AlfalfaGEDB | MsG0380012552.01

M. sativa cultivar ZhongmuNo.1 / MsG0380012552.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380012552.01.T01	XP_013459118.1	86.555	238	15	2	1	232	26	252	6.98E-105	313
MsG0380012552.01.T01	XP_013459118.1	52.593	135	39	4	117	226	22	156	1.43E-11	73.6

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380012552.01.T01	Q9LXB8	61.135	229	67	5	1	225	30	240	1.24E-54	182

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380012552.01.T01	I3S1U4	86.555	238	15	2	1	232	26	252	3.33e-105	313

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180005590.01	MsG0380012552.01	0.842363	2.707422e-58	4.095665e-55
MsG0380012539.01	MsG0380012552.01	0.813717	2.222681e-51	1.462567e-48
MsG0380012540.01	MsG0380012552.01	0.871173	8.357822e-67	3.338639e-63
MsG0380012547.01	MsG0380012552.01	0.832391	9.712085e-56	1.084033e-52
MsG0380012552.01	MsG0380014734.01	0.815633	8.367070e-52	5.799959e-49
MsG0380012552.01	MsG0780040878.01	0.808394	3.164810e-50	1.807534e-47
MsG0280006485.01	MsG0380012552.01	0.800147	1.651523e-48	7.633350e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380012552.01.T01	MTR_3g026230	86.555	238	15	2	1	232	26	252	8.45e-109	313
MsG0380012552.01.T01	MTR_3g026230	52.593	135	39	4	117	226	22	156	1.73e-15	73.6
MsG0380012552.01.T01	MTR_3g026330	55.660	318	54	6	2	232	27	344	1.61e-72	224
MsG0380012552.01.T01	MTR_3g026290	53.293	334	53	7	2	232	27	360	5.35e-69	216
MsG0380012552.01.T01	MTR_3g026160	77.011	174	18	2	1	174	26	177	2.13e-62	193
MsG0380012552.01.T01	MTR_3g026160	64.151	159	37	6	83	232	37	184	2.18e-34	121
MsG0380012552.01.T01	MTR_3g026240	52.439	82	34	2	1	82	26	102	1.08e-15	71.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380012552.01.T01	AT5G09530	61.135	229	67	5	1	225	30	240	1.26e-55	182
MsG0380012552.01.T01	AT5G09530	56.274	263	65	8	10	225	100	359	9.71e-53	174
MsG0380012552.01.T01	AT5G09530	60.440	91	28	2	10	94	282	370	2.46e-15	74.7
MsG0380012552.01.T01	AT5G09520	59.459	111	35	3	3	113	30	130	2.35e-24	94.4
MsG0380012552.01.T01	AT5G09520	54.639	97	38	2	129	224	39	130	1.74e-15	70.9
MsG0380012552.01.T01	AT5G09520	53.684	95	37	2	85	179	41	128	4.97e-15	69.7
MsG0380012552.01.T01	AT5G09520	53.922	102	40	2	111	212	34	128	1.10e-14	68.9
MsG0380012552.01.T01	AT5G09520	57.955	88	34	2	146	232	34	119	1.50e-13	65.9
MsG0380012552.01.T01	AT5G09520	51.546	97	35	3	79	170	41	130	8.53e-12	61.2

Find 91 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAGGTACCTTTGGTATTTC+TGG	0.080700	3:+19621202	None:intergenic
TCGGGTATCTTTGGAATTTC+TGG	0.088558	3:+19621439	None:intergenic
AGCTCAGGTTTGGGCAATTC+AGG	0.197717	3:+19621487	None:intergenic
GGAACATCTTTAGGAGTTTC+AGG	0.202154	3:+19621097	None:intergenic
TCTGGTACCTTAGGCAATTC+TGG	0.225262	3:+19621646	None:intergenic
AATTCTGGCTTTGGCAATTC+TGG	0.227866	3:+19621628	None:intergenic
AATTCAGGGGCATTAAATTT+AGG	0.233034	3:+19621397	None:intergenic
TCAGGTACTTTAGGTAATTC+TGG	0.242157	3:+19621613	None:intergenic
AACTCTAGCTTTGGTAATTC+AGG	0.247874	3:+19621184	None:intergenic
ACCTTTGGTATTTCTGGTTT+GGG	0.248136	3:+19621208	None:intergenic
AGTTCAGGCTTTACCAATTC+AGG	0.261051	3:+19621151	None:intergenic
GACTTTAGGTAGCTCAGGTT+TGG	0.265600	3:+19621477	None:intergenic
TTTGGCAATTCGGGTATCTT+TGG	0.268546	3:+19621430	None:intergenic
TACCTTTGGTATTTCTGGTT+TGG	0.269930	3:+19621207	None:intergenic
TTTGGAAGTTCAGGTACTTT+AGG	0.279783	3:+19621604	None:intergenic
TTTGGCAATTCAGGGACTTT+AGG	0.301883	3:+19621358	None:intergenic
TTAGGTAATTCAGGAATCTT+AGG	0.302765	3:+19621670	None:intergenic
TACCTTAGGGATATCTGGTT+TGG	0.306919	3:+19621306	None:intergenic
ATAGACAATTCGGGGACTTT+AGG	0.311738	3:+19621463	None:intergenic
ACTTTAGGTGGCTCGAGTTT+TGG	0.314784	3:+19621373	None:intergenic
GTATTGGTTGGAACATCTTT+AGG	0.328990	3:+19621088	None:intergenic
TTAGGCAACTCGGGAACTTT+AGG	0.329308	3:+19621514	None:intergenic
TTCGGTAACTCGGGTACCTT+AGG	0.331068	3:+19621292	None:intergenic
TTCAGGTACCTTAGGTAGTT+CGG	0.333628	3:+19621267	None:intergenic
TCGGGTACCTTAGGGATATC+TGG	0.340073	3:+19621301	None:intergenic
AGCTCGGGCTTTGGAAGTTC+AGG	0.341805	3:+19621595	None:intergenic
TCAGGTACCTTAGGTAGTTC+GGG	0.349878	3:+19621268	None:intergenic
AAGTCGGACTTTGGCAATTC+GGG	0.351787	3:+19621421	None:intergenic
ATAGGTGGAAAATCAAGTTT+TGG	0.353325	3:+19621709	None:intergenic
ACTTTAGGTAGTTCATGTTT+TGG	0.353892	3:+19621340	None:intergenic
ACCTTAGGTAGTTCGGGTTT+CGG	0.357170	3:+19621274	None:intergenic
ACTTTGGGAAACTCGGGTTT+TGG	0.357337	3:+19621547	None:intergenic
TTAGGCAACTCAGGAACTTT+GGG	0.358876	3:+19621532	None:intergenic
TTGGGCAACTCAGAGACTTT+AGG	0.363342	3:+19621325	None:intergenic
ACTTTAGGTAGCTCAGGTTT+GGG	0.365399	3:+19621478	None:intergenic
AATTTCTGGCATAGACAATT+CGG	0.365865	3:+19621453	None:intergenic
ACATTAACTTTAGGTAGTTC+AGG	0.370017	3:+19621136	None:intergenic
GGAAGCTCAGGCTTTGGTAT+AGG	0.376080	3:+19621691	None:intergenic
AATTCTGGCTTAGGTAATTC+AGG	0.380278	3:+19621661	None:intergenic
TAAGTCGGACTTTGGCAATT+CGG	0.380730	3:+19621420	None:intergenic
TTGGGCAACTCAGAGACTTT+TGG	0.383888	3:+19621226	None:intergenic
CTCAGGAACTTTGGGAAACT+CGG	0.389158	3:+19621540	None:intergenic
ACTTTAGGTAATTCTGGCTT+TGG	0.389572	3:+19621619	None:intergenic
TTTAGGCAACTCAGGAACTT+TGG	0.393082	3:+19621531	None:intergenic
ATCTTAGGAAGCTCAGGCTT+TGG	0.394512	3:+19621685	None:intergenic
GGGTCAGGGACATTAACTTT+AGG	0.397411	3:+19621127	None:intergenic
ATTTCTGGCATAGACAATTC+GGG	0.397522	3:+19621454	None:intergenic
TTTGGTAATTCAGGTACCTT+TGG	0.399783	3:+19621193	None:intergenic
AACTTAGGTAGCTCGGGCTT+TGG	0.403695	3:+19621586	None:intergenic
TTTGGCAATTCTGGTACCTT+AGG	0.412348	3:+19621637	None:intergenic
ACCTTAGGGATATCTGGTTT+GGG	0.420537	3:+19621307	None:intergenic
TTTACCAATTCAGGTACCTT+AGG	0.428581	3:+19621160	None:intergenic
GTTACCTAAGGTACCTGAAT+TGG	0.434651	3:-19621164	MsG0380012552.01.T01:CDS
ACCTTAGGTAACTCTAGCTT+TGG	0.436884	3:+19621175	None:intergenic
AGTTCCAACTTAAGGAGTAT+TGG	0.438613	3:+19621072	None:intergenic
AGAGTATTACAATGGTTGTC+GGG	0.440611	3:-19621768	None:intergenic
TTTGGTAATTCAGGTACCTT+AGG	0.451961	3:+19621259	None:intergenic
TAGTTCGGGTTTCGGTAACT+CGG	0.452100	3:+19621282	None:intergenic
TCAGGAATCTTAGGAAGCTC+AGG	0.453881	3:+19621679	None:intergenic
GTTTCAGGGTAACTTGGGTC+AGG	0.457358	3:+19621112	None:intergenic
TTAGGAGTTTCAGGGTAACT+TGG	0.458417	3:+19621106	None:intergenic
AATTTAGGTAAGTCGGACTT+TGG	0.460942	3:+19621412	None:intergenic
AACATTAAACTTAGGTAGCT+CGG	0.462347	3:+19621579	None:intergenic
ACCTTAGGCAATTCTGGCTT+AGG	0.463421	3:+19621652	None:intergenic
TCGGGGACTTTAGGTAGCTC+AGG	0.467048	3:+19621472	None:intergenic
TTGGGCAATTCAGGGAACTT+AGG	0.475381	3:+19621496	None:intergenic
GGCAATTCAGGGACTTTAGG+TGG	0.484066	3:+19621361	None:intergenic
GGCATTAAATTTAGGTAAGT+CGG	0.487607	3:+19621405	None:intergenic
AATTCAGGAACATTAAACTT+AGG	0.490699	3:+19621571	None:intergenic
ACATTAAACTTAGGTAGCTC+GGG	0.491103	3:+19621580	None:intergenic
TTCAGGGAACTTAGGCAACT+CGG	0.499436	3:+19621504	None:intergenic
GAACATCTTTAGGAGTTTCA+GGG	0.499674	3:+19621098	None:intergenic
TCGGTAACTCGGGTACCTTA+GGG	0.515191	3:+19621293	None:intergenic
GCTCAGGTTTGGGCAATTCA+GGG	0.523757	3:+19621488	None:intergenic
CCAACTTAAGGAGTATTGGT+TGG	0.525013	3:+19621076	None:intergenic
AAGAGTATTACAATGGTTGT+CGG	0.526376	3:-19621769	None:intergenic
TCAGGAACTTTGGGAAACTC+GGG	0.528389	3:+19621541	None:intergenic
TAGGAGTTTCAGGGTAACTT+GGG	0.530415	3:+19621107	None:intergenic
AGCTCAGGCTTTGGTATAGG+TGG	0.530445	3:+19621694	None:intergenic
ACCGAAACCCGAACTACCTA+AGG	0.555888	3:-19621275	MsG0380012552.01.T01:CDS
TCGGGAACTTTAGGCAACTC+AGG	0.569614	3:+19621523	None:intergenic
TCAGGGAACTTAGGCAACTC+GGG	0.582113	3:+19621505	None:intergenic
ACCTAAGCCAGAATTGCCTA+AGG	0.603337	3:-19621653	MsG0380012552.01.T01:CDS
AGTTCGGGTTTCGGTAACTC+GGG	0.606735	3:+19621283	None:intergenic
TTTCTGGCATAGACAATTCG+GGG	0.611978	3:+19621455	None:intergenic
ACCAAAGCTAGAGTTACCTA+AGG	0.616598	3:-19621176	MsG0380012552.01.T01:CDS
TTTCAGGGTAACTTGGGTCA+GGG	0.623182	3:+19621113	None:intergenic
GAGTATTACAATGGTTGTCG+GGG	0.633099	3:-19621767	None:intergenic
GCCCAAACCAGATATCCCTA+AGG	0.649847	3:-19621308	MsG0380012552.01.T01:CDS
GCCCAAACCAGAAATACCAA+AGG	0.685777	3:-19621209	MsG0380012552.01.T01:CDS
TCTAGAGTCGAACATACCTG+AGG	0.701502	3:-19621734	MsG0380012552.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATTCAGGAACATTAAACTT+AGG	+	Chr3:19621270-19621289	None:intergenic	25.0%
	AACATTAAACTTAGGTAGCT+CGG	+	Chr3:19621262-19621281	None:intergenic	30.0%
	ACATTAACTTTAGGTAGTTC+AGG	+	Chr3:19621705-19621724	None:intergenic	30.0%
	GGCATTAAATTTAGGTAAGT+CGG	+	Chr3:19621436-19621455	None:intergenic	30.0%
	TTAGGTAATTCAGGAATCTT+AGG	+	Chr3:19621171-19621190	None:intergenic	30.0%
!	ACTTTAGGTAGTTCATGTTT+TGG	+	Chr3:19621501-19621520	None:intergenic	30.0%
!	ATAGGTGGAAAATCAAGTTT+TGG	+	Chr3:19621132-19621151	None:intergenic	30.0%
!!	AATTCAGGGGCATTAAATTT+AGG	+	Chr3:19621444-19621463	None:intergenic	30.0%
!!	AATTTCTGGCATAGACAATT+CGG	+	Chr3:19621388-19621407	None:intergenic	30.0%
	AATTTAGGTAAGTCGGACTT+TGG	+	Chr3:19621429-19621448	None:intergenic	35.0%
	ACATTAAACTTAGGTAGCTC+GGG	+	Chr3:19621261-19621280	None:intergenic	35.0%
	TCAGGTACTTTAGGTAATTC+TGG	+	Chr3:19621228-19621247	None:intergenic	35.0%
	TTTACCAATTCAGGTACCTT+AGG	+	Chr3:19621681-19621700	None:intergenic	35.0%
	TTTGGAAGTTCAGGTACTTT+AGG	+	Chr3:19621237-19621256	None:intergenic	35.0%
!	GAACATCTTTAGGAGTTTCA+GGG	+	Chr3:19621743-19621762	None:intergenic	35.0%
!	TTTGGTAATTCAGGTACCTT+AGG	+	Chr3:19621582-19621601	None:intergenic	35.0%
!	TTTGGTAATTCAGGTACCTT+TGG	+	Chr3:19621582-19621601	None:intergenic	35.0%
!!	AACTCTAGCTTTGGTAATTC+AGG	+	Chr3:19621657-19621676	None:intergenic	35.0%
!!	AATTCTGGCTTAGGTAATTC+AGG	+	Chr3:19621180-19621199	None:intergenic	35.0%
!!	ACCTTTGGTATTTCTGGTTT+GGG	+	Chr3:19621633-19621652	None:intergenic	35.0%
!!	ACTTTAGGTAATTCTGGCTT+TGG	+	Chr3:19621222-19621241	None:intergenic	35.0%
!!	ATTTCTGGCATAGACAATTC+GGG	+	Chr3:19621387-19621406	None:intergenic	35.0%
!!	GTATTGGTTGGAACATCTTT+AGG	+	Chr3:19621753-19621772	None:intergenic	35.0%
!!	TACCTTTGGTATTTCTGGTT+TGG	+	Chr3:19621634-19621653	None:intergenic	35.0%
!!!	AAATCAAGTTTTGGAACCTC+AGG	+	Chr3:19621123-19621142	None:intergenic	35.0%
!!!	AGTTCATGTTTTGGCAATTC+AGG	+	Chr3:19621492-19621511	None:intergenic	35.0%
!!!	GTTCATGTTTTGGCAATTCA+GGG	+	Chr3:19621491-19621510	None:intergenic	35.0%
	ACCAAAGCTAGAGTTACCTA+AGG	-	Chr3:19621662-19621681	MsG0380012552.01.T01:CDS	40.0%
	ACTTTAGGTAGCTCAGGTTT+GGG	+	Chr3:19621363-19621382	None:intergenic	40.0%
	AGTTCAGGCTTTACCAATTC+AGG	+	Chr3:19621690-19621709	None:intergenic	40.0%
	ATAGACAATTCGGGGACTTT+AGG	+	Chr3:19621378-19621397	None:intergenic	40.0%
	TAAGTCGGACTTTGGCAATT+CGG	+	Chr3:19621421-19621440	None:intergenic	40.0%
	TACCTTAGGGATATCTGGTT+TGG	+	Chr3:19621535-19621554	None:intergenic	40.0%
	TAGGAGTTTCAGGGTAACTT+GGG	+	Chr3:19621734-19621753	None:intergenic	40.0%
	TCAGGTACCTTTGGTATTTC+TGG	+	Chr3:19621639-19621658	None:intergenic	40.0%
	TTAGGAGTTTCAGGGTAACT+TGG	+	Chr3:19621735-19621754	None:intergenic	40.0%
	TTAGGCAACTCAGGAACTTT+GGG	+	Chr3:19621309-19621328	None:intergenic	40.0%
	TTCAGGTACCTTAGGTAGTT+CGG	+	Chr3:19621574-19621593	None:intergenic	40.0%
	TTTAGGCAACTCAGGAACTT+TGG	+	Chr3:19621310-19621329	None:intergenic	40.0%
	TTTGGCAATTCAGGGACTTT+AGG	+	Chr3:19621483-19621502	None:intergenic	40.0%
	TTTGGCAATTCGGGTATCTT+TGG	+	Chr3:19621411-19621430	None:intergenic	40.0%
	TTTGGCAATTCTGGTACCTT+AGG	+	Chr3:19621204-19621223	None:intergenic	40.0%
!	ACCTTAGGGATATCTGGTTT+GGG	+	Chr3:19621534-19621553	None:intergenic	40.0%
!	ACCTTAGGTAACTCTAGCTT+TGG	+	Chr3:19621666-19621685	None:intergenic	40.0%
!	GGAACATCTTTAGGAGTTTC+AGG	+	Chr3:19621744-19621763	None:intergenic	40.0%
!	GTTACCTAAGGTACCTGAAT+TGG	-	Chr3:19621674-19621693	MsG0380012552.01.T01:CDS	40.0%
!	TTTCTGGCATAGACAATTCG+GGG	+	Chr3:19621386-19621405	None:intergenic	40.0%
!!	AATTCTGGCTTTGGCAATTC+TGG	+	Chr3:19621213-19621232	None:intergenic	40.0%
!!	ACTTTTGGTAGCTCAGGTTT+TGG	+	Chr3:19621600-19621619	None:intergenic	40.0%
!!	AGCTCAGGTTTTGGTAATTC+AGG	+	Chr3:19621591-19621610	None:intergenic	40.0%
!!	TCGGGTATCTTTGGAATTTC+TGG	+	Chr3:19621402-19621421	None:intergenic	40.0%
	AAGTCGGACTTTGGCAATTC+GGG	+	Chr3:19621420-19621439	None:intergenic	45.0%
	ACCTAAGCCAGAATTGCCTA+AGG	-	Chr3:19621185-19621204	MsG0380012552.01.T01:CDS	45.0%
	ATCTTAGGAAGCTCAGGCTT+TGG	+	Chr3:19621156-19621175	None:intergenic	45.0%
	GACTTTAGGTAGCTCAGGTT+TGG	+	Chr3:19621364-19621383	None:intergenic	45.0%
	GCCCAAACCAGAAATACCAA+AGG	-	Chr3:19621629-19621648	MsG0380012552.01.T01:CDS	45.0%
	GGGTCAGGGACATTAACTTT+AGG	+	Chr3:19621714-19621733	None:intergenic	45.0%
	TCAGGAATCTTAGGAAGCTC+AGG	+	Chr3:19621162-19621181	None:intergenic	45.0%
	TCAGGTACCTTAGGTAGTTC+GGG	+	Chr3:19621573-19621592	None:intergenic	45.0%
	TCTGGTACCTTAGGCAATTC+TGG	+	Chr3:19621195-19621214	None:intergenic	45.0%
	TTAGGCAACTCGGGAACTTT+AGG	+	Chr3:19621327-19621346	None:intergenic	45.0%
	TTCAGGGAACTTAGGCAACT+CGG	+	Chr3:19621337-19621356	None:intergenic	45.0%
	TTGGGCAACTCAGAGACTTT+AGG	+	Chr3:19621516-19621535	None:intergenic	45.0%
	TTGGGCAATTCAGGGAACTT+AGG	+	Chr3:19621345-19621364	None:intergenic	45.0%
	TTTCAGGGTAACTTGGGTCA+GGG	+	Chr3:19621728-19621747	None:intergenic	45.0%
!	ACCTTAGGTAGTTCGGGTTT+CGG	+	Chr3:19621567-19621586	None:intergenic	45.0%
!	ACTTTAGGTGGCTCGAGTTT+TGG	+	Chr3:19621468-19621487	None:intergenic	45.0%
!	CTCAGGAACTTTGGGAAACT+CGG	+	Chr3:19621301-19621320	None:intergenic	45.0%
!	TAGTTCGGGTTTCGGTAACT+CGG	+	Chr3:19621559-19621578	None:intergenic	45.0%
!	TCAGGAACTTTGGGAAACTC+GGG	+	Chr3:19621300-19621319	None:intergenic	45.0%
!	TCTAGAGTCGAACATACCTG+AGG	-	Chr3:19621104-19621123	MsG0380012552.01.T01:CDS	45.0%
!	TTGGGCAACTCAGAGACTTT+TGG	+	Chr3:19621516-19621535	None:intergenic	45.0%
!!	AACTCGGGTTTTGGCAATTC+AGG	+	Chr3:19621285-19621304	None:intergenic	45.0%
!!	ACCTTAGGCAATTCTGGCTT+AGG	+	Chr3:19621189-19621208	None:intergenic	45.0%
!!	ACTTTGGGAAACTCGGGTTT+TGG	+	Chr3:19621294-19621313	None:intergenic	45.0%
!!	CTCGAGTTTTGGCAATTCAG+GGG	+	Chr3:19621457-19621476	None:intergenic	45.0%
!!	GCTCGAGTTTTGGCAATTCA+GGG	+	Chr3:19621458-19621477	None:intergenic	45.0%
!!	TCAGAGACTTTTGGTAGCTC+AGG	+	Chr3:19621606-19621625	None:intergenic	45.0%
	AACTTAGGTAGCTCGGGCTT+TGG	+	Chr3:19621255-19621274	None:intergenic	50.0%
	ACCGAAACCCGAACTACCTA+AGG	-	Chr3:19621563-19621582	MsG0380012552.01.T01:CDS	50.0%
	AGCTCAGGTTTGGGCAATTC+AGG	+	Chr3:19621354-19621373	None:intergenic	50.0%
	GCCCAAACCAGATATCCCTA+AGG	-	Chr3:19621530-19621549	MsG0380012552.01.T01:CDS	50.0%
	GCTCAGGTTTGGGCAATTCA+GGG	+	Chr3:19621353-19621372	None:intergenic	50.0%
	GGCAATTCAGGGACTTTAGG+TGG	+	Chr3:19621480-19621499	None:intergenic	50.0%
	GTTTCAGGGTAACTTGGGTC+AGG	+	Chr3:19621729-19621748	None:intergenic	50.0%
	TCAGGGAACTTAGGCAACTC+GGG	+	Chr3:19621336-19621355	None:intergenic	50.0%
	TCGGGAACTTTAGGCAACTC+AGG	+	Chr3:19621318-19621337	None:intergenic	50.0%
	TCGGGTACCTTAGGGATATC+TGG	+	Chr3:19621540-19621559	None:intergenic	50.0%
	TCGGTAACTCGGGTACCTTA+GGG	+	Chr3:19621548-19621567	None:intergenic	50.0%
	TTCGGTAACTCGGGTACCTT+AGG	+	Chr3:19621549-19621568	None:intergenic	50.0%
!	AGCTCAGGCTTTGGTATAGG+TGG	+	Chr3:19621147-19621166	None:intergenic	50.0%
!	AGTTCGGGTTTCGGTAACTC+GGG	+	Chr3:19621558-19621577	None:intergenic	50.0%
!	GGAAGCTCAGGCTTTGGTAT+AGG	+	Chr3:19621150-19621169	None:intergenic	50.0%
!!	GGCTCGAGTTTTGGCAATTC+AGG	+	Chr3:19621459-19621478	None:intergenic	50.0%
	TCGGGGACTTTAGGTAGCTC+AGG	+	Chr3:19621369-19621388	None:intergenic	55.0%
!!	AGCTCGGGCTTTGGAAGTTC+AGG	+	Chr3:19621246-19621265	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	19621081	19621779	19621081	ID=MsG0380012552.01;Name=MsG0380012552.01
Chr3	mRNA	19621081	19621779	19621081	ID=MsG0380012552.01.T01;Parent=MsG0380012552.01;Name=MsG0380012552.01.T01;_AED=0.45;_eAED=0.45;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|232
Chr3	exon	19621081	19621779	19621081	ID=MsG0380012552.01.T01:exon:7362;Parent=MsG0380012552.01.T01
Chr3	CDS	19621081	19621779	19621081	ID=MsG0380012552.01.T01:cds;Parent=MsG0380012552.01.T01

Gene Sequence

>MsG0380012552.01.T01

ATGGTTGTCGGGGCACGCAATCTTCTAGAGTCGAACATACCTGAGGTTCCAAAACTTGATTTTCCACCTATACCAAAGCCTGAGCTTCCTAAGATTCCTGAATTACCTAAGCCAGAATTGCCTAAGGTACCAGAATTGCCAAAGCCAGAATTACCTAAAGTACCTGAACTTCCAAAGCCCGAGCTACCTAAGTTTAATGTTCCTGAATTGCCAAAACCCGAGTTTCCCAAAGTTCCTGAGTTGCCTAAAGTTCCCGAGTTGCCTAAGTTCCCTGAATTGCCCAAACCTGAGCTACCTAAAGTCCCCGAATTGTCTATGCCAGAAATTCCAAAGATACCCGAATTGCCAAAGTCCGACTTACCTAAATTTAATGCCCCTGAATTGCCAAAACTCGAGCCACCTAAAGTCCCTGAATTGCCAAAACATGAACTACCTAAAGTCTCTGAGTTGCCCAAACCAGATATCCCTAAGGTACCCGAGTTACCGAAACCCGAACTACCTAAGGTACCTGAATTACCAAAACCTGAGCTACCAAAAGTCTCTGAGTTGCCCAAACCAGAAATACCAAAGGTACCTGAATTACCAAAGCTAGAGTTACCTAAGGTACCTGAATTGGTAAAGCCTGAACTACCTAAAGTTAATGTCCCTGACCCAAGTTACCCTGAAACTCCTAAAGATGTTCCAACCAATACTCCTTAA

Protein sequence

>MsG0380012552.01.T01

MVVGARNLLESNIPEVPKLDFPPIPKPELPKIPELPKPELPKVPELPKPELPKVPELPKPELPKFNVPELPKPEFPKVPELPKVPELPKFPELPKPELPKVPELSMPEIPKIPELPKSDLPKFNAPELPKLEPPKVPELPKHELPKVSELPKPDIPKVPELPKPELPKVPELPKPELPKVSELPKPEIPKVPELPKLELPKVPELVKPELPKVNVPDPSYPETPKDVPTNTP*