AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011633.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011633.01.T01 MTR_3g007490 94.215 363 20 1 1 362 1 363 0.0 680
MsG0380011633.01.T01 MTR_1g030450 54.469 358 146 4 14 359 6 358 5.07e-139 399
MsG0380011633.01.T01 MTR_7g076680 56.491 285 123 1 74 357 79 363 1.61e-119 350
MsG0380011633.01.T01 MTR_7g076680 56.491 285 123 1 74 357 62 346 1.94e-119 349
MsG0380011633.01.T01 MTR_7g076680 56.491 285 123 1 74 357 58 342 3.48e-119 348
MsG0380011633.01.T01 MTR_7g108580 51.557 289 139 1 72 359 2 290 1.54e-107 317
MsG0380011633.01.T01 MTR_3g007580 76.577 111 19 3 197 306 13 117 5.88e-49 161
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011633.01.T01 AT2G38660 52.874 348 153 5 15 359 12 351 6.82e-131 379
MsG0380011633.01.T01 AT2G38660 52.874 348 153 5 15 359 12 351 6.82e-131 379
MsG0380011633.01.T01 AT4G00620 58.966 290 118 1 69 357 66 355 8.87e-125 363
MsG0380011633.01.T01 AT3G12290 52.349 298 141 1 64 360 1 298 8.68e-112 328
MsG0380011633.01.T01 AT2G38660 50.476 315 145 5 15 326 12 318 1.53e-110 326
MsG0380011633.01.T01 AT4G00600 45.988 324 132 3 41 357 18 305 1.47e-94 285
MsG0380011633.01.T01 AT2G38660 47.699 239 115 4 15 251 12 242 7.42e-75 232
MsG0380011633.01.T01 AT2G38660 41.875 160 83 4 15 172 12 163 2.55e-35 128
MsG0380011633.01.T01 AT2G38660 41.875 160 83 4 15 172 12 163 2.55e-35 128
MsG0380011633.01.T01 AT2G38660 41.875 160 83 4 15 172 12 163 2.55e-35 128
MsG0380011633.01.T01 AT2G38660 41.875 160 83 4 15 172 12 163 2.55e-35 128

Find 82 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCCAATCTTCCTGATATT+TGG 0.125196 3:+2738484 MsG0380011633.01.T01:CDS
GCAAGGTTTCCTATATTTAA+AGG 0.181472 3:-2740807 None:intergenic
TCCTAGATTGGCTGTGGTTT+TGG 0.246583 3:+2739489 MsG0380011633.01.T01:CDS
TCCCAATCTTCCTGATATTT+GGG 0.270123 3:+2738485 MsG0380011633.01.T01:CDS
GAACATTGTAAGTCCTAAAA+AGG 0.292918 3:+2740767 MsG0380011633.01.T01:CDS
GGATTTCATCCTTTAAATAT+AGG 0.295142 3:+2740798 MsG0380011633.01.T01:CDS
ACCAACTTCATTGCTATTGC+AGG 0.312556 3:+2740959 MsG0380011633.01.T01:CDS
GCTTCAGACGTTATTTGTTC+AGG 0.335800 3:-2741101 None:intergenic
CATTGGAAAGTTTCCTAGAT+TGG 0.350340 3:+2739477 MsG0380011633.01.T01:CDS
TCAGCCATTACTCCGGTTCC+TGG 0.367944 3:+2742474 MsG0380011633.01.T01:CDS
CACAAGCTTTCGACTTAAGA+TGG 0.381993 3:-2739543 None:intergenic
TAGCAATTGGTTTACCTTCA+AGG 0.383727 3:-2739405 None:intergenic
ATCGGAAGGGGTAAAATTGC+AGG 0.391837 3:+2740933 MsG0380011633.01.T01:CDS
ATCCTGGTCGTCATTAAAAC+TGG 0.395866 3:-2739641 None:intergenic
TACCCAAATATCAGGAAGAT+TGG 0.400372 3:-2738487 None:intergenic
ATTGGAGACTTTGTGGCAAA+AGG 0.401294 3:-2738536 None:intergenic
CGAACATAGTTCGTGGTGAT+TGG 0.402205 3:+2741153 MsG0380011633.01.T01:CDS
TGTCTAGGTACCCAAATATC+AGG 0.402362 3:-2738495 None:intergenic
AACTTACATTGGAGACTTTG+TGG 0.407928 3:-2738543 None:intergenic
CAATCACCACGAACTATGTT+CGG 0.411038 3:-2741152 None:intergenic
CACAGTGCTGCAATCCTTGA+AGG 0.420397 3:+2739391 MsG0380011633.01.T01:CDS
CTTTGTGGCAAAAGGGTATG+AGG 0.431694 3:-2738528 None:intergenic
ATTGAGTTGTTACTTAATCA+TGG 0.438155 3:+2740879 MsG0380011633.01.T01:CDS
CTCCGGTGACACGGAAGACT+TGG 0.440017 3:-2742419 None:intergenic
GGTCCTACGCCTCCAGGAAC+CGG 0.449954 3:-2742486 None:intergenic
CATGGGAACAAATCAAGTTA+AGG 0.451663 3:+2741202 MsG0380011633.01.T01:CDS
TTGGAGACTTTGTGGCAAAA+GGG 0.455726 3:-2738535 None:intergenic
AGAAGCATCGATACTGTAAC+TGG 0.462829 3:-2742507 None:intergenic
CTCTTCAAAGCAAACATCTC+CGG 0.464188 3:-2742436 None:intergenic
GATTCCGCAAAACGTGCATT+CGG 0.475354 3:+2742543 MsG0380011633.01.T01:CDS
ACCCAAATATCAGGAAGATT+GGG 0.478451 3:-2738486 None:intergenic
ACCAAAACCACAGCCAATCT+AGG 0.478876 3:-2739490 None:intergenic
GAATAAATTACTTGAGGTAG+AGG 0.484733 3:-2739688 None:intergenic
AACGTCTGAAGCGGATATCA+TGG 0.489724 3:+2741112 MsG0380011633.01.T01:CDS
TCTTTATCCCTTGTGCCTCA+AGG 0.493483 3:+2740850 MsG0380011633.01.T01:CDS
AAAGTTTCCTAGATTGGCTG+TGG 0.496410 3:+2739483 MsG0380011633.01.T01:CDS
ACACGGAAGACTTGGCTGCT+AGG 0.499836 3:-2742411 None:intergenic
AGAAGGATGAAGAGTGACAT+TGG 0.502251 3:+2739460 MsG0380011633.01.T01:CDS
GATATCATGGTCACAGATGT+TGG 0.506308 3:+2741125 MsG0380011633.01.T01:CDS
AGCCAAGTCTTCCGTGTCAC+CGG 0.512333 3:+2742417 MsG0380011633.01.T01:CDS
CACGGAAGACTTGGCTGCTA+GGG 0.516028 3:-2742410 None:intergenic
CGGAGATGTTTGCTTTGAAG+AGG 0.522930 3:+2742437 MsG0380011633.01.T01:CDS
CAATAATTCCATGCACATCC+TGG 0.524039 3:-2739657 None:intergenic
CTCTTTCTGGGATAGTAGCA+TGG 0.527165 3:+2738394 MsG0380011633.01.T01:CDS
ATGCAGCTCCTTGAGGCACA+AGG 0.531707 3:-2740858 None:intergenic
TAATCACATAAAATTGAAAG+TGG 0.533762 3:+2739426 MsG0380011633.01.T01:CDS
GTAACTGGTCCTACGCCTCC+AGG 0.535799 3:-2742492 None:intergenic
CGTGGTGATTGGATAAAGAA+AGG 0.537055 3:+2741164 MsG0380011633.01.T01:CDS
ACCTGCAATAGCAATGAAGT+TGG 0.541757 3:-2740960 None:intergenic
TGAGGGGAAGTGCTGTGTCT+AGG 0.545132 3:-2738510 None:intergenic
ATAGGAAACCTTGCAAGAAG+TGG 0.551233 3:+2740816 MsG0380011633.01.T01:CDS
CTTTGAAGAGGCAGTCAAAG+TGG 0.553372 3:+2742449 MsG0380011633.01.T01:CDS
GCCTCCAGGAACCGGAGTAA+TGG 0.557546 3:-2742478 None:intergenic
AGGAGCTGTGGTCATTGACA+TGG 0.569026 3:+2741184 MsG0380011633.01.T01:CDS
TGAGGCACAAGGGATAAAGA+AGG 0.570210 3:-2740847 None:intergenic
ACTCCGGTTCCTGGAGGCGT+AGG 0.570712 3:+2742483 MsG0380011633.01.T01:CDS
AGCAAACATCTCCGGTGACA+CGG 0.577293 3:-2742428 None:intergenic
TGAACAAATAACGTCTGAAG+CGG 0.584859 3:+2741103 MsG0380011633.01.T01:CDS
TTTGTGGCAAAAGGGTATGA+GGG 0.585010 3:-2738527 None:intergenic
AAAGTTGCAATAATCGGAAG+GGG 0.585718 3:+2740921 MsG0380011633.01.T01:CDS
AAAAGTTGCAATAATCGGAA+GGG 0.588762 3:+2740920 MsG0380011633.01.T01:CDS
AATGACGACCAGGATGTGCA+TGG 0.590577 3:+2739649 MsG0380011633.01.T01:CDS
AAAAGTTGGCATTAAAACTG+TGG 0.594485 3:+2739567 MsG0380011633.01.T01:CDS
AATAAATTACTTGAGGTAGA+GGG 0.597462 3:-2739687 None:intergenic
AAGTGGCTGATGAGATAAGA+AGG 0.600179 3:+2739443 MsG0380011633.01.T01:CDS
AATCATGGTATTGAAATCAG+AGG 0.602973 3:+2740894 MsG0380011633.01.T01:CDS
ATCATGGTATTGAAATCAGA+GGG 0.605397 3:+2740895 MsG0380011633.01.T01:CDS
GAGGCACAAGGGATAAAGAA+GGG 0.608337 3:-2740846 None:intergenic
GGAATCCCGAACATAGTTCG+TGG 0.608647 3:+2741146 MsG0380011633.01.T01:CDS
TGCAGCTCCTTGAGGCACAA+GGG 0.610682 3:-2740857 None:intergenic
AATCACCACGAACTATGTTC+GGG 0.619416 3:-2741151 None:intergenic
CAACTCAATGCAGCTCCTTG+AGG 0.623513 3:-2740865 None:intergenic
TGAGTAGAGGCACCACGCCA+CGG 0.625255 3:+2741049 MsG0380011633.01.T01:intron
AGTGGCATCAGCCATTACTC+CGG 0.638819 3:+2742467 MsG0380011633.01.T01:CDS
GCCATTACTCCGGTTCCTGG+AGG 0.641954 3:+2742477 MsG0380011633.01.T01:CDS
TTGTGGCAAAAGGGTATGAG+GGG 0.643067 3:-2738526 None:intergenic
GGAGCTGTGGTCATTGACAT+GGG 0.657602 3:+2741185 MsG0380011633.01.T01:CDS
TTTCTTGCAGCATCTTGACG+AGG 0.660809 3:+2740734 MsG0380011633.01.T01:intron
GTAACAAGCTGACCGTGGCG+TGG 0.669804 3:-2741061 None:intergenic
TTGGATAAAGAAAGGAGCTG+TGG 0.676878 3:+2741172 MsG0380011633.01.T01:CDS
CGCATGTAACAAGCTGACCG+TGG 0.679219 3:-2741066 None:intergenic
CTTCAAGGATTGCAGCACTG+TGG 0.695168 3:-2739390 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATTCAAAGTTAATA+AGG + Chr3:2741348-2741367 MsG0380011633.01.T01:intron 10.0%
!! TTTAATATATAATAATTTCC+AGG + Chr3:2742386-2742405 MsG0380011633.01.T01:intron 10.0%
!!! AAATTTACTTCAATATTTTA+AGG + Chr3:2741238-2741257 MsG0380011633.01.T01:intron 10.0%
!!! TATTTTATTATTTGAAAACT+TGG + Chr3:2741301-2741320 MsG0380011633.01.T01:intron 10.0%
!! ACATTAAATATAACTTACAT+TGG - Chr3:2738557-2738576 None:intergenic 15.0%
!! TAAACTAAAACAAATTGAAT+TGG - Chr3:2742264-2742283 None:intergenic 15.0%
!!! AAAAATTAATTTTGTGTGTT+TGG - Chr3:2739981-2740000 None:intergenic 15.0%
!!! ACACACAAAATTAATTTTTA+AGG + Chr3:2739982-2740001 MsG0380011633.01.T01:intron 15.0%
!!! ATTCAATTTGAAACAATTTT+CGG - Chr3:2741511-2741530 None:intergenic 15.0%
!!! ATTTTGGAATATTAATAATG+TGG + Chr3:2738973-2738992 MsG0380011633.01.T01:intron 15.0%
!!! TCATTTTTTAAGTTAAGTAT+TGG + Chr3:2738670-2738689 MsG0380011633.01.T01:intron 15.0%
!!! TGAATTTCTATGTTTTATAT+CGG + Chr3:2741526-2741545 MsG0380011633.01.T01:intron 15.0%
!!! TGAATTTTTTTCCAAATAAT+TGG + Chr3:2739207-2739226 MsG0380011633.01.T01:intron 15.0%
!!! TTTTGGAATATTAATAATGT+GGG + Chr3:2738974-2738993 MsG0380011633.01.T01:intron 15.0%
!! AAAATCTAACCAATAATTGT+AGG - Chr3:2739837-2739856 None:intergenic 20.0%
!! AAAATGATAGTCTCTATAAA+AGG + Chr3:2739250-2739269 MsG0380011633.01.T01:intron 20.0%
!! AAATCTAACCAATAATTGTA+GGG - Chr3:2739836-2739855 None:intergenic 20.0%
!! AAATGGAATAAAATTTGTGT+AGG + Chr3:2739286-2739305 MsG0380011633.01.T01:intron 20.0%
!! AAGAATGAATAAATTACTTG+AGG - Chr3:2739697-2739716 None:intergenic 20.0%
!! AAGGTAAATCTGTATTAAAA+TGG + Chr3:2739269-2739288 MsG0380011633.01.T01:intron 20.0%
!! ATTAAATCAAGTGTATCTAT+AGG + Chr3:2740507-2740526 MsG0380011633.01.T01:intron 20.0%
!! TAATCACATAAAATTGAAAG+TGG + Chr3:2739426-2739445 MsG0380011633.01.T01:CDS 20.0%
!! TACCAACTTAAATATTAAGT+TGG - Chr3:2741658-2741677 None:intergenic 20.0%
!! TTCCAACTTAATATTTAAGT+TGG + Chr3:2741653-2741672 MsG0380011633.01.T01:intron 20.0%
!! TTGGAATATCAATAATGTAA+TGG - Chr3:2738711-2738730 None:intergenic 20.0%
!!! AATTTTATGTGATTAGCAAT+TGG - Chr3:2739421-2739440 None:intergenic 20.0%
!!! AGATTTTAGATCAATTGAAA+AGG - Chr3:2740626-2740645 None:intergenic 20.0%
!!! GAATTTCTATGTTTTATATC+GGG + Chr3:2741527-2741546 MsG0380011633.01.T01:intron 20.0%
!!! TTTGGAATATTAATAATGTG+GGG + Chr3:2738975-2738994 MsG0380011633.01.T01:intron 20.0%
! AAAAATCAAATGCCTAAAGT+TGG - Chr3:2739002-2739021 None:intergenic 25.0%
! AAAACATTTAGCATCAGTAT+CGG - Chr3:2741439-2741458 None:intergenic 25.0%
! AAATGCATCTAGATAAGAAT+AGG - Chr3:2742368-2742387 None:intergenic 25.0%
! AACAAGTAGAACTTTGTATT+GGG - Chr3:2741881-2741900 None:intergenic 25.0%
! AACATGATAAGTGATTTCAA+AGG - Chr3:2741464-2741483 None:intergenic 25.0%
! AATAAATTACTTGAGGTAGA+GGG - Chr3:2739690-2739709 None:intergenic 25.0%
! AATCAAATTCATCTCTTTGT+TGG + Chr3:2738757-2738776 MsG0380011633.01.T01:intron 25.0%
! AATCTAACCAATAATTGTAG+GGG - Chr3:2739835-2739854 None:intergenic 25.0%
! ACATGATAAGTGATTTCAAA+GGG - Chr3:2741463-2741482 None:intergenic 25.0%
! AGAATGTTTCAATTGCTAAA+TGG + Chr3:2741007-2741026 MsG0380011633.01.T01:intron 25.0%
! CATAGATAGTAAATTCAACA+TGG + Chr3:2741399-2741418 MsG0380011633.01.T01:intron 25.0%
! GGATTTCATCCTTTAAATAT+AGG + Chr3:2740798-2740817 MsG0380011633.01.T01:CDS 25.0%
! TAACAACAATCGTAACAATT+AGG - Chr3:2739730-2739749 None:intergenic 25.0%
! TAACAAGTAGAACTTTGTAT+TGG - Chr3:2741882-2741901 None:intergenic 25.0%
! TAACTCAACCTTTACAAAAT+CGG - Chr3:2741632-2741651 None:intergenic 25.0%
! TCAAACGCAAAAATCTTATA+TGG + Chr3:2740288-2740307 MsG0380011633.01.T01:intron 25.0%
! TCATGTAATAGAAATGAGAA+AGG + Chr3:2740471-2740490 MsG0380011633.01.T01:intron 25.0%
! TGAAAAATAATGACTAGCAA+AGG + Chr3:2740327-2740346 MsG0380011633.01.T01:intron 25.0%
! TGTGTAGGATTAAACTTAAA+AGG + Chr3:2739301-2739320 MsG0380011633.01.T01:intron 25.0%
! TGTTTACCATCTTAAAAGTT+GGG + Chr3:2739950-2739969 MsG0380011633.01.T01:intron 25.0%
! TTGTTTACCATCTTAAAAGT+TGG + Chr3:2739949-2739968 MsG0380011633.01.T01:intron 25.0%
!! ACTATCATTTTATTCGTTAC+AGG - Chr3:2739241-2739260 None:intergenic 25.0%
!! AGATTTATCTAAGATCCATT+GGG - Chr3:2740121-2740140 None:intergenic 25.0%
!! ATGATGTTAAGTATCTGTTT+TGG + Chr3:2738591-2738610 MsG0380011633.01.T01:intron 25.0%
!! ATTGAGTTGTTACTTAATCA+TGG + Chr3:2740879-2740898 MsG0380011633.01.T01:CDS 25.0%
!! GATTCAAATTTTGCAATTTC+TGG - Chr3:2738741-2738760 None:intergenic 25.0%
!!! AAGAGTTGAGTTTGTTATAT+AGG - Chr3:2741943-2741962 None:intergenic 25.0%
!!! AATTTGAAACAATTTTCGGA+TGG - Chr3:2741507-2741526 None:intergenic 25.0%
!!! AGAGTTGAGTTTGTTATATA+GGG - Chr3:2741942-2741961 None:intergenic 25.0%
!!! ATTGTTGTTATTTAACGAAG+TGG + Chr3:2739740-2739759 MsG0380011633.01.T01:intron 25.0%
!!! GAAGAAAGATTCTGTTTTTA+AGG - Chr3:2742118-2742137 None:intergenic 25.0%
!!! TATCTGTTTTGGTTAGTTTA+AGG + Chr3:2738602-2738621 MsG0380011633.01.T01:intron 25.0%
!!! TTAGGCATTTGATTTTTCTT+TGG + Chr3:2739005-2739024 MsG0380011633.01.T01:intron 25.0%
!!! TTTGGTTAGTTTAAGGTAAA+GGG + Chr3:2738609-2738628 MsG0380011633.01.T01:intron 25.0%
!!! TTTTGGTTAGTTTAAGGTAA+AGG + Chr3:2738608-2738627 MsG0380011633.01.T01:intron 25.0%
AAAAAGTTGCAATAATCGGA+AGG + Chr3:2740919-2740938 MsG0380011633.01.T01:CDS 30.0%
AAAACAGAATGAGACTAAAC+TGG + Chr3:2742141-2742160 MsG0380011633.01.T01:intron 30.0%
AAAAGTTGCAATAATCGGAA+GGG + Chr3:2740920-2740939 MsG0380011633.01.T01:CDS 30.0%
AAAAGTTGGCATTAAAACTG+TGG + Chr3:2739567-2739586 MsG0380011633.01.T01:CDS 30.0%
AAACTGACATATAAAGTGAG+AGG - Chr3:2741843-2741862 None:intergenic 30.0%
AAATTGAGATCGATAGTGAT+AGG + Chr3:2740219-2740238 MsG0380011633.01.T01:intron 30.0%
AACGCAAAAATCTTATATGG+TGG + Chr3:2740291-2740310 MsG0380011633.01.T01:intron 30.0%
AAGCCAAATGAATGTATGTT+GGG + Chr3:2742056-2742075 MsG0380011633.01.T01:intron 30.0%
AAGTGAGGAAAATTAGACAT+CGG - Chr3:2741993-2742012 None:intergenic 30.0%
AATCCCAACATACATTCATT+TGG - Chr3:2742062-2742081 None:intergenic 30.0%
AATTGAGATCGATAGTGATA+GGG + Chr3:2740220-2740239 MsG0380011633.01.T01:intron 30.0%
ACAGATCTAGATGAATGAAT+GGG + Chr3:2738869-2738888 MsG0380011633.01.T01:intron 30.0%
ACAGCAGTAAATGAATGAAA+AGG + Chr3:2742299-2742318 MsG0380011633.01.T01:intron 30.0%
ACGCAAAAATCTTATATGGT+GGG + Chr3:2740292-2740311 MsG0380011633.01.T01:intron 30.0%
AGGACTAAACACCAATTATT+TGG - Chr3:2739221-2739240 None:intergenic 30.0%
CATGATAAGTGATTTCAAAG+GGG - Chr3:2741462-2741481 None:intergenic 30.0%
GAACATTGTAAGTCCTAAAA+AGG + Chr3:2740767-2740786 MsG0380011633.01.T01:CDS 30.0%
GAATAAATTACTTGAGGTAG+AGG - Chr3:2739691-2739710 None:intergenic 30.0%
GCAAGGTTTCCTATATTTAA+AGG - Chr3:2740810-2740829 None:intergenic 30.0%
GGGAAAAAAGTTGCAATAAT+CGG + Chr3:2740915-2740934 MsG0380011633.01.T01:CDS 30.0%
TAAGCCAAATGAATGTATGT+TGG + Chr3:2742055-2742074 MsG0380011633.01.T01:intron 30.0%
TACAGATCTAGATGAATGAA+TGG + Chr3:2738868-2738887 MsG0380011633.01.T01:intron 30.0%
TAGATAAGAATAGGTCCATA+AGG - Chr3:2742359-2742378 None:intergenic 30.0%
TAGTAATCCGAAATTTGGTT+GGG - Chr3:2739868-2739887 None:intergenic 30.0%
TGAAACCAACTTAAGAAACA+TGG + Chr3:2740398-2740417 MsG0380011633.01.T01:intron 30.0%
! AATCATGGTATTGAAATCAG+AGG + Chr3:2740894-2740913 MsG0380011633.01.T01:CDS 30.0%
! ACATACATTCATTTGGCTTA+AGG - Chr3:2742055-2742074 None:intergenic 30.0%
! ATCATGGTATTGAAATCAGA+GGG + Chr3:2740895-2740914 MsG0380011633.01.T01:CDS 30.0%
! ATGAATGTATGTTGGGATTT+TGG + Chr3:2742063-2742082 MsG0380011633.01.T01:intron 30.0%
! ATGTGTTACTAAATTGTGAC+AGG - Chr3:2742220-2742239 None:intergenic 30.0%
! CAGATTTATCTAAGATCCAT+TGG - Chr3:2740122-2740141 None:intergenic 30.0%
! GCAAATGTTGCTTATAAATG+TGG + Chr3:2738938-2738957 MsG0380011633.01.T01:intron 30.0%
! TCATTTTCAGTGCAATTTTC+TGG - Chr3:2739604-2739623 None:intergenic 30.0%
! TGCATTTTCATTCTCTTTCT+GGG + Chr3:2738382-2738401 MsG0380011633.01.T01:CDS 30.0%
! TTGCATTTTCATTCTCTTTC+TGG + Chr3:2738381-2738400 MsG0380011633.01.T01:CDS 30.0%
!! ATGTAATGGACTCAATTTCA+AGG - Chr3:2738697-2738716 None:intergenic 30.0%
!! CAACAACATCAATCACTTTT+TGG - Chr3:2739932-2739951 None:intergenic 30.0%
!! CAACATTCTTCTACTTTTCT+TGG + Chr3:2738462-2738481 MsG0380011633.01.T01:CDS 30.0%
!! CTTACAAACCGATTTTGTAA+AGG + Chr3:2741621-2741640 MsG0380011633.01.T01:intron 30.0%
!! CTTTACAAAATCGGTTTGTA+AGG - Chr3:2741623-2741642 None:intergenic 30.0%
!! TGCTAATAAGTTGATAACAC+TGG + Chr3:2738801-2738820 MsG0380011633.01.T01:intron 30.0%
!! TTGTTATTTAACGAAGTGGT+TGG + Chr3:2739744-2739763 MsG0380011633.01.T01:intron 30.0%
!!! TGCAATTTCTGGAATCATTT+TGG - Chr3:2738730-2738749 None:intergenic 30.0%
AAAGTTGCAATAATCGGAAG+GGG + Chr3:2740921-2740940 MsG0380011633.01.T01:CDS 35.0%
AACTTACATTGGAGACTTTG+TGG - Chr3:2738546-2738565 None:intergenic 35.0%
AATAAGGCACAAACTCAAAG+AGG + Chr3:2741364-2741383 MsG0380011633.01.T01:intron 35.0%
AATGAAATGCAGCACAAGAT+GGG + Chr3:2740360-2740379 MsG0380011633.01.T01:intron 35.0%
ACCATCTTAAAAGTTGGGTT+GGG + Chr3:2739955-2739974 MsG0380011633.01.T01:intron 35.0%
ACCCAAATATCAGGAAGATT+GGG - Chr3:2738489-2738508 None:intergenic 35.0%
ACTCAAGATGGCTTAGTAAT+GGG + Chr3:2740092-2740111 MsG0380011633.01.T01:intron 35.0%
AGTGAGGAAAATTAGACATC+GGG - Chr3:2741992-2742011 None:intergenic 35.0%
ATCTTAGCCCCTACAATTAT+TGG + Chr3:2739825-2739844 MsG0380011633.01.T01:intron 35.0%
ATTCCACATTGGATGAGATA+TGG + Chr3:2741787-2741806 MsG0380011633.01.T01:intron 35.0%
CAAGTGACTTAAACTAAGTG+AGG - Chr3:2742008-2742027 None:intergenic 35.0%
CATGGGAACAAATCAAGTTA+AGG + Chr3:2741202-2741221 MsG0380011633.01.T01:CDS 35.0%
CATTGGAAAGTTTCCTAGAT+TGG + Chr3:2739477-2739496 MsG0380011633.01.T01:CDS 35.0%
CTAGTAATCCGAAATTTGGT+TGG - Chr3:2739869-2739888 None:intergenic 35.0%
CTTAAGAAACATGGCATCAA+TGG + Chr3:2740407-2740426 MsG0380011633.01.T01:intron 35.0%
GAAAACATATGTGAACCTAC+TGG + Chr3:2742092-2742111 MsG0380011633.01.T01:intron 35.0%
GCTTAAACTGTGCTTATAAG+TGG + Chr3:2741809-2741828 MsG0380011633.01.T01:intron 35.0%
GTAAGACTGTTAGCATTGTT+TGG + Chr3:2740657-2740676 MsG0380011633.01.T01:intron 35.0%
TAAACTGTGCTTATAAGTGG+TGG + Chr3:2741812-2741831 MsG0380011633.01.T01:intron 35.0%
TACCATCTTAAAAGTTGGGT+TGG + Chr3:2739954-2739973 MsG0380011633.01.T01:intron 35.0%
TACCCAAATATCAGGAAGAT+TGG - Chr3:2738490-2738509 None:intergenic 35.0%
TATTCCAAAATGATACCCTC+CGG - Chr3:2738964-2738983 None:intergenic 35.0%
TCCCAATCTTCCTGATATTT+GGG + Chr3:2738485-2738504 MsG0380011633.01.T01:CDS 35.0%
TCGAAAGCTTGTGAAAAAGT+TGG + Chr3:2739553-2739572 MsG0380011633.01.T01:CDS 35.0%
TGAACAAATAACGTCTGAAG+CGG + Chr3:2741103-2741122 MsG0380011633.01.T01:CDS 35.0%
TGATGCCATGTTTCTTAAGT+TGG - Chr3:2740406-2740425 None:intergenic 35.0%
TGTAAGTCCTAAAAAGGATG+TGG + Chr3:2740773-2740792 MsG0380011633.01.T01:CDS 35.0%
TTGATATAGAGTGTGTTGAG+AGG - Chr3:2740065-2740084 None:intergenic 35.0%
! AATCCATCCACATCCTTTTT+AGG - Chr3:2740783-2740802 None:intergenic 35.0%
! AATCTTATATGGTGGGAATG+TGG + Chr3:2740299-2740318 MsG0380011633.01.T01:intron 35.0%
! AATTGGTGACAAAGTTGAAG+AGG - Chr3:2742247-2742266 None:intergenic 35.0%
! ATATCAACCATTTTCCACAC+AGG - Chr3:2740692-2740711 None:intergenic 35.0%
! ATCTTATATGGTGGGAATGT+GGG + Chr3:2740300-2740319 MsG0380011633.01.T01:intron 35.0%
! ATGTTGCTTATAAATGTGGC+CGG + Chr3:2738942-2738961 MsG0380011633.01.T01:intron 35.0%
! CAATTTTCGGATGGTCTAAA+CGG - Chr3:2741498-2741517 None:intergenic 35.0%
! GAGTCTATCTAAGATCCATT+AGG + Chr3:2741681-2741700 MsG0380011633.01.T01:intron 35.0%
! TAGCAATTGGTTTACCTTCA+AGG - Chr3:2739408-2739427 None:intergenic 35.0%
!! GTATGTTGGGATTTTGGAAA+GGG + Chr3:2742069-2742088 MsG0380011633.01.T01:intron 35.0%
!! GTTGAGTTTGTTATATAGGG+TGG - Chr3:2741939-2741958 None:intergenic 35.0%
!! TATGTTGGGATTTTGGAAAG+GGG + Chr3:2742070-2742089 MsG0380011633.01.T01:intron 35.0%
!! TGTATGTTGGGATTTTGGAA+AGG + Chr3:2742068-2742087 MsG0380011633.01.T01:intron 35.0%
!!! ATTCTGTTTTTAAGGCCAGT+AGG - Chr3:2742110-2742129 None:intergenic 35.0%
!!! TATCAGTTTTAGAGTTGTCG+AGG + Chr3:2740150-2740169 MsG0380011633.01.T01:intron 35.0%
AACGACATTGATATGCATGG+TGG - Chr3:2739105-2739124 None:intergenic 40.0%
AAGCCATATCTCATCCAATG+TGG - Chr3:2741793-2741812 None:intergenic 40.0%
AAGTGGCTGATGAGATAAGA+AGG + Chr3:2739443-2739462 MsG0380011633.01.T01:CDS 40.0%
AATCACCACGAACTATGTTC+GGG - Chr3:2741154-2741173 None:intergenic 40.0%
AATGAGACTAAACTGGTACC+GGG + Chr3:2742148-2742167 MsG0380011633.01.T01:intron 40.0%
ACCTGCAATAGCAATGAAGT+TGG - Chr3:2740963-2740982 None:intergenic 40.0%
ACGACATTGATATGCATGGT+GGG - Chr3:2739104-2739123 None:intergenic 40.0%
AGAAGGATGAAGAGTGACAT+TGG + Chr3:2739460-2739479 MsG0380011633.01.T01:CDS 40.0%
AGAGTAGTTACACAGGGAAA+GGG - Chr3:2741967-2741986 None:intergenic 40.0%
AGATTCTAATTCAGGTGCTC+TGG - Chr3:2739809-2739828 None:intergenic 40.0%
AGGGGCTAAGATTCTAATTC+AGG - Chr3:2739817-2739836 None:intergenic 40.0%
AGTCCTAAAAAGGATGTGGA+TGG + Chr3:2740777-2740796 MsG0380011633.01.T01:CDS 40.0%
ATAATGTGGGGACCAACTTT+AGG + Chr3:2738987-2739006 MsG0380011633.01.T01:intron 40.0%
ATAGGAAACCTTGCAAGAAG+TGG + Chr3:2740816-2740835 MsG0380011633.01.T01:CDS 40.0%
ATCCTGGTCGTCATTAAAAC+TGG - Chr3:2739644-2739663 None:intergenic 40.0%
ATTCCCCACTTATCTACACT+AGG - Chr3:2739060-2739079 None:intergenic 40.0%
ATTGGAGACTTTGTGGCAAA+AGG - Chr3:2738539-2738558 None:intergenic 40.0%
CAATAATTCCATGCACATCC+TGG - Chr3:2739660-2739679 None:intergenic 40.0%
CAATCACCACGAACTATGTT+CGG - Chr3:2741155-2741174 None:intergenic 40.0%
CACAAGCTTTCGACTTAAGA+TGG - Chr3:2739546-2739565 None:intergenic 40.0%
CGTGGTGATTGGATAAAGAA+AGG + Chr3:2741164-2741183 MsG0380011633.01.T01:CDS 40.0%
CTCTTCAAAGCAAACATCTC+CGG - Chr3:2742439-2742458 None:intergenic 40.0%
CTTACCTCCCAACCAAATTT+CGG + Chr3:2739858-2739877 MsG0380011633.01.T01:intron 40.0%
GAATGAAATGCAGCACAAGA+TGG + Chr3:2740359-2740378 MsG0380011633.01.T01:intron 40.0%
GAATGAGACTAAACTGGTAC+CGG + Chr3:2742147-2742166 MsG0380011633.01.T01:intron 40.0%
GACTCAAGATGGCTTAGTAA+TGG + Chr3:2740091-2740110 MsG0380011633.01.T01:intron 40.0%
GATAACACTGGATGCATTTG+AGG + Chr3:2738813-2738832 MsG0380011633.01.T01:intron 40.0%
GATATCATGGTCACAGATGT+TGG + Chr3:2741125-2741144 MsG0380011633.01.T01:CDS 40.0%
GCTTCAGACGTTATTTGTTC+AGG - Chr3:2741104-2741123 None:intergenic 40.0%
GGATTAACAGGTCTGGAAAA+AGG + Chr3:2740428-2740447 MsG0380011633.01.T01:intron 40.0%
GGTGTGCTAAAATTCCACAT+TGG + Chr3:2741776-2741795 MsG0380011633.01.T01:intron 40.0%
GTACAACTCACTAGCTCAAA+TGG - Chr3:2739135-2739154 None:intergenic 40.0%
GTCCCAATCTTCCTGATATT+TGG + Chr3:2738484-2738503 MsG0380011633.01.T01:CDS 40.0%
GTGAGGAAAATTAGACATCG+GGG - Chr3:2741991-2742010 None:intergenic 40.0%
GTGTAGATAAGTGGGGAATA+TGG + Chr3:2739061-2739080 MsG0380011633.01.T01:intron 40.0%
TAATCCGAAATTTGGTTGGG+AGG - Chr3:2739865-2739884 None:intergenic 40.0%
TAGCACACCTCTTCACTTAT+AGG - Chr3:2741765-2741784 None:intergenic 40.0%
TCCATGCATTCAGAAGGTAA+AGG - Chr3:2741266-2741285 None:intergenic 40.0%
TCCTTTACCTTCTGAATGCA+TGG + Chr3:2741262-2741281 MsG0380011633.01.T01:intron 40.0%
TCTGTAATCACTTCGTCAAG+TGG + Chr3:2741581-2741600 MsG0380011633.01.T01:intron 40.0%
TGAGGAAAATTAGACATCGG+GGG - Chr3:2741990-2742009 None:intergenic 40.0%
TGAGTTGTACTTGCAGGATT+GGG + Chr3:2739145-2739164 MsG0380011633.01.T01:intron 40.0%
TGCAACGACATTGATATGCA+TGG - Chr3:2739108-2739127 None:intergenic 40.0%
TGTCTAGGTACCCAAATATC+AGG - Chr3:2738498-2738517 None:intergenic 40.0%
TTGGAGACTTTGTGGCAAAA+GGG - Chr3:2738538-2738557 None:intergenic 40.0%
TTGGATAAAGAAAGGAGCTG+TGG + Chr3:2741172-2741191 MsG0380011633.01.T01:CDS 40.0%
TTTACCTTCTGAATGCATGG+AGG + Chr3:2741265-2741284 MsG0380011633.01.T01:intron 40.0%
! AAAGTTTCCTAGATTGGCTG+TGG + Chr3:2739483-2739502 MsG0380011633.01.T01:CDS 40.0%
! ACCAACTTCATTGCTATTGC+AGG + Chr3:2740959-2740978 MsG0380011633.01.T01:CDS 40.0%
! ATCAAGAGTGTGACTCAAGA+TGG + Chr3:2740080-2740099 MsG0380011633.01.T01:intron 40.0%
! GGCTCTAGTAATCCGAAATT+TGG - Chr3:2739873-2739892 None:intergenic 40.0%
! GTTAGCATTGTTTGGTGATC+TGG + Chr3:2740665-2740684 MsG0380011633.01.T01:intron 40.0%
! GTTTTCTTCCACTTCTTGCA+AGG - Chr3:2740827-2740846 None:intergenic 40.0%
! TTTGTGGCAAAAGGGTATGA+GGG - Chr3:2738530-2738549 None:intergenic 40.0%
! TTTTGCGGAATCAAGTGTGT+TGG - Chr3:2742535-2742554 None:intergenic 40.0%
!! AGAAGCATCGATACTGTAAC+TGG - Chr3:2742510-2742529 None:intergenic 40.0%
!! CATCAATGGATTAACAGGTC+TGG + Chr3:2740421-2740440 MsG0380011633.01.T01:intron 40.0%
!! CATGGCATCAATGGATTAAC+AGG + Chr3:2740416-2740435 MsG0380011633.01.T01:intron 40.0%
!! GAGTTTGTTATATAGGGTGG+AGG - Chr3:2741936-2741955 None:intergenic 40.0%
!! GATAGTGATAGGGTTTTGTG+CGG + Chr3:2740230-2740249 MsG0380011633.01.T01:intron 40.0%
!! TTTTGCCGTCTTTTGAGTAG+AGG + Chr3:2741036-2741055 MsG0380011633.01.T01:intron 40.0%
!!! GGTTTTGGTTGGTGATAGAA+GGG + Chr3:2739504-2739523 MsG0380011633.01.T01:CDS 40.0%
!!! TGGTTTTGGTTGGTGATAGA+AGG + Chr3:2739503-2739522 MsG0380011633.01.T01:CDS 40.0%
ACCAAAACCACAGCCAATCT+AGG - Chr3:2739493-2739512 None:intergenic 45.0%
ACGAAGTGGTTGGACTCAAA+TGG + Chr3:2739754-2739773 MsG0380011633.01.T01:intron 45.0%
ACGTGCCTAGTGTAGATAAG+TGG + Chr3:2739052-2739071 MsG0380011633.01.T01:intron 45.0%
AGCTAGTGAGTTGTACTTGC+AGG + Chr3:2739139-2739158 MsG0380011633.01.T01:intron 45.0%
AGTACCTCCATGCATTCAGA+AGG - Chr3:2741272-2741291 None:intergenic 45.0%
ATCGGAAGGGGTAAAATTGC+AGG + Chr3:2740933-2740952 MsG0380011633.01.T01:CDS 45.0%
ATCTGGACCTGTGTGGAAAA+TGG + Chr3:2740682-2740701 MsG0380011633.01.T01:intron 45.0%
CAATAGACGCAACAACACAG+AGG + Chr3:2742323-2742342 MsG0380011633.01.T01:intron 45.0%
CACCTCTTCACTTATAGGAC+TGG - Chr3:2741760-2741779 None:intergenic 45.0%
CGAACATAGTTCGTGGTGAT+TGG + Chr3:2741153-2741172 MsG0380011633.01.T01:CDS 45.0%
CGACATTGATATGCATGGTG+GGG - Chr3:2739103-2739122 None:intergenic 45.0%
CGTGCCTAGTGTAGATAAGT+GGG + Chr3:2739053-2739072 MsG0380011633.01.T01:intron 45.0%
CTCTCTCTCAATTTCCATCC+CGG - Chr3:2742169-2742188 None:intergenic 45.0%
GACATTGATATGCATGGTGG+GGG - Chr3:2739102-2739121 None:intergenic 45.0%
GAGAGTAGTTACACAGGGAA+AGG - Chr3:2741968-2741987 None:intergenic 45.0%
GAGGCACAAGGGATAAAGAA+GGG - Chr3:2740849-2740868 None:intergenic 45.0%
GATAGGAATGACTGGATAGC+AGG - Chr3:2741710-2741729 None:intergenic 45.0%
GATTCCGCAAAACGTGCATT+CGG + Chr3:2742543-2742562 MsG0380011633.01.T01:CDS 45.0%
GCTATCCAGTCATTCCTATC+AGG + Chr3:2741710-2741729 MsG0380011633.01.T01:intron 45.0%
GTCCAGTCCTATAAGTGAAG+AGG + Chr3:2741755-2741774 MsG0380011633.01.T01:intron 45.0%
GTGAGTTGTACTTGCAGGAT+TGG + Chr3:2739144-2739163 MsG0380011633.01.T01:intron 45.0%
GTGCCTAGTGTAGATAAGTG+GGG + Chr3:2739054-2739073 MsG0380011633.01.T01:intron 45.0%
TCTTTATCCCTTGTGCCTCA+AGG + Chr3:2740850-2740869 MsG0380011633.01.T01:CDS 45.0%
TGAGGCACAAGGGATAAAGA+AGG - Chr3:2740850-2740869 None:intergenic 45.0%
TGCTTATAAATGTGGCCGGA+GGG + Chr3:2738946-2738965 MsG0380011633.01.T01:intron 45.0%
TGGTGCCTCTACTCAAAAGA+CGG - Chr3:2741044-2741063 None:intergenic 45.0%
TTGCTTATAAATGTGGCCGG+AGG + Chr3:2738945-2738964 MsG0380011633.01.T01:intron 45.0%
TTTCTTGCAGCATCTTGACG+AGG + Chr3:2740734-2740753 MsG0380011633.01.T01:intron 45.0%
! AACGTCTGAAGCGGATATCA+TGG + Chr3:2741112-2741131 MsG0380011633.01.T01:CDS 45.0%
! AGGACTGGACATCTAGAATG+TGG - Chr3:2741745-2741764 None:intergenic 45.0%
! CTTTGAAGAGGCAGTCAAAG+TGG + Chr3:2742449-2742468 MsG0380011633.01.T01:CDS 45.0%
! CTTTGTGGCAAAAGGGTATG+AGG - Chr3:2738531-2738550 None:intergenic 45.0%
! GATTCCGAATGCACGTTTTG+CGG - Chr3:2742550-2742569 None:intergenic 45.0%
! GTGTGTTGAGAGGTTCTAAC+TGG - Chr3:2740055-2740074 None:intergenic 45.0%
! TTGTGGCAAAAGGGTATGAG+GGG - Chr3:2738529-2738548 None:intergenic 45.0%
!! AGAGGAGGACTAGTTCCTTA+TGG + Chr3:2742341-2742360 MsG0380011633.01.T01:intron 45.0%
!! ATCGGGAGTGTCTGCTTATA+AGG + Chr3:2741544-2741563 MsG0380011633.01.T01:intron 45.0%
!! CGGAGATGTTTGCTTTGAAG+AGG + Chr3:2742437-2742456 MsG0380011633.01.T01:CDS 45.0%
!! CTCCAGTTTTAATGACGACC+AGG + Chr3:2739639-2739658 MsG0380011633.01.T01:CDS 45.0%
!! CTCTTTCTGGGATAGTAGCA+TGG + Chr3:2738394-2738413 MsG0380011633.01.T01:CDS 45.0%
!! CTTAGTAATGGGTGACCCAA+TGG + Chr3:2740103-2740122 MsG0380011633.01.T01:intron 45.0%
!! GCCCAACCCAACTTTTAAGA+TGG - Chr3:2739959-2739978 None:intergenic 45.0%
!! TCCTAGATTGGCTGTGGTTT+TGG + Chr3:2739489-2739508 MsG0380011633.01.T01:CDS 45.0%
!!! AGATTGGCTGTGGTTTTGGT+TGG + Chr3:2739493-2739512 MsG0380011633.01.T01:CDS 45.0%
!!! AGTTAAATATTTTTTTTTTT+TGG + Chr3:2738647-2738666 MsG0380011633.01.T01:intron 5.0%
!!! TTATTTTTATGTAATTTTTA+GGG + Chr3:2739353-2739372 MsG0380011633.01.T01:intron 5.0%
!!! TTTATTTTTATGTAATTTTT+AGG + Chr3:2739352-2739371 MsG0380011633.01.T01:intron 5.0%
AATGACGACCAGGATGTGCA+TGG + Chr3:2739649-2739668 MsG0380011633.01.T01:CDS 50.0%
AGCAAACATCTCCGGTGACA+CGG - Chr3:2742431-2742450 None:intergenic 50.0%
AGGAATGACTGGATAGCAGG+TGG - Chr3:2741707-2741726 None:intergenic 50.0%
AGGAGCTGTGGTCATTGACA+TGG + Chr3:2741184-2741203 MsG0380011633.01.T01:CDS 50.0%
AGTCATTCCTATCAGGCCAC+TGG + Chr3:2741717-2741736 MsG0380011633.01.T01:intron 50.0%
AGTGGCATCAGCCATTACTC+CGG + Chr3:2742467-2742486 MsG0380011633.01.T01:CDS 50.0%
AGTGGCCTGATAGGAATGAC+TGG - Chr3:2741718-2741737 None:intergenic 50.0%
CAACTCAATGCAGCTCCTTG+AGG - Chr3:2740868-2740887 None:intergenic 50.0%
CACAGTGCTGCAATCCTTGA+AGG + Chr3:2739391-2739410 MsG0380011633.01.T01:CDS 50.0%
CTTCAAGGATTGCAGCACTG+TGG - Chr3:2739393-2739412 None:intergenic 50.0%
GAACCGGAGGGTTAAGACTT+AGG + Chr3:2739905-2739924 MsG0380011633.01.T01:intron 50.0%
GGAATCCCGAACATAGTTCG+TGG + Chr3:2741146-2741165 MsG0380011633.01.T01:CDS 50.0%
GGAGCTGTGGTCATTGACAT+GGG + Chr3:2741185-2741204 MsG0380011633.01.T01:CDS 50.0%
GGTCCTAAGTCTTAACCCTC+CGG - Chr3:2739911-2739930 None:intergenic 50.0%
GTCATTCCTATCAGGCCACT+GGG + Chr3:2741718-2741737 MsG0380011633.01.T01:intron 50.0%
TAGACGCAACAACACAGAGG+AGG + Chr3:2742326-2742345 MsG0380011633.01.T01:intron 50.0%
TCATTCCTATCAGGCCACTG+GGG + Chr3:2741719-2741738 MsG0380011633.01.T01:intron 50.0%
TCTTAACCCTCCGGTTCTCT+GGG - Chr3:2739902-2739921 None:intergenic 50.0%
! AGACTAAACTGGTACCGGGA+TGG + Chr3:2742152-2742171 MsG0380011633.01.T01:intron 50.0%
! TTTGGTGATCTGGACCTGTG+TGG + Chr3:2740675-2740694 MsG0380011633.01.T01:intron 50.0%
ACACGGAAGACTTGGCTGCT+AGG - Chr3:2742414-2742433 None:intergenic 55.0%
AGCCAAGTCTTCCGTGTCAC+CGG + Chr3:2742417-2742436 MsG0380011633.01.T01:CDS 55.0%
AGCCTCTTTCCCCAGAGAAC+CGG + Chr3:2739889-2739908 MsG0380011633.01.T01:intron 55.0%
ATGCAGCTCCTTGAGGCACA+AGG - Chr3:2740861-2740880 None:intergenic 55.0%
CACGGAAGACTTGGCTGCTA+GGG - Chr3:2742413-2742432 None:intergenic 55.0%
CGCATGTAACAAGCTGACCG+TGG - Chr3:2741069-2741088 None:intergenic 55.0%
CGGGGGAGAGTAGTTACACA+GGG - Chr3:2741973-2741992 None:intergenic 55.0%
CTGGATAGCAGGTGGCCTAA+TGG - Chr3:2741699-2741718 None:intergenic 55.0%
CTTAACCCTCCGGTTCTCTG+GGG - Chr3:2739901-2739920 None:intergenic 55.0%
GGCACGTGAGTCAAGCTACT+AGG - Chr3:2739039-2739058 None:intergenic 55.0%
GTCTTAACCCTCCGGTTCTC+TGG - Chr3:2739903-2739922 None:intergenic 55.0%
TCAGCCATTACTCCGGTTCC+TGG + Chr3:2742474-2742493 MsG0380011633.01.T01:CDS 55.0%
TCGGGGGAGAGTAGTTACAC+AGG - Chr3:2741974-2741993 None:intergenic 55.0%
TCTTTCCCCAGAGAACCGGA+GGG + Chr3:2739893-2739912 MsG0380011633.01.T01:intron 55.0%
TGCAGCTCCTTGAGGCACAA+GGG - Chr3:2740860-2740879 None:intergenic 55.0%
! CATCTAGAATGTGGCCCCAG+TGG - Chr3:2741736-2741755 None:intergenic 55.0%
!! TGAGGGGAAGTGCTGTGTCT+AGG - Chr3:2738513-2738532 None:intergenic 55.0%
!!! GTGGCCGGAGGGTATCATTT+TGG + Chr3:2738957-2738976 MsG0380011633.01.T01:intron 55.0%
AGACTTGGCTGCTAGGGTCC+TGG - Chr3:2742407-2742426 None:intergenic 60.0%
CTCCGGTGACACGGAAGACT+TGG - Chr3:2742422-2742441 None:intergenic 60.0%
CTCTTTCCCCAGAGAACCGG+AGG + Chr3:2739892-2739911 MsG0380011633.01.T01:intron 60.0%
GCCATTACTCCGGTTCCTGG+AGG + Chr3:2742477-2742496 MsG0380011633.01.T01:CDS 60.0%
GCCTCCAGGAACCGGAGTAA+TGG - Chr3:2742481-2742500 None:intergenic 60.0%
GTAACAAGCTGACCGTGGCG+TGG - Chr3:2741064-2741083 None:intergenic 60.0%
GTAACTGGTCCTACGCCTCC+AGG - Chr3:2742495-2742514 None:intergenic 60.0%
! CTCCGGTTCTCTGGGGAAAG+AGG - Chr3:2739894-2739913 None:intergenic 60.0%
!! TGAGTAGAGGCACCACGCCA+CGG + Chr3:2741049-2741068 MsG0380011633.01.T01:intron 60.0%
GGTCCTACGCCTCCAGGAAC+CGG - Chr3:2742489-2742508 None:intergenic 65.0%
TGTGGCCCCAGTGGCCTGAT+AGG - Chr3:2741727-2741746 None:intergenic 65.0%
! ACTCCGGTTCCTGGAGGCGT+AGG + Chr3:2742483-2742502 MsG0380011633.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 2738369 2742575 2738369 ID=MsG0380011633.01;Name=MsG0380011633.01
Chr3 mRNA 2738369 2742575 2738369 ID=MsG0380011633.01.T01;Parent=MsG0380011633.01;Name=MsG0380011633.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|0.75|0.8|5|0|362
Chr3 exon 2738369 2738558 2738369 ID=MsG0380011633.01.T01:exon:840;Parent=MsG0380011633.01.T01
Chr3 exon 2739374 2739699 2739374 ID=MsG0380011633.01.T01:exon:841;Parent=MsG0380011633.01.T01
Chr3 exon 2740744 2740980 2740744 ID=MsG0380011633.01.T01:exon:842;Parent=MsG0380011633.01.T01
Chr3 exon 2741056 2741223 2741056 ID=MsG0380011633.01.T01:exon:843;Parent=MsG0380011633.01.T01
Chr3 exon 2742408 2742575 2742408 ID=MsG0380011633.01.T01:exon:844;Parent=MsG0380011633.01.T01
Chr3 CDS 2738369 2738558 2738369 ID=MsG0380011633.01.T01:cds;Parent=MsG0380011633.01.T01
Chr3 CDS 2739374 2739699 2739374 ID=MsG0380011633.01.T01:cds;Parent=MsG0380011633.01.T01
Chr3 CDS 2740744 2740980 2740744 ID=MsG0380011633.01.T01:cds;Parent=MsG0380011633.01.T01
Chr3 CDS 2741056 2741223 2741056 ID=MsG0380011633.01.T01:cds;Parent=MsG0380011633.01.T01
Chr3 CDS 2742408 2742575 2742408 ID=MsG0380011633.01.T01:cds;Parent=MsG0380011633.01.T01
Gene Sequence

>MsG0380011633.01.T01

ATGAGAAAAGCTTTGCATTTTCATTCTCTTTCTGGGATAGTAGCATGGCATAAAACTCTCAGAAAAGCATTGCATTTGCATTCTTTTTCTTCTCAACATTCTTCTACTTTTCTTGGTCCCAATCTTCCTGATATTTGGGTACCTAGACACAGCACTTCCCCTCATACCCTTTTGCCACAAAGTCTCCAATGGACTGATAATGATGACCACAGTGCTGCAATCCTTGAAGGTAAACCAATTGCTAATCACATAAAATTGAAAGTGGCTGATGAGATAAGAAGGATGAAGAGTGACATTGGAAAGTTTCCTAGATTGGCTGTGGTTTTGGTTGGTGATAGAAGGGATTCTCACACTTTCATCCATCTTAAGTCGAAAGCTTGTGAAAAAGTTGGCATTAAAACTGTGGTTTCACAGTTGCCAGAAAATTGCACTGAAAATGAACTTCTTGATGTTGTCTCCAGTTTTAATGACGACCAGGATGTGCATGGAATTATTGTGCAACTCCCTCTACCTCAACATCTTGACGAGGAAAAAATTATGAACATTGTAAGTCCTAAAAAGGATGTGGATGGATTTCATCCTTTAAATATAGGAAACCTTGCAAGAAGTGGAAGAAAACCCTTCTTTATCCCTTGTGCCTCAAGGAGCTGCATTGAGTTGTTACTTAATCATGGTATTGAAATCAGAGGGAAAAAAGTTGCAATAATCGGAAGGGGTAAAATTGCAGGATTACCAACTTCATTGCTATTGCAGAGGCACCACGCCACGGTCAGCTTGTTACATGCGTACACAAAGAATCCTGAACAAATAACGTCTGAAGCGGATATCATGGTCACAGATGTTGGAATCCCGAACATAGTTCGTGGTGATTGGATAAAGAAAGGAGCTGTGGTCATTGACATGGGAACAAATCAAGTTAAGGACCCTAGCAGCCAAGTCTTCCGTGTCACCGGAGATGTTTGCTTTGAAGAGGCAGTCAAAGTGGCATCAGCCATTACTCCGGTTCCTGGAGGCGTAGGACCAGTTACAGTATCGATGCTTCTCTCCAACACACTTGATTCCGCAAAACGTGCATTCGGAATCGTTTGA
Protein sequence

>MsG0380011633.01.T01

MRKALHFHSLSGIVAWHKTLRKALHLHSFSSQHSSTFLGPNLPDIWVPRHSTSPHTLLPQSLQWTDNDDHSAAILEGKPIANHIKLKVADEIRRMKSDIGKFPRLAVVLVGDRRDSHTFIHLKSKACEKVGIKTVVSQLPENCTENELLDVVSSFNDDQDVHGIIVQLPLPQHLDEEKIMNIVSPKKDVDGFHPLNIGNLARSGRKPFFIPCASRSCIELLLNHGIEIRGKKVAIIGRGKIAGLPTSLLLQRHHATVSLLHAYTKNPEQITSEADIMVTDVGIPNIVRGDWIKKGAVVIDMGTNQVKDPSSQVFRVTGDVCFEEAVKVASAITPVPGGVGPVTVSMLLSNTLDSAKRAFGIV*