AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012363.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012363.01.T01 MTR_3g022300 75.465 269 37 3 55 295 601 868 1.63e-124 384
MsG0380012363.01.T01 MTR_3g022230 72.364 275 47 3 48 295 584 856 7.76e-120 376
MsG0380012363.01.T01 MTR_0425s0020 64.968 314 62 5 13 295 575 871 5.01e-119 370
MsG0380012363.01.T01 MTR_3g027200 67.474 289 53 5 48 295 583 871 3.76e-117 363
MsG0380012363.01.T01 MTR_3g023030 69.258 283 52 4 48 295 550 832 4.41e-116 360
MsG0380012363.01.T01 MTR_3g023030 69.258 283 52 4 48 295 584 866 7.55e-116 360
MsG0380012363.01.T01 MTR_3g022600 62.813 320 65 5 13 295 575 877 1.18e-113 355
MsG0380012363.01.T01 MTR_3g022240 79.897 194 37 2 103 295 1 193 3.01e-104 309
MsG0380012363.01.T01 MTR_3g022130 61.131 283 76 4 47 295 558 840 7.09e-99 313
MsG0380012363.01.T01 MTR_3g022060 61.567 268 83 4 48 295 486 753 2.80e-93 298
MsG0380012363.01.T01 MTR_3g027470 58.865 282 59 6 48 296 490 747 1.22e-90 290
MsG0380012363.01.T01 MTR_3g027420 56.940 281 77 6 53 295 577 851 2.03e-83 272
MsG0380012363.01.T01 MTR_3g022790 54.804 281 82 8 52 295 582 854 1.12e-79 263
MsG0380012363.01.T01 MTR_3g019040 52.857 280 96 5 48 295 584 859 1.19e-79 261
MsG0380012363.01.T01 MTR_3g027250 54.286 280 90 7 52 295 573 850 1.37e-79 261
MsG0380012363.01.T01 MTR_3g021100 53.763 279 93 5 53 295 581 859 5.48e-79 260
MsG0380012363.01.T01 MTR_3g035810 52.055 292 102 6 41 295 545 835 3.63e-78 256
MsG0380012363.01.T01 MTR_3g024460 53.147 286 90 8 49 295 187 467 5.55e-77 249
MsG0380012363.01.T01 MTR_3g022940 51.254 279 100 5 53 295 573 851 8.25e-77 254
MsG0380012363.01.T01 MTR_7g021000 53.875 271 81 6 53 284 584 849 2.76e-76 249
MsG0380012363.01.T01 MTR_3g021380 52.857 280 94 6 53 295 563 841 3.47e-75 249
MsG0380012363.01.T01 MTR_7g021000 52.837 282 89 6 53 295 584 860 3.61e-75 249
MsG0380012363.01.T01 MTR_3g025360 50.704 284 104 5 48 295 597 880 7.90e-75 248
MsG0380012363.01.T01 MTR_3g022740 53.846 286 65 10 48 295 304 560 3.86e-73 238
MsG0380012363.01.T01 MTR_3g021340 51.079 278 94 6 53 295 575 845 5.13e-72 240
MsG0380012363.01.T01 MTR_3g021170 51.254 279 98 6 53 295 576 852 2.45e-71 238
MsG0380012363.01.T01 MTR_3g022870 50.179 279 103 5 53 295 573 851 2.72e-71 238
MsG0380012363.01.T01 MTR_3g022920 50.538 279 102 5 53 295 566 844 5.49e-71 237
MsG0380012363.01.T01 MTR_3g022400 48.944 284 109 5 48 295 565 848 7.10e-71 237
MsG0380012363.01.T01 MTR_3g022400 48.944 284 109 5 48 295 565 848 1.15e-70 236
MsG0380012363.01.T01 MTR_3g022570 46.644 298 123 5 34 295 592 889 1.51e-70 236
MsG0380012363.01.T01 MTR_3g015260 48.571 280 105 5 48 295 585 857 1.23e-69 233
MsG0380012363.01.T01 MTR_3g019000 51.449 276 99 6 55 296 589 863 2.33e-69 233
MsG0380012363.01.T01 MTR_3g015260 48.571 280 105 5 48 295 585 857 2.61e-69 233
MsG0380012363.01.T01 MTR_1643s0010 58.333 204 72 4 99 295 1 198 6.30e-69 217
MsG0380012363.01.T01 MTR_3g021400 49.013 304 108 7 39 295 541 844 3.63e-68 229
MsG0380012363.01.T01 MTR_3g022870 52.400 250 105 5 53 295 573 815 6.76e-68 229
MsG0380012363.01.T01 MTR_3g018970 50.193 259 94 6 65 289 54 311 5.35e-65 212
MsG0380012363.01.T01 MTR_3g018980 48.763 283 102 7 48 296 584 857 2.10e-64 218
MsG0380012363.01.T01 MTR_3g018980 48.763 283 102 7 48 296 584 857 7.62e-64 217
MsG0380012363.01.T01 MTR_3g018930 48.070 285 104 7 48 295 586 863 5.44e-63 215
MsG0380012363.01.T01 MTR_3g021330 47.407 270 92 6 60 295 175 428 1.77e-62 207
MsG0380012363.01.T01 MTR_8g038590 40.345 290 129 11 48 295 592 879 2.07e-46 167
MsG0380012363.01.T01 MTR_8g446950 42.264 265 135 9 50 296 631 895 1.13e-45 165
MsG0380012363.01.T01 MTR_3g022590 52.809 178 76 3 77 246 13 190 5.48e-45 158
MsG0380012363.01.T01 MTR_0137s0070 42.045 264 136 7 50 296 33 296 3.57e-44 159
MsG0380012363.01.T01 MTR_3g014080 42.045 264 136 7 50 296 615 878 6.89e-44 160
MsG0380012363.01.T01 MTR_0137s0070 42.045 264 136 7 50 296 33 296 7.15e-44 159
MsG0380012363.01.T01 MTR_3g014080 42.045 264 136 7 50 296 615 878 7.82e-44 160
MsG0380012363.01.T01 MTR_0002s0090 41.573 267 131 10 50 295 608 870 1.00e-43 159
MsG0380012363.01.T01 MTR_3g035500 41.573 267 131 10 50 295 608 870 1.00e-43 159
MsG0380012363.01.T01 MTR_3g032370 38.754 289 130 9 52 295 584 870 1.22e-43 159
MsG0380012363.01.T01 MTR_3g032150 38.754 289 130 9 52 295 584 870 1.59e-43 159
MsG0380012363.01.T01 MTR_3g032200 39.649 285 127 8 55 295 592 875 2.88e-43 158
MsG0380012363.01.T01 MTR_3g034430 42.164 268 132 9 50 296 607 872 3.36e-43 158
MsG0380012363.01.T01 MTR_3g031940 38.889 288 131 8 52 295 589 875 8.59e-43 157
MsG0380012363.01.T01 MTR_3g032800 38.144 291 135 8 49 295 583 872 1.14e-42 156
MsG0380012363.01.T01 MTR_3g033080 39.655 290 131 8 49 295 586 874 1.16e-42 156
MsG0380012363.01.T01 MTR_3g033240 37.544 285 133 8 55 295 592 875 4.69e-42 155
MsG0380012363.01.T01 MTR_3g435720 38.947 285 129 9 55 295 589 872 7.69e-42 154
MsG0380012363.01.T01 MTR_3g435740 38.028 284 133 8 55 295 633 916 9.12e-42 154
MsG0380012363.01.T01 MTR_3g030980 41.199 267 135 8 50 295 607 872 1.26e-41 153
MsG0380012363.01.T01 MTR_3g030960 39.362 282 127 8 57 295 591 871 2.25e-41 153
MsG0380012363.01.T01 MTR_4g050410 38.462 286 131 9 55 296 587 871 4.07e-41 152
MsG0380012363.01.T01 MTR_3g036050 40.449 267 138 9 50 296 218 483 4.82e-41 152
MsG0380012363.01.T01 MTR_3g028040 41.111 270 132 10 50 296 607 872 5.46e-41 152
MsG0380012363.01.T01 MTR_8g030860 38.832 291 133 9 49 295 589 878 5.75e-41 151
MsG0380012363.01.T01 MTR_3g011620 41.633 245 128 8 52 282 614 857 8.61e-41 151
MsG0380012363.01.T01 MTR_3g033380 37.931 290 137 8 49 295 587 876 9.19e-41 151
MsG0380012363.01.T01 MTR_3g032760 37.979 287 134 9 52 295 586 871 9.62e-41 151
MsG0380012363.01.T01 MTR_3g035960 40.672 268 133 10 50 295 606 869 1.10e-40 150
MsG0380012363.01.T01 MTR_3g032500 38.163 283 130 8 57 295 595 876 1.20e-40 150
MsG0380012363.01.T01 MTR_3g018930 47.619 210 74 5 48 221 586 795 1.94e-40 150
MsG0380012363.01.T01 MTR_3g032960 37.413 286 132 9 55 295 589 872 2.15e-40 150
MsG0380012363.01.T01 MTR_8g038570 42.701 274 117 8 60 295 611 882 2.29e-40 150
MsG0380012363.01.T01 MTR_3g033860 40.299 268 135 9 50 295 607 871 2.60e-40 150
MsG0380012363.01.T01 MTR_3g032340 38.305 295 134 10 47 295 631 923 2.61e-40 150
MsG0380012363.01.T01 MTR_0603s0010 39.623 265 140 9 50 295 668 931 2.76e-40 149
MsG0380012363.01.T01 MTR_3g032110 38.305 295 134 10 47 295 628 920 5.61e-40 149
MsG0380012363.01.T01 MTR_3g034460 37.543 293 135 9 49 296 567 856 6.16e-40 149
MsG0380012363.01.T01 MTR_0005s0200 37.687 268 133 6 48 283 598 863 1.57e-39 147
MsG0380012363.01.T01 MTR_3g020620 39.847 261 140 8 52 295 758 1018 2.27e-39 147
MsG0380012363.01.T01 MTR_1g047800 38.559 236 133 7 62 288 617 849 4.55e-39 146
MsG0380012363.01.T01 MTR_3g034380 37.113 291 137 9 49 295 582 870 1.57e-38 144
MsG0380012363.01.T01 MTR_0002s0110 39.474 266 139 9 50 295 608 871 1.90e-38 144
MsG0380012363.01.T01 MTR_3g035480 39.474 266 139 9 50 295 608 871 1.97e-38 144
MsG0380012363.01.T01 MTR_3g035940 39.474 266 139 9 50 295 608 871 2.15e-38 144
MsG0380012363.01.T01 MTR_1g045960 39.068 279 131 9 57 296 562 840 3.28e-38 144
MsG0380012363.01.T01 MTR_0002s0120 39.474 266 139 9 50 295 391 654 3.58e-38 143
MsG0380012363.01.T01 MTR_2g063777 36.301 292 139 9 49 295 580 869 5.30e-38 143
MsG0380012363.01.T01 MTR_4g019360 36.525 282 139 8 54 295 511 792 5.56e-38 143
MsG0380012363.01.T01 MTR_1g008240 39.326 267 136 9 50 295 592 853 7.69e-38 142
MsG0380012363.01.T01 MTR_3g071130 38.846 260 143 7 50 295 591 848 9.38e-38 142
MsG0380012363.01.T01 MTR_6g084550 39.700 267 139 9 50 296 592 856 1.23e-37 142
MsG0380012363.01.T01 MTR_3g435220 39.394 264 142 8 51 296 567 830 1.27e-37 142
MsG0380012363.01.T01 MTR_3g071070 38.846 260 143 7 50 295 386 643 1.66e-37 141
MsG0380012363.01.T01 MTR_3g033110 38.636 264 139 8 55 295 588 851 1.68e-37 141
MsG0380012363.01.T01 MTR_3g020890 37.984 258 144 7 54 295 602 859 2.73e-37 141
MsG0380012363.01.T01 MTR_3g014390 35.315 286 146 7 49 295 583 868 1.07e-36 139
MsG0380012363.01.T01 MTR_3g014320 38.462 247 134 8 50 282 609 851 1.46e-36 139
MsG0380012363.01.T01 MTR_3g014040 38.889 270 126 7 52 283 579 847 4.46e-36 137
MsG0380012363.01.T01 MTR_2g038760 36.552 290 139 10 49 295 598 885 1.45e-35 136
MsG0380012363.01.T01 MTR_0137s0010 38.951 267 124 7 55 283 136 401 1.95e-35 135
MsG0380012363.01.T01 MTR_7g078790 37.594 266 145 8 50 295 594 858 4.14e-35 134
MsG0380012363.01.T01 MTR_2g038930 36.131 274 134 8 49 283 424 695 4.36e-35 134
MsG0380012363.01.T01 MTR_1g037610 34.708 291 138 9 55 295 592 880 5.88e-35 134
MsG0380012363.01.T01 MTR_2g038900 36.131 274 134 8 49 283 587 858 9.13e-35 134
MsG0380012363.01.T01 MTR_2g014840 34.629 283 134 7 58 295 588 864 2.79e-34 132
MsG0380012363.01.T01 MTR_0267s0070 37.209 258 121 7 55 271 597 854 3.86e-34 132
MsG0380012363.01.T01 MTR_8g106550 36.042 283 118 8 55 295 525 786 5.77e-34 131
MsG0380012363.01.T01 MTR_2g039090 36.082 291 140 10 49 295 571 859 8.55e-34 130
MsG0380012363.01.T01 MTR_5g037590 38.397 237 132 7 50 274 568 802 5.39e-33 128
MsG0380012363.01.T01 MTR_5g095910 37.143 245 133 7 55 283 615 854 2.64e-32 126
MsG0380012363.01.T01 MTR_3g014470 36.293 259 127 7 55 277 542 798 4.66e-32 125
MsG0380012363.01.T01 MTR_3g014510 34.286 280 130 8 55 295 592 856 3.27e-31 123
MsG0380012363.01.T01 MTR_3g014360 37.104 221 126 6 50 259 594 812 6.22e-31 122
MsG0380012363.01.T01 MTR_6g046130 38.034 234 124 8 76 296 607 832 1.53e-30 121
MsG0380012363.01.T01 MTR_6g047450 35.581 267 144 9 50 296 579 837 1.97e-30 121
MsG0380012363.01.T01 MTR_0144s0060 36.245 229 135 7 76 296 607 832 2.72e-30 120
MsG0380012363.01.T01 MTR_3g436130 40.964 166 94 4 96 258 25 189 6.53e-30 112
MsG0380012363.01.T01 MTR_6g046620 35.652 230 137 7 75 296 560 786 8.68e-30 119
MsG0380012363.01.T01 MTR_3g007190 36.604 265 129 9 52 296 482 727 1.08e-29 119
MsG0380012363.01.T01 MTR_0083s0120 41.905 210 105 8 54 251 160 364 1.50e-29 118
MsG0380012363.01.T01 MTR_1g078450 48.855 131 61 2 99 223 1 131 1.51e-29 113
MsG0380012363.01.T01 MTR_6g046480 34.749 259 154 8 50 296 580 835 7.23e-29 116
MsG0380012363.01.T01 MTR_3g033130 35.907 259 119 8 55 295 587 816 8.56e-29 116
MsG0380012363.01.T01 MTR_2g078070 34.643 280 131 10 50 283 579 852 4.31e-28 114
MsG0380012363.01.T01 MTR_6g046930 33.588 262 159 8 48 296 574 833 8.47e-28 113
MsG0380012363.01.T01 MTR_1g023600 38.961 231 124 9 78 295 615 841 2.44e-27 112
MsG0380012363.01.T01 MTR_5g070490 36.538 260 147 8 50 295 583 838 2.55e-27 112
MsG0380012363.01.T01 MTR_1g022380 36.502 263 146 10 50 295 581 839 3.03e-27 112
MsG0380012363.01.T01 MTR_0133s0030 32.517 286 168 11 32 296 555 836 4.40e-27 111
MsG0380012363.01.T01 MTR_3g435210 36.842 228 124 9 54 262 394 620 2.26e-26 109
MsG0380012363.01.T01 MTR_2g060700 36.214 243 118 10 58 283 369 591 2.87e-26 108
MsG0380012363.01.T01 MTR_5g071670 37.786 262 143 9 50 295 577 834 4.25e-26 108
MsG0380012363.01.T01 MTR_8g039260 36.680 259 122 11 57 296 135 370 4.47e-26 108
MsG0380012363.01.T01 MTR_2g014730 32.353 272 118 8 58 296 553 791 5.97e-26 108
MsG0380012363.01.T01 MTR_6g046440 34.050 279 159 12 40 296 505 780 7.45e-26 107
MsG0380012363.01.T01 MTR_5g072140 35.907 259 150 7 50 295 546 801 1.18e-25 107
MsG0380012363.01.T01 MTR_0230s0010 33.468 248 152 7 59 295 536 781 1.81e-25 106
MsG0380012363.01.T01 MTR_5g071800 35.769 260 149 8 50 295 586 841 1.83e-25 106
MsG0380012363.01.T01 MTR_6g052760 33.065 248 153 7 59 295 595 840 3.51e-25 105
MsG0380012363.01.T01 MTR_3g070590 33.858 254 112 7 55 295 596 806 5.29e-25 105
MsG0380012363.01.T01 MTR_5g072340 36.923 260 146 8 50 295 588 843 7.86e-25 104
MsG0380012363.01.T01 MTR_8g036195 35.433 254 144 10 53 295 576 820 7.95e-25 104
MsG0380012363.01.T01 MTR_3g086070 35.193 233 135 8 76 296 608 836 8.14e-25 104
MsG0380012363.01.T01 MTR_3g034650 35.075 268 134 10 49 295 130 378 8.44e-25 104
MsG0380012363.01.T01 MTR_6g052455 34.000 250 148 8 59 295 485 730 9.95e-25 104
MsG0380012363.01.T01 MTR_5g071780 37.247 247 134 9 50 281 585 825 2.01e-24 103
MsG0380012363.01.T01 MTR_5g035530 34.855 241 121 8 54 259 457 696 2.14e-24 103
MsG0380012363.01.T01 MTR_6g016430 33.692 279 142 9 50 288 574 849 2.50e-24 103
MsG0380012363.01.T01 MTR_3g023320 32.069 290 158 9 44 296 552 839 2.91e-24 103
MsG0380012363.01.T01 MTR_4g126000 34.646 254 144 9 50 287 450 697 3.03e-24 103
MsG0380012363.01.T01 MTR_0133s0020 35.294 255 146 11 53 296 599 845 4.67e-24 102
MsG0380012363.01.T01 MTR_5g071310 35.769 260 149 8 50 295 553 808 5.03e-24 102
MsG0380012363.01.T01 MTR_0511s0020 33.061 245 151 7 62 295 580 822 7.80e-24 102
MsG0380012363.01.T01 MTR_5g037460 32.857 280 140 8 55 287 440 718 8.80e-24 101
MsG0380012363.01.T01 MTR_5g070960 35.227 264 149 9 50 295 588 847 9.38e-24 101
MsG0380012363.01.T01 MTR_3g026660 33.459 266 135 10 57 282 619 882 5.14e-23 99.8
MsG0380012363.01.T01 MTR_5g071570 36.287 237 134 8 50 272 587 820 5.16e-23 99.8
MsG0380012363.01.T01 MTR_3g026660 33.459 266 135 10 57 282 562 825 5.96e-23 99.4
MsG0380012363.01.T01 MTR_4g055630 34.601 263 152 8 50 295 589 848 6.34e-23 99.4
MsG0380012363.01.T01 MTR_5g034770 33.750 240 114 8 55 256 557 789 1.55e-22 98.2
MsG0380012363.01.T01 MTR_5g040770 32.308 260 138 9 55 279 342 598 2.83e-22 97.4
MsG0380012363.01.T01 MTR_5g072250 33.333 249 131 8 54 279 588 824 2.93e-22 97.4
MsG0380012363.01.T01 MTR_5g035280 33.193 238 123 8 57 259 575 811 3.86e-22 97.1
MsG0380012363.01.T01 MTR_5g071220 36.328 256 142 9 58 295 594 846 4.63e-22 96.7
MsG0380012363.01.T01 MTR_5g071220 36.328 256 142 9 58 295 594 846 4.66e-22 96.7
MsG0380012363.01.T01 MTR_6g016420 34.559 272 137 9 50 283 552 820 5.92e-22 96.3
MsG0380012363.01.T01 MTR_6g016420 34.559 272 137 9 50 283 552 820 7.93e-22 95.9
MsG0380012363.01.T01 MTR_5g039570 36.041 197 111 7 79 264 388 580 1.03e-21 95.5
MsG0380012363.01.T01 MTR_5g037450 32.593 270 141 10 45 279 574 837 1.55e-21 95.1
MsG0380012363.01.T01 MTR_7g071940 33.840 263 154 8 50 295 578 837 2.44e-21 94.7
MsG0380012363.01.T01 MTR_5g071470 35.769 260 149 8 50 295 586 841 2.52e-21 94.7
MsG0380012363.01.T01 MTR_0256s0050 32.946 258 153 10 55 296 553 806 3.63e-21 94.0
MsG0380012363.01.T01 MTR_5g028340 31.522 276 143 12 50 284 557 827 8.67e-21 92.8
MsG0380012363.01.T01 MTR_2g014720 29.630 243 118 7 50 283 509 707 6.86e-20 90.5
MsG0380012363.01.T01 MTR_5g028290 31.655 278 140 13 50 282 584 856 1.23e-19 89.7
MsG0380012363.01.T01 MTR_5g035240 32.906 234 121 8 57 255 573 805 6.61e-19 87.4
MsG0380012363.01.T01 MTR_5g028420 30.104 289 145 12 50 284 551 836 2.50e-18 85.9
MsG0380012363.01.T01 MTR_5g037500 30.233 258 143 8 55 277 511 766 2.79e-18 85.5
MsG0380012363.01.T01 MTR_5g035480 31.636 275 141 10 55 295 561 822 4.96e-18 84.7
MsG0380012363.01.T01 MTR_3g015280 31.197 234 119 12 49 243 564 794 8.65e-18 84.0
MsG0380012363.01.T01 MTR_5g028610 29.181 281 149 11 50 284 554 830 1.65e-17 83.2
MsG0380012363.01.T01 MTR_5g028070 28.173 323 164 12 17 284 675 984 2.05e-17 83.2
MsG0380012363.01.T01 MTR_5g071823 32.794 247 150 8 62 295 600 843 2.17e-17 82.8
MsG0380012363.01.T01 MTR_5g071850 32.794 247 150 8 62 295 600 843 2.17e-17 82.8
MsG0380012363.01.T01 MTR_5g040900 30.472 233 134 7 68 281 542 765 2.92e-17 82.4
MsG0380012363.01.T01 MTR_6g046570 30.579 242 146 8 62 295 600 827 3.88e-17 82.0
MsG0380012363.01.T01 MTR_5g070470 34.221 263 153 8 50 295 587 846 8.48e-17 81.3
MsG0380012363.01.T01 MTR_5g028750 29.964 277 146 10 54 284 545 819 2.49e-16 79.7
MsG0380012363.01.T01 MTR_3g015500 29.741 232 122 10 49 246 602 826 6.23e-16 78.6
MsG0380012363.01.T01 MTR_6g046450 33.645 214 113 9 53 255 641 836 7.90e-16 78.2
MsG0380012363.01.T01 MTR_5g035200 36.875 160 94 6 125 279 12 169 1.59e-15 76.3
MsG0380012363.01.T01 MTR_3g015550 28.137 263 126 11 49 251 601 860 2.75e-15 76.6
MsG0380012363.01.T01 MTR_3g015550 28.137 263 126 11 49 251 564 823 2.92e-15 76.6
MsG0380012363.01.T01 MTR_4g050790 28.862 246 122 11 49 244 564 806 1.48e-14 74.3
MsG0380012363.01.T01 MTR_2g011040 59.259 54 19 1 127 177 132 185 2.27e-13 67.8
MsG0380012363.01.T01 MTR_3g015560 30.317 221 115 11 59 247 602 815 3.31e-13 70.5
MsG0380012363.01.T01 MTR_3g022810 56.604 53 23 0 235 287 104 156 3.45e-13 69.3
MsG0380012363.01.T01 MTR_4g022950 32.620 187 102 9 56 221 9 192 4.13e-13 69.7
MsG0380012363.01.T01 MTR_4g022560 33.140 172 99 7 77 236 634 801 5.43e-13 69.7
MsG0380012363.01.T01 MTR_4g022540 34.161 161 89 8 77 224 629 785 1.16e-12 68.6
MsG0380012363.01.T01 MTR_4g022460 33.028 218 89 11 62 233 590 796 4.17e-12 67.0
MsG0380012363.01.T01 MTR_4g022960 33.158 190 102 9 56 230 559 738 7.95e-12 66.2
MsG0380012363.01.T01 MTR_4g021690 29.864 221 132 10 77 283 634 845 1.01e-11 65.9
MsG0380012363.01.T01 MTR_3g022140 54.688 64 18 2 176 238 2 55 1.44e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012363.01.T01 AT3G14470 34.884 301 160 8 32 296 583 883 1.97e-40 150
MsG0380012363.01.T01 AT3G14470 34.884 301 160 8 32 296 583 883 1.97e-40 150
MsG0380012363.01.T01 AT3G14460 35.017 297 144 8 48 296 578 873 1.44e-35 136

Find 54 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAACCCCTTAGCCAATT+TGG 0.168863 3:+15468373 None:intergenic
CATGGAACAATTCATATTAA+AGG 0.169808 3:-15468583 MsG0380012363.01.T01:CDS
CTTTGAGATCAGATTCATTA+TGG 0.214885 3:+15468629 None:intergenic
AAAGAAAATGCCAAAGAATA+TGG 0.248008 3:-15468698 MsG0380012363.01.T01:CDS
AGCTTCTTCAAGTTGCTATT+TGG 0.269079 3:+15468427 None:intergenic
TTTAGCTTTCCCATATTCTT+TGG 0.278317 3:+15468688 None:intergenic
ATGACGTAAATTGATGAGTT+TGG 0.300845 3:+15468738 None:intergenic
TTTGAGATCAGATTCATTAT+GGG 0.335236 3:+15468630 None:intergenic
AAGGTAGTAGATTTCCAAAT+TGG 0.336382 3:-15468387 MsG0380012363.01.T01:CDS
AACAATTCATATTAAAGGCT+TGG 0.376045 3:-15468578 MsG0380012363.01.T01:CDS
TCTCAAATTTCAAAACTTCA+AGG 0.382333 3:+15468182 None:intergenic
AATTTGAGAGAATGAACAAT+TGG 0.386086 3:-15468168 MsG0380012363.01.T01:CDS
ACAATTCATATTAAAGGCTT+GGG 0.396664 3:-15468577 MsG0380012363.01.T01:CDS
ACCAGCCACGTCTTCACGTC+TGG 0.397181 3:+15470447 None:intergenic
GCAAAACTCAACCATCTTCA+TGG 0.404001 3:-15468601 MsG0380012363.01.T01:CDS
GTTGAAAATACTGTAGTAGA+AGG 0.429787 3:+15470332 None:intergenic
CTCAAATTTCAAAACTTCAA+GGG 0.440003 3:+15468183 None:intergenic
GCTGCTCAAGTGGTTGCAAA+TGG 0.442323 3:+15468305 None:intergenic
AAGAAAATGCCAAAGAATAT+GGG 0.444392 3:-15468697 MsG0380012363.01.T01:CDS
GAATGAACAATTGGGAGGAA+TGG 0.460938 3:-15468159 MsG0380012363.01.T01:CDS
ATTTGAGAGAATGAACAATT+GGG 0.465363 3:-15468167 MsG0380012363.01.T01:CDS
TATAGTAAGCTCTTAAGTAA+AGG 0.478829 3:+15468118 None:intergenic
TGTAACGGAATAAAGATCAT+TGG 0.480334 3:-15468250 MsG0380012363.01.T01:CDS
TATGAATTGTTCCATGAAGA+TGG 0.481840 3:+15468590 None:intergenic
CAATGGCGGAAGAGAAGAAA+TGG 0.484308 3:-15468485 MsG0380012363.01.T01:CDS
GTAGATTTCCAAATTGGCTA+AGG 0.485898 3:-15468381 MsG0380012363.01.T01:CDS
GTTGCATCTCATCTAATAGT+TGG 0.494132 3:+15470395 None:intergenic
AAGCAATGTGTTAGTCTTGG+AGG 0.500437 3:-15468458 MsG0380012363.01.T01:CDS
CTGCTCAAGTGGTTGCAAAT+GGG 0.519237 3:+15468306 None:intergenic
TAGATTTCCAAATTGGCTAA+GGG 0.520299 3:-15468380 MsG0380012363.01.T01:CDS
TGTAGTAGAAGGTTGAGATT+CGG 0.520966 3:+15470343 None:intergenic
AGTTCAAGAGATACTAAGTT+GGG 0.521343 3:+15468346 None:intergenic
TGAATCTGATCTCAAAGAGT+TGG 0.530324 3:-15468623 MsG0380012363.01.T01:CDS
ATTTCTATTTCAAACTGTAA+CGG 0.531015 3:-15468265 MsG0380012363.01.T01:CDS
TATATCTTTCAAATTTATTG+TGG 0.544415 3:+15468528 None:intergenic
CAGTTCAAGAGATACTAAGT+TGG 0.554789 3:+15468345 None:intergenic
ATAGAAATCTCCTTGAGAGA+GGG 0.557376 3:+15468280 None:intergenic
TGAAAGCAATGTGTTAGTCT+TGG 0.558814 3:-15468461 MsG0380012363.01.T01:CDS
TATCTAGACCTTTCTTACAC+TGG 0.559619 3:-15468858 MsG0380012363.01.T01:intron
AGAGAGGGGAGCTGCTCAAG+TGG 0.583696 3:+15468295 None:intergenic
TAGAAATCTCCTTGAGAGAG+GGG 0.584909 3:+15468281 None:intergenic
GAATTACATACAGAGTTCAA+TGG 0.586630 3:-15468502 MsG0380012363.01.T01:CDS
AGATTTCCAAATTGGCTAAG+GGG 0.586898 3:-15468379 MsG0380012363.01.T01:CDS
ATGTTAAAATTTAGACATTG+CGG 0.597139 3:-15468927 MsG0380012363.01.T01:intron
TGAGCAGCTCCCCTCTCTCA+AGG 0.597373 3:-15468290 MsG0380012363.01.T01:CDS
TGAGAGAATGAACAATTGGG+AGG 0.602375 3:-15468164 MsG0380012363.01.T01:CDS
TGTTAAACATGCTATGTATG+AGG 0.605946 3:-15470422 MsG0380012363.01.T01:CDS
AATAGAAATCTCCTTGAGAG+AGG 0.606523 3:+15468279 None:intergenic
TGAATCCAGACGTGAAGACG+TGG 0.612664 3:-15470452 MsG0380012363.01.T01:CDS
CTCAACATCACACACTACAA+AGG 0.634289 3:-15468406 MsG0380012363.01.T01:CDS
TCCAGACGTGAAGACGTGGC+TGG 0.645891 3:-15470448 MsG0380012363.01.T01:CDS
TCTCTTGAACTGCAAGACTG+TGG 0.669772 3:-15468334 MsG0380012363.01.T01:CDS
TTCCACAATAAAATATGACA+AGG 0.675839 3:+15468654 None:intergenic
TTACATACAGAGTTCAATGG+CGG 0.712039 3:-15468499 MsG0380012363.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATCTTTCAAATTTATTG+TGG + Chr3:15470064-15470083 None:intergenic 15.0%
!! TTGTTGTAAATCAATTAATT+TGG + Chr3:15468913-15468932 None:intergenic 15.0%
!!! ATTAATTGATTTACAACAAT+TGG - Chr3:15468914-15468933 MsG0380012363.01.T01:CDS 15.0%
!! ATGTTAAAATTTAGACATTG+CGG - Chr3:15469662-15469681 MsG0380012363.01.T01:intron 20.0%
!! ATTTCTATTTCAAACTGTAA+CGG - Chr3:15470324-15470343 MsG0380012363.01.T01:intron 20.0%
!!! TTGTAAATCAATTAATTTGG+TGG + Chr3:15468910-15468929 None:intergenic 20.0%
! AAAGAAAATGCCAAAGAATA+TGG - Chr3:15469891-15469910 MsG0380012363.01.T01:intron 25.0%
! AACAATTCATATTAAAGGCT+TGG - Chr3:15470011-15470030 MsG0380012363.01.T01:intron 25.0%
! AAGAAAATGCCAAAGAATAT+GGG - Chr3:15469892-15469911 MsG0380012363.01.T01:intron 25.0%
! AATTTGAGAGAATGAACAAT+TGG - Chr3:15470421-15470440 MsG0380012363.01.T01:CDS 25.0%
! ACAATTCATATTAAAGGCTT+GGG - Chr3:15470012-15470031 MsG0380012363.01.T01:intron 25.0%
! AGAACTACACAAATATTAAC+AGG - Chr3:15468742-15468761 MsG0380012363.01.T01:CDS 25.0%
! ATATCCAATCTTGAATCAAT+TGG - Chr3:15468998-15469017 MsG0380012363.01.T01:intron 25.0%
! ATGAGTTTGGAAAAATTTGA+AGG + Chr3:15469841-15469860 None:intergenic 25.0%
! ATTAATTCACCCTTGTTAAA+CGG + Chr3:15469253-15469272 None:intergenic 25.0%
! ATTTGAGAGAATGAACAATT+GGG - Chr3:15470422-15470441 MsG0380012363.01.T01:CDS 25.0%
! CATGGAACAATTCATATTAA+AGG - Chr3:15470006-15470025 MsG0380012363.01.T01:intron 25.0%
! CCAATAACATCAAAATGTTT+GGG + Chr3:15468654-15468673 None:intergenic 25.0%
! CTCAAATTTCAAAACTTCAA+GGG + Chr3:15470409-15470428 None:intergenic 25.0%
! GCAAATATACAACATACAAA+TGG + Chr3:15469777-15469796 None:intergenic 25.0%
! TATAGTAAGCTCTTAAGTAA+AGG + Chr3:15470474-15470493 None:intergenic 25.0%
! TCCAATAACATCAAAATGTT+TGG + Chr3:15468655-15468674 None:intergenic 25.0%
! TCTCAAATTTCAAAACTTCA+AGG + Chr3:15470410-15470429 None:intergenic 25.0%
! TGAGTTTGGAAAAATTTGAA+GGG + Chr3:15469840-15469859 None:intergenic 25.0%
! TTCCACAATAAAATATGACA+AGG + Chr3:15469938-15469957 None:intergenic 25.0%
! TTTACTAATCCATTGAATCT+AGG - Chr3:15468292-15468311 MsG0380012363.01.T01:CDS 25.0%
!! GAATTTTGTATGCAAATAGA+GGG - Chr3:15469447-15469466 MsG0380012363.01.T01:intron 25.0%
!! TGAATTTTGTATGCAAATAG+AGG - Chr3:15469446-15469465 MsG0380012363.01.T01:intron 25.0%
!! TTCTAGAAGATCATGATTAA+TGG + Chr3:15468836-15468855 None:intergenic 25.0%
!! TTGGCATTTTCTTTATACAA+GGG + Chr3:15469885-15469904 None:intergenic 25.0%
!! TTTGAGATCAGATTCATTAT+GGG + Chr3:15469962-15469981 None:intergenic 25.0%
!! TTTGGCATTTTCTTTATACA+AGG + Chr3:15469886-15469905 None:intergenic 25.0%
!! TTTTAATACCAGTGTAAGAA+AGG + Chr3:15469742-15469761 None:intergenic 25.0%
!!! AAAAATTCTGTCAAGTTGAA+TGG - Chr3:15469086-15469105 MsG0380012363.01.T01:intron 25.0%
!!! AGTTGAATGGATTAAGATAT+TGG - Chr3:15469099-15469118 MsG0380012363.01.T01:intron 25.0%
AAAGGTTATCCGTTTAACAA+GGG - Chr3:15469241-15469260 MsG0380012363.01.T01:intron 30.0%
AAGGTAGTAGATTTCCAAAT+TGG - Chr3:15470202-15470221 MsG0380012363.01.T01:intron 30.0%
AATATTTGTGTAGTTCTCGT+TGG + Chr3:15468739-15468758 None:intergenic 30.0%
AGATAAAAGTGAAGAAGAGT+TGG - Chr3:15469313-15469332 MsG0380012363.01.T01:intron 30.0%
AGTTCAAGAGATACTAAGTT+GGG + Chr3:15470246-15470265 None:intergenic 30.0%
ATATGGTAGAGATGGTTATA+AGG - Chr3:15468467-15468486 MsG0380012363.01.T01:CDS 30.0%
ATGACGTAAATTGATGAGTT+TGG + Chr3:15469854-15469873 None:intergenic 30.0%
ATTCCAAAAGATGTAGTTTG+TGG + Chr3:15468436-15468455 None:intergenic 30.0%
GAATTACATACAGAGTTCAA+TGG - Chr3:15470087-15470106 MsG0380012363.01.T01:intron 30.0%
GATAAGCTGGAATTGAAAAA+AGG - Chr3:15468360-15468379 MsG0380012363.01.T01:CDS 30.0%
GATCATTGAATAAGATTGGT+GGG + Chr3:15469378-15469397 None:intergenic 30.0%
GGAAATTTGTCAGAATGATT+TGG + Chr3:15468682-15468701 None:intergenic 30.0%
GTTGAAAATACTGTAGTAGA+AGG + Chr3:15468260-15468279 None:intergenic 30.0%
TACAACATACAAATGGTATC+AGG + Chr3:15469770-15469789 None:intergenic 30.0%
TAGATTTCCAAATTGGCTAA+GGG - Chr3:15470209-15470228 MsG0380012363.01.T01:intron 30.0%
TATGAATTGTTCCATGAAGA+TGG + Chr3:15470002-15470021 None:intergenic 30.0%
TATTGTTCGATATTTCCCAA+AGG - Chr3:15469223-15469242 MsG0380012363.01.T01:intron 30.0%
TGACGATCATTGAATAAGAT+TGG + Chr3:15469382-15469401 None:intergenic 30.0%
TGGAATGAATCTCACATATA+TGG - Chr3:15468450-15468469 MsG0380012363.01.T01:CDS 30.0%
TGTTAAACATGCTATGTATG+AGG - Chr3:15468167-15468186 MsG0380012363.01.T01:CDS 30.0%
TTCTTTGATCCTAGATTCAA+TGG + Chr3:15468304-15468323 None:intergenic 30.0%
TTGTTAAACGGATAACCTTT+GGG + Chr3:15469241-15469260 None:intergenic 30.0%
TTTCAGGACTTAAATTTCTG+TGG - Chr3:15469639-15469658 MsG0380012363.01.T01:intron 30.0%
! CAAGAAATATCTACTTGTTG+TGG - Chr3:15468765-15468784 MsG0380012363.01.T01:intron 30.0%
! GACCTTGTCATATTTTATTG+TGG - Chr3:15469933-15469952 MsG0380012363.01.T01:intron 30.0%
! TGTAACGGAATAAAGATCAT+TGG - Chr3:15470339-15470358 MsG0380012363.01.T01:intron 30.0%
!! CAATTAATTTGGTGGATTTC+AGG + Chr3:15468902-15468921 None:intergenic 30.0%
!! CCCAAACATTTTGATGTTAT+TGG - Chr3:15468651-15468670 MsG0380012363.01.T01:CDS 30.0%
!! CTTTGAGATCAGATTCATTA+TGG + Chr3:15469963-15469982 None:intergenic 30.0%
!! GTTCAACAAATGTTTTGTTC+AGG - Chr3:15470382-15470401 MsG0380012363.01.T01:CDS 30.0%
!! TGAATTAATCAAGTGTTGGA+TGG - Chr3:15469264-15469283 MsG0380012363.01.T01:intron 30.0%
!! TTCAATGGATTAGTAAAAGC+TGG + Chr3:15468289-15468308 None:intergenic 30.0%
!! TTTAGCTTTCCCATATTCTT+TGG + Chr3:15469904-15469923 None:intergenic 30.0%
AAAACAAGTTTCCGATTGGA+AGG + Chr3:15469200-15469219 None:intergenic 35.0%
AAACAAGTTTCCGATTGGAA+GGG + Chr3:15469199-15469218 None:intergenic 35.0%
AAGCAAAACAAGTTTCCGAT+TGG + Chr3:15469204-15469223 None:intergenic 35.0%
AATAGAAATCTCCTTGAGAG+AGG + Chr3:15470313-15470332 None:intergenic 35.0%
AGATATTGGAGACTGATATG+TGG - Chr3:15469113-15469132 MsG0380012363.01.T01:intron 35.0%
AGATTTCCAAATTGGCTAAG+GGG - Chr3:15470210-15470229 MsG0380012363.01.T01:intron 35.0%
AGGGTGAATTAATCAAGTGT+TGG - Chr3:15469260-15469279 MsG0380012363.01.T01:intron 35.0%
ATAGAAATCTCCTTGAGAGA+GGG + Chr3:15470312-15470331 None:intergenic 35.0%
ATATGTGGCATTTATCAGAC+GGG - Chr3:15469128-15469147 MsG0380012363.01.T01:intron 35.0%
ATTTAGCAAAATCAGTGTCG+AGG - Chr3:15469423-15469442 MsG0380012363.01.T01:intron 35.0%
CAAAGGTTATCCGTTTAACA+AGG - Chr3:15469240-15469259 MsG0380012363.01.T01:intron 35.0%
CAGTTCAAGAGATACTAAGT+TGG + Chr3:15470247-15470266 None:intergenic 35.0%
CGATCATTGAATAAGATTGG+TGG + Chr3:15469379-15469398 None:intergenic 35.0%
CTTGTTAAACGGATAACCTT+TGG + Chr3:15469242-15469261 None:intergenic 35.0%
GATATGTGGCATTTATCAGA+CGG - Chr3:15469127-15469146 MsG0380012363.01.T01:intron 35.0%
GTAGATTTCCAAATTGGCTA+AGG - Chr3:15470208-15470227 MsG0380012363.01.T01:intron 35.0%
GTTGCATCTCATCTAATAGT+TGG + Chr3:15468197-15468216 None:intergenic 35.0%
TATCTAGACCTTTCTTACAC+TGG - Chr3:15469731-15469750 MsG0380012363.01.T01:intron 35.0%
TCTCACATATATGGTAGAGA+TGG - Chr3:15468459-15468478 MsG0380012363.01.T01:CDS 35.0%
TGAATCTGATCTCAAAGAGT+TGG - Chr3:15469966-15469985 MsG0380012363.01.T01:intron 35.0%
TGCCTTTAGCAGTAAAACAT+GGG - Chr3:15469049-15469068 MsG0380012363.01.T01:intron 35.0%
TGTAGTAGAAGGTTGAGATT+CGG + Chr3:15468249-15468268 None:intergenic 35.0%
TTAAAAGGACACGTCACATT+TGG - Chr3:15469490-15469509 MsG0380012363.01.T01:intron 35.0%
TTACATACAGAGTTCAATGG+CGG - Chr3:15470090-15470109 MsG0380012363.01.T01:intron 35.0%
TTCAAAGCTCTCTTGTATCT+TGG + Chr3:15468609-15468628 None:intergenic 35.0%
TTGCAAACACTCTTGTTGAA+AGG - Chr3:15469793-15469812 MsG0380012363.01.T01:intron 35.0%
TTGCCTTTAGCAGTAAAACA+TGG - Chr3:15469048-15469067 MsG0380012363.01.T01:intron 35.0%
! AAATGTGACGTGTCCTTTTA+AGG + Chr3:15469491-15469510 None:intergenic 35.0%
! AGAATGTGAAAAAGTGTGGA+GGG - Chr3:15469025-15469044 MsG0380012363.01.T01:intron 35.0%
! GATCCACAAACTACATCTTT+TGG - Chr3:15468430-15468449 MsG0380012363.01.T01:CDS 35.0%
! GCTTTTCATGGCAAGAATTT+GGG - Chr3:15468972-15468991 MsG0380012363.01.T01:intron 35.0%
! TAGTTTGTGGATCTTTCTGA+AGG + Chr3:15468423-15468442 None:intergenic 35.0%
! TGAAAGCAATGTGTTAGTCT+TGG - Chr3:15470128-15470147 MsG0380012363.01.T01:intron 35.0%
! TGCTTTTCATGGCAAGAATT+TGG - Chr3:15468971-15468990 MsG0380012363.01.T01:intron 35.0%
! TTTGTGACACATGCTTTTCA+TGG - Chr3:15468960-15468979 MsG0380012363.01.T01:intron 35.0%
!! ACTTGTTGTGGATTGATGTT+TGG - Chr3:15468777-15468796 MsG0380012363.01.T01:intron 35.0%
!! AGAGCTTTGAACTTAAAGCT+TGG - Chr3:15468618-15468637 MsG0380012363.01.T01:CDS 35.0%
!! AGCTTCTTCAAGTTGCTATT+TGG + Chr3:15470165-15470184 None:intergenic 35.0%
!! GAGCTTTGAACTTAAAGCTT+GGG - Chr3:15468619-15468638 MsG0380012363.01.T01:CDS 35.0%
!! GCTCTAATCTCTCTTTTTCA+TGG + Chr3:15468227-15468246 None:intergenic 35.0%
!!! AGGAATGGTTTTGTCTTGAA+GGG - Chr3:15470445-15470464 MsG0380012363.01.T01:CDS 35.0%
ACCATAATCTCCCTTCCAAT+CGG - Chr3:15469186-15469205 MsG0380012363.01.T01:intron 40.0%
AGAGCCAATTTGTCAGCTTA+AGG - Chr3:15469548-15469567 MsG0380012363.01.T01:intron 40.0%
AGATTCTCTTGCTGATCAGA+AGG - Chr3:15468338-15468357 MsG0380012363.01.T01:CDS 40.0%
AGTCCCTTAAGCTGACAAAT+TGG + Chr3:15469555-15469574 None:intergenic 40.0%
ATCCAACAAACCAACTATGC+TGG + Chr3:15468549-15468568 None:intergenic 40.0%
CAGGAGAATGTGAAAAAGTG+TGG - Chr3:15469021-15469040 MsG0380012363.01.T01:intron 40.0%
CCAATCTTGAATCAATTGGC+AGG - Chr3:15469002-15469021 MsG0380012363.01.T01:intron 40.0%
CGTAGTCTGATACTACAATG+TGG - Chr3:15469576-15469595 MsG0380012363.01.T01:intron 40.0%
CTCAACATCACACACTACAA+AGG - Chr3:15470183-15470202 MsG0380012363.01.T01:intron 40.0%
GAATGAACAATTGGGAGGAA+TGG - Chr3:15470430-15470449 MsG0380012363.01.T01:CDS 40.0%
GAGCCAATTTGTCAGCTTAA+GGG - Chr3:15469549-15469568 MsG0380012363.01.T01:intron 40.0%
GATTGATGTTTGGCACAAGA+AGG - Chr3:15468787-15468806 MsG0380012363.01.T01:intron 40.0%
GCAAAACTCAACCATCTTCA+TGG - Chr3:15469988-15470007 MsG0380012363.01.T01:intron 40.0%
GCCTTTAGCAGTAAAACATG+GGG - Chr3:15469050-15469069 MsG0380012363.01.T01:intron 40.0%
GTATCAGTAACCAGCATAGT+TGG - Chr3:15468536-15468555 MsG0380012363.01.T01:CDS 40.0%
TAGAAATCTCCTTGAGAGAG+GGG + Chr3:15470311-15470330 None:intergenic 40.0%
TATGTGGCATTTATCAGACG+GGG - Chr3:15469129-15469148 MsG0380012363.01.T01:intron 40.0%
TCTGATACTACAATGTGGCA+GGG - Chr3:15469581-15469600 MsG0380012363.01.T01:intron 40.0%
TCTGATCAGCAAGAGAATCT+AGG + Chr3:15468338-15468357 None:intergenic 40.0%
TGAGAGAATGAACAATTGGG+AGG - Chr3:15470425-15470444 MsG0380012363.01.T01:CDS 40.0%
TGATAACCCCTTAGCCAATT+TGG + Chr3:15470219-15470238 None:intergenic 40.0%
TGGTAGAGATGGTTATAAGG+AGG - Chr3:15468470-15468489 MsG0380012363.01.T01:CDS 40.0%
! ACTATGCTGGTTACTGATAC+CGG + Chr3:15468536-15468555 None:intergenic 40.0%
! CCTGCCAATTGATTCAAGAT+TGG + Chr3:15469005-15469024 None:intergenic 40.0%
! GAGAATGTGAAAAAGTGTGG+AGG - Chr3:15469024-15469043 MsG0380012363.01.T01:intron 40.0%
! GTGCAACGTGATATGTTTTC+AGG - Chr3:15469623-15469642 MsG0380012363.01.T01:intron 40.0%
!! AACCAGCATAGTTGGTTTGT+TGG - Chr3:15468544-15468563 MsG0380012363.01.T01:CDS 40.0%
!! AAGCAATGTGTTAGTCTTGG+AGG - Chr3:15470131-15470150 MsG0380012363.01.T01:intron 40.0%
!! AGCATAGTTGGTTTGTTGGA+TGG - Chr3:15468548-15468567 MsG0380012363.01.T01:CDS 40.0%
!! CAAGGTTTGCTGAATTGTTG+CGG - Chr3:15469287-15469306 MsG0380012363.01.T01:intron 40.0%
!! GCATAGTTGGTTTGTTGGAT+GGG - Chr3:15468549-15468568 MsG0380012363.01.T01:CDS 40.0%
!! TAATCAAGTGTTGGATGGCA+AGG - Chr3:15469269-15469288 MsG0380012363.01.T01:intron 40.0%
!!! GAGGAATGGTTTTGTCTTGA+AGG - Chr3:15470444-15470463 MsG0380012363.01.T01:CDS 40.0%
AATTGGACGAAATCGACTGC+TGG - Chr3:15468931-15468950 MsG0380012363.01.T01:intron 45.0%
CTGCTCAAGTGGTTGCAAAT+GGG + Chr3:15470286-15470305 None:intergenic 45.0%
GTCTGATACTACAATGTGGC+AGG - Chr3:15469580-15469599 MsG0380012363.01.T01:intron 45.0%
TATGCAAATAGAGGGAGCCA+GGG - Chr3:15469455-15469474 MsG0380012363.01.T01:intron 45.0%
TCCGATTGGAAGGGAGATTA+TGG + Chr3:15469190-15469209 None:intergenic 45.0%
TCTCTTGAACTGCAAGACTG+TGG - Chr3:15470255-15470274 MsG0380012363.01.T01:intron 45.0%
TGATGTTTGGCACAAGAAGG+AGG - Chr3:15468790-15468809 MsG0380012363.01.T01:intron 45.0%
TGCTGATCAGAAGGATAAGC+TGG - Chr3:15468347-15468366 MsG0380012363.01.T01:CDS 45.0%
TGGCACAAGAAGGAGGAATT+GGG - Chr3:15468797-15468816 MsG0380012363.01.T01:intron 45.0%
TGTACACAAGAGAGCAAGAG+TGG + Chr3:15468580-15468599 None:intergenic 45.0%
TTGGCACAAGAAGGAGGAAT+TGG - Chr3:15468796-15468815 MsG0380012363.01.T01:intron 45.0%
! CAATGGCGGAAGAGAAGAAA+TGG - Chr3:15470104-15470123 MsG0380012363.01.T01:intron 45.0%
! GCCCCATGTTTTACTGCTAA+AGG + Chr3:15469054-15469073 None:intergenic 45.0%
! GGGTGGAAAGTAGCCTTAAA+AGG - Chr3:15469475-15469494 MsG0380012363.01.T01:intron 45.0%
! TTTAAGGCTACTTTCCACCC+TGG + Chr3:15469475-15469494 None:intergenic 45.0%
CCAGCAATCAGTGACGACTT+TGG - Chr3:15468706-15468725 MsG0380012363.01.T01:CDS 50.0%
GCAGACAATGACAGTGACAC+CGG - Chr3:15468514-15468533 MsG0380012363.01.T01:CDS 50.0%
GCTGCTCAAGTGGTTGCAAA+TGG + Chr3:15470287-15470306 None:intergenic 50.0%
GTATGCAAATAGAGGGAGCC+AGG - Chr3:15469454-15469473 MsG0380012363.01.T01:intron 50.0%
TGAATCCAGACGTGAAGACG+TGG - Chr3:15468137-15468156 MsG0380012363.01.T01:CDS 50.0%
! CCAAAGTCGTCACTGATTGC+TGG + Chr3:15468709-15468728 None:intergenic 50.0%
! TCGTCACTGATTGCTGGAGC+AGG + Chr3:15468703-15468722 None:intergenic 55.0%
ACCAGCCACGTCTTCACGTC+TGG + Chr3:15468145-15468164 None:intergenic 60.0%
AGAGAGGGGAGCTGCTCAAG+TGG + Chr3:15470297-15470316 None:intergenic 60.0%
GCAAATAGAGGGAGCCAGGG+TGG - Chr3:15469458-15469477 MsG0380012363.01.T01:intron 60.0%
TCCAGACGTGAAGACGTGGC+TGG - Chr3:15468141-15468160 MsG0380012363.01.T01:CDS 60.0%
TGAGCAGCTCCCCTCTCTCA+AGG - Chr3:15470299-15470318 MsG0380012363.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 15468117 15470494 15468117 ID=MsG0380012363.01;Name=MsG0380012363.01
Chr3 mRNA 15468117 15470494 15468117 ID=MsG0380012363.01.T01;Parent=MsG0380012363.01;Name=MsG0380012363.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|296
Chr3 exon 15470343 15470494 15470343 ID=MsG0380012363.01.T01:exon:918;Parent=MsG0380012363.01.T01
Chr3 exon 15468859 15468935 15468859 ID=MsG0380012363.01.T01:exon:917;Parent=MsG0380012363.01.T01
Chr3 exon 15468117 15468778 15468117 ID=MsG0380012363.01.T01:exon:916;Parent=MsG0380012363.01.T01
Chr3 CDS 15470343 15470494 15470343 ID=MsG0380012363.01.T01:cds;Parent=MsG0380012363.01.T01
Chr3 CDS 15468859 15468935 15468859 ID=MsG0380012363.01.T01:cds;Parent=MsG0380012363.01.T01
Chr3 CDS 15468117 15468778 15468117 ID=MsG0380012363.01.T01:cds;Parent=MsG0380012363.01.T01
Gene Sequence

>MsG0380012363.01.T01

ATGCAGAAAAGAGCAGTACGTGAATCCAGACGTGAAGACGTGGCTGGTGATGTTAAACATGCTATGTATGAGGCTGACCAACTATTAGATGAGATGCAACTGATGCACCATGAAAAAGAGAGATTAGAGCCGAATCTCAACCTTCTACTACAACATTGCGGTCTCTCAAAGCTAGTTGATGAGATAAGAAATTTAAAGCTTTTGCGTTATCTAGACCTTTCTTACACTGAGCTCCCTTCAAATTTTTCCAAACTCATCAATTTACGTCATCTTGAACTCCCTTGTATAAAGAAAATGCCAAAGAATATGGGAAAGCTAAATAATCTTCAGACCTTGTCATATTTTATTGTGGAAGCCCATAATGAATCTGATCTCAAAGAGTTGGCAAAACTCAACCATCTTCATGGAACAATTCATATTAAAGGCTTGGGTAATGTCAGTGATACATCAGATGCTGCCACAATAAATTTGAAAGATATAGAAGAATTACATACAGAGTTCAATGGCGGAAGAGAAGAAATGGATGAAAGCAATGTGTTAGTCTTGGAGGCTCTACAACCAAATAGCAACTTGAAGAAGCTCAACATCACACACTACAAAGGTAGTAGATTTCCAAATTGGCTAAGGGGTTATCATTTACCCAACTTAGTATCTCTTGAACTGCAAGACTGTGGATGTTCCCATTTGCAACCACTTGAGCAGCTCCCCTCTCTCAAGGAGATTTCTATTTCAAACTGTAACGGAATAAAGATCATTGGCGAAGAGTTTTACAACAATAGTTCAACAAATGTTTTGTTCAGGTCCCTTGAAGTTTTGAAATTTGAGAGAATGAACAATTGGGAGGAATGGTTTTGTCTTGAAGGGTTTCCTTTACTTAAGAGCTTACTATAA
Protein sequence

>MsG0380012363.01.T01

MQKRAVRESRREDVAGDVKHAMYEADQLLDEMQLMHHEKERLEPNLNLLLQHCGLSKLVDEIRNLKLLRYLDLSYTELPSNFSKLINLRHLELPCIKKMPKNMGKLNNLQTLSYFIVEAHNESDLKELAKLNHLHGTIHIKGLGNVSDTSDAATINLKDIEELHTEFNGGREEMDESNVLVLEALQPNSNLKKLNITHYKGSRFPNWLRGYHLPNLVSLELQDCGCSHLQPLEQLPSLKEISISNCNGIKIIGEEFYNNSSTNVLFRSLEVLKFERMNNWEEWFCLEGFPLLKSLL*