AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013299.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013299.01.T01 MTR_3g040680 61.282 390 29 8 43 338 169 530 1.63e-142 414
MsG0380013299.01.T01 MTR_3g463760 46.049 367 120 11 43 337 166 526 8.26e-75 240
MsG0380013299.01.T01 MTR_8g010590 39.737 380 107 7 43 329 155 505 7.70e-71 229
MsG0380013299.01.T01 MTR_3g099120 37.337 383 118 7 43 331 161 515 6.41e-65 214
MsG0380013299.01.T01 MTR_8g010690 43.602 211 86 3 127 337 75 252 1.20e-44 154
MsG0380013299.01.T01 MTR_8g010590 51.562 128 23 2 43 131 155 282 7.10e-30 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013299.01.T01 AT2G26870 44.764 382 88 9 43 329 159 512 3.08e-88 274
MsG0380013299.01.T01 AT1G07230 40.617 389 107 10 43 336 167 526 3.54e-71 231
MsG0380013299.01.T01 AT3G48610 38.058 381 114 7 43 329 165 517 4.71e-66 217
MsG0380013299.01.T01 AT3G03530 41.739 345 126 11 43 318 152 490 5.67e-62 206
MsG0380013299.01.T01 AT3G03540 38.484 343 145 7 43 320 151 492 6.17e-58 196
MsG0380013299.01.T01 AT3G03520 34.794 388 128 8 43 334 152 510 1.96e-51 178
MsG0380013299.01.T01 AT3G03520 37.970 266 89 9 43 238 152 411 1.14e-39 145

Find 96 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTCTTGGTAAGAAATTT+AGG 0.126138 3:+34661207 None:intergenic
ACAAATGTCTCTTGGATTAT+TGG 0.130832 3:-34662017 MsG0380013299.01.T01:CDS
ATGTCTTTCCCTATAGTATT+TGG 0.162465 3:+34660535 None:intergenic
TCTCCCTTTCTTAACTTTAT+CGG 0.242779 3:+34660649 None:intergenic
ATTATTGGGTTGGTTTCTTA+TGG 0.246996 3:-34662002 MsG0380013299.01.T01:intron
AGGTCGTTATGCAAAGAAAA+TGG 0.247161 3:-34660455 MsG0380013299.01.T01:CDS
CTCCCTTTCTTAACTTTATC+GGG 0.255451 3:+34660650 None:intergenic
TGCTCCACCACAACATAATT+TGG 0.262697 3:+34664013 None:intergenic
TTCTGGGCTCTGTCCTTGTT+TGG 0.268885 3:+34661154 None:intergenic
CAAATGTCTCTTGGATTATT+GGG 0.274265 3:-34662016 MsG0380013299.01.T01:CDS
ATAACCTGGGCAATCAGTTC+TGG 0.278003 3:+34661137 None:intergenic
ACGTCGTATAGGTGAAATTT+TGG 0.286920 3:+34664070 None:intergenic
ATAAAGGATTTGTTTATAAT+AGG 0.287622 3:-34669185 MsG0380013299.01.T01:CDS
ACTAGTTATCCAAATACTAT+AGG 0.302792 3:-34660544 MsG0380013299.01.T01:CDS
CAACTTGCAGCAGTGCTAAA+AGG 0.339743 3:-34660580 MsG0380013299.01.T01:CDS
CATTGTTCTATAGGAACTTA+AGG 0.351241 3:-34664108 MsG0380013299.01.T01:intron
ATTGGATGATGATATTATAA+AGG 0.358416 3:-34669201 MsG0380013299.01.T01:CDS
ATTTGGTAACTTTCCTTCCT+TGG 0.373481 3:+34664030 None:intergenic
AAGCAGGGATGCTACGTTAC+TGG 0.374815 3:+34664218 None:intergenic
GTTATTGATGCAGTTGTTCA+TGG 0.377316 3:-34661308 MsG0380013299.01.T01:intron
TGGATTAGATAACCCATCAT+TGG 0.407196 3:+34669130 None:intergenic
CTAGTTATCCAAATACTATA+GGG 0.422960 3:-34660543 MsG0380013299.01.T01:CDS
TTTCTTAACTTTATCGGGGT+TGG 0.423464 3:+34660655 None:intergenic
TGTCTCTTGGATTATTGGGT+TGG 0.428299 3:-34662012 MsG0380013299.01.T01:CDS
TGGTTGATCTTATCCAATGA+TGG 0.428980 3:-34669143 MsG0380013299.01.T01:CDS
CAGTTGTTCATGGGCCCAAC+GGG 0.433659 3:-34661298 MsG0380013299.01.T01:CDS
CTATATCACCTTGGATTGAA+AGG 0.443057 3:-34663716 MsG0380013299.01.T01:CDS
CGCATTGACACTATCAGCTT+CGG 0.446477 3:+34662042 None:intergenic
GTTAAGAGGTTCTTTGAAGC+AGG 0.448531 3:-34660475 MsG0380013299.01.T01:CDS
GCTTAAATGTCACGTCGTAT+AGG 0.459929 3:+34664059 None:intergenic
TAACCTGGGCAATCAGTTCT+GGG 0.459946 3:+34661138 None:intergenic
GACGATCTTGTAGTCAAAGA+AGG 0.460808 3:+34660400 None:intergenic
ACTGGGTGATCTCCAGTCAT+TGG 0.465111 3:+34669110 None:intergenic
ATGCGACGGGTGATCATCAT+TGG 0.467263 3:+34663961 None:intergenic
GGATTTGTTTATAATAGGAT+TGG 0.473084 3:-34669180 MsG0380013299.01.T01:CDS
GAGTGCACGTAGAGTCGATT+AGG 0.473638 3:+34664260 None:intergenic
TCCAGCCCATTCATCTCTCT+TGG 0.480939 3:+34661194 None:intergenic
TCTTACCAAGAGAGATGAAT+GGG 0.482147 3:-34661199 MsG0380013299.01.T01:CDS
GATCTATGATGAGGCATGAA+TGG 0.483186 3:-34669224 None:intergenic
CACGTAGAGTCGATTAGGTT+GGG 0.487282 3:+34664265 None:intergenic
CGATTAGGTTGGGTGGAAGC+TGG 0.489069 3:+34664275 None:intergenic
TCAAGGACAAATGTTCGTTA+AGG 0.491055 3:-34663930 MsG0380013299.01.T01:CDS
ACATGGATGAAGCAGTTAAG+AGG 0.494562 3:-34660489 MsG0380013299.01.T01:CDS
GGTCGTTATGCAAAGAAAAT+GGG 0.495977 3:-34660454 MsG0380013299.01.T01:CDS
AACCCCGATAAAGTTAAGAA+AGG 0.497102 3:-34660653 MsG0380013299.01.T01:CDS
GAATGGGCTGGAACATTTGA+AGG 0.498967 3:-34661183 MsG0380013299.01.T01:CDS
AATGCGATACAAATGTCTCT+TGG 0.500878 3:-34662025 MsG0380013299.01.T01:CDS
AACTTTCCTTCCTTGGCATG+AGG 0.505768 3:+34664037 None:intergenic
ACCCCGATAAAGTTAAGAAA+GGG 0.510422 3:-34660652 MsG0380013299.01.T01:CDS
TTCTTACCAAGAGAGATGAA+TGG 0.513945 3:-34661200 MsG0380013299.01.T01:CDS
GGGTTATCTAATCCAATGAC+TGG 0.517865 3:-34669122 MsG0380013299.01.T01:CDS
GGTTGATCTTATCCAATGAT+GGG 0.518777 3:-34669142 MsG0380013299.01.T01:CDS
GCAGTTGTTCATGGGCCCAA+CGG 0.527279 3:-34661299 MsG0380013299.01.T01:intron
TATATCACCTTGGATTGAAA+GGG 0.537319 3:-34663715 MsG0380013299.01.T01:CDS
ACCGGTGCCCTTTCAATCCA+AGG 0.537372 3:+34663708 None:intergenic
TTATTGATGCAGTTGTTCAT+GGG 0.538618 3:-34661307 MsG0380013299.01.T01:intron
TTATGTAGCAATAGCATGAA+AGG 0.538626 3:-34660334 MsG0380013299.01.T01:three_prime_UTR
CTACCATTGCTATATCACCT+TGG 0.542037 3:-34663725 MsG0380013299.01.T01:CDS
ACCAAGAGAGATGAATGGGC+TGG 0.545131 3:-34661195 MsG0380013299.01.T01:CDS
GCACGTAGAGTCGATTAGGT+TGG 0.546979 3:+34664264 None:intergenic
GACATTTAAGCCTCATGCCA+AGG 0.551592 3:-34664047 MsG0380013299.01.T01:CDS
GTAGGAGTTGGTGACCCGTT+GGG 0.558732 3:+34661284 None:intergenic
CCGTCGCATGATGTGTATCA+AGG 0.559840 3:-34663947 MsG0380013299.01.T01:CDS
GACGGGTGATCATCATTGGC+AGG 0.561070 3:+34663965 None:intergenic
GATTGGTTGATCTTATCCGT+TGG 0.565167 3:-34669163 MsG0380013299.01.T01:CDS
GTTACCAAATTATGTTGTGG+TGG 0.565572 3:-34664017 MsG0380013299.01.T01:CDS
TTTAAGCCTCATGCCAAGGA+AGG 0.567585 3:-34664043 MsG0380013299.01.T01:CDS
CGTGCACTCGGCAACATCCG+CGG 0.570273 3:-34664246 MsG0380013299.01.T01:CDS
ATGATGAGGCATGAATGGAT+TGG 0.573713 3:-34669219 None:intergenic
TGTAGGAGTTGGTGACCCGT+TGG 0.575807 3:+34661283 None:intergenic
TAATCGACTCTACGTGCACT+CGG 0.578331 3:-34664258 MsG0380013299.01.T01:CDS
TCCCTTTCTTAACTTTATCG+GGG 0.581194 3:+34660651 None:intergenic
AAAGCTAAGTGAATTTCAGC+AGG 0.582285 3:-34660611 MsG0380013299.01.T01:CDS
AGGTTGGGTGGAAGCTGGCA+CGG 0.582538 3:+34664280 None:intergenic
AGGACAAATGTTCGTTAAGG+AGG 0.583390 3:-34663927 MsG0380013299.01.T01:CDS
ACACTCATCCATTGCAGCAA+CGG 0.587500 3:-34661250 MsG0380013299.01.T01:CDS
GATAAAGTTAAGAAAGGGAG+AGG 0.587867 3:-34660647 MsG0380013299.01.T01:CDS
ACCTTGGATTGAAAGGGCAC+CGG 0.588232 3:-34663709 MsG0380013299.01.T01:intron
CTTGATACACATCATGCGAC+GGG 0.588931 3:+34663948 None:intergenic
CAAGGTGATATAGCAATGGT+AGG 0.589859 3:+34663726 None:intergenic
GAGCCCAGAACTGATTGCCC+AGG 0.601081 3:-34661141 MsG0380013299.01.T01:intron
CCTTGATACACATCATGCGA+CGG 0.605905 3:+34663947 None:intergenic
TTCATATCTGATGTAGGAGT+TGG 0.616131 3:+34661272 None:intergenic
TTGAAGGTATTGTCCAAACA+AGG 0.622924 3:-34661167 MsG0380013299.01.T01:CDS
ATCTTCAAACACAAAACCAT+AGG 0.625369 3:-34660374 MsG0380013299.01.T01:exon
AAAGTTACCAAATTATGTTG+TGG 0.626625 3:-34664020 MsG0380013299.01.T01:CDS
TGAGTGTTCATATCTGATGT+AGG 0.627009 3:+34661266 None:intergenic
TAAGCAAGGAAAATATTACA+TGG 0.627619 3:-34660506 MsG0380013299.01.T01:CDS
GTAGAGTCGATTAGGTTGGG+TGG 0.632908 3:+34664268 None:intergenic
GGCAGGTAACAACTTAGTGT+CGG 0.637633 3:+34663982 None:intergenic
CTACGTTACTGGTGGCGCCG+CGG 0.640583 3:+34664229 None:intergenic
AATCCAAGGTGATATAGCAA+TGG 0.641455 3:+34663722 None:intergenic
ATTATGTTGTGGTGGAGCAG+CGG 0.656914 3:-34664009 MsG0380013299.01.T01:CDS
AAAGACATGAGTGTTAAGCA+AGG 0.660295 3:-34660520 MsG0380013299.01.T01:CDS
CAGGGATGCTACGTTACTGG+TGG 0.664673 3:+34664221 None:intergenic
CATTGGATAAGATCAACCAA+CGG 0.711098 3:+34669147 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATTTAATTCATATATA+CGG + Chr3:34668692-34668711 None:intergenic 10.0%
!! AATTATTAGTAAAAAACAAA+TGG - Chr3:34665812-34665831 MsG0380013299.01.T01:intron 10.0%
!! AATTTAAACAATTCAATTAT+AGG - Chr3:34660978-34660997 MsG0380013299.01.T01:intron 10.0%
!!! AACTTTTAAATCATTTTATT+TGG - Chr3:34662802-34662821 MsG0380013299.01.T01:intron 10.0%
!!! AATTTTGTGATAATTTTTTT+TGG + Chr3:34665969-34665988 None:intergenic 10.0%
!!! ATCATGTAATTTTTTTTTTA+AGG + Chr3:34664509-34664528 None:intergenic 10.0%
!!! ATTGAATTGTTTAAATTTTT+CGG + Chr3:34660975-34660994 None:intergenic 10.0%
!!! ATTTTGTGATAATTTTTTTT+GGG + Chr3:34665968-34665987 None:intergenic 10.0%
!!! GATTTTGATTTTAATATAAA+CGG + Chr3:34667871-34667890 None:intergenic 10.0%
!!! TAATTTTGCTAAAATATAAA+CGG - Chr3:34666452-34666471 MsG0380013299.01.T01:intron 10.0%
!!! TACATAATCTTATTTTATTT+TGG + Chr3:34669092-34669111 None:intergenic 10.0%
!!! TATTATCTAAAATTAAGTTA+AGG - Chr3:34666418-34666437 MsG0380013299.01.T01:intron 10.0%
!! AAAAAAAAAAATTACACTAC+TGG - Chr3:34663216-34663235 MsG0380013299.01.T01:intron 15.0%
!! AAGTATAATAATTCAATTAG+GGG - Chr3:34664053-34664072 MsG0380013299.01.T01:CDS 15.0%
!! ATGAAGAAAAAAAAAAATCT+TGG - Chr3:34665084-34665103 MsG0380013299.01.T01:intron 15.0%
!! GAAGTATAATAATTCAATTA+GGG - Chr3:34664052-34664071 MsG0380013299.01.T01:CDS 15.0%
!! GATATATTTGGTTAAAAAAT+TGG + Chr3:34666782-34666801 None:intergenic 15.0%
!! TAAAATTTAAAAATTTGACG+TGG + Chr3:34660480-34660499 None:intergenic 15.0%
!! TAAATTTGATGTAATTCATA+TGG + Chr3:34661487-34661506 None:intergenic 15.0%
!! TAATTAATATTGTATATGAG+TGG + Chr3:34664599-34664618 None:intergenic 15.0%
!! TATGAAAGTTATGATAATTA+AGG + Chr3:34665120-34665139 None:intergenic 15.0%
!! TATGAATTACATCAAATTTA+TGG - Chr3:34661487-34661506 MsG0380013299.01.T01:intron 15.0%
!! TTTACAAACTATTAACATAT+TGG - Chr3:34666639-34666658 MsG0380013299.01.T01:intron 15.0%
!!! AAAAGTTTTGATTAGATTAA+AGG - Chr3:34667935-34667954 MsG0380013299.01.T01:intron 15.0%
!!! AACTATTTTCTTTAAACATA+TGG + Chr3:34663600-34663619 None:intergenic 15.0%
!!! AATTTTGCTAAAATATAAAC+GGG - Chr3:34666453-34666472 MsG0380013299.01.T01:intron 15.0%
!!! ACTATTTTCTTTAAACATAT+GGG + Chr3:34663599-34663618 None:intergenic 15.0%
!!! AGAAGTATAATAATTCAATT+AGG - Chr3:34664051-34664070 MsG0380013299.01.T01:CDS 15.0%
!!! ATAAAGGATTTGTTTATAAT+AGG - Chr3:34660254-34660273 MsG0380013299.01.T01:three_prime_UTR 15.0%
!!! ATAAGTTTTGTCTAAAAAAA+AGG + Chr3:34660391-34660410 None:intergenic 15.0%
!!! ATATGTTTTGTCTAAAAAAA+AGG + Chr3:34660580-34660599 None:intergenic 15.0%
!!! ATGTTATTACGATTATTTTT+AGG - Chr3:34667354-34667373 MsG0380013299.01.T01:intron 15.0%
!!! CGTTAATTTTTTAATTTTTC+CGG + Chr3:34660843-34660862 None:intergenic 15.0%
!!! CTTTTACAAATCATTTTATT+TGG - Chr3:34663021-34663040 MsG0380013299.01.T01:intron 15.0%
!!! GTTAATTTTTTAATTTTTCC+GGG + Chr3:34660842-34660861 None:intergenic 15.0%
!!! TAATTTTTTAAGTATAACCT+AGG + Chr3:34661646-34661665 None:intergenic 15.0%
!!! TAGAATTTCTTATATTTTGT+GGG + Chr3:34667909-34667928 None:intergenic 15.0%
!!! TGCTTTTTTTTTTTTGAAAA+GGG - Chr3:34663098-34663117 MsG0380013299.01.T01:intron 15.0%
!!! TTAATTTTTTAATTTTTCCG+GGG + Chr3:34660841-34660860 None:intergenic 15.0%
!!! TTAGAATTTCTTATATTTTG+TGG + Chr3:34667910-34667929 None:intergenic 15.0%
!!! TTAGTTTTATTGGTTTTATT+TGG - Chr3:34666503-34666522 MsG0380013299.01.T01:intron 15.0%
!!! TTGAATTGTTTAAATTTTTC+GGG + Chr3:34660974-34660993 None:intergenic 15.0%
!!! TTGCTTTTTTTTTTTTGAAA+AGG - Chr3:34663097-34663116 MsG0380013299.01.T01:intron 15.0%
!!! TTTTATTTAGATTAGATTAG+TGG - Chr3:34663815-34663834 MsG0380013299.01.T01:intron 15.0%
!! AAGAGTTAATAAAGCAAAAA+AGG + Chr3:34664158-34664177 None:intergenic 20.0%
!! AATTGTGATACAAAACTAAT+TGG - Chr3:34664764-34664783 MsG0380013299.01.T01:intron 20.0%
!! ATAAAAATTACAAATAGCAG+AGG - Chr3:34663959-34663978 MsG0380013299.01.T01:CDS 20.0%
!! ATCTATAAAACAAATAGAAC+TGG - Chr3:34666856-34666875 MsG0380013299.01.T01:intron 20.0%
!! ATGTCTCTTATAAATATGAT+CGG + Chr3:34666731-34666750 None:intergenic 20.0%
!! ATTAAAAAATTAACGACCAT+AGG - Chr3:34660848-34660867 MsG0380013299.01.T01:intron 20.0%
!! ATTGGATGATGATATTATAA+AGG - Chr3:34660238-34660257 MsG0380013299.01.T01:three_prime_UTR 20.0%
!! CCTTATTGAAATTATTGAAA+CGG - Chr3:34668096-34668115 MsG0380013299.01.T01:intron 20.0%
!! CTATTAAAAGTGAAGTTAAA+TGG + Chr3:34665677-34665696 None:intergenic 20.0%
!! GATTAAAACCCAAAAATATA+TGG + Chr3:34667146-34667165 None:intergenic 20.0%
!! GTTCAAAAAAAACTATTGAT+TGG + Chr3:34664667-34664686 None:intergenic 20.0%
!! TAAAAATTACAAATAGCAGA+GGG - Chr3:34663960-34663979 MsG0380013299.01.T01:CDS 20.0%
!! TGAAGAAAAAAAATCAAAGA+AGG + Chr3:34666100-34666119 None:intergenic 20.0%
!! TTTGATGAATAAAGCAAAAA+AGG + Chr3:34664123-34664142 None:intergenic 20.0%
!!! AAAGTTCAAACATTGAATTT+TGG + Chr3:34663543-34663562 None:intergenic 20.0%
!!! AAGAATATTCGTTTTATTTC+GGG + Chr3:34662487-34662506 None:intergenic 20.0%
!!! AATTTAGCTATGATTGTTTT+TGG - Chr3:34666146-34666165 MsG0380013299.01.T01:intron 20.0%
!!! AATTTATCAAGTCATTGATT+GGG - Chr3:34661197-34661216 MsG0380013299.01.T01:CDS 20.0%
!!! ACATATTACTTTTTGTTTGA+AGG - Chr3:34663284-34663303 MsG0380013299.01.T01:intron 20.0%
!!! ACTTAAAAAATTAGCTTTTG+AGG - Chr3:34661653-34661672 MsG0380013299.01.T01:intron 20.0%
!!! ATGCTTTTGTGAATTATTAT+TGG - Chr3:34668544-34668563 MsG0380013299.01.T01:intron 20.0%
!!! ATTTTGCTAAAATATAAACG+GGG - Chr3:34666454-34666473 MsG0380013299.01.T01:intron 20.0%
!!! CACTCAAATTTTAGTTTTAT+TGG - Chr3:34666493-34666512 MsG0380013299.01.T01:intron 20.0%
!!! CATTTAACTTCACTTTTAAT+AGG - Chr3:34665675-34665694 MsG0380013299.01.T01:intron 20.0%
!!! CTTTTGAAGAATTTAGTATA+CGG + Chr3:34663722-34663741 None:intergenic 20.0%
!!! GAAGAATATTCGTTTTATTT+CGG + Chr3:34662488-34662507 None:intergenic 20.0%
!!! GACTTTAAACAATTTTTCAA+CGG - Chr3:34661013-34661032 MsG0380013299.01.T01:intron 20.0%
!!! GAGATATTTTTTTTCATGAA+GGG + Chr3:34661917-34661936 None:intergenic 20.0%
!!! GCTTTAAAACTTTATTAAGT+CGG - Chr3:34661850-34661869 MsG0380013299.01.T01:intron 20.0%
!!! GCTTTTTTTTTTTTGAAAAG+GGG - Chr3:34663099-34663118 MsG0380013299.01.T01:intron 20.0%
!!! TCAACAAAAGTTGATATATT+TGG + Chr3:34666794-34666813 None:intergenic 20.0%
!!! TCTAATGAGGTATATTTTTT+AGG - Chr3:34661620-34661639 MsG0380013299.01.T01:intron 20.0%
!!! TTACAAATCATTTTATTTGG+TGG - Chr3:34663024-34663043 MsG0380013299.01.T01:intron 20.0%
!!! TTTCTTCAGTTTTTTTGTTT+GGG - Chr3:34666112-34666131 MsG0380013299.01.T01:intron 20.0%
!!! TTTTAGGTACAAATTAAGAT+AGG - Chr3:34667370-34667389 MsG0380013299.01.T01:intron 20.0%
!!! TTTTCACACTACTTTAAAAA+TGG - Chr3:34667084-34667103 MsG0380013299.01.T01:intron 20.0%
!!! TTTTCTTCAGTTTTTTTGTT+TGG - Chr3:34666111-34666130 MsG0380013299.01.T01:intron 20.0%
! AAAAAATGACACCTAATAGA+TGG + Chr3:34668000-34668019 None:intergenic 25.0%
! AAAAGAAGTGAAATCCAATT+TGG + Chr3:34666994-34667013 None:intergenic 25.0%
! AAACTAAACCCAAACATAAA+CGG - Chr3:34662423-34662442 MsG0380013299.01.T01:intron 25.0%
! AAAGTAGTGTGAAAATTAGA+AGG + Chr3:34667079-34667098 None:intergenic 25.0%
! AAAGTTACCAAATTATGTTG+TGG - Chr3:34665419-34665438 MsG0380013299.01.T01:intron 25.0%
! AAATGTGGATATTAAATGTG+TGG + Chr3:34661777-34661796 None:intergenic 25.0%
! AATGAAAAGTTAGAGTTACA+TGG + Chr3:34664623-34664642 None:intergenic 25.0%
! AATGTGTCGAATTTATTCAA+AGG + Chr3:34661421-34661440 None:intergenic 25.0%
! AATTACATCATCAAGATCAA+TGG - Chr3:34667553-34667572 MsG0380013299.01.T01:intron 25.0%
! ACTAGTTATCCAAATACTAT+AGG - Chr3:34668895-34668914 MsG0380013299.01.T01:intron 25.0%
! ATAGATAGATAGATCATAGA+AGG + Chr3:34662078-34662097 None:intergenic 25.0%
! ATCATAGCTAAATTTCAACT+TGG + Chr3:34666140-34666159 None:intergenic 25.0%
! ATCGTATGTAATCAAGAATA+GGG + Chr3:34665577-34665596 None:intergenic 25.0%
! ATCTTATCCCATCATAAAAT+TGG - Chr3:34666552-34666571 MsG0380013299.01.T01:intron 25.0%
! ATTAAGCAATATAGTGATGA+GGG + Chr3:34668056-34668075 None:intergenic 25.0%
! ATTACATCATCAAGATCAAT+GGG - Chr3:34667554-34667573 MsG0380013299.01.T01:intron 25.0%
! CAAACAAAAAGTAATATGTG+TGG + Chr3:34663283-34663302 None:intergenic 25.0%
! CAAACACGTTATTAAATAGA+AGG + Chr3:34664404-34664423 None:intergenic 25.0%
! CCGTTTCAATAATTTCAATA+AGG + Chr3:34668099-34668118 None:intergenic 25.0%
! CGTATAATTTACCATCTATT+AGG - Chr3:34667986-34668005 MsG0380013299.01.T01:intron 25.0%
! CTAGTTATCCAAATACTATA+GGG - Chr3:34668896-34668915 MsG0380013299.01.T01:intron 25.0%
! CTATATAAGTATGTAGTGAT+GGG - Chr3:34667113-34667132 MsG0380013299.01.T01:intron 25.0%
! GAATAATTTGACAATGTTGA+TGG + Chr3:34662221-34662240 None:intergenic 25.0%
! GAATTTATCAAGTCATTGAT+TGG - Chr3:34661196-34661215 MsG0380013299.01.T01:CDS 25.0%
! GATAATACAACAAAAATCTC+AGG - Chr3:34662644-34662663 MsG0380013299.01.T01:intron 25.0%
! GATGGTAAATTATACGATTT+CGG + Chr3:34667982-34668001 None:intergenic 25.0%
! GATGTTGACACTTTATAATA+AGG - Chr3:34666369-34666388 MsG0380013299.01.T01:intron 25.0%
! GATTTGGAAAAACTTCAAAT+TGG - Chr3:34664342-34664361 MsG0380013299.01.T01:intron 25.0%
! TAAGCAAGGAAAATATTACA+TGG - Chr3:34668933-34668952 MsG0380013299.01.T01:intron 25.0%
! TAGATAGATAGATCATAGAA+GGG + Chr3:34662077-34662096 None:intergenic 25.0%
! TCTATATAAGTATGTAGTGA+TGG - Chr3:34667112-34667131 MsG0380013299.01.T01:intron 25.0%
! TCTTAGTATATAATACATGC+CGG - Chr3:34664834-34664853 MsG0380013299.01.T01:intron 25.0%
! TGACTTCTCTTAAAAATGAT+TGG - Chr3:34660506-34660525 MsG0380013299.01.T01:CDS 25.0%
! TTAAGAAGTGATCACTTATA+AGG - Chr3:34668492-34668511 MsG0380013299.01.T01:intron 25.0%
! TTTAATGTAATCACAAGTGT+CGG - Chr3:34668398-34668417 MsG0380013299.01.T01:intron 25.0%
! TTTCTTTAAACATATGGGAT+AGG + Chr3:34663594-34663613 None:intergenic 25.0%
!! AAAGGTATGATATTGTAGAT+TGG - Chr3:34663988-34664007 MsG0380013299.01.T01:CDS 25.0%
!! AAATTGGATTTCACTTCTTT+TGG - Chr3:34666993-34667012 MsG0380013299.01.T01:intron 25.0%
!! AATCGTTAATTGCGATTTTA+TGG - Chr3:34663777-34663796 MsG0380013299.01.T01:intron 25.0%
!! ACATTTTGCAATTTGACAAA+CGG + Chr3:34667170-34667189 None:intergenic 25.0%
!! CATTCTATACAATTTTGTGT+CGG - Chr3:34660899-34660918 MsG0380013299.01.T01:intron 25.0%
!! CTTAAAATTTTGCTCATTAG+TGG + Chr3:34667662-34667681 None:intergenic 25.0%
!! GATGAAATCTTTTATGTTGA+TGG + Chr3:34666067-34666086 None:intergenic 25.0%
!! GGAGTTAGTATATTTTATAG+AGG - Chr3:34663891-34663910 MsG0380013299.01.T01:intron 25.0%
!! GGATTTGTTTATAATAGGAT+TGG - Chr3:34660259-34660278 MsG0380013299.01.T01:three_prime_UTR 25.0%
!! GTTAGTATATTTTATAGAGG+AGG - Chr3:34663894-34663913 MsG0380013299.01.T01:intron 25.0%
!! TGTTTTGTCTAAAAAAAAGG+AGG + Chr3:34660577-34660596 None:intergenic 25.0%
!! TTATTGGATTTTCAATTGCA+TGG + Chr3:34662344-34662363 None:intergenic 25.0%
!! TTTTCAACGGTTAATTTTAG+TGG - Chr3:34661026-34661045 MsG0380013299.01.T01:intron 25.0%
!!! AACTTCACTTTTAATAGGTT+GGG - Chr3:34665680-34665699 MsG0380013299.01.T01:intron 25.0%
!!! AACTTCAGTGTTTTTTCTTT+TGG + Chr3:34661391-34661410 None:intergenic 25.0%
!!! AATTGTTTAAATTTTTCGGG+TGG + Chr3:34660971-34660990 None:intergenic 25.0%
!!! AGTTTTGTCTAAAAAAAAGG+AGG + Chr3:34660388-34660407 None:intergenic 25.0%
!!! ATCAGTAGATAATTGACTTT+TGG + Chr3:34667801-34667820 None:intergenic 25.0%
!!! ATCATTTTTAAGAGAAGTCA+CGG + Chr3:34660506-34660525 None:intergenic 25.0%
!!! ATTGGTTAATTAGTTTTGAC+TGG - Chr3:34663133-34663152 MsG0380013299.01.T01:intron 25.0%
!!! ATTGTTTTTGGTTTTGGTTA+TGG - Chr3:34666158-34666177 MsG0380013299.01.T01:intron 25.0%
!!! CGAGATATTTTTTTTCATGA+AGG + Chr3:34661918-34661937 None:intergenic 25.0%
!!! CTTATTTTATTTTGGTCCTA+TGG + Chr3:34669084-34669103 None:intergenic 25.0%
!!! GGATTTTTTTCAATGAAATC+TGG - Chr3:34666196-34666215 MsG0380013299.01.T01:intron 25.0%
!!! GTTAAAAACGAATGTTTTAG+AGG + Chr3:34666670-34666689 None:intergenic 25.0%
!!! TAACTTCACTTTTAATAGGT+TGG - Chr3:34665679-34665698 MsG0380013299.01.T01:intron 25.0%
!!! TTATGGCTGATTTTGTTTAT+GGG - Chr3:34666175-34666194 MsG0380013299.01.T01:intron 25.0%
!!! TTTAGCTTAACCAAGATTTT+GGG - Chr3:34662862-34662881 MsG0380013299.01.T01:intron 25.0%
!!! TTTGTAAAAGTTTTTTTCCG+CGG + Chr3:34663011-34663030 None:intergenic 25.0%
!!! TTTTAGCTTAACCAAGATTT+TGG - Chr3:34662861-34662880 MsG0380013299.01.T01:intron 25.0%
AAAACCATCGTCTTTAGTAA+TGG - Chr3:34662363-34662382 MsG0380013299.01.T01:intron 30.0%
AAAGTGAAGTTAAATGGTTC+TGG + Chr3:34665671-34665690 None:intergenic 30.0%
AAATAGCAGAGGGTTAAAAA+AGG - Chr3:34663970-34663989 MsG0380013299.01.T01:CDS 30.0%
AACACCAAACAATAGTTATG+AGG - Chr3:34664690-34664709 MsG0380013299.01.T01:intron 30.0%
AACTTTGATAAGAGAACAGT+AGG + Chr3:34660437-34660456 None:intergenic 30.0%
AAGTGACATGATTTCTCATA+TGG + Chr3:34664888-34664907 None:intergenic 30.0%
AAGTGCAACACTTACTATAA+TGG + Chr3:34661293-34661312 None:intergenic 30.0%
AATGCCTCATAACTATTGTT+TGG + Chr3:34664697-34664716 None:intergenic 30.0%
ACAAAATTGCAAGCAAACTA+TGG + Chr3:34664304-34664323 None:intergenic 30.0%
ACAAATGTCTCTTGGATTAT+TGG - Chr3:34667422-34667441 MsG0380013299.01.T01:intron 30.0%
ATCTACTGATCACTTTCATT+GGG - Chr3:34667811-34667830 MsG0380013299.01.T01:intron 30.0%
ATCTTCAAACACAAAACCAT+AGG - Chr3:34669065-34669084 MsG0380013299.01.T01:intron 30.0%
ATGATCAATGATGAGAACAT+TGG + Chr3:34660358-34660377 None:intergenic 30.0%
ATGCAAAAAGAAAGACTTAC+CGG + Chr3:34665752-34665771 None:intergenic 30.0%
ATGTCTTTCCCTATAGTATT+TGG + Chr3:34668907-34668926 None:intergenic 30.0%
ATTCGTGAAAAAAAGTTACG+AGG - Chr3:34664714-34664733 MsG0380013299.01.T01:intron 30.0%
ATTGAACTCTTTAGATGACA+TGG + Chr3:34662007-34662026 None:intergenic 30.0%
ATTGTCCATAAGTTTGATCT+AGG + Chr3:34667492-34667511 None:intergenic 30.0%
CAAACAACACATACCAAAAT+GGG - Chr3:34662242-34662261 MsG0380013299.01.T01:intron 30.0%
CAAATGTCTCTTGGATTATT+GGG - Chr3:34667423-34667442 MsG0380013299.01.T01:intron 30.0%
CAATAAGGGAACAAATATTC+GGG - Chr3:34662557-34662576 MsG0380013299.01.T01:intron 30.0%
CATAACTTTCATATGTTCGT+AGG - Chr3:34665127-34665146 MsG0380013299.01.T01:intron 30.0%
CATCGTATGTAATCAAGAAT+AGG + Chr3:34665578-34665597 None:intergenic 30.0%
CATTAAGCAATATAGTGATG+AGG + Chr3:34668057-34668076 None:intergenic 30.0%
CATTGTTCTATAGGAACTTA+AGG - Chr3:34665331-34665350 MsG0380013299.01.T01:intron 30.0%
CTAACTTAAACTTTACTCCT+TGG + Chr3:34661975-34661994 None:intergenic 30.0%
GATGTGAATATTGACAAACT+GGG + Chr3:34660538-34660557 None:intergenic 30.0%
GATGTTGACACTTTATCATA+AGG - Chr3:34666319-34666338 MsG0380013299.01.T01:intron 30.0%
GCAATAAGGGAACAAATATT+CGG - Chr3:34662556-34662575 MsG0380013299.01.T01:intron 30.0%
GTTTATTCAAGCTAGACATA+TGG - Chr3:34666582-34666601 MsG0380013299.01.T01:intron 30.0%
TATATCACCTTGGATTGAAA+GGG - Chr3:34665724-34665743 MsG0380013299.01.T01:intron 30.0%
TATCTACTGATCACTTTCAT+TGG - Chr3:34667810-34667829 MsG0380013299.01.T01:intron 30.0%
TCAAACAACACATACCAAAA+TGG - Chr3:34662241-34662260 MsG0380013299.01.T01:intron 30.0%
TCATGTCACAAATCAATAGA+TGG + Chr3:34665041-34665060 None:intergenic 30.0%
TCATTAACCTTTGCATAGAA+TGG + Chr3:34660738-34660757 None:intergenic 30.0%
TCTCCCTTTCTTAACTTTAT+CGG + Chr3:34668793-34668812 None:intergenic 30.0%
TCTCTCTTGGTAAGAAATTT+AGG + Chr3:34668235-34668254 None:intergenic 30.0%
TGAGAAAAACGGTTATTATC+CGG + Chr3:34662988-34663007 None:intergenic 30.0%
TGATGTGAATATTGACAAAC+TGG + Chr3:34660539-34660558 None:intergenic 30.0%
TTACATCATCAAGATCAATG+GGG - Chr3:34667555-34667574 MsG0380013299.01.T01:intron 30.0%
TTATCCTATATCATCCCTTT+AGG - Chr3:34664972-34664991 MsG0380013299.01.T01:intron 30.0%
TTATGTAGCAATAGCATGAA+AGG - Chr3:34669105-34669124 MsG0380013299.01.T01:intron 30.0%
TTATTGATGCAGTTGTTCAT+GGG - Chr3:34668132-34668151 MsG0380013299.01.T01:intron 30.0%
TTGGTGCATGTTATATGATT+TGG - Chr3:34664326-34664345 MsG0380013299.01.T01:intron 30.0%
TTGTGAAACTAGATTTGAGT+AGG + Chr3:34667033-34667052 None:intergenic 30.0%
TTTGACAGTCTACATGATAA+TGG - Chr3:34665270-34665289 MsG0380013299.01.T01:intron 30.0%
TTTGTCCTAGATCAAACTTA+TGG - Chr3:34667484-34667503 MsG0380013299.01.T01:intron 30.0%
TTTGTGTAGAAACAAAGTGT+AGG + Chr3:34667765-34667784 None:intergenic 30.0%
! AAAAATTACACTACTGGTCT+CGG - Chr3:34663222-34663241 MsG0380013299.01.T01:intron 30.0%
! AAAGTTACGAGGCATTAAAT+TGG - Chr3:34664725-34664744 MsG0380013299.01.T01:intron 30.0%
! ATCTAGGACAAAACAACTAA+TGG + Chr3:34667476-34667495 None:intergenic 30.0%
! ATGGACAATTTTCTACTTGA+TGG - Chr3:34667503-34667522 MsG0380013299.01.T01:intron 30.0%
! ATTAATCTCTCGAGTATTGT+GGG + Chr3:34662945-34662964 None:intergenic 30.0%
! ATTGTGTTAAAAAGTGTGTG+TGG - Chr3:34661558-34661577 MsG0380013299.01.T01:intron 30.0%
! CTAAAGACGATGGTTTTTAT+TGG + Chr3:34662360-34662379 None:intergenic 30.0%
! TAGTAGTAGAGTGAGTTTTT+CGG + Chr3:34662271-34662290 None:intergenic 30.0%
! TCATTTTGTGTAGTCTAATG+AGG - Chr3:34661607-34661626 MsG0380013299.01.T01:intron 30.0%
! TCTCCTATCAAAGTTTTACA+CGG - Chr3:34660628-34660647 MsG0380013299.01.T01:CDS 30.0%
! TGGACAATTTTCTACTTGAT+GGG - Chr3:34667504-34667523 MsG0380013299.01.T01:intron 30.0%
! TTGTGTTAAAAAGTGTGTGT+GGG - Chr3:34661559-34661578 MsG0380013299.01.T01:intron 30.0%
! TTTTCCATTACTAAAGACGA+TGG + Chr3:34662370-34662389 None:intergenic 30.0%
! TTTTCTCAAAATTTACGTCG+AGG + Chr3:34668370-34668389 None:intergenic 30.0%
!! AATTTTAAGAGTGATGGCAA+AGG - Chr3:34667673-34667692 MsG0380013299.01.T01:intron 30.0%
!! ACTGTCAAAATAGTTTGTTG+TGG + Chr3:34665259-34665278 None:intergenic 30.0%
!! ATTATTGGGTTGGTTTCTTA+TGG - Chr3:34667437-34667456 MsG0380013299.01.T01:intron 30.0%
!! ATTTTAAGAGTGATGGCAAA+GGG - Chr3:34667674-34667693 MsG0380013299.01.T01:intron 30.0%
!! CTATTGATTTGTGACATGAA+AGG - Chr3:34665042-34665061 MsG0380013299.01.T01:intron 30.0%
!! CTGTCAAAATAGTTTGTTGT+GGG + Chr3:34665258-34665277 None:intergenic 30.0%
!! GAGCAAAATTTTAAGAGTGA+TGG - Chr3:34667667-34667686 MsG0380013299.01.T01:intron 30.0%
!! GATGTTTTTAACAGAAGTCA+CGG + Chr3:34660692-34660711 None:intergenic 30.0%
!! GTTATGGCTGATTTTGTTTA+TGG - Chr3:34666174-34666193 MsG0380013299.01.T01:intron 30.0%
!! TTCTTTTTCCTAATTTGTGC+CGG + Chr3:34664856-34664875 None:intergenic 30.0%
!! TTTGCTTGCAATTTTGTTGT+TGG - Chr3:34664307-34664326 MsG0380013299.01.T01:intron 30.0%
!!! AAAAATTAGCTTTTGAGGCT+AGG - Chr3:34661658-34661677 MsG0380013299.01.T01:intron 30.0%
!!! AAGGTGAGGTTTTATTTGTT+TGG + Chr3:34662193-34662212 None:intergenic 30.0%
!!! AATAGATGGTGTTGTTTTTC+GGG + Chr3:34665027-34665046 None:intergenic 30.0%
!!! AGGTGAGGTTTTATTTGTTT+GGG + Chr3:34662192-34662211 None:intergenic 30.0%
!!! ATATTCGTTTTATTTCGGGT+CGG + Chr3:34662483-34662502 None:intergenic 30.0%
!!! ATCTTTTATGTTGATGGTGT+TGG + Chr3:34666061-34666080 None:intergenic 30.0%
!!! ATTTTTTAATTTTTCCGGGG+TGG + Chr3:34660838-34660857 None:intergenic 30.0%
!!! CAATAGATGGTGTTGTTTTT+CGG + Chr3:34665028-34665047 None:intergenic 30.0%
!!! CTATTAGGTGTCATTTTTTC+AGG - Chr3:34668001-34668020 MsG0380013299.01.T01:intron 30.0%
!!! GCTATGATTGTTTTTGGTTT+TGG - Chr3:34666152-34666171 MsG0380013299.01.T01:intron 30.0%
!!! GTTTTATTTGTTTGGGATAG+TGG + Chr3:34662185-34662204 None:intergenic 30.0%
!!! TACAATTTTGTGTCGGTTTT+AGG - Chr3:34660906-34660925 MsG0380013299.01.T01:intron 30.0%
!!! TCTTTTATGTTGATGGTGTT+GGG + Chr3:34666060-34666079 None:intergenic 30.0%
!!! TGCTGTTTGGTATTGATTTT+GGG - Chr3:34661312-34661331 MsG0380013299.01.T01:intron 30.0%
!!! TGGTTTTGTGTTTGAAGATT+TGG + Chr3:34669064-34669083 None:intergenic 30.0%
!!! TTGCTGTTTGGTATTGATTT+TGG - Chr3:34661311-34661330 MsG0380013299.01.T01:intron 30.0%
!!! TTTTTTAATTTTTCCGGGGT+GGG + Chr3:34660837-34660856 None:intergenic 30.0%
AAAGACATGAGTGTTAAGCA+AGG - Chr3:34668919-34668938 MsG0380013299.01.T01:intron 35.0%
AAAGCCTAAAGGGATGATAT+AGG + Chr3:34664979-34664998 None:intergenic 35.0%
AAAGCTAAGTGAATTTCAGC+AGG - Chr3:34668828-34668847 MsG0380013299.01.T01:intron 35.0%
AAAGGGGAAAAAGTTGCTAT+TGG - Chr3:34663115-34663134 MsG0380013299.01.T01:intron 35.0%
AAATCTCAGGAAGTGATGAA+TGG - Chr3:34662657-34662676 MsG0380013299.01.T01:intron 35.0%
AACCCCGATAAAGTTAAGAA+AGG - Chr3:34668786-34668805 MsG0380013299.01.T01:intron 35.0%
AACTTTCATATGTTCGTAGG+TGG - Chr3:34665130-34665149 MsG0380013299.01.T01:intron 35.0%
AACTTTGATAGGAGAACAGT+AGG + Chr3:34660623-34660642 None:intergenic 35.0%
AATCCAAGGTGATATAGCAA+TGG + Chr3:34665720-34665739 None:intergenic 35.0%
AATGCGATACAAATGTCTCT+TGG - Chr3:34667414-34667433 MsG0380013299.01.T01:intron 35.0%
ACCCCGATAAAGTTAAGAAA+GGG - Chr3:34668787-34668806 MsG0380013299.01.T01:intron 35.0%
AGGTCGTTATGCAAAGAAAA+TGG - Chr3:34668984-34669003 MsG0380013299.01.T01:intron 35.0%
AGTGTCTATAAACAGCAACA+TGG + Chr3:34662695-34662714 None:intergenic 35.0%
AGTGTGTGATGTTAACCATT+TGG - Chr3:34661582-34661601 MsG0380013299.01.T01:intron 35.0%
ATAGAAGTGAGCAATAACCT+GGG + Chr3:34668318-34668337 None:intergenic 35.0%
ATGTGTGTGTTAAAGCCTAA+AGG + Chr3:34664990-34665009 None:intergenic 35.0%
ATTCATCGAGTCATCTATGA+TGG - Chr3:34661098-34661117 MsG0380013299.01.T01:intron 35.0%
ATTGTGGGTAGCAATAATTG+AGG - Chr3:34667301-34667320 MsG0380013299.01.T01:intron 35.0%
ATTTATAACTGTGCAACCCT+AGG - Chr3:34667711-34667730 MsG0380013299.01.T01:intron 35.0%
CAAACTTCTAGTCGAGATTT+GGG - Chr3:34667578-34667597 MsG0380013299.01.T01:intron 35.0%
CATTGGATAAGATCAACCAA+CGG + Chr3:34660295-34660314 None:intergenic 35.0%
CTACACAAAATGAAGCCAAA+TGG + Chr3:34661600-34661619 None:intergenic 35.0%
CTATATCACCTTGGATTGAA+AGG - Chr3:34665723-34665742 MsG0380013299.01.T01:intron 35.0%
CTCCCTTTCTTAACTTTATC+GGG + Chr3:34668792-34668811 None:intergenic 35.0%
CTTTACTCCTTGGTATAGTA+TGG + Chr3:34661965-34661984 None:intergenic 35.0%
GAATACTGGCAACATATCAA+TGG + Chr3:34667222-34667241 None:intergenic 35.0%
GATAAAGTTAAGAAAGGGAG+AGG - Chr3:34668792-34668811 MsG0380013299.01.T01:intron 35.0%
GATATGTTGCCAGTATTCTT+GGG - Chr3:34667224-34667243 MsG0380013299.01.T01:intron 35.0%
GATCTTCATCATACAAAGCT+AGG + Chr3:34666225-34666244 None:intergenic 35.0%
GATGAGTGGTACTAAAAAGT+TGG - Chr3:34663860-34663879 MsG0380013299.01.T01:intron 35.0%
GCTTTGTATGATGAAGATCT+AGG - Chr3:34666226-34666245 MsG0380013299.01.T01:intron 35.0%
GGTCGTTATGCAAAGAAAAT+GGG - Chr3:34668985-34669004 MsG0380013299.01.T01:intron 35.0%
GGTTGATCTTATCCAATGAT+GGG - Chr3:34660297-34660316 MsG0380013299.01.T01:three_prime_UTR 35.0%
GTTACCAAATTATGTTGTGG+TGG - Chr3:34665422-34665441 MsG0380013299.01.T01:intron 35.0%
GTTATTGATGCAGTTGTTCA+TGG - Chr3:34668131-34668150 MsG0380013299.01.T01:intron 35.0%
TACCCGTGTAAAACTTTGAT+AGG + Chr3:34660634-34660653 None:intergenic 35.0%
TAGTAGATAGTGCTAAACAG+CGG - Chr3:34661149-34661168 MsG0380013299.01.T01:CDS 35.0%
TCAAGGACAAATGTTCGTTA+AGG - Chr3:34665509-34665528 MsG0380013299.01.T01:intron 35.0%
TCAATTGCATGGAATTGTGA+GGG + Chr3:34662333-34662352 None:intergenic 35.0%
TCACTCGTTTCAAGCAATAA+GGG - Chr3:34662543-34662562 MsG0380013299.01.T01:intron 35.0%
TCCCTTTCTTAACTTTATCG+GGG + Chr3:34668791-34668810 None:intergenic 35.0%
TCCTATAGAACAATGTTGCT+GGG + Chr3:34665326-34665345 None:intergenic 35.0%
TCTACTGATCACTTTCATTG+GGG - Chr3:34667812-34667831 MsG0380013299.01.T01:intron 35.0%
TCTTACCAAGAGAGATGAAT+GGG - Chr3:34668240-34668259 MsG0380013299.01.T01:intron 35.0%
TCTTCTACCATTCTATGCAA+AGG - Chr3:34660728-34660747 MsG0380013299.01.T01:intron 35.0%
TGAATTCGAACCCAAAATCT+TGG + Chr3:34662875-34662894 None:intergenic 35.0%
TGACATGATTTCTCATATGG+AGG + Chr3:34664885-34664904 None:intergenic 35.0%
TGAGTGTTCATATCTGATGT+AGG + Chr3:34668176-34668195 None:intergenic 35.0%
TGATATGTTGCCAGTATTCT+TGG - Chr3:34667223-34667242 MsG0380013299.01.T01:intron 35.0%
TGCAAAGGTTAATGAGTCAA+CGG - Chr3:34660743-34660762 MsG0380013299.01.T01:intron 35.0%
TGGTTGATCTTATCCAATGA+TGG - Chr3:34660296-34660315 MsG0380013299.01.T01:three_prime_UTR 35.0%
TGTGAGGGAAAAAGTGAAAA+TGG + Chr3:34662318-34662337 None:intergenic 35.0%
TGTGTGTGTTAAAGCCTAAA+GGG + Chr3:34664989-34665008 None:intergenic 35.0%
TGTTACGCAAGACTAATTGT+GGG - Chr3:34667286-34667305 MsG0380013299.01.T01:intron 35.0%
TTATCCAAATTCTCGCAAAG+TGG - Chr3:34660936-34660955 MsG0380013299.01.T01:intron 35.0%
TTCAATTGCATGGAATTGTG+AGG + Chr3:34662334-34662353 None:intergenic 35.0%
TTCATATCTGATGTAGGAGT+TGG + Chr3:34668170-34668189 None:intergenic 35.0%
TTCCTATAGAACAATGTTGC+TGG + Chr3:34665327-34665346 None:intergenic 35.0%
TTCTTACCAAGAGAGATGAA+TGG - Chr3:34668239-34668258 MsG0380013299.01.T01:intron 35.0%
TTGATTACATACGATGAGCA+TGG - Chr3:34665582-34665601 MsG0380013299.01.T01:intron 35.0%
TTGCATAGAATGGTAGAAGA+CGG + Chr3:34660728-34660747 None:intergenic 35.0%
TTTCTTAACTTTATCGGGGT+TGG + Chr3:34668787-34668806 None:intergenic 35.0%
! ACAATGTTGCTGGGATATTT+TGG + Chr3:34665317-34665336 None:intergenic 35.0%
! ACGTCGTATAGGTGAAATTT+TGG + Chr3:34665372-34665391 None:intergenic 35.0%
! ACTAAAAAGTTGGTTAGAGG+TGG - Chr3:34663870-34663889 MsG0380013299.01.T01:intron 35.0%
! AGTAGTAGAGTGAGTTTTTC+GGG + Chr3:34662270-34662289 None:intergenic 35.0%
! ATTTGGTAACTTTCCTTCCT+TGG + Chr3:34665412-34665431 None:intergenic 35.0%
! CATCTCATCTAAGCGTTTTT+GGG + Chr3:34662830-34662849 None:intergenic 35.0%
! CTCCTATCAAAGTTTTACAC+GGG - Chr3:34660629-34660648 MsG0380013299.01.T01:CDS 35.0%
! CTTTTACCTTTCATATGCTC+CGG - Chr3:34667612-34667631 MsG0380013299.01.T01:intron 35.0%
! GACAATGTTGATGGAAGAAA+AGG + Chr3:34662212-34662231 None:intergenic 35.0%
! GACTCAGCCAATTTTATGAT+GGG + Chr3:34666562-34666581 None:intergenic 35.0%
! GAGTATTGTGGGATTTAAGT+GGG + Chr3:34662934-34662953 None:intergenic 35.0%
! GAGTGGGACCATATATTTTT+GGG - Chr3:34667135-34667154 MsG0380013299.01.T01:intron 35.0%
! GATTAATCTCTCGAGTATTG+TGG + Chr3:34662946-34662965 None:intergenic 35.0%
! GGACAATTTTCTACTTGATG+GGG - Chr3:34667505-34667524 MsG0380013299.01.T01:intron 35.0%
! GGTACTAAAAAGTTGGTTAG+AGG - Chr3:34663867-34663886 MsG0380013299.01.T01:intron 35.0%
! TAATTGAGCTGATTCTAACC+CGG + Chr3:34662454-34662473 None:intergenic 35.0%
! TCTAAAGTCAGACACATGAT+TGG + Chr3:34668589-34668608 None:intergenic 35.0%
! TGGATTAGATAACCCATCAT+TGG + Chr3:34660312-34660331 None:intergenic 35.0%
! TTAGTACCACTCATCTTTTC+TGG + Chr3:34663855-34663874 None:intergenic 35.0%
!! CATGATAATGGATTCGACTT+TGG - Chr3:34665282-34665301 MsG0380013299.01.T01:intron 35.0%
!! TCTTCGCTGATTCTTGATAT+CGG - Chr3:34668740-34668759 MsG0380013299.01.T01:intron 35.0%
!! TGAAATCCAATTTGGTGCAA+TGG + Chr3:34666986-34667005 None:intergenic 35.0%
!! TTGAAGGTATTGTCCAAACA+AGG - Chr3:34668272-34668291 MsG0380013299.01.T01:intron 35.0%
!! TTTTAATAGGTTGGGAGTGA+GGG - Chr3:34665688-34665707 MsG0380013299.01.T01:intron 35.0%
!!! CTGAGTTTGCTGTTTTTGAT+AGG - Chr3:34662720-34662739 MsG0380013299.01.T01:intron 35.0%
!!! CTGTTTGGTATTGATTTTGG+GGG - Chr3:34661314-34661333 MsG0380013299.01.T01:intron 35.0%
!!! GAGGTATATTTTTTAGGCCT+AGG - Chr3:34661626-34661645 MsG0380013299.01.T01:intron 35.0%
!!! GCTGTTTGGTATTGATTTTG+GGG - Chr3:34661313-34661332 MsG0380013299.01.T01:intron 35.0%
!!! TGTTTGGTATTGATTTTGGG+GGG - Chr3:34661315-34661334 MsG0380013299.01.T01:intron 35.0%
!!! TTTGTGTCGGTTTTAGGTTT+CGG - Chr3:34660912-34660931 MsG0380013299.01.T01:intron 35.0%
AAATGCGTTCTCCATCATCA+AGG + Chr3:34661709-34661728 None:intergenic 40.0%
AAGAGAACAGTAGGAACAGT+GGG + Chr3:34660428-34660447 None:intergenic 40.0%
AAGGGAACAAATATTCGGGT+CGG - Chr3:34662561-34662580 MsG0380013299.01.T01:intron 40.0%
AATACATGCCGGCACAAATT+AGG - Chr3:34664845-34664864 MsG0380013299.01.T01:intron 40.0%
AATCCATTCCCTACACTAGA+TGG - Chr3:34661802-34661821 MsG0380013299.01.T01:intron 40.0%
ACATGGATGAAGCAGTTAAG+AGG - Chr3:34668950-34668969 MsG0380013299.01.T01:intron 40.0%
ACTGGCAACATATCAATGGT+CGG + Chr3:34667218-34667237 None:intergenic 40.0%
AGAAGGGAGAGAATGTGATT+AGG + Chr3:34662061-34662080 None:intergenic 40.0%
AGGACAAATGTTCGTTAAGG+AGG - Chr3:34665512-34665531 MsG0380013299.01.T01:intron 40.0%
AGTTCACCAGAAAAGATGAG+TGG - Chr3:34663846-34663865 MsG0380013299.01.T01:intron 40.0%
ATCCATTCCCTACACTAGAT+GGG - Chr3:34661803-34661822 MsG0380013299.01.T01:intron 40.0%
ATTACATACGATGAGCATGG+AGG - Chr3:34665585-34665604 MsG0380013299.01.T01:intron 40.0%
CAAACATAAACGGTGTAACC+GGG - Chr3:34662433-34662452 MsG0380013299.01.T01:intron 40.0%
CAAAGTGTAGGTCGAACTTA+TGG + Chr3:34667753-34667772 None:intergenic 40.0%
CAAGAACGAAGCTAAGTATG+TGG - Chr3:34662507-34662526 MsG0380013299.01.T01:intron 40.0%
CAAGGTGATATAGCAATGGT+AGG + Chr3:34665716-34665735 None:intergenic 40.0%
CACTTCGCAATATAGACCTA+TGG + Chr3:34660867-34660886 None:intergenic 40.0%
CATAGAAGTGAGCAATAACC+TGG + Chr3:34668319-34668338 None:intergenic 40.0%
CATAGATGACTCGATGAATC+CGG + Chr3:34661097-34661116 None:intergenic 40.0%
CATAGGTCTATATTGCGAAG+TGG - Chr3:34660865-34660884 MsG0380013299.01.T01:intron 40.0%
CCAAAAACGCTTAGATGAGA+TGG - Chr3:34662828-34662847 MsG0380013299.01.T01:intron 40.0%
CCAAACATAAACGGTGTAAC+CGG - Chr3:34662432-34662451 MsG0380013299.01.T01:intron 40.0%
CCCATTAAAAACCCTAAGTC+CGG + Chr3:34667634-34667653 None:intergenic 40.0%
CGGTTACACCGTTTATGTTT+GGG + Chr3:34662434-34662453 None:intergenic 40.0%
CTACCATTGCTATATCACCT+TGG - Chr3:34665714-34665733 MsG0380013299.01.T01:intron 40.0%
CTATAAACAGCAACATGGTC+TGG + Chr3:34662690-34662709 None:intergenic 40.0%
GACGATCTTGTAGTCAAAGA+AGG + Chr3:34669042-34669061 None:intergenic 40.0%
GATGAGAACATTGGCAAACT+GGG + Chr3:34660349-34660368 None:intergenic 40.0%
GCAAACTTCTAGTCGAGATT+TGG - Chr3:34667577-34667596 MsG0380013299.01.T01:intron 40.0%
GCTCAACAAGGCTTATTCAA+TGG - Chr3:34662622-34662641 MsG0380013299.01.T01:intron 40.0%
GCTTAAATGTCACGTCGTAT+AGG + Chr3:34665383-34665402 None:intergenic 40.0%
GCTTTAACACACACATTCAC+AGG - Chr3:34664994-34665013 MsG0380013299.01.T01:intron 40.0%
GGGTTATCTAATCCAATGAC+TGG - Chr3:34660317-34660336 MsG0380013299.01.T01:three_prime_UTR 40.0%
GTCACTCGTTTCAAGCAATA+AGG - Chr3:34662542-34662561 MsG0380013299.01.T01:intron 40.0%
GTGTTACGCAAGACTAATTG+TGG - Chr3:34667285-34667304 MsG0380013299.01.T01:intron 40.0%
GTTGAGCAAATCCATTCCAT+TGG + Chr3:34662609-34662628 None:intergenic 40.0%
GTTGCTTCCATACTATACCA+AGG - Chr3:34661955-34661974 MsG0380013299.01.T01:intron 40.0%
TAAGAGAACAGTAGGAACAG+TGG + Chr3:34660429-34660448 None:intergenic 40.0%
TAAGTATGTGGATCCTGATC+CGG - Chr3:34662519-34662538 MsG0380013299.01.T01:intron 40.0%
TACACCACTTTGCGAGAATT+TGG + Chr3:34660943-34660962 None:intergenic 40.0%
TACTTGATGGGGAAACTTCT+CGG - Chr3:34667516-34667535 MsG0380013299.01.T01:intron 40.0%
TCCCAGCAACATTGTTCTAT+AGG - Chr3:34665322-34665341 MsG0380013299.01.T01:intron 40.0%
TCGAACTTATGGTCCATGAT+GGG + Chr3:34667742-34667761 None:intergenic 40.0%
TCTATATTGCGAAGTGGTGT+CGG - Chr3:34660871-34660890 MsG0380013299.01.T01:intron 40.0%
TGAAAATGTTGTCATGCACC+AGG - Chr3:34667189-34667208 MsG0380013299.01.T01:intron 40.0%
TGATGAGAACATTGGCAAAC+TGG + Chr3:34660350-34660369 None:intergenic 40.0%
TGATTGGGAGAAATCTGCAA+GGG - Chr3:34661212-34661231 MsG0380013299.01.T01:CDS 40.0%
TGCTCCACCACAACATAATT+TGG + Chr3:34665429-34665448 None:intergenic 40.0%
TGGAGATTGGAAAGAAAGGA+GGG - Chr3:34661356-34661375 MsG0380013299.01.T01:intron 40.0%
TGTCTCTTGGATTATTGGGT+TGG - Chr3:34667427-34667446 MsG0380013299.01.T01:intron 40.0%
TTGATTGGGAGAAATCTGCA+AGG - Chr3:34661211-34661230 MsG0380013299.01.T01:CDS 40.0%
TTTCATATGCTCCGGACTTA+GGG - Chr3:34667620-34667639 MsG0380013299.01.T01:intron 40.0%
TTTGGGGGGAATTTATCATC+TGG - Chr3:34661329-34661348 MsG0380013299.01.T01:intron 40.0%
! AAGTATGTAGTGATGGGAGT+GGG - Chr3:34667119-34667138 MsG0380013299.01.T01:intron 40.0%
! ACGTGGCAACAGTATCTTTT+TGG + Chr3:34663252-34663271 None:intergenic 40.0%
! CATGTGTCTGACTTTAGAAG+TGG - Chr3:34668591-34668610 MsG0380013299.01.T01:intron 40.0%
! CCATCTCATCTAAGCGTTTT+TGG + Chr3:34662831-34662850 None:intergenic 40.0%
! CCGGACTTAGGGTTTTTAAT+GGG - Chr3:34667631-34667650 MsG0380013299.01.T01:intron 40.0%
! CGACTCAGCCAATTTTATGA+TGG + Chr3:34666563-34666582 None:intergenic 40.0%
! CGAGTATTGTGGGATTTAAG+TGG + Chr3:34662935-34662954 None:intergenic 40.0%
! CGGACTTAGGGTTTTTAATG+GGG - Chr3:34667632-34667651 MsG0380013299.01.T01:intron 40.0%
! CTTTTTAACCGTTGCTGCAA+TGG + Chr3:34668200-34668219 None:intergenic 40.0%
! GATTGGTTGATCTTATCCGT+TGG - Chr3:34660276-34660295 MsG0380013299.01.T01:three_prime_UTR 40.0%
! GGAATGGATTCTCTCAAATG+TGG + Chr3:34661792-34661811 None:intergenic 40.0%
! GGAGTGGGACCATATATTTT+TGG - Chr3:34667134-34667153 MsG0380013299.01.T01:intron 40.0%
! TAAGTATGTAGTGATGGGAG+TGG - Chr3:34667118-34667137 MsG0380013299.01.T01:intron 40.0%
! TCCGGACTTAGGGTTTTTAA+TGG - Chr3:34667630-34667649 MsG0380013299.01.T01:intron 40.0%
! TGGAATGGATTTGCTCAACA+AGG - Chr3:34662610-34662629 MsG0380013299.01.T01:intron 40.0%
! TGTTGATGGAAGAAAAGGTG+AGG + Chr3:34662207-34662226 None:intergenic 40.0%
! TTTTTCCGCGGTGAGAAAAA+CGG + Chr3:34662999-34663018 None:intergenic 40.0%
!! AATAACCGTTTTTCTCACCG+CGG - Chr3:34662991-34663010 MsG0380013299.01.T01:intron 40.0%
!! CTTTTAATAGGTTGGGAGTG+AGG - Chr3:34665687-34665706 MsG0380013299.01.T01:intron 40.0%
!! GTTAAGAGGTTCTTTGAAGC+AGG - Chr3:34668964-34668983 MsG0380013299.01.T01:intron 40.0%
!! TAAGTGTTGCACTTGCTGTT+TGG - Chr3:34661299-34661318 MsG0380013299.01.T01:intron 40.0%
!!! AGTTTTTCGGGTACCCATTT+TGG + Chr3:34662258-34662277 None:intergenic 40.0%
!!! TTCTTTTGGCTTCACACGTA+GGG - Chr3:34667007-34667026 MsG0380013299.01.T01:intron 40.0%
AAACAGCGGTGGCATATTTG+TGG - Chr3:34661163-34661182 MsG0380013299.01.T01:CDS 45.0%
AACAGTAGGAACAGTGGCTA+TGG + Chr3:34660609-34660628 None:intergenic 45.0%
AACAGTAGGAACAGTGGGTA+TGG + Chr3:34660423-34660442 None:intergenic 45.0%
AACTTTCCTTCCTTGGCATG+AGG + Chr3:34665405-34665424 None:intergenic 45.0%
AAGTATGTGGATCCTGATCC+GGG - Chr3:34662520-34662539 MsG0380013299.01.T01:intron 45.0%
AAGTGTCCCCATCTAGTGTA+GGG + Chr3:34661813-34661832 None:intergenic 45.0%
AATAGGGTTTCGTTCCACTG+TGG + Chr3:34665561-34665580 None:intergenic 45.0%
ACACTCATCCATTGCAGCAA+CGG - Chr3:34668189-34668208 MsG0380013299.01.T01:intron 45.0%
ACGAAAACTGAGATGGTCGA+CGG - Chr3:34661124-34661143 MsG0380013299.01.T01:intron 45.0%
ATAACCTGGGCAATCAGTTC+TGG + Chr3:34668305-34668324 None:intergenic 45.0%
ATAGGGTTTCGTTCCACTGT+GGG + Chr3:34665560-34665579 None:intergenic 45.0%
ATTCTCGCAAAGTGGTGTAG+TGG - Chr3:34660944-34660963 MsG0380013299.01.T01:intron 45.0%
ATTGCTTGAAACGAGTGACC+CGG + Chr3:34662541-34662560 None:intergenic 45.0%
CAAATCCATTCCATTGGAGC+CGG + Chr3:34662603-34662622 None:intergenic 45.0%
CAACTTGCAGCAGTGCTAAA+AGG - Chr3:34668859-34668878 MsG0380013299.01.T01:intron 45.0%
CACGTAGAGTCGATTAGGTT+GGG + Chr3:34665177-34665196 None:intergenic 45.0%
CACTCACCATTGCACCAAAT+TGG - Chr3:34666977-34666996 MsG0380013299.01.T01:intron 45.0%
CATCGAGTCATCTATGATGG+CGG - Chr3:34661101-34661120 MsG0380013299.01.T01:intron 45.0%
CCAAGCATGTGTCGAATGAA+CGG + Chr3:34662393-34662412 None:intergenic 45.0%
CCAGCAGCGTTAAAACTCTT+AGG - Chr3:34662896-34662915 MsG0380013299.01.T01:intron 45.0%
CCGAAAAAAAAAGCTCGGGT+GGG + Chr3:34661052-34661071 None:intergenic 45.0%
CCGGTTACACCGTTTATGTT+TGG + Chr3:34662435-34662454 None:intergenic 45.0%
CCTTGATACACATCATGCGA+CGG + Chr3:34665495-34665514 None:intergenic 45.0%
CGAGGTATGTGTCATGTATC+CGG + Chr3:34668352-34668371 None:intergenic 45.0%
CGGAGCCGAAAAAAAAAGCT+CGG + Chr3:34661057-34661076 None:intergenic 45.0%
CTAAGTCCGGAGCATATGAA+AGG + Chr3:34667621-34667640 None:intergenic 45.0%
CTTGATACACATCATGCGAC+GGG + Chr3:34665494-34665513 None:intergenic 45.0%
CTTTCATATGCTCCGGACTT+AGG - Chr3:34667619-34667638 MsG0380013299.01.T01:intron 45.0%
GACATTTAAGCCTCATGCCA+AGG - Chr3:34665392-34665411 MsG0380013299.01.T01:intron 45.0%
GCTGATATGCCCAAGAATAC+TGG + Chr3:34667236-34667255 None:intergenic 45.0%
GGAATTTATCATCTGGTGGG+TGG - Chr3:34661336-34661355 MsG0380013299.01.T01:intron 45.0%
GGAGCCGAAAAAAAAAGCTC+GGG + Chr3:34661056-34661075 None:intergenic 45.0%
GGCAGGTAACAACTTAGTGT+CGG + Chr3:34665460-34665479 None:intergenic 45.0%
GGGGGAATTTATCATCTGGT+GGG - Chr3:34661333-34661352 MsG0380013299.01.T01:intron 45.0%
GTCGAACTTATGGTCCATGA+TGG + Chr3:34667743-34667762 None:intergenic 45.0%
GTGGAGATTGGAAAGAAAGG+AGG - Chr3:34661355-34661374 MsG0380013299.01.T01:intron 45.0%
TAACCTGGGCAATCAGTTCT+GGG + Chr3:34668304-34668323 None:intergenic 45.0%
TAGATAGTGCTAAACAGCGG+TGG - Chr3:34661152-34661171 MsG0380013299.01.T01:CDS 45.0%
TAGGAGAACAGTAGGAACAG+TGG + Chr3:34660615-34660634 None:intergenic 45.0%
TCAACGGATAAACCTAGCCA+GGG - Chr3:34660759-34660778 MsG0380013299.01.T01:intron 45.0%
TCATTCGACACATGCTTGGT+TGG - Chr3:34662394-34662413 MsG0380013299.01.T01:intron 45.0%
TCCATTCCCTACACTAGATG+GGG - Chr3:34661804-34661823 MsG0380013299.01.T01:intron 45.0%
TGAGTTGCACTCCTTGATGA+TGG - Chr3:34661695-34661714 MsG0380013299.01.T01:intron 45.0%
TGGGTGGAGATTGGAAAGAA+AGG - Chr3:34661352-34661371 MsG0380013299.01.T01:intron 45.0%
TTTAAGCCTCATGCCAAGGA+AGG - Chr3:34665396-34665415 MsG0380013299.01.T01:intron 45.0%
! AACTTATGGTCCATGATGGG+TGG + Chr3:34667739-34667758 None:intergenic 45.0%
! ATTATGTTGTGGTGGAGCAG+CGG - Chr3:34665430-34665449 MsG0380013299.01.T01:intron 45.0%
! CATATCAATGGTCGGTTTCC+TGG + Chr3:34667210-34667229 None:intergenic 45.0%
! CGCATTGACACTATCAGCTT+CGG + Chr3:34667400-34667419 None:intergenic 45.0%
! CTTTTAGCACTGCTGCAAGT+TGG + Chr3:34668861-34668880 None:intergenic 45.0%
! TAATCGACTCTACGTGCACT+CGG - Chr3:34665181-34665200 MsG0380013299.01.T01:intron 45.0%
!! CCTAAGAGTTTTAACGCTGC+TGG + Chr3:34662899-34662918 None:intergenic 45.0%
!! GAATGGGCTGGAACATTTGA+AGG - Chr3:34668256-34668275 MsG0380013299.01.T01:intron 45.0%
!! GCATATTTGTGGTGTTGGTG+AGG - Chr3:34661174-34661193 MsG0380013299.01.T01:CDS 45.0%
!!! CCCACCCGAGCTTTTTTTTT+CGG - Chr3:34661049-34661068 MsG0380013299.01.T01:intron 45.0%
!!! CTTCTTTTGGCTTCACACGT+AGG - Chr3:34667006-34667025 MsG0380013299.01.T01:intron 45.0%
!! AATTAAAATTAAAAAATTGA+GGG + Chr3:34664572-34664591 None:intergenic 5.0%
!! TAATAAAAATTATTGAAAAT+AGG - Chr3:34669156-34669175 MsG0380013299.01.T01:CDS 5.0%
!! TAATTAAAATTAAAAAATTG+AGG + Chr3:34664573-34664592 None:intergenic 5.0%
!! TTAAAAAAATAATAATCAAA+AGG + Chr3:34663067-34663086 None:intergenic 5.0%
!!! ACTTTTTTTATTTTTTTTTT+AGG + Chr3:34664815-34664834 None:intergenic 5.0%
!!! TGATATAATTTTAATATATT+TGG + Chr3:34663939-34663958 None:intergenic 5.0%
ACCAAGAGAGATGAATGGGC+TGG - Chr3:34668244-34668263 MsG0380013299.01.T01:intron 50.0%
ACTGGGTGATCTCCAGTCAT+TGG + Chr3:34660332-34660351 None:intergenic 50.0%
ACTTCTATGCACGACAGCAC+CGG - Chr3:34668330-34668349 MsG0380013299.01.T01:intron 50.0%
ATGCGACGGGTGATCATCAT+TGG + Chr3:34665481-34665500 None:intergenic 50.0%
CAAGCCCTGATGGGATTGTA+GGG - Chr3:34665645-34665664 MsG0380013299.01.T01:intron 50.0%
CAAGTGTCCCCATCTAGTGT+AGG + Chr3:34661814-34661833 None:intergenic 50.0%
CCGTCGCATGATGTGTATCA+AGG - Chr3:34665492-34665511 MsG0380013299.01.T01:intron 50.0%
CCGTTCATTCGACACATGCT+TGG - Chr3:34662390-34662409 MsG0380013299.01.T01:intron 50.0%
CGGTGGCATATTTGTGGTGT+TGG - Chr3:34661169-34661188 MsG0380013299.01.T01:CDS 50.0%
GAGTGCACGTAGAGTCGATT+AGG + Chr3:34665182-34665201 None:intergenic 50.0%
GCACGTAGAGTCGATTAGGT+TGG + Chr3:34665178-34665197 None:intergenic 50.0%
GCCGAAAAAAAAAGCTCGGG+TGG + Chr3:34661053-34661072 None:intergenic 50.0%
GGAACAAATATTCGGGTCGG+AGG - Chr3:34662564-34662583 MsG0380013299.01.T01:intron 50.0%
GGGGGGAATTTATCATCTGG+TGG - Chr3:34661332-34661351 MsG0380013299.01.T01:intron 50.0%
GTCAACGGATAAACCTAGCC+AGG - Chr3:34660758-34660777 MsG0380013299.01.T01:intron 50.0%
GTGTCAGACACGACATGTGT+CGG - Chr3:34668431-34668450 MsG0380013299.01.T01:intron 50.0%
TATGTGTGGCTGTGTGAACG+TGG + Chr3:34663269-34663288 None:intergenic 50.0%
TCCAGCCCATTCATCTCTCT+TGG + Chr3:34668248-34668267 None:intergenic 50.0%
TCCCCATCTAGTGTAGGGAA+TGG + Chr3:34661808-34661827 None:intergenic 50.0%
TCGATGAATCCGGTAACCAC+CGG + Chr3:34661087-34661106 None:intergenic 50.0%
TTCTGGGCTCTGTCCTTGTT+TGG + Chr3:34668288-34668307 None:intergenic 50.0%
TTGGGAGAAATCTGCAAGGG+TGG - Chr3:34661215-34661234 MsG0380013299.01.T01:CDS 50.0%
! ACCTTGGATTGAAAGGGCAC+CGG - Chr3:34665730-34665749 MsG0380013299.01.T01:intron 50.0%
! ATCATCTGGTGGGTGGAGAT+TGG - Chr3:34661343-34661362 MsG0380013299.01.T01:intron 50.0%
!! ATGGCGGACGAAAACTGAGA+TGG - Chr3:34661117-34661136 MsG0380013299.01.T01:intron 50.0%
!! CACAAGTGTCGGTATCGTGT+CGG - Chr3:34668409-34668428 MsG0380013299.01.T01:intron 50.0%
!! GTAGAGTCGATTAGGTTGGG+TGG + Chr3:34665174-34665193 None:intergenic 50.0%
!! TCCATGATGGGTGGTACCTA+GGG + Chr3:34667730-34667749 None:intergenic 50.0%
!!! TTTTTTTTCGGCTCCGCCAC+TGG - Chr3:34661061-34661080 MsG0380013299.01.T01:intron 50.0%
ACACGACATGTGTCGGACAC+TGG - Chr3:34668438-34668457 MsG0380013299.01.T01:intron 55.0%
ACCCTAGGTACCACCCATCA+TGG - Chr3:34667726-34667745 MsG0380013299.01.T01:intron 55.0%
ACCGGTGCCCTTTCAATCCA+AGG + Chr3:34665734-34665753 None:intergenic 55.0%
ATGTTGCTACGCCTGTGCGT+GGG - Chr3:34665618-34665637 MsG0380013299.01.T01:intron 55.0%
CACGACATGTGTCGGACACT+GGG - Chr3:34668439-34668458 MsG0380013299.01.T01:intron 55.0%
CAGTTGTTCATGGGCCCAAC+GGG - Chr3:34668141-34668160 MsG0380013299.01.T01:intron 55.0%
CCAAGCCCTGATGGGATTGT+AGG - Chr3:34665644-34665663 MsG0380013299.01.T01:intron 55.0%
CCTACAATCCCATCAGGGCT+TGG + Chr3:34665647-34665666 None:intergenic 55.0%
CCTTTGCAAGCAGGGATGCT+AGG + Chr3:34665231-34665250 None:intergenic 55.0%
CTGGCCCTACAATCCCATCA+GGG + Chr3:34665652-34665671 None:intergenic 55.0%
GACGGGTGATCATCATTGGC+AGG + Chr3:34665477-34665496 None:intergenic 55.0%
GCAGTTGTTCATGGGCCCAA+CGG - Chr3:34668140-34668159 MsG0380013299.01.T01:intron 55.0%
TCTGGCCCTACAATCCCATC+AGG + Chr3:34665653-34665672 None:intergenic 55.0%
TGAAACGAGTGACCCGGATC+AGG + Chr3:34662535-34662554 None:intergenic 55.0%
TGGGTAGCCCTTTGCAAGCA+GGG + Chr3:34665239-34665258 None:intergenic 55.0%
! CTTGACCGGCTCCAATGGAA+TGG - Chr3:34662595-34662614 MsG0380013299.01.T01:intron 55.0%
!! CGATTAGGTTGGGTGGAAGC+TGG + Chr3:34665167-34665186 None:intergenic 55.0%
!! GTAGGAGTTGGTGACCCGTT+GGG + Chr3:34668158-34668177 None:intergenic 55.0%
!! GTCCATGATGGGTGGTACCT+AGG + Chr3:34667731-34667750 None:intergenic 55.0%
!! TGTAGGAGTTGGTGACCCGT+TGG + Chr3:34668159-34668178 None:intergenic 55.0%
!!! AATTTTTCCGGGGTGGGCTG+TGG + Chr3:34660831-34660850 None:intergenic 55.0%
AGGTTGGGTGGAAGCTGGCA+CGG + Chr3:34665162-34665181 None:intergenic 60.0%
CATGTTGCTACGCCTGTGCG+TGG - Chr3:34665617-34665636 MsG0380013299.01.T01:intron 60.0%
CGGAGGACACGTCACTTGAC+CGG - Chr3:34662581-34662600 MsG0380013299.01.T01:intron 60.0%
GAGCCCAGAACTGATTGCCC+AGG - Chr3:34668298-34668317 MsG0380013299.01.T01:intron 60.0%
GTGGGTAGCCCTTTGCAAGC+AGG + Chr3:34665240-34665259 None:intergenic 60.0%
TAAACCTAGCCAGGGCTCGC+CGG - Chr3:34660767-34660786 MsG0380013299.01.T01:intron 60.0%
TGTTGCTACGCCTGTGCGTG+GGG - Chr3:34665619-34665638 MsG0380013299.01.T01:intron 60.0%
! AGGAGGTGTACGAGACGCTG+AGG - Chr3:34665529-34665548 MsG0380013299.01.T01:intron 60.0%
! CGTCACTTGACCGGCTCCAA+TGG - Chr3:34662590-34662609 MsG0380013299.01.T01:intron 60.0%
! GGAGGTGTACGAGACGCTGA+GGG - Chr3:34665530-34665549 MsG0380013299.01.T01:intron 60.0%
ATCCGGTAACCACCGGCCAG+TGG + Chr3:34661080-34661099 None:intergenic 65.0%
CCACCGCCCTAGCCCATGAA+GGG + Chr3:34660807-34660826 None:intergenic 65.0%
CGTGCACTCGGCAACATCCG+CGG - Chr3:34665193-34665212 MsG0380013299.01.T01:intron 65.0%
! GCAGTGGCGGAGCCCTTCAT+GGG - Chr3:34660792-34660811 MsG0380013299.01.T01:intron 65.0%
! GCGGAGCCCTTCATGGGCTA+GGG - Chr3:34660798-34660817 MsG0380013299.01.T01:intron 65.0%
! GTGGGGTGCCAAGCCCTGAT+GGG - Chr3:34665636-34665655 MsG0380013299.01.T01:intron 65.0%
! TTTTCGGCTCCGCCACTGGC+CGG - Chr3:34661065-34661084 MsG0380013299.01.T01:intron 65.0%
!! CCTTCATGGGCTAGGGCGGT+GGG - Chr3:34660805-34660824 MsG0380013299.01.T01:intron 65.0%
!! GAGCCCTTCATGGGCTAGGG+CGG - Chr3:34660801-34660820 MsG0380013299.01.T01:intron 65.0%
AAGGGCTCCGCCACTGCCAC+CGG + Chr3:34660789-34660808 None:intergenic 70.0%
CCCACCGCCCTAGCCCATGA+AGG + Chr3:34660808-34660827 None:intergenic 70.0%
CGCCACTGGCCGGTGGTTAC+CGG - Chr3:34661075-34661094 MsG0380013299.01.T01:intron 70.0%
CGGTAACCACCGGCCAGTGG+CGG + Chr3:34661077-34661096 None:intergenic 70.0%
GGCGGAGCCCTTCATGGGCT+AGG - Chr3:34660797-34660816 MsG0380013299.01.T01:intron 70.0%
TCTGCAGTTGCGCGCGACGC+CGG - Chr3:34662966-34662985 MsG0380013299.01.T01:intron 70.0%
! CGTGGGGTGCCAAGCCCTGA+TGG - Chr3:34665635-34665654 MsG0380013299.01.T01:intron 70.0%
! GGCAGTGGCGGAGCCCTTCA+TGG - Chr3:34660791-34660810 MsG0380013299.01.T01:intron 70.0%
!! CCCTTCATGGGCTAGGGCGG+TGG - Chr3:34660804-34660823 MsG0380013299.01.T01:intron 70.0%
ACCTAGCCAGGGCTCGCCGG+TGG - Chr3:34660770-34660789 MsG0380013299.01.T01:intron 75.0%
CGCTGAGGGCGAGCCCACAG+TGG - Chr3:34665544-34665563 MsG0380013299.01.T01:intron 75.0%
GGGCTTGGCACCCCACGCAC+AGG + Chr3:34665632-34665651 None:intergenic 75.0%
! CCACTGCCACCGGCGAGCCC+TGG + Chr3:34660779-34660798 None:intergenic 80.0%
! CCAGGGCTCGCCGGTGGCAG+TGG - Chr3:34660776-34660795 MsG0380013299.01.T01:intron 80.0%
! CGGTGGGCCACAGCCCACCC+CGG - Chr3:34660821-34660840 MsG0380013299.01.T01:intron 80.0%
! GCCACCGGCGAGCCCTGGCT+AGG + Chr3:34660774-34660793 None:intergenic 80.0%
! GGGCTCGCCGGTGGCAGTGG+CGG - Chr3:34660779-34660798 MsG0380013299.01.T01:intron 80.0%
! TCGGCTCCGCCACTGGCCGG+TGG - Chr3:34661068-34661087 MsG0380013299.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 34660230 34669231 34660230 ID=MsG0380013299.01;Name=MsG0380013299.01
Chr3 mRNA 34660230 34669231 34660230 ID=MsG0380013299.01.T01;Parent=MsG0380013299.01;Name=MsG0380013299.01.T01;_AED=0.46;_eAED=0.50;_QI=0|0.16|0.28|0.85|1|1|7|145|338
Chr3 exon 34669112 34669231 34669112 ID=MsG0380013299.01.T01:exon:5084;Parent=MsG0380013299.01.T01
Chr3 exon 34664233 34664312 34664233 ID=MsG0380013299.01.T01:exon:5085;Parent=MsG0380013299.01.T01
Chr3 exon 34663926 34664117 34663926 ID=MsG0380013299.01.T01:exon:5086;Parent=MsG0380013299.01.T01
Chr3 exon 34663710 34663764 34663710 ID=MsG0380013299.01.T01:exon:5087;Parent=MsG0380013299.01.T01
Chr3 exon 34662003 34662085 34662003 ID=MsG0380013299.01.T01:exon:5088;Parent=MsG0380013299.01.T01
Chr3 exon 34661142 34661317 34661142 ID=MsG0380013299.01.T01:exon:5089;Parent=MsG0380013299.01.T01
Chr3 exon 34660230 34660685 34660230 ID=MsG0380013299.01.T01:exon:5090;Parent=MsG0380013299.01.T01
Chr3 CDS 34669112 34669231 34669112 ID=MsG0380013299.01.T01:cds;Parent=MsG0380013299.01.T01
Chr3 CDS 34664233 34664312 34664233 ID=MsG0380013299.01.T01:cds;Parent=MsG0380013299.01.T01
Chr3 CDS 34663926 34664117 34663926 ID=MsG0380013299.01.T01:cds;Parent=MsG0380013299.01.T01
Chr3 CDS 34663710 34663764 34663710 ID=MsG0380013299.01.T01:cds;Parent=MsG0380013299.01.T01
Chr3 CDS 34662003 34662085 34662003 ID=MsG0380013299.01.T01:cds;Parent=MsG0380013299.01.T01
Chr3 CDS 34661142 34661317 34661142 ID=MsG0380013299.01.T01:cds;Parent=MsG0380013299.01.T01
Chr3 CDS 34660375 34660685 34660375 ID=MsG0380013299.01.T01:cds;Parent=MsG0380013299.01.T01
Chr3 three_prime_UTR 34660230 34660374 34660230 ID=MsG0380013299.01.T01:three_prime_utr;Parent=MsG0380013299.01.T01
Gene Sequence

>MsG0380013299.01.T01

ATGAATGGATTGGATGATGATATTATAAAGGATTTGTTTATAATAGGATTGGTTGATCTTATCCGTTGGTTGATCTTATCCAATGATGGGTTATCTAATCCAATGACTGGAGATCACCCAGTGGTTGCTTCCGTGCCAGCTTCCACCCAACCTAATCGACTCTACGTGCACTCGGCAACATCCGCGGCGCCACCAGTAACGAACTTAAGGAAGCTAAAGTACGTGCCAAAATTTCACCTATACGACGTGACATTTAAGCCTCATGCCAAGGAAGGAAAGTTACCAAATTATGTTGTGGTGGAGCAGCGGTACACCGACACTAAGTTGTTACCTGCCAATGATGATCACCCGTCGCATGATGTGTATCAAGGACAAATGTTCGTTAAGGAGGTGTTGGGAGTGAGGGTTCCTACCATTGCTATATCACCTTGGATTGAAAGGGCACCGGTACAAATTAAGATAGGTATGCCGAAGCTGATAGTGTCAATGCGATACAAATGTCTCTTGGATTATTGGGTTGGTTTCTTATGTTGTTCATGGGCCCAACGGGTCACCAACTCCTACATCAGATATGAACACTCATCCATTGCAGCAACGGTTAAAAAGATCTTCAATTTACCTAAATTTCTTACCAAGAGAGATGAATGGGCTGGAACATTTGAAGGTATTGTCCAAACAAGGACAGAGCCCAGAACTGATTGCCCAGAACAGCTTCCAACCCCGATAAAGTTAAGAAAGGGAGAGGCAAATGAAGATGCAAAGCTAAGTGAATTTCAGCAGGAGATGATCCAACTTGCAGCAGTGCTAAAAGGAGACAATATCTTCACTAGTTATCCAAATACTATAGGGAAAGACATGAGTGTTAAGCAAGGAAAATATTACATGGATGAAGCAGTTAAGAGGTTCTTTGAAGCAGGTCGTTATGCAAAGAAAATGGGAGTTAGTGATGAAAATATAGTGAAGATGAAGCCTTCTTTGACTACAAGATCGTCCAAATCTTCAAACACAAAACCATAG
Protein sequence

>MsG0380013299.01.T01

MNGLDDDIIKDLFIIGLVDLIRWLILSNDGLSNPMTGDHPVVASVPASTQPNRLYVHSATSAAPPVTNLRKLKYVPKFHLYDVTFKPHAKEGKLPNYVVVEQRYTDTKLLPANDDHPSHDVYQGQMFVKEVLGVRVPTIAISPWIERAPVQIKIGMPKLIVSMRYKCLLDYWVGFLCCSWAQRVTNSYIRYEHSSIAATVKKIFNLPKFLTKRDEWAGTFEGIVQTRTEPRTDCPEQLPTPIKLRKGEANEDAKLSEFQQEMIQLAAVLKGDNIFTSYPNTIGKDMSVKQGKYYMDEAVKRFFEAGRYAKKMGVSDENIVKMKPSLTTRSSKSSNTKP*