Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018092.01.T01 | KAH0982213.1 | 69.355 | 248 | 41 | 3 | 3 | 249 | 130 | 343 | 2.35E-115 | 346 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018092.01.T01 | Q9MB42 | 86.508 | 126 | 13 | 1 | 125 | 246 | 401 | 526 | 7.17E-66 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018092.01.T01 | A0A540LCQ2 | 63.830 | 235 | 60 | 5 | 3 | 213 | 130 | 363 | 3.21e-94 | 291 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380011504.01 | MsG0480018092.01 | 0.827514 | 1.500469e-54 | 1.451689e-51 |
| MsG0480018092.01 | MsG0480018093.01 | 0.968151 | 2.855181e-128 | 2.313505e-122 |
| MsG0480018092.01 | MsG0480018096.01 | 0.877288 | 7.088685e-69 | 3.545373e-65 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018092.01.T01 | MTR_4g005190 | 93.651 | 126 | 4 | 1 | 125 | 246 | 401 | 526 | 3.39e-74 | 238 |
| MsG0480018092.01.T01 | MTR_4g005190 | 88.421 | 95 | 10 | 1 | 3 | 96 | 130 | 224 | 2.11e-51 | 177 |
| MsG0480018092.01.T01 | MTR_4g005190 | 93.651 | 126 | 4 | 1 | 125 | 246 | 401 | 526 | 1.36e-73 | 239 |
| MsG0480018092.01.T01 | MTR_4g005190 | 88.421 | 95 | 10 | 1 | 3 | 96 | 130 | 224 | 3.55e-51 | 178 |
| MsG0480018092.01.T01 | MTR_7g034535 | 84.127 | 126 | 16 | 1 | 125 | 246 | 336 | 461 | 9.05e-66 | 217 |
| MsG0480018092.01.T01 | MTR_7g034535 | 84.211 | 95 | 14 | 1 | 3 | 96 | 65 | 159 | 2.29e-47 | 167 |
| MsG0480018092.01.T01 | MTR_3g436160 | 82.540 | 126 | 18 | 1 | 125 | 246 | 340 | 465 | 2.10e-65 | 216 |
| MsG0480018092.01.T01 | MTR_3g436160 | 80.000 | 95 | 18 | 1 | 3 | 96 | 73 | 167 | 1.78e-44 | 159 |
| MsG0480018092.01.T01 | MTR_4g005270 | 80.952 | 126 | 20 | 1 | 125 | 246 | 401 | 526 | 2.24e-62 | 209 |
| MsG0480018092.01.T01 | MTR_4g005270 | 86.316 | 95 | 12 | 1 | 3 | 96 | 130 | 224 | 4.08e-49 | 172 |
| MsG0480018092.01.T01 | MTR_0013s0230 | 79.365 | 126 | 22 | 1 | 125 | 246 | 401 | 526 | 1.26e-60 | 204 |
| MsG0480018092.01.T01 | MTR_0013s0230 | 82.105 | 95 | 16 | 1 | 3 | 96 | 130 | 224 | 1.10e-46 | 166 |
| MsG0480018092.01.T01 | MTR_8g017020 | 76.190 | 126 | 26 | 1 | 125 | 246 | 367 | 492 | 4.34e-59 | 199 |
| MsG0480018092.01.T01 | MTR_8g017020 | 79.012 | 81 | 17 | 0 | 3 | 83 | 96 | 176 | 1.04e-41 | 151 |
| MsG0480018092.01.T01 | MTR_8g016975 | 74.603 | 126 | 28 | 1 | 125 | 246 | 401 | 526 | 1.86e-57 | 195 |
| MsG0480018092.01.T01 | MTR_8g016975 | 81.481 | 81 | 15 | 0 | 3 | 83 | 130 | 210 | 9.02e-43 | 155 |
| MsG0480018092.01.T01 | MTR_6g093180 | 61.654 | 133 | 47 | 1 | 125 | 253 | 398 | 530 | 7.80e-48 | 169 |
| MsG0480018092.01.T01 | MTR_6g093180 | 64.198 | 81 | 29 | 0 | 3 | 83 | 128 | 208 | 3.82e-30 | 119 |
| MsG0480018092.01.T01 | MTR_8g016960 | 71.296 | 108 | 27 | 1 | 125 | 228 | 395 | 502 | 1.66e-46 | 165 |
| MsG0480018092.01.T01 | MTR_8g016960 | 75.000 | 76 | 19 | 0 | 8 | 83 | 129 | 204 | 1.12e-35 | 134 |
| MsG0480018092.01.T01 | MTR_6g035010 | 57.143 | 133 | 53 | 1 | 125 | 253 | 398 | 530 | 1.68e-45 | 162 |
| MsG0480018092.01.T01 | MTR_6g035010 | 61.728 | 81 | 31 | 0 | 3 | 83 | 128 | 208 | 4.68e-27 | 110 |
| MsG0480018092.01.T01 | MTR_6g034985 | 55.224 | 134 | 56 | 1 | 124 | 253 | 397 | 530 | 1.16e-43 | 157 |
| MsG0480018092.01.T01 | MTR_6g034985 | 59.259 | 81 | 33 | 0 | 3 | 83 | 128 | 208 | 1.41e-26 | 108 |
| MsG0480018092.01.T01 | MTR_5g008810 | 54.545 | 132 | 53 | 2 | 121 | 245 | 392 | 523 | 1.01e-39 | 146 |
| MsG0480018092.01.T01 | MTR_5g008810 | 52.632 | 95 | 43 | 2 | 3 | 96 | 129 | 222 | 1.07e-23 | 100 |
| MsG0480018092.01.T01 | MTR_6g088140 | 44.920 | 187 | 86 | 5 | 74 | 245 | 323 | 507 | 5.57e-36 | 135 |
| MsG0480018092.01.T01 | MTR_6g088140 | 53.846 | 78 | 35 | 1 | 3 | 80 | 113 | 189 | 1.38e-21 | 94.0 |
| MsG0480018092.01.T01 | MTR_6g088140 | 44.920 | 187 | 86 | 5 | 74 | 245 | 323 | 507 | 5.63e-36 | 135 |
| MsG0480018092.01.T01 | MTR_6g088140 | 53.846 | 78 | 35 | 1 | 3 | 80 | 113 | 189 | 1.27e-21 | 94.4 |
| MsG0480018092.01.T01 | MTR_6g093100 | 44.920 | 187 | 86 | 5 | 74 | 245 | 349 | 533 | 1.04e-35 | 135 |
| MsG0480018092.01.T01 | MTR_6g093100 | 53.846 | 78 | 35 | 1 | 3 | 80 | 139 | 215 | 2.13e-21 | 93.6 |
| MsG0480018092.01.T01 | MTR_7g062020 | 42.328 | 189 | 88 | 4 | 74 | 245 | 350 | 534 | 5.68e-34 | 130 |
| MsG0480018092.01.T01 | MTR_7g062020 | 51.282 | 78 | 37 | 1 | 3 | 80 | 140 | 216 | 6.96e-20 | 89.0 |
| MsG0480018092.01.T01 | MTR_8g016940 | 80.000 | 35 | 7 | 0 | 211 | 245 | 2 | 36 | 1.64e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018092.01.T01 | AT1G78950 | 71.429 | 126 | 32 | 1 | 125 | 246 | 411 | 536 | 1.07e-54 | 188 |
| MsG0480018092.01.T01 | AT1G78950 | 76.842 | 95 | 21 | 1 | 3 | 96 | 140 | 234 | 8.26e-43 | 155 |
| MsG0480018092.01.T01 | AT1G78950 | 71.429 | 126 | 32 | 1 | 125 | 246 | 402 | 527 | 1.14e-54 | 187 |
| MsG0480018092.01.T01 | AT1G78950 | 76.842 | 95 | 21 | 1 | 3 | 96 | 131 | 225 | 7.74e-43 | 155 |
| MsG0480018092.01.T01 | AT1G78960 | 67.717 | 127 | 37 | 1 | 124 | 246 | 250 | 376 | 1.35e-53 | 183 |
| MsG0480018092.01.T01 | AT1G78960 | 69.014 | 71 | 21 | 1 | 24 | 93 | 1 | 71 | 8.55e-26 | 106 |
| MsG0480018092.01.T01 | AT1G78955 | 66.667 | 126 | 38 | 1 | 125 | 246 | 227 | 352 | 4.81e-53 | 181 |
| MsG0480018092.01.T01 | AT1G78955 | 66.667 | 126 | 38 | 1 | 125 | 246 | 337 | 462 | 5.56e-53 | 181 |
| MsG0480018092.01.T01 | AT1G78955 | 75.309 | 81 | 20 | 0 | 3 | 83 | 66 | 146 | 8.44e-32 | 123 |
| MsG0480018092.01.T01 | AT1G78960 | 67.717 | 127 | 37 | 1 | 124 | 246 | 401 | 527 | 7.50e-53 | 182 |
| MsG0480018092.01.T01 | AT1G78960 | 69.565 | 92 | 27 | 1 | 3 | 93 | 131 | 222 | 1.32e-37 | 140 |
| MsG0480018092.01.T01 | AT1G78960 | 67.717 | 127 | 37 | 1 | 124 | 246 | 401 | 527 | 7.53e-53 | 183 |
| MsG0480018092.01.T01 | AT1G78960 | 69.565 | 92 | 27 | 1 | 3 | 93 | 131 | 222 | 1.50e-37 | 140 |
| MsG0480018092.01.T01 | AT1G78960 | 67.717 | 127 | 37 | 1 | 124 | 246 | 401 | 527 | 7.53e-53 | 183 |
| MsG0480018092.01.T01 | AT1G78960 | 69.565 | 92 | 27 | 1 | 3 | 93 | 131 | 222 | 1.50e-37 | 140 |
| MsG0480018092.01.T01 | AT1G78960 | 67.717 | 127 | 37 | 1 | 124 | 246 | 401 | 527 | 7.53e-53 | 183 |
| MsG0480018092.01.T01 | AT1G78960 | 69.565 | 92 | 27 | 1 | 3 | 93 | 131 | 222 | 1.50e-37 | 140 |
| MsG0480018092.01.T01 | AT1G78970 | 68.254 | 126 | 36 | 1 | 125 | 246 | 399 | 524 | 1.05e-52 | 182 |
| MsG0480018092.01.T01 | AT1G78970 | 69.231 | 78 | 21 | 1 | 3 | 80 | 131 | 205 | 2.35e-31 | 122 |
| MsG0480018092.01.T01 | AT1G78970 | 68.254 | 126 | 36 | 1 | 125 | 246 | 399 | 524 | 1.05e-52 | 182 |
| MsG0480018092.01.T01 | AT1G78970 | 69.231 | 78 | 21 | 1 | 3 | 80 | 131 | 205 | 2.35e-31 | 122 |
| MsG0480018092.01.T01 | AT1G78970 | 68.254 | 126 | 36 | 1 | 125 | 246 | 399 | 524 | 1.05e-52 | 182 |
| MsG0480018092.01.T01 | AT1G78970 | 69.231 | 78 | 21 | 1 | 3 | 80 | 131 | 205 | 2.35e-31 | 122 |
| MsG0480018092.01.T01 | AT1G78955 | 66.667 | 126 | 38 | 1 | 125 | 246 | 337 | 462 | 1.29e-52 | 181 |
| MsG0480018092.01.T01 | AT1G78955 | 75.309 | 81 | 20 | 0 | 3 | 83 | 66 | 146 | 8.22e-32 | 123 |
| MsG0480018092.01.T01 | AT1G78955 | 66.667 | 126 | 38 | 1 | 125 | 246 | 337 | 462 | 1.52e-52 | 181 |
| MsG0480018092.01.T01 | AT1G78955 | 75.309 | 81 | 20 | 0 | 3 | 83 | 66 | 146 | 8.44e-32 | 123 |
| MsG0480018092.01.T01 | AT1G78955 | 66.667 | 126 | 38 | 1 | 125 | 246 | 402 | 527 | 3.27e-52 | 181 |
| MsG0480018092.01.T01 | AT1G78955 | 75.309 | 81 | 20 | 0 | 3 | 83 | 131 | 211 | 9.37e-32 | 123 |
| MsG0480018092.01.T01 | AT1G66960 | 61.194 | 134 | 48 | 1 | 124 | 253 | 401 | 534 | 6.54e-48 | 169 |
| MsG0480018092.01.T01 | AT1G66960 | 74.074 | 81 | 21 | 0 | 3 | 83 | 131 | 211 | 3.24e-36 | 136 |
| MsG0480018092.01.T01 | AT1G66960 | 61.194 | 134 | 48 | 1 | 124 | 253 | 401 | 534 | 6.54e-48 | 169 |
| MsG0480018092.01.T01 | AT1G66960 | 74.074 | 81 | 21 | 0 | 3 | 83 | 131 | 211 | 3.24e-36 | 136 |
| MsG0480018092.01.T01 | AT1G66960 | 61.194 | 134 | 48 | 1 | 124 | 253 | 401 | 534 | 6.54e-48 | 169 |
| MsG0480018092.01.T01 | AT1G66960 | 74.074 | 81 | 21 | 0 | 3 | 83 | 131 | 211 | 3.24e-36 | 136 |
| MsG0480018092.01.T01 | AT1G66960 | 61.194 | 134 | 48 | 1 | 124 | 253 | 410 | 543 | 7.04e-48 | 169 |
| MsG0480018092.01.T01 | AT1G66960 | 74.074 | 81 | 21 | 0 | 3 | 83 | 140 | 220 | 2.90e-36 | 136 |
| MsG0480018092.01.T01 | AT2G07050 | 55.303 | 132 | 52 | 2 | 121 | 245 | 301 | 432 | 1.41e-40 | 148 |
| MsG0480018092.01.T01 | AT2G07050 | 53.086 | 81 | 37 | 1 | 3 | 83 | 38 | 117 | 5.89e-23 | 98.2 |
| MsG0480018092.01.T01 | AT2G07050 | 55.303 | 132 | 52 | 2 | 121 | 245 | 392 | 523 | 2.71e-40 | 148 |
| MsG0480018092.01.T01 | AT2G07050 | 53.086 | 81 | 37 | 1 | 3 | 83 | 129 | 208 | 3.63e-23 | 98.6 |
| MsG0480018092.01.T01 | AT5G36150 | 50.394 | 127 | 59 | 1 | 124 | 246 | 401 | 527 | 1.71e-39 | 145 |
| MsG0480018092.01.T01 | AT5G36150 | 60.000 | 95 | 37 | 1 | 3 | 96 | 131 | 225 | 2.67e-32 | 125 |
| MsG0480018092.01.T01 | AT5G36150 | 50.394 | 127 | 59 | 1 | 124 | 246 | 401 | 527 | 1.71e-39 | 145 |
| MsG0480018092.01.T01 | AT5G36150 | 60.000 | 95 | 37 | 1 | 3 | 96 | 131 | 225 | 2.67e-32 | 125 |
| MsG0480018092.01.T01 | AT3G29255 | 37.019 | 208 | 119 | 4 | 48 | 246 | 269 | 473 | 7.31e-36 | 135 |
| MsG0480018092.01.T01 | AT3G29255 | 63.265 | 49 | 17 | 1 | 33 | 80 | 106 | 154 | 3.68e-14 | 72.4 |
| MsG0480018092.01.T01 | AT1G78500 | 49.618 | 131 | 58 | 2 | 125 | 247 | 404 | 534 | 8.19e-36 | 135 |
| MsG0480018092.01.T01 | AT1G78500 | 61.446 | 83 | 30 | 1 | 3 | 83 | 131 | 213 | 7.95e-29 | 115 |
| MsG0480018092.01.T01 | AT1G78500 | 49.618 | 131 | 58 | 2 | 125 | 247 | 404 | 534 | 8.19e-36 | 135 |
| MsG0480018092.01.T01 | AT1G78500 | 61.446 | 83 | 30 | 1 | 3 | 83 | 131 | 213 | 7.95e-29 | 115 |
| MsG0480018092.01.T01 | AT5G48010 | 48.872 | 133 | 60 | 2 | 122 | 246 | 400 | 532 | 1.67e-35 | 134 |
| MsG0480018092.01.T01 | AT5G48010 | 56.701 | 97 | 38 | 3 | 3 | 96 | 131 | 226 | 6.90e-28 | 112 |
| MsG0480018092.01.T01 | AT5G48010 | 48.872 | 133 | 60 | 2 | 122 | 246 | 400 | 532 | 1.82e-35 | 134 |
| MsG0480018092.01.T01 | AT5G48010 | 56.701 | 97 | 38 | 3 | 3 | 96 | 131 | 226 | 7.49e-28 | 112 |
| MsG0480018092.01.T01 | AT4G15370 | 46.154 | 130 | 63 | 2 | 124 | 246 | 405 | 534 | 3.91e-35 | 133 |
| MsG0480018092.01.T01 | AT4G15370 | 62.195 | 82 | 30 | 1 | 3 | 83 | 131 | 212 | 1.19e-28 | 114 |
| MsG0480018092.01.T01 | AT4G15370 | 46.154 | 130 | 63 | 2 | 124 | 246 | 402 | 531 | 4.20e-35 | 133 |
| MsG0480018092.01.T01 | AT4G15370 | 62.195 | 82 | 30 | 1 | 3 | 83 | 131 | 212 | 1.22e-28 | 114 |
| MsG0480018092.01.T01 | AT5G42600 | 46.457 | 127 | 64 | 1 | 124 | 246 | 402 | 528 | 9.26e-35 | 132 |
| MsG0480018092.01.T01 | AT5G42600 | 67.073 | 82 | 26 | 1 | 3 | 83 | 131 | 212 | 7.05e-31 | 121 |
| MsG0480018092.01.T01 | AT4G15340 | 50.769 | 130 | 57 | 2 | 124 | 246 | 403 | 532 | 2.08e-34 | 130 |
| MsG0480018092.01.T01 | AT4G15340 | 59.036 | 83 | 32 | 1 | 3 | 83 | 131 | 213 | 4.34e-28 | 112 |
| MsG0480018092.01.T01 | AT4G15340 | 50.769 | 130 | 57 | 2 | 124 | 246 | 403 | 532 | 3.56e-34 | 130 |
| MsG0480018092.01.T01 | AT4G15340 | 59.036 | 83 | 32 | 1 | 3 | 83 | 131 | 213 | 4.53e-28 | 112 |
| MsG0480018092.01.T01 | AT1G78480 | 71.875 | 64 | 18 | 0 | 10 | 73 | 114 | 177 | 2.58e-28 | 107 |
| MsG0480018092.01.T01 | AT3G45130 | 46.715 | 137 | 68 | 1 | 125 | 256 | 398 | 534 | 5.32e-25 | 103 |
| MsG0480018092.01.T01 | AT3G45130 | 54.321 | 81 | 36 | 1 | 3 | 83 | 129 | 208 | 2.36e-22 | 96.3 |
| MsG0480018092.01.T01 | AT3G45130 | 46.715 | 137 | 68 | 1 | 125 | 256 | 398 | 534 | 5.32e-25 | 103 |
| MsG0480018092.01.T01 | AT3G45130 | 54.321 | 81 | 36 | 1 | 3 | 83 | 129 | 208 | 2.36e-22 | 96.3 |
| MsG0480018092.01.T01 | AT3G45130 | 46.715 | 137 | 68 | 1 | 125 | 256 | 398 | 534 | 5.78e-25 | 103 |
| MsG0480018092.01.T01 | AT3G45130 | 54.321 | 81 | 36 | 1 | 3 | 83 | 129 | 208 | 2.20e-22 | 96.3 |
| MsG0480018092.01.T01 | AT3G45130 | 46.715 | 137 | 68 | 1 | 125 | 256 | 398 | 534 | 5.78e-25 | 103 |
| MsG0480018092.01.T01 | AT3G45130 | 54.321 | 81 | 36 | 1 | 3 | 83 | 129 | 208 | 2.20e-22 | 96.3 |
| MsG0480018092.01.T01 | AT3G45130 | 46.715 | 137 | 68 | 1 | 125 | 256 | 398 | 534 | 5.78e-25 | 103 |
| MsG0480018092.01.T01 | AT3G45130 | 54.321 | 81 | 36 | 1 | 3 | 83 | 129 | 208 | 2.20e-22 | 96.3 |
Find 60 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTAGTTAAATGTTTA+TGG | 0.079150 | 4:-150843 | None:intergenic |
| ACCGAATCATATAACCTTTC+TGG | 0.131846 | 4:-150776 | None:intergenic |
| ATCTCTTTGCGATGCTCTTT+TGG | 0.182107 | 4:-148613 | None:intergenic |
| CAATGTCTTGTTGTCGCTTC+AGG | 0.287718 | 4:+150799 | MsG0480018092.01.T01:CDS |
| ATGTGCTCGAATCCAGTTTC+TGG | 0.317080 | 4:-148872 | None:intergenic |
| CTTGATGAAATCATGTCCTT+TGG | 0.340627 | 4:-150154 | None:intergenic |
| TGACATCCACAAAAGTAATC+TGG | 0.349647 | 4:-149850 | None:intergenic |
| CAGGTTACAGAGAACCCTTC+TGG | 0.354363 | 4:+150508 | MsG0480018092.01.T01:intron |
| GCAAAACCAGCATCCCTTCT+TGG | 0.362033 | 4:-150078 | None:intergenic |
| CAGGTTCGATTTCATCATTT+AGG | 0.371564 | 4:-150125 | None:intergenic |
| TATATATGTATGCGAATTCT+CGG | 0.404110 | 4:+148808 | MsG0480018092.01.T01:CDS |
| GTGTCACATATATACCTTCA+TGG | 0.405208 | 4:+148898 | MsG0480018092.01.T01:CDS |
| CTTGTGCTAGAGCCAGAAAC+TGG | 0.419488 | 4:+148860 | MsG0480018092.01.T01:CDS |
| TGAAGAATGAAGATGGAGGA+TGG | 0.433957 | 4:+148737 | MsG0480018092.01.T01:intron |
| GTATTATGTATGCTTGCTGT+TGG | 0.447067 | 4:+149779 | MsG0480018092.01.T01:CDS |
| ACCAGAAAGGTTATATGATT+CGG | 0.449257 | 4:+150775 | MsG0480018092.01.T01:CDS |
| TTCTTGTAAGCATCTCCATT+TGG | 0.455730 | 4:-149811 | None:intergenic |
| TCATGTCCTTTGGCAAGTGC+AGG | 0.480763 | 4:-150144 | None:intergenic |
| CAAACCTTCAGCGGTGCAAT+CGG | 0.485259 | 4:-150608 | None:intergenic |
| ATGCATCGTCATATTTCTAA+AGG | 0.486909 | 4:+150544 | MsG0480018092.01.T01:CDS |
| GAAGAATGAAGATGGAGGAT+GGG | 0.493389 | 4:+148738 | MsG0480018092.01.T01:intron |
| TTGCACCGCTGAAGGTTTGA+AGG | 0.495837 | 4:+150612 | MsG0480018092.01.T01:CDS |
| GTCATATTTCTAAAGGCTCA+TGG | 0.498248 | 4:+150551 | MsG0480018092.01.T01:CDS |
| GCATTGTCTTGACCGCCATC+AGG | 0.500377 | 4:-148838 | None:intergenic |
| AAGAATGAAGATGGAGGATG+GGG | 0.503155 | 4:+148739 | MsG0480018092.01.T01:intron |
| TGGTAGCCAAGAAGGGATGC+TGG | 0.504317 | 4:+150072 | MsG0480018092.01.T01:intron |
| TATTATGTATGCTTGCTGTT+GGG | 0.505507 | 4:+149780 | MsG0480018092.01.T01:CDS |
| TATGTATGCTTGCTGTTGGG+TGG | 0.520817 | 4:+149783 | MsG0480018092.01.T01:CDS |
| GACATCCACAAAAGTAATCT+GGG | 0.533440 | 4:-149849 | None:intergenic |
| ATGTTGCCTCCAGAGATTGT+GGG | 0.536709 | 4:+150740 | MsG0480018092.01.T01:CDS |
| TGATTTCATCAAGAAATCTC+AGG | 0.542468 | 4:+150164 | MsG0480018092.01.T01:CDS |
| GATTTCATCATTTAGGTTAG+CGG | 0.544741 | 4:-150118 | None:intergenic |
| AGCGGCAAGCAAAGCTTGAA+CGG | 0.546876 | 4:-150100 | None:intergenic |
| TCCATGGTCTTGATCGGAGA+AGG | 0.549309 | 4:-150575 | None:intergenic |
| TGTCACATATATACCTTCAT+GGG | 0.555623 | 4:+148899 | MsG0480018092.01.T01:CDS |
| AATGTTGCCTCCAGAGATTG+TGG | 0.556294 | 4:+150739 | MsG0480018092.01.T01:CDS |
| TCTCCGATCAAGACCATGGA+TGG | 0.556637 | 4:+150578 | MsG0480018092.01.T01:CDS |
| AATCGGAAACTTGCCATCCA+TGG | 0.561165 | 4:-150591 | None:intergenic |
| GAATACGGAATCAAGATGTC+CGG | 0.564924 | 4:-148590 | None:intergenic |
| TTGCCATCCATGGTCTTGAT+CGG | 0.566795 | 4:-150581 | None:intergenic |
| ATACTCTTAAAATCTCCAGA+AGG | 0.567112 | 4:-150523 | None:intergenic |
| GTTTCCGATTGCACCGCTGA+AGG | 0.573268 | 4:+150604 | MsG0480018092.01.T01:CDS |
| ATCGAACCTGCACTTGCCAA+AGG | 0.594240 | 4:+150138 | MsG0480018092.01.T01:CDS |
| TACTCTTAAAATCTCCAGAA+GGG | 0.594668 | 4:-150522 | None:intergenic |
| CTATACCTTCAAACCTTCAG+CGG | 0.599781 | 4:-150617 | None:intergenic |
| ACCTTCTCCGATCAAGACCA+TGG | 0.607623 | 4:+150574 | MsG0480018092.01.T01:CDS |
| GTTAAGTGCAGTGCAAAACA+TGG | 0.609215 | 4:-148785 | None:intergenic |
| CTTACAAGAAGCATCTTGCA+AGG | 0.611846 | 4:+149824 | MsG0480018092.01.T01:CDS |
| TGTATGCGAATTCTCGGAGA+AGG | 0.611987 | 4:+148814 | MsG0480018092.01.T01:CDS |
| AGAAGATGGAATGACCATGC+AGG | 0.618756 | 4:+149872 | MsG0480018092.01.T01:CDS |
| TGTTGCCTCCAGAGATTGTG+GGG | 0.619714 | 4:+150741 | MsG0480018092.01.T01:CDS |
| AGGATGGGGACTACACATTG+AGG | 0.622564 | 4:+148753 | MsG0480018092.01.T01:CDS |
| GGATGGGGACTACACATTGA+GGG | 0.630262 | 4:+148754 | MsG0480018092.01.T01:CDS |
| GGGAAAAGATGGAACCAGAA+AGG | 0.633031 | 4:+150762 | MsG0480018092.01.T01:CDS |
| ATTCTCGGAGAAGGACCTGA+TGG | 0.634214 | 4:+148823 | MsG0480018092.01.T01:CDS |
| ATATATATAATATACCTGCA+TGG | 0.657787 | 4:-149886 | None:intergenic |
| TTACAAGAAGCATCTTGCAA+GGG | 0.667050 | 4:+149825 | MsG0480018092.01.T01:CDS |
| CTCGGAGAAGGACCTGATGG+CGG | 0.670908 | 4:+148826 | MsG0480018092.01.T01:CDS |
| TGTTGGGTGGAAGATCCAAA+TGG | 0.676963 | 4:+149796 | MsG0480018092.01.T01:CDS |
| GTTGCCTCCAGAGATTGTGG+GGG | 0.736124 | 4:+150742 | MsG0480018092.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATATTATGTTAAAG+AGG | - | Chr4:149426-149445 | None:intergenic | 10.0% |
| !! | CTTTAACATAATATAATAAT+AGG | + | Chr4:149426-149445 | MsG0480018092.01.T01:intron | 10.0% |
| !! | AACATAATATAATAATAGGA+GGG | + | Chr4:149430-149449 | MsG0480018092.01.T01:intron | 15.0% |
| !! | AATTAGGACATATTTATTAT+TGG | + | Chr4:150408-150427 | MsG0480018092.01.T01:intron | 15.0% |
| !! | AATTAGTTAATGAGATATTT+AGG | + | Chr4:150257-150276 | MsG0480018092.01.T01:intron | 15.0% |
| !! | AGTTATTAATCAATATTACT+TGG | - | Chr4:150365-150384 | None:intergenic | 15.0% |
| !! | ATTAGTAACATAAATATGTT+CGG | - | Chr4:148977-148996 | None:intergenic | 15.0% |
| !! | TAACATAATATAATAATAGG+AGG | + | Chr4:149429-149448 | MsG0480018092.01.T01:intron | 15.0% |
| !!! | TCATCCTAATTTAATTTAAT+TGG | + | Chr4:149189-149208 | MsG0480018092.01.T01:intron | 15.0% |
| !! | AAGTGAATTAGTAAATAAGA+AGG | - | Chr4:150291-150310 | None:intergenic | 20.0% |
| !! | AATAATATGCGAAAGAATTA+TGG | + | Chr4:149140-149159 | MsG0480018092.01.T01:intron | 20.0% |
| !! | AGAAATTCAAAGAATTAAAC+TGG | - | Chr4:149098-149117 | None:intergenic | 20.0% |
| !! | ATATATATAATATACCTGCA+TGG | - | Chr4:149889-149908 | None:intergenic | 20.0% |
| !!! | CATTTACATGTATAATTTTC+AGG | + | Chr4:149757-149776 | MsG0480018092.01.T01:intron | 20.0% |
| !!! | TTCTATTATGCTAATCTTTT+TGG | + | Chr4:149114-149133 | MsG0480018092.01.T01:intron | 20.0% |
| ! | AATAGCTATACTTAACCATT+GGG | + | Chr4:149634-149653 | MsG0480018092.01.T01:intron | 25.0% |
| ! | AATTAGTAAATAAGAAGGAG+AGG | - | Chr4:150286-150305 | None:intergenic | 25.0% |
| ! | ATTAGTAAATAAGAAGGAGA+GGG | - | Chr4:150285-150304 | None:intergenic | 25.0% |
| ! | CGATCATTGAATGTTAATAA+AGG | + | Chr4:150680-150699 | MsG0480018092.01.T01:intron | 25.0% |
| ! | GCTGCCAATTAAATTAAATT+AGG | - | Chr4:149196-149215 | None:intergenic | 25.0% |
| ! | TAAATTTGGATAAACTAGAC+TGG | - | Chr4:150234-150253 | None:intergenic | 25.0% |
| ! | TAATATTGCATAGAAACGAA+TGG | - | Chr4:148947-148966 | None:intergenic | 25.0% |
| ! | TAATTAAGCAAAAGAAGCAA+TGG | - | Chr4:148678-148697 | None:intergenic | 25.0% |
| ! | TATATATGTATGCGAATTCT+CGG | + | Chr4:148808-148827 | MsG0480018092.01.T01:CDS | 25.0% |
| ! | TCTTTAATTGTTACAATGTG+TGG | + | Chr4:149390-149409 | MsG0480018092.01.T01:intron | 25.0% |
| ! | TGTTAATAAAGGTTAAACTC+TGG | + | Chr4:150691-150710 | MsG0480018092.01.T01:intron | 25.0% |
| ! | TTTGATACAAGATCTGATAT+GGG | + | Chr4:149502-149521 | MsG0480018092.01.T01:intron | 25.0% |
| !! | AACTAATACTCTTATTTCAC+AGG | + | Chr4:150489-150508 | MsG0480018092.01.T01:intron | 25.0% |
| !! | ACTATTGTTATTGTAACTGA+TGG | + | Chr4:150006-150025 | MsG0480018092.01.T01:intron | 25.0% |
| !! | TGATATATTTTATGTCTCAC+AGG | + | Chr4:149457-149476 | MsG0480018092.01.T01:intron | 25.0% |
| !!! | TTCATTTTGAAGAATGAAGA+TGG | + | Chr4:148730-148749 | MsG0480018092.01.T01:intron | 25.0% |
| ACCAGAAAGGTTATATGATT+CGG | + | Chr4:150775-150794 | MsG0480018092.01.T01:CDS | 30.0% | |
| ATAACACACACATTGTTCAA+AGG | - | Chr4:150453-150472 | None:intergenic | 30.0% | |
| ATACTCTTAAAATCTCCAGA+AGG | - | Chr4:150526-150545 | None:intergenic | 30.0% | |
| ATATGCTTCATTGTAACTTC+AGG | - | Chr4:149598-149617 | None:intergenic | 30.0% | |
| ATGCATAGAAGAAATGAAGA+AGG | - | Chr4:149075-149094 | None:intergenic | 30.0% | |
| CAAATACACCAAGTATCTAT+AGG | - | Chr4:149014-149033 | None:intergenic | 30.0% | |
| CATATCAGATCTTGTATCAA+AGG | - | Chr4:149503-149522 | None:intergenic | 30.0% | |
| CTTTGATACAAGATCTGATA+TGG | + | Chr4:149501-149520 | MsG0480018092.01.T01:intron | 30.0% | |
| GAATAGCTATACTTAACCAT+TGG | + | Chr4:149633-149652 | MsG0480018092.01.T01:intron | 30.0% | |
| GATTATTTAGCAGTATGCAT+CGG | + | Chr4:149695-149714 | MsG0480018092.01.T01:intron | 30.0% | |
| TACTCTTAAAATCTCCAGAA+GGG | - | Chr4:150525-150544 | None:intergenic | 30.0% | |
| TATGATTGCCTATAGATACT+TGG | + | Chr4:149003-149022 | MsG0480018092.01.T01:intron | 30.0% | |
| TATGCTTCATTGTAACTTCA+GGG | - | Chr4:149597-149616 | None:intergenic | 30.0% | |
| TGATTTCATCAAGAAATCTC+AGG | + | Chr4:150164-150183 | MsG0480018092.01.T01:CDS | 30.0% | |
| TGTCACATATATACCTTCAT+GGG | + | Chr4:148899-148918 | MsG0480018092.01.T01:CDS | 30.0% | |
| TTTAATTGGCAGCTAAAATG+TGG | + | Chr4:149203-149222 | MsG0480018092.01.T01:intron | 30.0% | |
| ! | AATTTTCATAAGGCTGAGTA+TGG | - | Chr4:149325-149344 | None:intergenic | 30.0% |
| ! | ATGCATCGTCATATTTCTAA+AGG | + | Chr4:150544-150563 | MsG0480018092.01.T01:CDS | 30.0% |
| ! | GATTTCATCATTTAGGTTAG+CGG | - | Chr4:150121-150140 | None:intergenic | 30.0% |
| ! | TTTGATGACAAACATATGAC+AGG | + | Chr4:150197-150216 | MsG0480018092.01.T01:intron | 30.0% |
| !! | AGATACTTGGTGTATTTGAT+TGG | + | Chr4:149016-149035 | MsG0480018092.01.T01:intron | 30.0% |
| !! | ATTTTGAAGAATGAAGATGG+AGG | + | Chr4:148733-148752 | MsG0480018092.01.T01:intron | 30.0% |
| !! | TATTATGTATGCTTGCTGTT+GGG | + | Chr4:149780-149799 | MsG0480018092.01.T01:CDS | 30.0% |
| AATGGTAGATAGCACATACT+TGG | - | Chr4:148660-148679 | None:intergenic | 35.0% | |
| ACCGAATCATATAACCTTTC+TGG | - | Chr4:150779-150798 | None:intergenic | 35.0% | |
| ACGTTCAATCTCAAATTTCG+CGG | - | Chr4:148702-148721 | None:intergenic | 35.0% | |
| AGATCTTGTATCAAAGGATG+GGG | - | Chr4:149497-149516 | None:intergenic | 35.0% | |
| ATGCCTATGTCTTACTTGTA+CGG | + | Chr4:149246-149265 | MsG0480018092.01.T01:intron | 35.0% | |
| ATTGGCTACTTAGTGTTCAT+CGG | + | Chr4:150426-150445 | MsG0480018092.01.T01:intron | 35.0% | |
| CAGATCTTGTATCAAAGGAT+GGG | - | Chr4:149498-149517 | None:intergenic | 35.0% | |
| CAGGTTCGATTTCATCATTT+AGG | - | Chr4:150128-150147 | None:intergenic | 35.0% | |
| CTTGATGAAATCATGTCCTT+TGG | - | Chr4:150157-150176 | None:intergenic | 35.0% | |
| GACATCCACAAAAGTAATCT+GGG | - | Chr4:149852-149871 | None:intergenic | 35.0% | |
| GTGTCACATATATACCTTCA+TGG | + | Chr4:148898-148917 | MsG0480018092.01.T01:CDS | 35.0% | |
| TCAGATCTTGTATCAAAGGA+TGG | - | Chr4:149499-149518 | None:intergenic | 35.0% | |
| TGACATCCACAAAAGTAATC+TGG | - | Chr4:149853-149872 | None:intergenic | 35.0% | |
| TTCTTGTAAGCATCTCCATT+TGG | - | Chr4:149814-149833 | None:intergenic | 35.0% | |
| TTGCATAGAAACGAATGGTT+AGG | - | Chr4:148942-148961 | None:intergenic | 35.0% | |
| ! | AAAACTCTGCTTGTATTGAC+AGG | - | Chr4:150053-150072 | None:intergenic | 35.0% |
| ! | CTTGGTGTATTTGATTGGTT+GGG | + | Chr4:149021-149040 | MsG0480018092.01.T01:intron | 35.0% |
| ! | GTCATATTTCTAAAGGCTCA+TGG | + | Chr4:150551-150570 | MsG0480018092.01.T01:CDS | 35.0% |
| ! | GTTTTCTGTGTCTACATTAC+CGG | + | Chr4:148571-148590 | MsG0480018092.01.T01:CDS | 35.0% |
| ! | TCAGCCTTATGAAAATTCAC+TGG | + | Chr4:149328-149347 | MsG0480018092.01.T01:intron | 35.0% |
| ! | TCGTCCAGTGAATTTTCATA+AGG | - | Chr4:149335-149354 | None:intergenic | 35.0% |
| ! | TGTCAATACAAGCAGAGTTT+TGG | + | Chr4:150052-150071 | MsG0480018092.01.T01:intron | 35.0% |
| ! | TTCATGGGAAAAACTTGCTT+CGG | + | Chr4:148914-148933 | MsG0480018092.01.T01:CDS | 35.0% |
| !! | AAATGTGGTGTTATTGTCGA+TGG | + | Chr4:149218-149237 | MsG0480018092.01.T01:intron | 35.0% |
| !! | ACTTGGTGTATTTGATTGGT+TGG | + | Chr4:149020-149039 | MsG0480018092.01.T01:intron | 35.0% |
| !! | GTATTATGTATGCTTGCTGT+TGG | + | Chr4:149779-149798 | MsG0480018092.01.T01:CDS | 35.0% |
| !! | TTACAAGAAGCATCTTGCAA+GGG | + | Chr4:149825-149844 | MsG0480018092.01.T01:CDS | 35.0% |
| AAGAAGGATCCAAAACTCAG+GGG | - | Chr4:149059-149078 | None:intergenic | 40.0% | |
| AAGAATGAAGATGGAGGATG+GGG | + | Chr4:148739-148758 | MsG0480018092.01.T01:intron | 40.0% | |
| AATGAAGCATATCCACTACG+AGG | + | Chr4:149606-149625 | MsG0480018092.01.T01:intron | 40.0% | |
| ATACTTAACCATTGGGTGTG+TGG | + | Chr4:149641-149660 | MsG0480018092.01.T01:intron | 40.0% | |
| CGTTCAATCTCAAATTTCGC+GGG | - | Chr4:148701-148720 | None:intergenic | 40.0% | |
| CTATACCTTCAAACCTTCAG+CGG | - | Chr4:150620-150639 | None:intergenic | 40.0% | |
| GAAGAAGGATCCAAAACTCA+GGG | - | Chr4:149060-149079 | None:intergenic | 40.0% | |
| GAAGAATGAAGATGGAGGAT+GGG | + | Chr4:148738-148757 | MsG0480018092.01.T01:intron | 40.0% | |
| GAATACGGAATCAAGATGTC+CGG | - | Chr4:148593-148612 | None:intergenic | 40.0% | |
| GTTAAGTGCAGTGCAAAACA+TGG | - | Chr4:148788-148807 | None:intergenic | 40.0% | |
| TCTCTCAACTGTAAGATGAG+TGG | - | Chr4:149296-149315 | None:intergenic | 40.0% | |
| TGAAGAAGGATCCAAAACTC+AGG | - | Chr4:149061-149080 | None:intergenic | 40.0% | |
| TGAAGAATGAAGATGGAGGA+TGG | + | Chr4:148737-148756 | MsG0480018092.01.T01:intron | 40.0% | |
| TGCCTATGTCTTACTTGTAC+GGG | + | Chr4:149247-149266 | MsG0480018092.01.T01:intron | 40.0% | |
| TGTAAGATGAGTGGTGTGAT+CGG | - | Chr4:149287-149306 | None:intergenic | 40.0% | |
| TTCCCGTACAAGTAAGACAT+AGG | - | Chr4:149252-149271 | None:intergenic | 40.0% | |
| TTGGCTACTTAGTGTTCATC+GGG | + | Chr4:150427-150446 | MsG0480018092.01.T01:intron | 40.0% | |
| ! | ATCTCTTTGCGATGCTCTTT+TGG | - | Chr4:148616-148635 | None:intergenic | 40.0% |
| ! | CTTTTGTGGATGTCAGAAGA+TGG | + | Chr4:149858-149877 | MsG0480018092.01.T01:CDS | 40.0% |
| ! | GAAGCAAGTTTTTCCCATGA+AGG | - | Chr4:148915-148934 | None:intergenic | 40.0% |
| ! | TCTCTTTGCGATGCTCTTTT+GGG | - | Chr4:148615-148634 | None:intergenic | 40.0% |
| !! | AGAGTTTTGGTAGCCAAGAA+GGG | + | Chr4:150065-150084 | MsG0480018092.01.T01:intron | 40.0% |
| !! | CTTACAAGAAGCATCTTGCA+AGG | + | Chr4:149824-149843 | MsG0480018092.01.T01:CDS | 40.0% |
| !! | TTTCTGACCAGCTTGTTGAA+AGG | - | Chr4:149569-149588 | None:intergenic | 40.0% |
| AACCATTGGGTGTGTGGAAA+AGG | + | Chr4:149647-149666 | MsG0480018092.01.T01:intron | 45.0% | |
| AATCGGAAACTTGCCATCCA+TGG | - | Chr4:150594-150613 | None:intergenic | 45.0% | |
| AATGTTGCCTCCAGAGATTG+TGG | + | Chr4:150739-150758 | MsG0480018092.01.T01:CDS | 45.0% | |
| AGAAGATGGAATGACCATGC+AGG | + | Chr4:149872-149891 | MsG0480018092.01.T01:CDS | 45.0% | |
| AGAGATTGTGGGGGAAAAGA+TGG | + | Chr4:150751-150770 | MsG0480018092.01.T01:CDS | 45.0% | |
| AGCTATTCTCATCCTCGTAG+TGG | - | Chr4:149621-149640 | None:intergenic | 45.0% | |
| ATCACGTCACCTATGTGCAA+AGG | + | Chr4:149355-149374 | MsG0480018092.01.T01:intron | 45.0% | |
| ATGTGCTCGAATCCAGTTTC+TGG | - | Chr4:148875-148894 | None:intergenic | 45.0% | |
| ATGTTGCCTCCAGAGATTGT+GGG | + | Chr4:150740-150759 | MsG0480018092.01.T01:CDS | 45.0% | |
| CTTGTACGGGAAGAGATTTG+TGG | + | Chr4:149260-149279 | MsG0480018092.01.T01:intron | 45.0% | |
| GGGAAAAGATGGAACCAGAA+AGG | + | Chr4:150762-150781 | MsG0480018092.01.T01:CDS | 45.0% | |
| TGACTCTCACCTTTGCACAT+AGG | - | Chr4:149367-149386 | None:intergenic | 45.0% | |
| TGTATGCGAATTCTCGGAGA+AGG | + | Chr4:148814-148833 | MsG0480018092.01.T01:CDS | 45.0% | |
| TGTTGGGTGGAAGATCCAAA+TGG | + | Chr4:149796-149815 | MsG0480018092.01.T01:CDS | 45.0% | |
| ! | ATCTTTTCCCCCACAATCTC+TGG | - | Chr4:150752-150771 | None:intergenic | 45.0% |
| ! | CAATGTCTTGTTGTCGCTTC+AGG | + | Chr4:150799-150818 | MsG0480018092.01.T01:CDS | 45.0% |
| ! | CGCTGAAGGTTTGAAGGTAT+AGG | + | Chr4:150618-150637 | MsG0480018092.01.T01:intron | 45.0% |
| ! | TACCTTTTCCACACACCCAA+TGG | - | Chr4:149652-149671 | None:intergenic | 45.0% |
| ! | TTGCCATCCATGGTCTTGAT+CGG | - | Chr4:150584-150603 | None:intergenic | 45.0% |
| !! | AGGGTCCCAGATTACTTTTG+TGG | + | Chr4:149844-149863 | MsG0480018092.01.T01:CDS | 45.0% |
| !! | CAGAGTTTTGGTAGCCAAGA+AGG | + | Chr4:150064-150083 | MsG0480018092.01.T01:intron | 45.0% |
| !! | GCGATGCTCTTTTGGGAATA+CGG | - | Chr4:148608-148627 | None:intergenic | 45.0% |
| !! | TATGTATGCTTGCTGTTGGG+TGG | + | Chr4:149783-149802 | MsG0480018092.01.T01:CDS | 45.0% |
| !! | AAAATTATATTATTCTAATT+AGG | + | Chr4:150392-150411 | MsG0480018092.01.T01:intron | 5.0% |
| !!! | ATTAACTAATTTTTTAAATT+TGG | - | Chr4:150248-150267 | None:intergenic | 5.0% |
| ACCTTCTCCGATCAAGACCA+TGG | + | Chr4:150574-150593 | MsG0480018092.01.T01:CDS | 50.0% | |
| AGCGGCAAGCAAAGCTTGAA+CGG | - | Chr4:150103-150122 | None:intergenic | 50.0% | |
| AGGATGGGGACTACACATTG+AGG | + | Chr4:148753-148772 | MsG0480018092.01.T01:CDS | 50.0% | |
| ATCGAACCTGCACTTGCCAA+AGG | + | Chr4:150138-150157 | MsG0480018092.01.T01:CDS | 50.0% | |
| ATTCTCGGAGAAGGACCTGA+TGG | + | Chr4:148823-148842 | MsG0480018092.01.T01:CDS | 50.0% | |
| CAAACCTTCAGCGGTGCAAT+CGG | - | Chr4:150611-150630 | None:intergenic | 50.0% | |
| CAGGTTACAGAGAACCCTTC+TGG | + | Chr4:150508-150527 | MsG0480018092.01.T01:intron | 50.0% | |
| CTTGTGCTAGAGCCAGAAAC+TGG | + | Chr4:148860-148879 | MsG0480018092.01.T01:CDS | 50.0% | |
| GCAAAACCAGCATCCCTTCT+TGG | - | Chr4:150081-150100 | None:intergenic | 50.0% | |
| GGATGGGGACTACACATTGA+GGG | + | Chr4:148754-148773 | MsG0480018092.01.T01:CDS | 50.0% | |
| TCATGTCCTTTGGCAAGTGC+AGG | - | Chr4:150147-150166 | None:intergenic | 50.0% | |
| TCTCCGATCAAGACCATGGA+TGG | + | Chr4:150578-150597 | MsG0480018092.01.T01:CDS | 50.0% | |
| TGTTGCCTCCAGAGATTGTG+GGG | + | Chr4:150741-150760 | MsG0480018092.01.T01:CDS | 50.0% | |
| TTGCACCGCTGAAGGTTTGA+AGG | + | Chr4:150612-150631 | MsG0480018092.01.T01:CDS | 50.0% | |
| ! | GATCCAAAACTCAGGGGCAT+GGG | - | Chr4:149053-149072 | None:intergenic | 50.0% |
| ! | TCCATGGTCTTGATCGGAGA+AGG | - | Chr4:150578-150597 | None:intergenic | 50.0% |
| ! | TTTTCCCCCACAATCTCTGG+AGG | - | Chr4:150749-150768 | None:intergenic | 50.0% |
| GCATTGTCTTGACCGCCATC+AGG | - | Chr4:148841-148860 | None:intergenic | 55.0% | |
| GGATCCAAAACTCAGGGGCA+TGG | - | Chr4:149054-149073 | None:intergenic | 55.0% | |
| GTTGCCTCCAGAGATTGTGG+GGG | + | Chr4:150742-150761 | MsG0480018092.01.T01:CDS | 55.0% | |
| GTTTCCGATTGCACCGCTGA+AGG | + | Chr4:150604-150623 | MsG0480018092.01.T01:CDS | 55.0% | |
| TGGTAGCCAAGAAGGGATGC+TGG | + | Chr4:150072-150091 | MsG0480018092.01.T01:intron | 55.0% | |
| ! | CAACCCATGCCCCTGAGTTT+TGG | + | Chr4:149047-149066 | MsG0480018092.01.T01:intron | 55.0% |
| !! | CAGCTTGTTGAAAGGCCAGC+GGG | - | Chr4:149561-149580 | None:intergenic | 55.0% |
| !! | CCAGCTTGTTGAAAGGCCAG+CGG | - | Chr4:149562-149581 | None:intergenic | 55.0% |
| !! | GCAGTATGCATCGGCTGAAG+TGG | + | Chr4:149704-149723 | MsG0480018092.01.T01:intron | 55.0% |
| AAAGGCCAGCGGGTGAGAAG+TGG | - | Chr4:149551-149570 | None:intergenic | 60.0% | |
| CTCGGAGAAGGACCTGATGG+CGG | + | Chr4:148826-148845 | MsG0480018092.01.T01:CDS | 60.0% | |
| !! | CCGCTGGCCTTTCAACAAGC+TGG | + | Chr4:149559-149578 | MsG0480018092.01.T01:intron | 60.0% |
| CCAGCGGGTGAGAAGTGGCT+CGG | - | Chr4:149546-149565 | None:intergenic | 65.0% | |
| CCGAGCCACTTCTCACCCGC+TGG | + | Chr4:149543-149562 | MsG0480018092.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 148565 | 150856 | 148565 | ID=MsG0480018092.01;Name=MsG0480018092.01 |
| Chr4 | mRNA | 148565 | 150856 | 148565 | ID=MsG0480018092.01.T01;Parent=MsG0480018092.01;Name=MsG0480018092.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.6|0.5|1|0.8|0.83|6|0|256 |
| Chr4 | exon | 148565 | 148660 | 148565 | ID=MsG0480018092.01.T01:exon:422;Parent=MsG0480018092.01.T01 |
| Chr4 | exon | 148742 | 148935 | 148742 | ID=MsG0480018092.01.T01:exon:423;Parent=MsG0480018092.01.T01 |
| Chr4 | exon | 149779 | 149893 | 149779 | ID=MsG0480018092.01.T01:exon:424;Parent=MsG0480018092.01.T01 |
| Chr4 | exon | 150078 | 150185 | 150078 | ID=MsG0480018092.01.T01:exon:425;Parent=MsG0480018092.01.T01 |
| Chr4 | exon | 150511 | 150633 | 150511 | ID=MsG0480018092.01.T01:exon:426;Parent=MsG0480018092.01.T01 |
| Chr4 | exon | 150722 | 150856 | 150722 | ID=MsG0480018092.01.T01:exon:427;Parent=MsG0480018092.01.T01 |
| Chr4 | CDS | 148565 | 148660 | 148565 | ID=MsG0480018092.01.T01:cds;Parent=MsG0480018092.01.T01 |
| Chr4 | CDS | 148742 | 148935 | 148742 | ID=MsG0480018092.01.T01:cds;Parent=MsG0480018092.01.T01 |
| Chr4 | CDS | 149779 | 149893 | 149779 | ID=MsG0480018092.01.T01:cds;Parent=MsG0480018092.01.T01 |
| Chr4 | CDS | 150078 | 150185 | 150078 | ID=MsG0480018092.01.T01:cds;Parent=MsG0480018092.01.T01 |
| Chr4 | CDS | 150511 | 150633 | 150511 | ID=MsG0480018092.01.T01:cds;Parent=MsG0480018092.01.T01 |
| Chr4 | CDS | 150722 | 150856 | 150722 | ID=MsG0480018092.01.T01:cds;Parent=MsG0480018092.01.T01 |
| Gene Sequence |
| Protein sequence |
