01 |
Chr3 | three_prime_UTR | 611425 | 611783 | 611425 | ID=MsG0380011504.01.T01:three_prime_utr;Parent=MsG0380011504.01.T01 |
Gene Sequence |
Protein sequence |