Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006485.01.T01 | XP_003593256.1 | 75.676 | 74 | 15 | 3 | 1 | 71 | 1 | 74 | 1.02E-13 | 72 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006485.01.T01 | G7IPN4 | 75.676 | 74 | 15 | 3 | 1 | 71 | 1 | 74 | 4.87e-14 | 72.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0280006485.01 | -0.806434 | 8.242531e-50 | 4.473295e-47 |
| MsG0080048633.01 | MsG0280006485.01 | 0.833060 | 6.622424e-56 | 7.541482e-53 |
| MsG0080048652.01 | MsG0280006485.01 | 0.843078 | 1.748238e-58 | 2.704007e-55 |
| MsG0080048889.01 | MsG0280006485.01 | 0.839928 | 1.181195e-57 | 1.656173e-54 |
| MsG0080049038.01 | MsG0280006485.01 | -0.805766 | 1.139437e-49 | 6.079501e-47 |
| MsG0080049066.01 | MsG0280006485.01 | -0.800963 | 1.125997e-48 | 5.313632e-46 |
| MsG0180000367.01 | MsG0280006485.01 | 0.814437 | 1.541413e-51 | 1.034278e-48 |
| MsG0180000399.01 | MsG0280006485.01 | 0.803253 | 3.808157e-49 | 1.904590e-46 |
| MsG0180001072.01 | MsG0280006485.01 | -0.806927 | 6.485762e-50 | 3.564758e-47 |
| MsG0180001079.01 | MsG0280006485.01 | 0.841618 | 4.261372e-58 | 6.296919e-55 |
| MsG0180001801.01 | MsG0280006485.01 | 0.874165 | 8.354394e-68 | 3.722413e-64 |
| MsG0180001802.01 | MsG0280006485.01 | 0.880740 | 4.278416e-70 | 2.440518e-66 |
| MsG0180001803.01 | MsG0280006485.01 | 0.842771 | 2.109314e-58 | 3.231400e-55 |
| MsG0180002808.01 | MsG0280006485.01 | 0.843623 | 1.250818e-58 | 1.968631e-55 |
| MsG0180002935.01 | MsG0280006485.01 | 0.819238 | 1.289688e-52 | 9.869472e-50 |
| MsG0180003375.01 | MsG0280006485.01 | 0.816526 | 5.284961e-52 | 3.753767e-49 |
| MsG0180003484.01 | MsG0280006485.01 | 0.800981 | 1.116739e-48 | 5.272326e-46 |
| MsG0180003955.01 | MsG0280006485.01 | 0.895418 | 9.764797e-76 | 1.012457e-71 |
| MsG0180005054.01 | MsG0280006485.01 | 0.812489 | 4.131456e-51 | 2.630522e-48 |
| MsG0180005328.01 | MsG0280006485.01 | 0.807569 | 4.740104e-50 | 2.649086e-47 |
| MsG0180005353.01 | MsG0280006485.01 | 0.808007 | 3.826707e-50 | 2.163302e-47 |
| MsG0180005369.01 | MsG0280006485.01 | -0.807937 | 3.960620e-50 | 2.234811e-47 |
| MsG0180005417.01 | MsG0280006485.01 | 0.816618 | 5.040902e-52 | 3.589472e-49 |
| MsG0180005757.01 | MsG0280006485.01 | 0.887591 | 1.247089e-72 | 9.331511e-69 |
| MsG0180005817.01 | MsG0280006485.01 | -0.811813 | 5.801148e-51 | 3.626734e-48 |
| MsG0280006381.01 | MsG0280006485.01 | -0.802650 | 5.072253e-49 | 2.498045e-46 |
| MsG0280006485.01 | MsG0280007426.01 | 0.814748 | 1.315411e-51 | 8.900225e-49 |
| MsG0280006485.01 | MsG0280007686.01 | 0.809930 | 1.483306e-50 | 8.823021e-48 |
| MsG0280006485.01 | MsG0280007759.01 | 0.812486 | 4.138362e-51 | 2.634697e-48 |
| MsG0280006485.01 | MsG0280007786.01 | 0.823949 | 1.051302e-53 | 9.184352e-51 |
| MsG0280006485.01 | MsG0280008328.01 | 0.803376 | 3.589807e-49 | 1.801057e-46 |
| MsG0280006485.01 | MsG0280008659.01 | 0.894843 | 1.682909e-75 | 1.702030e-71 |
| MsG0280006485.01 | MsG0280009416.01 | 0.844561 | 7.004176e-59 | 1.135265e-55 |
| MsG0280006485.01 | MsG0280009742.01 | -0.817399 | 3.365584e-52 | 2.448386e-49 |
| MsG0280006485.01 | MsG0280010296.01 | 0.852955 | 3.287003e-61 | 6.986866e-58 |
| MsG0280006485.01 | MsG0280010410.01 | 0.807824 | 4.184375e-50 | 2.354152e-47 |
| MsG0280006485.01 | MsG0280010463.01 | 0.829269 | 5.657205e-55 | 5.762218e-52 |
| MsG0280006485.01 | MsG0280011267.01 | 0.832237 | 1.060044e-55 | 1.177712e-52 |
| MsG0280006485.01 | MsG0280011299.01 | -0.800099 | 1.689729e-48 | 7.800267e-46 |
| MsG0280006485.01 | MsG0380011974.01 | 0.829013 | 6.526445e-55 | 6.596301e-52 |
| MsG0280006485.01 | MsG0380012552.01 | 0.800147 | 1.651523e-48 | 7.633350e-46 |
| MsG0280006485.01 | MsG0380013118.01 | 0.845509 | 3.884672e-59 | 6.488587e-56 |
| MsG0280006485.01 | MsG0380013272.01 | 0.837269 | 5.740961e-57 | 7.418087e-54 |
| MsG0280006485.01 | MsG0380013409.01 | 0.810945 | 8.957328e-51 | 5.473441e-48 |
| MsG0280006485.01 | MsG0380013415.01 | 0.803530 | 3.335792e-49 | 1.680374e-46 |
| MsG0280006485.01 | MsG0380014410.01 | 0.818739 | 1.675373e-52 | 1.264514e-49 |
| MsG0280006485.01 | MsG0380014642.01 | -0.804439 | 2.158867e-49 | 1.113125e-46 |
| MsG0280006485.01 | MsG0380014734.01 | 0.895843 | 6.518511e-76 | 6.874720e-72 |
| MsG0280006485.01 | MsG0380014735.01 | -0.823498 | 1.340748e-53 | 1.156442e-50 |
| MsG0280006485.01 | MsG0380016476.01 | 0.851888 | 6.615808e-61 | 1.358310e-57 |
| MsG0280006485.01 | MsG0380016935.01 | -0.809136 | 2.196836e-50 | 1.279516e-47 |
| MsG0280006485.01 | MsG0380016968.01 | 0.835123 | 2.015339e-56 | 2.441067e-53 |
| MsG0280006485.01 | MsG0380017102.01 | 0.803500 | 3.384394e-49 | 1.703494e-46 |
| MsG0280006485.01 | MsG0380017405.01 | -0.810676 | 1.023808e-50 | 6.210907e-48 |
| MsG0280006485.01 | MsG0380017582.01 | 0.831070 | 2.055527e-55 | 2.206407e-52 |
| MsG0280006485.01 | MsG0380017804.01 | -0.812625 | 3.857858e-51 | 2.465018e-48 |
| MsG0280006485.01 | MsG0480018440.01 | 0.841469 | 4.663169e-58 | 6.859081e-55 |
| MsG0280006485.01 | MsG0480019666.01 | 0.804653 | 1.948216e-49 | 1.010091e-46 |
| MsG0280006485.01 | MsG0480019980.01 | 0.815131 | 1.081805e-51 | 7.395638e-49 |
| MsG0280006485.01 | MsG0480020722.01 | 0.837513 | 4.971637e-57 | 6.473604e-54 |
| MsG0280006485.01 | MsG0480020814.01 | 0.838767 | 2.364442e-57 | 3.198889e-54 |
| MsG0280006485.01 | MsG0480020957.01 | 0.832922 | 7.170540e-56 | 8.130744e-53 |
| MsG0280006485.01 | MsG0480020958.01 | 0.808972 | 2.381741e-50 | 1.381031e-47 |
| MsG0280006485.01 | MsG0480020986.01 | 0.813311 | 2.729659e-51 | 1.776436e-48 |
| MsG0280006485.01 | MsG0480021604.01 | 0.806081 | 9.782174e-50 | 5.261377e-47 |
| MsG0280006485.01 | MsG0480021912.01 | -0.825923 | 3.597650e-54 | 3.324916e-51 |
| MsG0280006485.01 | MsG0480022428.01 | 0.841641 | 4.200216e-58 | 6.210762e-55 |
| MsG0280006485.01 | MsG0480022735.01 | 0.812352 | 4.427313e-51 | 2.808559e-48 |
| MsG0280006485.01 | MsG0480022833.01 | 0.803332 | 3.666596e-49 | 1.837508e-46 |
| MsG0280006485.01 | MsG0480023152.01 | -0.815260 | 1.012464e-51 | 6.946219e-49 |
| MsG0280006485.01 | MsG0480023195.01 | 0.839565 | 1.468238e-57 | 2.035431e-54 |
| MsG0280006485.01 | MsG0480023322.01 | 0.842142 | 3.096978e-58 | 4.652153e-55 |
| MsG0280006485.01 | MsG0580024493.01 | -0.812975 | 3.234892e-51 | 2.086070e-48 |
| MsG0280006485.01 | MsG0580025023.01 | 0.813945 | 1.979037e-51 | 1.310238e-48 |
| MsG0280006485.01 | MsG0580025117.01 | 0.846618 | 1.939724e-59 | 3.358131e-56 |
| MsG0280006485.01 | MsG0580025507.01 | 0.809842 | 1.549006e-50 | 9.192911e-48 |
| MsG0280006485.01 | MsG0580027036.01 | 0.906866 | 9.382541e-81 | 1.620639e-76 |
| MsG0280006485.01 | MsG0580027201.01 | 0.862399 | 5.208766e-64 | 1.523300e-60 |
| MsG0280006485.01 | MsG0580028023.01 | 0.886707 | 2.704583e-72 | 1.953206e-68 |
| MsG0280006485.01 | MsG0580028924.01 | 0.842068 | 3.240877e-58 | 4.856818e-55 |
| MsG0280006485.01 | MsG0580029177.01 | -0.809457 | 1.874865e-50 | 1.101319e-47 |
| MsG0280006485.01 | MsG0580029792.01 | -0.836474 | 9.162792e-57 | 1.155981e-53 |
| MsG0280006485.01 | MsG0580030067.01 | -0.809427 | 1.902609e-50 | 1.116772e-47 |
| MsG0280006485.01 | MsG0680030960.01 | 0.803355 | 3.627522e-49 | 1.818922e-46 |
| MsG0280006485.01 | MsG0680030961.01 | 0.825795 | 3.857388e-54 | 3.552128e-51 |
| MsG0280006485.01 | MsG0680031813.01 | -0.805621 | 1.222172e-49 | 6.496329e-47 |
| MsG0280006485.01 | MsG0680035584.01 | -0.802181 | 6.336179e-49 | 3.083479e-46 |
| MsG0280006485.01 | MsG0680035841.01 | 0.822379 | 2.444533e-53 | 2.042805e-50 |
| MsG0280006485.01 | MsG0680035870.01 | -0.810104 | 1.360696e-50 | 8.130778e-48 |
| MsG0280006485.01 | MsG0780037094.01 | 0.812204 | 4.769380e-51 | 3.013423e-48 |
| MsG0280006485.01 | MsG0780037751.01 | 0.852006 | 6.124300e-61 | 1.262070e-57 |
| MsG0280006485.01 | MsG0780038305.01 | 0.840363 | 9.095981e-58 | 1.292641e-54 |
| MsG0280006485.01 | MsG0780038307.01 | 0.812234 | 4.697687e-51 | 2.970616e-48 |
| MsG0280006485.01 | MsG0780038983.01 | 0.831152 | 1.962395e-55 | 2.111547e-52 |
| MsG0280006485.01 | MsG0780038985.01 | 0.843107 | 1.716592e-58 | 2.657672e-55 |
| MsG0280006485.01 | MsG0780039190.01 | 0.817782 | 2.757683e-52 | 2.027375e-49 |
| MsG0280006485.01 | MsG0780039431.01 | 0.824788 | 6.676089e-54 | 5.973840e-51 |
| MsG0280006485.01 | MsG0780039773.01 | 0.840401 | 8.893027e-58 | 1.265339e-54 |
| MsG0280006485.01 | MsG0780039916.01 | 0.811071 | 8.409490e-51 | 5.155422e-48 |
| MsG0280006485.01 | MsG0780039925.01 | 0.811672 | 6.228288e-51 | 3.878908e-48 |
| MsG0280006485.01 | MsG0780040034.01 | 0.815229 | 1.029020e-51 | 7.053637e-49 |
| MsG0280006485.01 | MsG0780040878.01 | 0.881670 | 1.978258e-70 | 1.169456e-66 |
| MsG0280006485.01 | MsG0780040977.01 | 0.849970 | 2.296869e-60 | 4.430797e-57 |
| MsG0280006485.01 | MsG0780041079.01 | 0.828228 | 1.010210e-54 | 9.979925e-52 |
| MsG0280006485.01 | MsG0780041180.01 | 0.840981 | 6.265806e-58 | 9.076447e-55 |
| MsG0280006485.01 | MsG0780041225.01 | 0.800115 | 1.676346e-48 | 7.741804e-46 |
| MsG0280006485.01 | MsG0780041531.01 | -0.821795 | 3.339765e-53 | 2.744619e-50 |
| MsG0280006485.01 | MsG0780041720.01 | -0.813203 | 2.882852e-51 | 1.870508e-48 |
| MsG0280006485.01 | MsG0780041783.01 | -0.817220 | 3.692147e-52 | 2.672760e-49 |
| MsG0280006485.01 | MsG0880041978.01 | 0.801347 | 9.397708e-49 | 4.477805e-46 |
| MsG0280006485.01 | MsG0880042122.01 | 0.839979 | 1.145925e-57 | 1.609395e-54 |
| MsG0280006485.01 | MsG0880042635.01 | 0.803637 | 3.169565e-49 | 1.600960e-46 |
| MsG0280006485.01 | MsG0880043261.01 | 0.835491 | 1.626930e-56 | 1.992685e-53 |
| MsG0280006485.01 | MsG0880043364.01 | 0.806941 | 6.442108e-50 | 3.542082e-47 |
| MsG0280006485.01 | MsG0880043961.01 | 0.833313 | 5.730412e-56 | 6.574907e-53 |
| MsG0280006485.01 | MsG0880043989.01 | 0.849487 | 3.133428e-60 | 5.949340e-57 |
| MsG0280006485.01 | MsG0880045369.01 | -0.805454 | 1.324472e-49 | 7.010192e-47 |
| MsG0280006485.01 | MsG0880045385.01 | -0.820170 | 7.902205e-53 | 6.206681e-50 |
| MsG0280006485.01 | MsG0880045790.01 | 0.881626 | 2.053470e-70 | 1.211863e-66 |
| MsG0280006485.01 | MsG0880045804.01 | 0.851085 | 1.116485e-60 | 2.233908e-57 |
| MsG0280006485.01 | MsG0880045808.01 | 0.813464 | 2.526690e-51 | 1.651293e-48 |
| MsG0280006485.01 | MsG0880045968.01 | -0.815760 | 7.838877e-52 | 5.452703e-49 |
| MsG0280006485.01 | MsG0880046174.01 | -0.828860 | 7.107506e-55 | 7.151134e-52 |
| MsG0280006485.01 | MsG0880046463.01 | 0.904119 | 1.712231e-79 | 2.610148e-75 |
| MsG0280006485.01 | MsG0880046469.01 | -0.802837 | 4.641792e-49 | 2.297155e-46 |
| MsG0280006485.01 | MsG0880046838.01 | -0.815013 | 1.148832e-51 | 7.829314e-49 |
| MsG0280006485.01 | MsG0880047493.01 | 0.829296 | 5.573211e-55 | 5.681484e-52 |
| MsG0280006485.01 | MsG0880047714.01 | 0.835914 | 1.271679e-56 | 1.577417e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006485.01.T01 | MTR_2g009450 | 75.676 | 74 | 15 | 3 | 1 | 71 | 1 | 74 | 1.24e-17 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 33 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAATGAAAATTGCTAAAA+TGG | 0.217571 | 2:+2617408 | None:intergenic |
| CACAAATGACAATGTATATA+TGG | 0.287137 | 2:+2617027 | None:intergenic |
| ATAGATGGCTGAGTAGGTTT+TGG | 0.351476 | 2:+2617218 | None:intergenic |
| TTTGGCAATGCTGGGATTGT+AGG | 0.373136 | 2:+2617236 | None:intergenic |
| CATAGTGATTGGGATTGTAT+AGG | 0.385126 | 2:+2617131 | None:intergenic |
| TGGGATTGTATAGGAATGTT+TGG | 0.392653 | 2:+2617140 | None:intergenic |
| GGGAATGTTGGCATAGTGAT+TGG | 0.393983 | 2:+2617120 | None:intergenic |
| AATTGCTAAAATGGAACTAT+AGG | 0.396458 | 2:+2617417 | None:intergenic |
| TGAGGCAATGTTGGAATTGT+TGG | 0.400561 | 2:+2617278 | None:intergenic |
| TTGAAGGTGGTGGAGAAAGA+AGG | 0.429584 | 2:+2617098 | None:intergenic |
| TATACATTGTCATTTGTGTT+GGG | 0.434569 | 2:-2617022 | MsG0280006485.01.T01:CDS |
| AACACTTGACACGAACTTCA+AGG | 0.443717 | 2:+2617066 | None:intergenic |
| TGAAGGTGGTGGAGAAAGAA+GGG | 0.449250 | 2:+2617099 | None:intergenic |
| GGGATAGTACTAGGAATAGA+TGG | 0.460146 | 2:+2617203 | None:intergenic |
| TGCTATTTCCTTCTCAAACA+TGG | 0.466175 | 2:-2617389 | MsG0280006485.01.T01:CDS |
| ATATACATTGTCATTTGTGT+TGG | 0.474128 | 2:-2617023 | MsG0280006485.01.T01:CDS |
| ACATTTCCTTGAGGCAATGT+TGG | 0.483996 | 2:+2617269 | None:intergenic |
| AAGAAGATTGCGAGCTGCTA+GGG | 0.488157 | 2:+2617360 | None:intergenic |
| TGGAGAAAGAAGGGGAATGT+TGG | 0.490440 | 2:+2617108 | None:intergenic |
| GGAATGTTGGCATAGTGATT+GGG | 0.491312 | 2:+2617121 | None:intergenic |
| TGCTAAAATGGAACTATAGG+AGG | 0.524832 | 2:+2617420 | None:intergenic |
| GAAGAAGATTGCGAGCTGCT+AGG | 0.531513 | 2:+2617359 | None:intergenic |
| TGTATAGGAATGTTTGGAAG+TGG | 0.534499 | 2:+2617146 | None:intergenic |
| CTAGGAATAGATGGCTGAGT+AGG | 0.540861 | 2:+2617212 | None:intergenic |
| GCTGGGATTGTAGGCAAAGG+TGG | 0.549782 | 2:+2617245 | None:intergenic |
| ATAGGAATGTTTGGAAGTGG+TGG | 0.557391 | 2:+2617149 | None:intergenic |
| AATGGAACTATAGGAGGCCA+TGG | 0.562785 | 2:+2617426 | None:intergenic |
| GGTAATGTCCATGTTTGAGA+AGG | 0.594515 | 2:+2617381 | None:intergenic |
| TTGACACGAACTTCAAGGAG+TGG | 0.601056 | 2:+2617071 | None:intergenic |
| GAAGGTGGTGGAGAAAGAAG+GGG | 0.618928 | 2:+2617100 | None:intergenic |
| ACAATTCCAACATTGCCTCA+AGG | 0.633830 | 2:-2617275 | MsG0280006485.01.T01:CDS |
| AAAGGTGGAACATTTCCTTG+AGG | 0.706888 | 2:+2617260 | None:intergenic |
| AATGCTGGGATTGTAGGCAA+AGG | 0.711188 | 2:+2617242 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATTGCTAAAATGGAACTAT+AGG | + | Chr2:2617029-2617048 | None:intergenic | 25.0% |
| ! | AGCAATGAAAATTGCTAAAA+TGG | + | Chr2:2617038-2617057 | None:intergenic | 25.0% |
| ! | CACAAATGACAATGTATATA+TGG | + | Chr2:2617419-2617438 | None:intergenic | 25.0% |
| !! | ATATACATTGTCATTTGTGT+TGG | - | Chr2:2617420-2617439 | MsG0280006485.01.T01:CDS | 25.0% |
| !! | TATACATTGTCATTTGTGTT+GGG | - | Chr2:2617421-2617440 | MsG0280006485.01.T01:CDS | 25.0% |
| AATGTTGGAATTGTTGGCAA+AGG | + | Chr2:2617162-2617181 | None:intergenic | 35.0% | |
| CATAGTGATTGGGATTGTAT+AGG | + | Chr2:2617315-2617334 | None:intergenic | 35.0% | |
| GTGGAATAGTTGGAATTGTA+GGG | + | Chr2:2617263-2617282 | None:intergenic | 35.0% | |
| TGCTAAAATGGAACTATAGG+AGG | + | Chr2:2617026-2617045 | None:intergenic | 35.0% | |
| TGGGATTGTATAGGAATGTT+TGG | + | Chr2:2617306-2617325 | None:intergenic | 35.0% | |
| TGTATAGGAATGTTTGGAAG+TGG | + | Chr2:2617300-2617319 | None:intergenic | 35.0% | |
| TGTGGAATAGTTGGAATTGT+AGG | + | Chr2:2617264-2617283 | None:intergenic | 35.0% | |
| ! | AGTTCGTGTCAAGTGTTTTA+TGG | - | Chr2:2617383-2617402 | MsG0280006485.01.T01:CDS | 35.0% |
| !! | TGCTATTTCCTTCTCAAACA+TGG | - | Chr2:2617054-2617073 | MsG0280006485.01.T01:CDS | 35.0% |
| !!! | AATGTTGGCAATGTTGGTTT+TGG | + | Chr2:2617135-2617154 | None:intergenic | 35.0% |
| !!! | AATGTTGGTTTTGGAAGTGT+TGG | + | Chr2:2617126-2617145 | None:intergenic | 35.0% |
| !!! | TTCAAGGAGTGGTTTTTTGA+AGG | + | Chr2:2617364-2617383 | None:intergenic | 35.0% |
| AAAGGTGGAACATTTCCTTG+AGG | + | Chr2:2617186-2617205 | None:intergenic | 40.0% | |
| AACACTTGACACGAACTTCA+AGG | + | Chr2:2617380-2617399 | None:intergenic | 40.0% | |
| ACAATTCCAACATTGCCTCA+AGG | - | Chr2:2617168-2617187 | MsG0280006485.01.T01:intron | 40.0% | |
| ACATTTCCTTGAGGCAATGT+TGG | + | Chr2:2617177-2617196 | None:intergenic | 40.0% | |
| AGAGTGAACTGTGGAATAGT+TGG | + | Chr2:2617273-2617292 | None:intergenic | 40.0% | |
| ATAGGAATGTTTGGAAGTGG+TGG | + | Chr2:2617297-2617316 | None:intergenic | 40.0% | |
| GGAATGTTGGCATAGTGATT+GGG | + | Chr2:2617325-2617344 | None:intergenic | 40.0% | |
| GGAATTGTAGGGATAGTACT+AGG | + | Chr2:2617252-2617271 | None:intergenic | 40.0% | |
| GGGATAGTACTAGGAATAGA+TGG | + | Chr2:2617243-2617262 | None:intergenic | 40.0% | |
| GGTAATGTCCATGTTTGAGA+AGG | + | Chr2:2617065-2617084 | None:intergenic | 40.0% | |
| TGAGGCAATGTTGGAATTGT+TGG | + | Chr2:2617168-2617187 | None:intergenic | 40.0% | |
| ! | ATAGATGGCTGAGTAGGTTT+TGG | + | Chr2:2617228-2617247 | None:intergenic | 40.0% |
| !! | TTTGGAAGTGTTGGTGTAGT+TGG | + | Chr2:2617117-2617136 | None:intergenic | 40.0% |
| !!! | AAGGAGTGGTTTTTTGAAGG+TGG | + | Chr2:2617361-2617380 | None:intergenic | 40.0% |
| AAGAAGATTGCGAGCTGCTA+GGG | + | Chr2:2617086-2617105 | None:intergenic | 45.0% | |
| AATGCTGGGATTGTAGGCAA+AGG | + | Chr2:2617204-2617223 | None:intergenic | 45.0% | |
| CTAGGAATAGATGGCTGAGT+AGG | + | Chr2:2617234-2617253 | None:intergenic | 45.0% | |
| GGGAATGTTGGCATAGTGAT+TGG | + | Chr2:2617326-2617345 | None:intergenic | 45.0% | |
| GTTGGAATTGTTGGCAAAGG+TGG | + | Chr2:2617159-2617178 | None:intergenic | 45.0% | |
| TGGAGAAAGAAGGGGAATGT+TGG | + | Chr2:2617338-2617357 | None:intergenic | 45.0% | |
| TTGACACGAACTTCAAGGAG+TGG | + | Chr2:2617375-2617394 | None:intergenic | 45.0% | |
| TTTGGCAATGCTGGGATTGT+AGG | + | Chr2:2617210-2617229 | None:intergenic | 45.0% | |
| !! | GAGTAGGTTTTGGCAATGCT+GGG | + | Chr2:2617218-2617237 | None:intergenic | 45.0% |
| !! | TGAAGGTGGTGGAGAAAGAA+GGG | + | Chr2:2617347-2617366 | None:intergenic | 45.0% |
| !! | TGAGTAGGTTTTGGCAATGC+TGG | + | Chr2:2617219-2617238 | None:intergenic | 45.0% |
| !! | TTGAAGGTGGTGGAGAAAGA+AGG | + | Chr2:2617348-2617367 | None:intergenic | 45.0% |
| !!! | GAGTGGTTTTTTGAAGGTGG+TGG | + | Chr2:2617358-2617377 | None:intergenic | 45.0% |
| GAAGAAGATTGCGAGCTGCT+AGG | + | Chr2:2617087-2617106 | None:intergenic | 50.0% | |
| GGTGGCAATGTTGGCAATGT+TGG | + | Chr2:2617141-2617160 | None:intergenic | 50.0% | |
| GTTGGCAAAGGTGGCAATGT+TGG | + | Chr2:2617150-2617169 | None:intergenic | 50.0% | |
| ! | AGTGGTGGAAGAGTGAACTG+TGG | + | Chr2:2617282-2617301 | None:intergenic | 50.0% |
| !! | GAAGGTGGTGGAGAAAGAAG+GGG | + | Chr2:2617346-2617365 | None:intergenic | 50.0% |
| GCTGGGATTGTAGGCAAAGG+TGG | + | Chr2:2617201-2617220 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 2617019 | 2617446 | 2617019 | ID=MsG0280006485.01;Name=MsG0280006485.01 |
| Chr2 | mRNA | 2617019 | 2617446 | 2617019 | ID=MsG0280006485.01.T01;Parent=MsG0280006485.01;Name=MsG0280006485.01.T01;_AED=0.29;_eAED=0.57;_QI=0|0|0|1|0|0|3|0|116 |
| Chr2 | exon | 2617019 | 2617182 | 2617019 | ID=MsG0280006485.01.T01:exon:520;Parent=MsG0280006485.01.T01 |
| Chr2 | exon | 2617213 | 2617300 | 2617213 | ID=MsG0280006485.01.T01:exon:519;Parent=MsG0280006485.01.T01 |
| Chr2 | exon | 2617348 | 2617446 | 2617348 | ID=MsG0280006485.01.T01:exon:518;Parent=MsG0280006485.01.T01 |
| Chr2 | CDS | 2617348 | 2617446 | 2617348 | ID=MsG0280006485.01.T01:cds;Parent=MsG0280006485.01.T01 |
| Chr2 | CDS | 2617213 | 2617300 | 2617213 | ID=MsG0280006485.01.T01:cds;Parent=MsG0280006485.01.T01 |
| Chr2 | CDS | 2617019 | 2617182 | 2617019 | ID=MsG0280006485.01.T01:cds;Parent=MsG0280006485.01.T01 |
| Gene Sequence |
| Protein sequence |
