AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014608.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014608.01.T01 AT3G13235 69.104 424 88 5 1 393 1 412 0.0 563
MsG0380014608.01.T01 AT3G13235 69.104 424 89 5 1 393 1 413 0.0 549
MsG0380014608.01.T01 AT3G13235 69.104 424 89 5 1 393 1 413 0.0 549

Find 78 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACTGATTGATTAATTTA+AGG 0.132692 3:-57145732 MsG0380014608.01.T01:three_prime_UTR
TGATGAACAAATTCTCAATT+TGG 0.163536 3:-57152901 MsG0380014608.01.T01:CDS
GTGCCGGCGCTGCTGCTTCT+AGG 0.184463 3:-57152311 MsG0380014608.01.T01:intron
TTTGATGGGTCAGCTCTTTC+AGG 0.190068 3:-57151131 MsG0380014608.01.T01:intron
TTTACAATTTGAAATGAAAT+TGG 0.233087 3:+57145790 None:intergenic
GGAGTTAGCACAAACTATTC+TGG 0.286483 3:-57150861 MsG0380014608.01.T01:CDS
AGAATTTGTTGTTGCTGAAT+AGG 0.289407 3:+57152426 None:intergenic
AGTTGGCCAAACCGAAATAT+TGG 0.313993 3:-57148949 MsG0380014608.01.T01:CDS
AAGACTGCGCTGAGCGTTTA+GGG 0.317965 3:-57149727 MsG0380014608.01.T01:intron
AAAGACTGCGCTGAGCGTTT+AGG 0.319453 3:-57149728 MsG0380014608.01.T01:CDS
TCCTGAGCTTGAAGCTTCCT+TGG 0.324897 3:+57148113 None:intergenic
ATGTATTCTACCCAATATTT+CGG 0.327416 3:+57148938 None:intergenic
AGAAAGGAATTGATGACAAT+TGG 0.327419 3:-57150100 MsG0380014608.01.T01:CDS
GACGCTGTAATTCACTTCTT+TGG 0.337096 3:+57150792 None:intergenic
TAGACGTGATTCTAATTTGA+TGG 0.344375 3:-57151146 MsG0380014608.01.T01:CDS
ACCACTCTTGCAAAAGCTTC+AGG 0.344900 3:+57150056 None:intergenic
CAGTGATCTTCATGTTGAAT+TGG 0.375666 3:+57152934 None:intergenic
TTTCAGGCATTTGTTGATAG+TGG 0.390062 3:-57149773 MsG0380014608.01.T01:intron
GACGCAGTCGTAAAATTTCC+TGG 0.390464 3:+57150819 None:intergenic
AGCTTCTGGTGACAAGTCTA+AGG 0.395209 3:-57147005 MsG0380014608.01.T01:intron
GAGTGGCCACATACCTTCAA+TGG 0.402063 3:+57149914 None:intergenic
TATGTTGACATGGAGGTTAA+TGG 0.402989 3:-57149941 MsG0380014608.01.T01:CDS
ACTCTTATATTACTTGTTGA+AGG 0.403807 3:+57153052 None:intergenic
CAACAACAAATTCTGTTCAA+TGG 0.412584 3:-57152417 MsG0380014608.01.T01:CDS
ACCGTCTCTGGCGCTGGTGC+CGG 0.413690 3:-57152327 MsG0380014608.01.T01:CDS
AACAACAAATTCTGTTCAAT+GGG 0.414137 3:-57152416 MsG0380014608.01.T01:CDS
ATATTACTTGTTGAAGGGGT+TGG 0.415633 3:+57153058 None:intergenic
TTCTACCCAATATTTCGGTT+TGG 0.425210 3:+57148943 None:intergenic
ATTGAGTGCACTTGGTGTTA+AGG 0.436866 3:-57152370 MsG0380014608.01.T01:CDS
ATGGTAAAGTGAAAGACTAT+TGG 0.438725 3:+57153007 None:intergenic
GACTGTAAATATCATCAATC+AGG 0.441717 3:+57145753 None:intergenic
ATGATTACATACAGATTCGT+TGG 0.450994 3:+57152869 None:intergenic
TTGCTAATGATGACCGTCTC+TGG 0.454720 3:-57152339 MsG0380014608.01.T01:CDS
CAAGCTCTTCAATTATTCAA+TGG 0.456598 3:-57145917 MsG0380014608.01.T01:CDS
GAAAGGAATTGATGACAATT+GGG 0.457835 3:-57150099 MsG0380014608.01.T01:CDS
GTTGGCCAAACCGAAATATT+GGG 0.457997 3:-57148948 MsG0380014608.01.T01:CDS
AGTATTGAAGCTCAAATCAT+TGG 0.461455 3:+57151210 None:intergenic
GGCAATGAGGAACAAGCAGC+TGG 0.464855 3:-57145896 MsG0380014608.01.T01:CDS
GAGTTAGCACAAACTATTCT+GGG 0.472629 3:-57150860 MsG0380014608.01.T01:CDS
CTCTTATATTACTTGTTGAA+GGG 0.474896 3:+57153053 None:intergenic
GTTATAGGTGGAAAACGTTA+AGG 0.478956 3:-57152776 MsG0380014608.01.T01:intron
TCCAAGGAAGCTTCAAGCTC+AGG 0.480693 3:-57148114 MsG0380014608.01.T01:CDS
AAGTGCTGCTGAAAAGCAGC+AGG 0.481742 3:+57151169 None:intergenic
TAAGGCATTACTTGAGGTTG+AGG 0.483758 3:-57152758 MsG0380014608.01.T01:intron
GATTTGAGCTTCAATACTGA+TGG 0.491036 3:-57151205 MsG0380014608.01.T01:CDS
GTTGCAAAGCTTGTTGAGCT+AGG 0.494961 3:-57145962 MsG0380014608.01.T01:CDS
AGACGTGATTCTAATTTGAT+GGG 0.503423 3:-57151145 MsG0380014608.01.T01:CDS
CTATTGGAAGACTTATAAGA+AGG 0.504019 3:+57153023 None:intergenic
GTTGAAGAACAAGAAGAGAG+AGG 0.505328 3:+57152972 None:intergenic
GGTTAATGGTGTACCATTGA+AGG 0.512062 3:-57149927 MsG0380014608.01.T01:intron
TGATTACATACAGATTCGTT+GGG 0.512819 3:+57152870 None:intergenic
AGTGATCTTCATGTTGAATT+GGG 0.515013 3:+57152935 None:intergenic
AGATCAGCGTTACAAAGGAA+TGG 0.515416 3:-57148979 MsG0380014608.01.T01:CDS
CAATGATCTCAATAAAATCC+AGG 0.523417 3:-57150837 MsG0380014608.01.T01:CDS
TCTTATATTACTTGTTGAAG+GGG 0.523717 3:+57153054 None:intergenic
AAAGTATACTTACTCGAAGT+GGG 0.528721 3:+57148088 None:intergenic
CGTTACAAAGGAATGGCTCA+TGG 0.532626 3:-57148972 MsG0380014608.01.T01:CDS
ATGAAACATACAGAATGATC+CGG 0.534028 3:-57150882 MsG0380014608.01.T01:intron
ATGATGACCGTCTCTGGCGC+TGG 0.534296 3:-57152333 MsG0380014608.01.T01:CDS
AAAGGAATGGCTCATGGAGT+TGG 0.535658 3:-57148966 MsG0380014608.01.T01:CDS
AAGCCTAACCAGCACTATCC+CGG 0.539540 3:+57147173 None:intergenic
TCTCAGAAATTGAGTGCACT+TGG 0.541253 3:-57152378 MsG0380014608.01.T01:CDS
TAAAGTATACTTACTCGAAG+TGG 0.542265 3:+57148087 None:intergenic
AATACATGTAGCTCCAATCA+AGG 0.544227 3:-57148922 MsG0380014608.01.T01:intron
GATTGAAGCTGCCATCCGCC+AGG 0.546391 3:-57150560 MsG0380014608.01.T01:intron
AATTCTGTTCAATGGGAATG+AGG 0.557744 3:-57152409 MsG0380014608.01.T01:CDS
AAACGTTAAGGCATTACTTG+AGG 0.564264 3:-57152764 MsG0380014608.01.T01:CDS
TCAATTATTCAATGGCAATG+AGG 0.566069 3:-57145909 MsG0380014608.01.T01:CDS
AGAGAGGTTTGCTTTATCGA+TGG 0.573022 3:+57152988 None:intergenic
AGATGAGGCAAAGTATTCCA+AGG 0.574003 3:-57148130 MsG0380014608.01.T01:CDS
GCCGGCACCAGCGCCAGAGA+CGG 0.575571 3:+57152326 None:intergenic
ATACCTAGAAGCAGCAGCGC+CGG 0.584021 3:+57152308 None:intergenic
AGAATAGTTTGTGCTAACTC+CGG 0.598629 3:+57150863 None:intergenic
GCAATGAGGAACAAGCAGCT+GGG 0.631351 3:-57145895 MsG0380014608.01.T01:CDS
GGTCATGTTGTATGTTGACA+TGG 0.635512 3:-57149951 MsG0380014608.01.T01:CDS
CAGAGAAAGACATACCATCC+CGG 0.647041 3:-57148158 MsG0380014608.01.T01:CDS
AGTGCTGCTGAAAAGCAGCA+GGG 0.682279 3:+57151170 None:intergenic
CATGTTGTATGTTGACATGG+AGG 0.717946 3:-57149948 MsG0380014608.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATATAATAAATCCT+TGG + Chr3:57152218-57152237 None:intergenic 10.0%
!! ACAATGTTTATAATATAATA+AGG + Chr3:57146894-57146913 None:intergenic 10.0%
!! ATAATATTATTACGTTTATT+AGG - Chr3:57149145-57149164 MsG0380014608.01.T01:intron 10.0%
!! CAAAAACAAATTTAATTATA+TGG + Chr3:57151691-57151710 None:intergenic 10.0%
!!! AAGGATTTATTATATTTTTT+TGG - Chr3:57152217-57152236 MsG0380014608.01.T01:intron 10.0%
!! AAAATTCAAACAAATTTATG+AGG + Chr3:57148166-57148185 None:intergenic 15.0%
!! AAATTCAGTAAAAGAAAATT+AGG + Chr3:57150979-57150998 None:intergenic 15.0%
!! AATAAAACAAACATAATTGA+TGG + Chr3:57148647-57148666 None:intergenic 15.0%
!! AATTCAGTAAAAGAAAATTA+GGG + Chr3:57150978-57150997 None:intergenic 15.0%
!! AATTGGATGTAATTTATATA+GGG - Chr3:57147253-57147272 MsG0380014608.01.T01:intron 15.0%
!! ACTAGAAAAATAAAAGATAT+TGG - Chr3:57149307-57149326 MsG0380014608.01.T01:intron 15.0%
!! ATGAGATAATAAAAATAAGA+TGG + Chr3:57152554-57152573 None:intergenic 15.0%
!! GTTTATTTATATTACATGAA+TGG + Chr3:57147441-57147460 None:intergenic 15.0%
!! TGATTAAACTATCATAAAAA+AGG + Chr3:57147129-57147148 None:intergenic 15.0%
!! TGTATGTTTCATTATAAATT+GGG + Chr3:57147906-57147925 None:intergenic 15.0%
!! TTTATTTAATATTACATGGA+TGG + Chr3:57147524-57147543 None:intergenic 15.0%
!!! AAAATATGAAATTTTCACAT+AGG + Chr3:57151717-57151736 None:intergenic 15.0%
!!! ATCGAAAAATTGAATTTTAT+AGG + Chr3:57146100-57146119 None:intergenic 15.0%
!!! CATTTCTTATTTTAAACAAA+AGG - Chr3:57152948-57152967 MsG0380014608.01.T01:five_prime_UTR 15.0%
!!! GATTATCTTTTTGATTATAT+TGG - Chr3:57146213-57146232 MsG0380014608.01.T01:intron 15.0%
!!! GCTAATAGATTTAATTTATT+TGG - Chr3:57149999-57150018 MsG0380014608.01.T01:intron 15.0%
!!! TTATTGTTTACTTATTTTTC+AGG - Chr3:57151768-57151787 MsG0380014608.01.T01:intron 15.0%
!!! TTTACAATTTGAAATGAAAT+TGG + Chr3:57153009-57153028 None:intergenic 15.0%
!!! TTTTGCATATTTTTATATCA+TGG - Chr3:57150914-57150933 MsG0380014608.01.T01:intron 15.0%
!! AAAAAATATAAGCAAGAGAA+TGG + Chr3:57150041-57150060 None:intergenic 20.0%
!! AAACAGTTCTTGATATTTAA+CGG + Chr3:57151821-57151840 None:intergenic 20.0%
!! AAACTGAATAAAAAATTACC+TGG + Chr3:57148257-57148276 None:intergenic 20.0%
!! AAATACTTAAAACTGTTATG+TGG + Chr3:57148309-57148328 None:intergenic 20.0%
!! AGAAAAATAAAAGATATTGG+AGG - Chr3:57149310-57149329 MsG0380014608.01.T01:intron 20.0%
!! AGAAAACTCAAAATAAACTT+AGG + Chr3:57150948-57150967 None:intergenic 20.0%
!! ATCAAAAAGATAATCTCATA+TGG + Chr3:57146208-57146227 None:intergenic 20.0%
!! ATTTATATTACATGAATGGT+AGG + Chr3:57147437-57147456 None:intergenic 20.0%
!! CACGTTTATTTAATATTACA+TGG + Chr3:57147528-57147547 None:intergenic 20.0%
!! CTACTTAACTGAATATTAAT+CGG + Chr3:57148489-57148508 None:intergenic 20.0%
!! CTGTATGTTTCATTATAAAT+TGG + Chr3:57147907-57147926 None:intergenic 20.0%
!! GAATTGGATGTAATTTATAT+AGG - Chr3:57147252-57147271 MsG0380014608.01.T01:intron 20.0%
!! GTGAATTTAAATTATTTCAG+CGG - Chr3:57147558-57147577 MsG0380014608.01.T01:intron 20.0%
!! TCAACTGATTGATTAATTTA+AGG - Chr3:57153064-57153083 MsG0380014608.01.T01:five_prime_UTR 20.0%
!! TGTTAAAAAATTACCTTGAT+TGG + Chr3:57149890-57149909 None:intergenic 20.0%
!! TTAACAACTAAAATCTTCAA+AGG + Chr3:57151918-57151937 None:intergenic 20.0%
!! TTAAGTTATTTATCCAAACT+AGG - Chr3:57146929-57146948 MsG0380014608.01.T01:intron 20.0%
!! TTCACAAAAAGAACATAATA+CGG + Chr3:57149257-57149276 None:intergenic 20.0%
!! TTTGATGAAAAGAATGATAA+CGG - Chr3:57151357-57151376 MsG0380014608.01.T01:intron 20.0%
!!! AAAAATATTTTAACTGGCAA+TGG + Chr3:57150879-57150898 None:intergenic 20.0%
!!! AAAATATTTTAACTGGCAAT+GGG + Chr3:57150878-57150897 None:intergenic 20.0%
!!! AAAGGCAAAAATATTTTAAC+TGG + Chr3:57150885-57150904 None:intergenic 20.0%
!!! AATAAGTTGAAAACAACTTA+CGG + Chr3:57146774-57146793 None:intergenic 20.0%
!!! AATATTATCGCATTAGTTTT+TGG + Chr3:57152045-57152064 None:intergenic 20.0%
!!! AATTTGTTTGAATTTTTTGC+AGG - Chr3:57148170-57148189 MsG0380014608.01.T01:intron 20.0%
!!! ACATAACAGTTTTAAGTATT+TGG - Chr3:57148308-57148327 MsG0380014608.01.T01:CDS 20.0%
!!! ACTTTTAGAAAACTAATTCT+TGG - Chr3:57152004-57152023 MsG0380014608.01.T01:intron 20.0%
!!! AGATATGTTTTGTATCATAT+AGG - Chr3:57150837-57150856 MsG0380014608.01.T01:CDS 20.0%
!!! CTAATAATAATGACTTTTTC+CGG - Chr3:57151604-57151623 MsG0380014608.01.T01:intron 20.0%
!!! CTTTAATCTGATTCATTTTA+TGG - Chr3:57150774-57150793 MsG0380014608.01.T01:intron 20.0%
!!! GTTAAAATATTTTTGCCTTT+AGG - Chr3:57150885-57150904 MsG0380014608.01.T01:intron 20.0%
!!! GTTTGTTTTATTGTGAATAA+CGG - Chr3:57148655-57148674 MsG0380014608.01.T01:intron 20.0%
!!! TAATAATAATGACTTTTTCC+GGG - Chr3:57151605-57151624 MsG0380014608.01.T01:intron 20.0%
!!! TAGTACTTTTGCAATTAAAT+TGG - Chr3:57147308-57147327 MsG0380014608.01.T01:intron 20.0%
!!! TATCTTTTTGATTATATTGG+TGG - Chr3:57146216-57146235 MsG0380014608.01.T01:intron 20.0%
!!! TTTATGTTGTTTGAAATTGT+GGG - Chr3:57146144-57146163 MsG0380014608.01.T01:intron 20.0%
!!! TTTCTTTTACTGAATTTGAA+AGG - Chr3:57150982-57151001 MsG0380014608.01.T01:intron 20.0%
!!! TTTTAAAAGAAAGACAGTTA+TGG - Chr3:57151305-57151324 MsG0380014608.01.T01:intron 20.0%
!!! TTTTATGTTGTTTGAAATTG+TGG - Chr3:57146143-57146162 MsG0380014608.01.T01:intron 20.0%
!!! TTTTGTATTTTAGTGCTAAT+AGG - Chr3:57148780-57148799 MsG0380014608.01.T01:intron 20.0%
! AAAAAAACAGTCACATTTCT+AGG + Chr3:57152727-57152746 None:intergenic 25.0%
! AAAATATATTCCCAATCTAC+AGG + Chr3:57150114-57150133 None:intergenic 25.0%
! AAACACAAATGAATAGTGTT+TGG - Chr3:57152318-57152337 MsG0380014608.01.T01:CDS 25.0%
! AAACTATCATAAAAAAGGAC+TGG + Chr3:57147124-57147143 None:intergenic 25.0%
! AACAACAAATTCTGTTCAAT+GGG - Chr3:57146380-57146399 MsG0380014608.01.T01:intron 25.0%
! AACACTATTATGTGGAAATA+TGG + Chr3:57149724-57149743 None:intergenic 25.0%
! AAGCATAAATGAATAGTGTT+TGG + Chr3:57152437-57152456 None:intergenic 25.0%
! AAGTATATAACAAATCGACA+AGG + Chr3:57150598-57150617 None:intergenic 25.0%
! AATAAGATGGAAAACAACTT+TGG + Chr3:57152541-57152560 None:intergenic 25.0%
! AATCTTATAGATAGATGTCA+TGG + Chr3:57149125-57149144 None:intergenic 25.0%
! AATTATGACAATGAGATATC+TGG + Chr3:57152577-57152596 None:intergenic 25.0%
! ACAACATAACATCAATGAAA+AGG + Chr3:57146515-57146534 None:intergenic 25.0%
! ACTCAAAATAAACTTAGGTT+AGG + Chr3:57150943-57150962 None:intergenic 25.0%
! AGATATCTATATTGCAAAAG+GGG - Chr3:57152130-57152149 MsG0380014608.01.T01:intron 25.0%
! ATAAGATGGAAAACAACTTT+GGG + Chr3:57152540-57152559 None:intergenic 25.0%
! ATCATAAAAAAGGACTGAAT+AGG + Chr3:57147119-57147138 None:intergenic 25.0%
! ATGTATTCTACCCAATATTT+CGG + Chr3:57149861-57149880 None:intergenic 25.0%
! CAAAAACCAAGGATTTATTT+GGG - Chr3:57152242-57152261 MsG0380014608.01.T01:intron 25.0%
! CAGATATCTATATTGCAAAA+GGG - Chr3:57152129-57152148 MsG0380014608.01.T01:intron 25.0%
! CATGTAAAGAATATGAGATA+TGG - Chr3:57149333-57149352 MsG0380014608.01.T01:intron 25.0%
! CGATTAATATTCAGTTAAGT+AGG - Chr3:57148487-57148506 MsG0380014608.01.T01:intron 25.0%
! CGGAAAAAGTCATTATTATT+AGG + Chr3:57151606-57151625 None:intergenic 25.0%
! CTAAAATAACTCGATCTAAA+CGG + Chr3:57146684-57146703 None:intergenic 25.0%
! GTAAGTTTAGCAGTAAAATA+AGG + Chr3:57152172-57152191 None:intergenic 25.0%
! GTATTTATTTCCTGTAGATT+GGG - Chr3:57150101-57150120 MsG0380014608.01.T01:CDS 25.0%
! TAAAATAACTCGATCTAAAC+GGG + Chr3:57146683-57146702 None:intergenic 25.0%
! TAAATAAACGTGATGAATTG+TGG - Chr3:57147452-57147471 MsG0380014608.01.T01:intron 25.0%
! TATGCAATCAAAATGACTTA+GGG - Chr3:57149392-57149411 MsG0380014608.01.T01:intron 25.0%
! TATTATTGCAGTGTAAATGA+GGG - Chr3:57151645-57151664 MsG0380014608.01.T01:intron 25.0%
! TCAGATATCTATATTGCAAA+AGG - Chr3:57152128-57152147 MsG0380014608.01.T01:intron 25.0%
! TCATAAAAAAGGACTGAATA+GGG + Chr3:57147118-57147137 None:intergenic 25.0%
! TGATAATTCCATATTTCAAG+TGG + Chr3:57147359-57147378 None:intergenic 25.0%
! TGATGAACAAATTCTCAATT+TGG - Chr3:57145895-57145914 MsG0380014608.01.T01:CDS 25.0%
! TGTATTTATTTCCTGTAGAT+TGG - Chr3:57150100-57150119 MsG0380014608.01.T01:CDS 25.0%
! TTATGCAATCAAAATGACTT+AGG - Chr3:57149391-57149410 MsG0380014608.01.T01:intron 25.0%
! TTATTATTGCAGTGTAAATG+AGG - Chr3:57151644-57151663 MsG0380014608.01.T01:intron 25.0%
! TTGCAATTAAATTGGAAGTT+TGG - Chr3:57147316-57147335 MsG0380014608.01.T01:intron 25.0%
! TTGCTTACTATTCTCAAATT+AGG - Chr3:57146553-57146572 MsG0380014608.01.T01:intron 25.0%
! TTTAATATTACATGGATGGT+AGG + Chr3:57147520-57147539 None:intergenic 25.0%
! TTTATAGGAAAAAACGAGAT+GGG + Chr3:57146085-57146104 None:intergenic 25.0%
! TTTGATCTAAATAGTGTATC+AGG - Chr3:57151151-57151170 MsG0380014608.01.T01:CDS 25.0%
! TTTGTATTTGTCCTATTTAG+AGG - Chr3:57151535-57151554 MsG0380014608.01.T01:intron 25.0%
!! AATGAATGATTTGACTTTGA+AGG - Chr3:57152761-57152780 MsG0380014608.01.T01:CDS 25.0%
!! ACTCTTATATTACTTGTTGA+AGG + Chr3:57145747-57145766 None:intergenic 25.0%
!! AGAATGTAGAATGATTTTGA+TGG - Chr3:57149763-57149782 MsG0380014608.01.T01:CDS 25.0%
!! CTAGTTTATGTATACCTTTT+GGG - Chr3:57149514-57149533 MsG0380014608.01.T01:intron 25.0%
!! CTCTTATATTACTTGTTGAA+GGG + Chr3:57145746-57145765 None:intergenic 25.0%
!! GATATCTAAGATTGTAACTA+AGG + Chr3:57150221-57150240 None:intergenic 25.0%
!! GTTTGTTTGTCATAATTTTC+TGG - Chr3:57148512-57148531 MsG0380014608.01.T01:intron 25.0%
!! TATGATAAAGCACTAATCTT+TGG + Chr3:57151889-57151908 None:intergenic 25.0%
!! TCTTATATTACTTGTTGAAG+GGG + Chr3:57145745-57145764 None:intergenic 25.0%
!! TTTCTTAAGTTTCTCTGAAA+AGG + Chr3:57148554-57148573 None:intergenic 25.0%
!! TTTTATAGGAAAAAACGAGA+TGG + Chr3:57146086-57146105 None:intergenic 25.0%
!!! ATATGGTTTTAATTTGTGGT+TGG - Chr3:57146293-57146312 MsG0380014608.01.T01:intron 25.0%
!!! TAATTTTAGCATGCCTTAAT+GGG + Chr3:57146977-57146996 None:intergenic 25.0%
!!! TAATTTTTTAACAGATCTCG+TGG - Chr3:57149897-57149916 MsG0380014608.01.T01:intron 25.0%
!!! TCTCATATGGTTTTAATTTG+TGG - Chr3:57146289-57146308 MsG0380014608.01.T01:intron 25.0%
!!! TTAATTGCAAAAGTACTACT+TGG + Chr3:57147306-57147325 None:intergenic 25.0%
!!! TTAATTTTAGCATGCCTTAA+TGG + Chr3:57146978-57146997 None:intergenic 25.0%
!!! TTGTTATTTGGTTTTGGTAT+TGG - Chr3:57147869-57147888 MsG0380014608.01.T01:intron 25.0%
AAAACAACCAACCATAATCA+GGG + Chr3:57152789-57152808 None:intergenic 30.0%
AAAACTTTCTGTCATTGAAG+AGG + Chr3:57148966-57148985 None:intergenic 30.0%
AAAGTATACTTACTCGAAGT+GGG + Chr3:57150711-57150730 None:intergenic 30.0%
AAGTGATGTTGAATCTCATA+TGG - Chr3:57146276-57146295 MsG0380014608.01.T01:intron 30.0%
AATCCAAGCTGTAATATTTC+AGG - Chr3:57148824-57148843 MsG0380014608.01.T01:intron 30.0%
ACAGGATCATAGTTAAATCA+CGG + Chr3:57147025-57147044 None:intergenic 30.0%
ACATAAACTAGCAATGGTTT+AGG + Chr3:57149505-57149524 None:intergenic 30.0%
ACTCACAAAACACTATTATG+TGG + Chr3:57149732-57149751 None:intergenic 30.0%
ACTTTGTTGAAGATGTGATT+AGG + Chr3:57148401-57148420 None:intergenic 30.0%
AGACGTGATTCTAATTTGAT+GGG - Chr3:57147651-57147670 MsG0380014608.01.T01:intron 30.0%
AGGTATACATAAACTAGCAA+TGG + Chr3:57149511-57149530 None:intergenic 30.0%
AGTGATCTTCATGTTGAATT+GGG + Chr3:57145864-57145883 None:intergenic 30.0%
ATCATAAAAAAGGACTGGAT+AGG + Chr3:57147158-57147177 None:intergenic 30.0%
ATGAAACATACAGAATGATC+CGG - Chr3:57147914-57147933 MsG0380014608.01.T01:intron 30.0%
ATGATTACATACAGATTCGT+TGG + Chr3:57145930-57145949 None:intergenic 30.0%
ATGGTAAAGTGAAAGACTAT+TGG + Chr3:57145792-57145811 None:intergenic 30.0%
ATGTACTAGTGCAAATTCAA+GGG + Chr3:57149186-57149205 None:intergenic 30.0%
ATTGCTATGAATCAGCATAT+AGG + Chr3:57150526-57150545 None:intergenic 30.0%
ATTTGGCAGATACACATTAA+AGG - Chr3:57149474-57149493 MsG0380014608.01.T01:intron 30.0%
CAACAACAAATTCTGTTCAA+TGG - Chr3:57146379-57146398 MsG0380014608.01.T01:intron 30.0%
CAAGCTCTTCAATTATTCAA+TGG - Chr3:57152879-57152898 MsG0380014608.01.T01:intron 30.0%
CAATGATCTCAATAAAATCC+AGG - Chr3:57147959-57147978 MsG0380014608.01.T01:intron 30.0%
CAGAATAATGAAAATGCACA+AGG + Chr3:57148131-57148150 None:intergenic 30.0%
CATAAACTAGCAATGGTTTA+GGG + Chr3:57149504-57149523 None:intergenic 30.0%
CCAAAAACCAAGGATTTATT+TGG - Chr3:57152241-57152260 MsG0380014608.01.T01:intron 30.0%
CTATTGGAAGACTTATAAGA+AGG + Chr3:57145776-57145795 None:intergenic 30.0%
CTGAATAAAAAATTACCTGG+CGG + Chr3:57148254-57148273 None:intergenic 30.0%
GAAAACCGAGAAAAAGTAAT+TGG + Chr3:57145703-57145722 None:intergenic 30.0%
GACTGTAAATATCATCAATC+AGG + Chr3:57153046-57153065 None:intergenic 30.0%
GATTATTTGAACTTGTACTG+TGG - Chr3:57151461-57151480 MsG0380014608.01.T01:intron 30.0%
GTTAAGTTTGATCTAACCTT+GGG - Chr3:57146649-57146668 MsG0380014608.01.T01:intron 30.0%
TAAAACAGATAGTTCAGAGA+AGG - Chr3:57149284-57149303 MsG0380014608.01.T01:intron 30.0%
TAAAATACATGCACCTCATT+GGG + Chr3:57152105-57152124 None:intergenic 30.0%
TAAAGTATACTTACTCGAAG+TGG + Chr3:57150712-57150731 None:intergenic 30.0%
TAGACGTGATTCTAATTTGA+TGG - Chr3:57147650-57147669 MsG0380014608.01.T01:intron 30.0%
TATCGATAAGAATAACAGCT+CGG + Chr3:57150408-57150427 None:intergenic 30.0%
TATGCAAAAACAGAACCTAA+AGG + Chr3:57150903-57150922 None:intergenic 30.0%
TATGTACTAGTGCAAATTCA+AGG + Chr3:57149187-57149206 None:intergenic 30.0%
TCAATTATTCAATGGCAATG+AGG - Chr3:57152887-57152906 MsG0380014608.01.T01:CDS 30.0%
TCATAAAAAAGGACTGGATA+GGG + Chr3:57147157-57147176 None:intergenic 30.0%
TCCACCTATAACACATAAAA+GGG + Chr3:57146012-57146031 None:intergenic 30.0%
TGATTACATACAGATTCGTT+GGG + Chr3:57145929-57145948 None:intergenic 30.0%
TGCTCTTCATTTCATTAGAA+TGG + Chr3:57148367-57148386 None:intergenic 30.0%
TGTTAAGTTTGATCTAACCT+TGG - Chr3:57146648-57146667 MsG0380014608.01.T01:intron 30.0%
TTAAAATACATGCACCTCAT+TGG + Chr3:57152106-57152125 None:intergenic 30.0%
TTACATCCAATTCAGCTATA+TGG + Chr3:57147245-57147264 None:intergenic 30.0%
TTCCACCTATAACACATAAA+AGG + Chr3:57146013-57146032 None:intergenic 30.0%
TTGGTTACATGAAACAAGTA+TGG + Chr3:57148588-57148607 None:intergenic 30.0%
TTTCATCTAACCATACAGAA+AGG - Chr3:57148680-57148699 MsG0380014608.01.T01:intron 30.0%
TTTGGCAGATACACATTAAA+GGG - Chr3:57149475-57149494 MsG0380014608.01.T01:intron 30.0%
! AAAGAAAATGTTTTGCGAGT+TGG - Chr3:57150459-57150478 MsG0380014608.01.T01:intron 30.0%
! AGAAAGGAATTGATGACAAT+TGG - Chr3:57148696-57148715 MsG0380014608.01.T01:intron 30.0%
! AGTATTGAAGCTCAAATCAT+TGG + Chr3:57147589-57147608 None:intergenic 30.0%
! ATTTTTGTCCATATGGAACA+GGG + Chr3:57151035-57151054 None:intergenic 30.0%
! GAAAGGAATTGATGACAATT+GGG - Chr3:57148697-57148716 MsG0380014608.01.T01:intron 30.0%
! GATTTAATTTACTCCCAATG+AGG - Chr3:57152089-57152108 MsG0380014608.01.T01:intron 30.0%
! GTTTTGTATCATATAGGAAG+AGG - Chr3:57150843-57150862 MsG0380014608.01.T01:CDS 30.0%
! TAATTGATGGTTATGAACAG+TGG + Chr3:57148634-57148653 None:intergenic 30.0%
! TCAACCCTTTTATGTGTTAT+AGG - Chr3:57146005-57146024 MsG0380014608.01.T01:intron 30.0%
! TCTAAGATTGTAACTAAGGA+TGG + Chr3:57150217-57150236 None:intergenic 30.0%
! TTCAATGACAGAAAGTTTTG+TGG - Chr3:57148967-57148986 MsG0380014608.01.T01:CDS 30.0%
! TTCCACCAAACAATCTTTTT+AGG - Chr3:57151562-57151581 MsG0380014608.01.T01:intron 30.0%
! TTTTGTGCTTCAACATCAAA+AGG + Chr3:57148213-57148232 None:intergenic 30.0%
!! AGAATTTGTTGTTGCTGAAT+AGG + Chr3:57146373-57146392 None:intergenic 30.0%
!! ATCAAAGTGTTGTCAAATAG+TGG + Chr3:57151137-57151156 None:intergenic 30.0%
!! ATGGATTTTCACTTTGTTTC+AGG - Chr3:57149007-57149026 MsG0380014608.01.T01:intron 30.0%
!! ATTATGGTTGGTTGTTTTGT+AGG - Chr3:57152791-57152810 MsG0380014608.01.T01:intron 30.0%
!! CCAAATAAATCCTTGGTTTT+TGG + Chr3:57152244-57152263 None:intergenic 30.0%
!! GCTAGTTTATGTATACCTTT+TGG - Chr3:57149513-57149532 MsG0380014608.01.T01:intron 30.0%
!! GTGTTTGATTTTTGTCCATA+TGG + Chr3:57151042-57151061 None:intergenic 30.0%
!! TAGAATGATTTTGATGGTTG+TGG - Chr3:57149769-57149788 MsG0380014608.01.T01:CDS 30.0%
!! TTGTGTGTCTTATTGCTTTT+TGG - Chr3:57149959-57149978 MsG0380014608.01.T01:intron 30.0%
!! TTTATTTGGGAGTGCTTATT+TGG - Chr3:57152255-57152274 MsG0380014608.01.T01:intron 30.0%
!!! AAGAAGAATGCTATTTTGAG+TGG + Chr3:57148902-57148921 None:intergenic 30.0%
!!! AGTTATTTTAGTCTATCCAC+TGG - Chr3:57146693-57146712 MsG0380014608.01.T01:intron 30.0%
!!! TTTTTTTGGACCAAAAACCA+AGG - Chr3:57152231-57152250 MsG0380014608.01.T01:intron 30.0%
AAATAATGGCCCTATAGCAT+AGG + Chr3:57151204-57151223 None:intergenic 35.0%
AACACTAACCCAAGTAACTT+AGG + Chr3:57152484-57152503 None:intergenic 35.0%
AACATATTGCCCTATGCTAT+AGG - Chr3:57151236-57151255 MsG0380014608.01.T01:intron 35.0%
AACTCACAAACATACCCTAA+GGG - Chr3:57149634-57149653 MsG0380014608.01.T01:intron 35.0%
AAGACAGTTATGGCTAATTC+TGG - Chr3:57151315-57151334 MsG0380014608.01.T01:intron 35.0%
AATAATGGCCCTATAGCATA+GGG + Chr3:57151203-57151222 None:intergenic 35.0%
AATACATGTAGCTCCAATCA+AGG - Chr3:57149874-57149893 MsG0380014608.01.T01:intron 35.0%
AATCAAAGTGACATGTTTGC+AGG + Chr3:57151278-57151297 None:intergenic 35.0%
AATTCTGTTCAATGGGAATG+AGG - Chr3:57146387-57146406 MsG0380014608.01.T01:intron 35.0%
ACACATCAAATGTGTACCAA+TGG + Chr3:57152686-57152705 None:intergenic 35.0%
ACACATTTGATGTGTGAATG+TGG - Chr3:57152691-57152710 MsG0380014608.01.T01:intron 35.0%
ACATATTGCCCTATGCTATA+GGG - Chr3:57151237-57151256 MsG0380014608.01.T01:intron 35.0%
ACTACAATTAACATGAGCAC+AGG + Chr3:57147043-57147062 None:intergenic 35.0%
ACTTAGTTTATGACCTAAGG+AGG - Chr3:57152278-57152297 MsG0380014608.01.T01:intron 35.0%
ACTTTGATGAAGATCAGTTC+TGG - Chr3:57149447-57149466 MsG0380014608.01.T01:intron 35.0%
ACTTTGCCTCATCTAAAAAC+CGG + Chr3:57150660-57150679 None:intergenic 35.0%
AGCCTAAAAAGATTGTTTGG+TGG + Chr3:57151567-57151586 None:intergenic 35.0%
ATAAAAAATTACCTGGCGGA+TGG + Chr3:57148250-57148269 None:intergenic 35.0%
ATCCATGTTAAGTTCACCAT+TGG - Chr3:57152667-57152686 MsG0380014608.01.T01:intron 35.0%
ATCCTTCCATCTCATACTTA+CGG + Chr3:57146594-57146613 None:intergenic 35.0%
ATTCTGTCTTGAGTAACATC+CGG - Chr3:57148341-57148360 MsG0380014608.01.T01:CDS 35.0%
CAAAACAACCAACCATAATC+AGG + Chr3:57152790-57152809 None:intergenic 35.0%
CAGTGATCTTCATGTTGAAT+TGG + Chr3:57145865-57145884 None:intergenic 35.0%
CCAAAGAGAAACTCCATATT+GGG + Chr3:57150166-57150185 None:intergenic 35.0%
CCAATATGGAGTTTCTCTTT+GGG - Chr3:57150164-57150183 MsG0380014608.01.T01:intron 35.0%
CTTCATTTCATTAGAATGGC+CGG + Chr3:57148363-57148382 None:intergenic 35.0%
GAAAACCAACCTTGCAAAAA+TGG + Chr3:57150504-57150523 None:intergenic 35.0%
GAGTTAGCACAAACTATTCT+GGG - Chr3:57147936-57147955 MsG0380014608.01.T01:intron 35.0%
GATTTGAGCTTCAATACTGA+TGG - Chr3:57147591-57147610 MsG0380014608.01.T01:intron 35.0%
GCAAGCCTAAAAAGATTGTT+TGG + Chr3:57151570-57151589 None:intergenic 35.0%
GGAATGGAACATGCATTAAA+TGG - Chr3:57148988-57149007 MsG0380014608.01.T01:CDS 35.0%
GTCATCAATTCCTTTCTGTA+TGG + Chr3:57148693-57148712 None:intergenic 35.0%
GTGAACTTAACATGGATTTG+AGG + Chr3:57152664-57152683 None:intergenic 35.0%
GTGAGTAATAATTGCCTAGT+AGG + Chr3:57147205-57147224 None:intergenic 35.0%
GTTATAGGTGGAAAACGTTA+AGG - Chr3:57146020-57146039 MsG0380014608.01.T01:intron 35.0%
TAACAGCTAATCAACAGAGA+AGG + Chr3:57147778-57147797 None:intergenic 35.0%
TAAGCTCTCCATGATAACTA+TGG - Chr3:57146798-57146817 MsG0380014608.01.T01:intron 35.0%
TACCAATGGTGAACTTAACA+TGG + Chr3:57152672-57152691 None:intergenic 35.0%
TATGCTATAGGGCCATTATT+TGG - Chr3:57151203-57151222 MsG0380014608.01.T01:CDS 35.0%
TATGTTGACATGGAGGTTAA+TGG - Chr3:57148855-57148874 MsG0380014608.01.T01:intron 35.0%
TCTGCACATAACAACAAGAA+GGG + Chr3:57150622-57150641 None:intergenic 35.0%
TCTTCTCTTCATATGTCAAG+AGG - Chr3:57148069-57148088 MsG0380014608.01.T01:intron 35.0%
TGACCTGAAATATTACAGCT+TGG + Chr3:57148830-57148849 None:intergenic 35.0%
TGGACTTAGTTTATGACCTA+AGG - Chr3:57152275-57152294 MsG0380014608.01.T01:intron 35.0%
TTCATTTGTGTTTGCGACTA+TGG + Chr3:57152311-57152330 None:intergenic 35.0%
TTCTACCCAATATTTCGGTT+TGG + Chr3:57149856-57149875 None:intergenic 35.0%
TTGTATTGCCCTATGCTATA+GGG - Chr3:57151192-57151211 MsG0380014608.01.T01:CDS 35.0%
TTGTCAAATAGTGGCTATAG+TGG + Chr3:57151128-57151147 None:intergenic 35.0%
TTTCAGCAGTTACAAAATCC+AGG - Chr3:57147075-57147094 MsG0380014608.01.T01:intron 35.0%
TTTGCAGGATTGCCAAATAA+TGG + Chr3:57151218-57151237 None:intergenic 35.0%
TTTGTATTGCCCTATGCTAT+AGG - Chr3:57151191-57151210 MsG0380014608.01.T01:CDS 35.0%
! AAACGTTAAGGCATTACTTG+AGG - Chr3:57146032-57146051 MsG0380014608.01.T01:intron 35.0%
! ACCCTTTTATGTGTTATAGG+TGG - Chr3:57146008-57146027 MsG0380014608.01.T01:intron 35.0%
! AGAATAGTTTGTGCTAACTC+CGG + Chr3:57147936-57147955 None:intergenic 35.0%
! AGATCAGTTCTGGTTACATT+TGG - Chr3:57149457-57149476 MsG0380014608.01.T01:intron 35.0%
! AGCGCAGTCTTTTGATATAA+TGG + Chr3:57149060-57149079 None:intergenic 35.0%
! AGCTGTTTCCATAGTTATCA+TGG + Chr3:57146809-57146828 None:intergenic 35.0%
! ATATTACTTGTTGAAGGGGT+TGG + Chr3:57145741-57145760 None:intergenic 35.0%
! CTTTTAGATCAGCGTTACAA+AGG - Chr3:57149812-57149831 MsG0380014608.01.T01:intron 35.0%
! GATAAAGCACTAATCTTTGG+AGG + Chr3:57151886-57151905 None:intergenic 35.0%
! GATTTTTGTCCATATGGAAC+AGG + Chr3:57151036-57151055 None:intergenic 35.0%
! TTTCAGGCATTTGTTGATAG+TGG - Chr3:57149023-57149042 MsG0380014608.01.T01:intron 35.0%
! TTTTTGTCCATATGGAACAG+GGG + Chr3:57151034-57151053 None:intergenic 35.0%
!! AAGTTACTTGGGTTAGTGTT+TGG - Chr3:57152484-57152503 MsG0380014608.01.T01:intron 35.0%
!! TATGTTTGTGAGTTGGTTTG+AGG + Chr3:57149628-57149647 None:intergenic 35.0%
!! TGACAGAAAGTTTTGTGGAA+TGG - Chr3:57148972-57148991 MsG0380014608.01.T01:CDS 35.0%
!! TTCGATGCTTGCTTGTTATT+TGG - Chr3:57147857-57147876 MsG0380014608.01.T01:intron 35.0%
!!! ACTTATTTTTCAGGAGCTTC+TGG - Chr3:57151777-57151796 MsG0380014608.01.T01:intron 35.0%
!!! GCTTGCTTGTTATTTGGTTT+TGG - Chr3:57147863-57147882 MsG0380014608.01.T01:intron 35.0%
AACCAAATAGCTAGCAAGCA+AGG + Chr3:57146619-57146638 None:intergenic 40.0%
AAGTTTGGAAGATGCTTAGC+TGG - Chr3:57147331-57147350 MsG0380014608.01.T01:intron 40.0%
AATAACTCGATCTAAACGGG+CGG + Chr3:57146680-57146699 None:intergenic 40.0%
AGATCAGCGTTACAAAGGAA+TGG - Chr3:57149817-57149836 MsG0380014608.01.T01:intron 40.0%
AGCAATAATCCATCACAAGG+AGG - Chr3:57151415-57151434 MsG0380014608.01.T01:intron 40.0%
AGCACTCCCAAATAAATCCT+TGG + Chr3:57152251-57152270 None:intergenic 40.0%
AGCTGGTACCACTTGAAATA+TGG - Chr3:57147348-57147367 MsG0380014608.01.T01:intron 40.0%
AGGACCAGAAAAAGAGCAAT+AGG + Chr3:57148946-57148965 None:intergenic 40.0%
AGTTGGCCAAACCGAAATAT+TGG - Chr3:57149847-57149866 MsG0380014608.01.T01:intron 40.0%
ATTAAGTACGACGTGCGAAA+AGG + Chr3:57151860-57151879 None:intergenic 40.0%
CAACTCACAAACATACCCTA+AGG - Chr3:57149633-57149652 MsG0380014608.01.T01:intron 40.0%
CACAAGGAATACGAATGAAG+CGG + Chr3:57148115-57148134 None:intergenic 40.0%
CATGCTACACTAACCCATTA+AGG - Chr3:57146961-57146980 MsG0380014608.01.T01:intron 40.0%
CATGTTGTATGTTGACATGG+AGG - Chr3:57148848-57148867 MsG0380014608.01.T01:intron 40.0%
CCCAAAGAGAAACTCCATAT+TGG + Chr3:57150167-57150186 None:intergenic 40.0%
CCCAATATGGAGTTTCTCTT+TGG - Chr3:57150163-57150182 MsG0380014608.01.T01:intron 40.0%
CTCTGCACATAACAACAAGA+AGG + Chr3:57150623-57150642 None:intergenic 40.0%
CTTAGGGTATGTTTGTGAGT+TGG + Chr3:57149635-57149654 None:intergenic 40.0%
CTTTGCCTCATCTAAAAACC+GGG + Chr3:57150659-57150678 None:intergenic 40.0%
GACGCTGTAATTCACTTCTT+TGG + Chr3:57148007-57148026 None:intergenic 40.0%
GCGTCAAAAAGAAGAAGAGT+TGG - Chr3:57148022-57148041 MsG0380014608.01.T01:intron 40.0%
GGAAAAAACGAGATGGGTAT+TGG + Chr3:57146079-57146098 None:intergenic 40.0%
GGAGTTAGCACAAACTATTC+TGG - Chr3:57147935-57147954 MsG0380014608.01.T01:intron 40.0%
GGTATGCACTTCGATATAAC+TGG - Chr3:57149090-57149109 MsG0380014608.01.T01:intron 40.0%
GGTCATGTTGTATGTTGACA+TGG - Chr3:57148845-57148864 MsG0380014608.01.T01:intron 40.0%
GGTGGAATGAACCTCTAAAT+AGG + Chr3:57151549-57151568 None:intergenic 40.0%
GGTTAATGGTGTACCATTGA+AGG - Chr3:57148869-57148888 MsG0380014608.01.T01:intron 40.0%
GTTGAAGAACAAGAAGAGAG+AGG + Chr3:57145827-57145846 None:intergenic 40.0%
GTTGGCCAAACCGAAATATT+GGG - Chr3:57149848-57149867 MsG0380014608.01.T01:intron 40.0%
TAACAGATCTCGTGGACAAA+GGG - Chr3:57149905-57149924 MsG0380014608.01.T01:intron 40.0%
TCCTCTGACCTAAGTTACTT+GGG - Chr3:57152473-57152492 MsG0380014608.01.T01:intron 40.0%
TCTCAGAAATTGAGTGCACT+TGG - Chr3:57146418-57146437 MsG0380014608.01.T01:intron 40.0%
TGAGGGCAGCAAAAAGTAAT+TGG + Chr3:57148607-57148626 None:intergenic 40.0%
TGTCTCTTCACAAACCTACT+AGG - Chr3:57147188-57147207 MsG0380014608.01.T01:CDS 40.0%
TTAACAGATCTCGTGGACAA+AGG - Chr3:57149904-57149923 MsG0380014608.01.T01:intron 40.0%
TTATGAACAGTGGTCCTTGA+GGG + Chr3:57148624-57148643 None:intergenic 40.0%
TTCCTCTGACCTAAGTTACT+TGG - Chr3:57152472-57152491 MsG0380014608.01.T01:intron 40.0%
TTTCCTCCGTAAGTATGAGA+TGG - Chr3:57146585-57146604 MsG0380014608.01.T01:intron 40.0%
! AAGCAGCTGGGTTTCTTTTT+GGG - Chr3:57152913-57152932 MsG0380014608.01.T01:CDS 40.0%
! AGAGAGGTTTGCTTTATCGA+TGG + Chr3:57145811-57145830 None:intergenic 40.0%
! AGATGAGGCAAAGTATTCCA+AGG - Chr3:57150666-57150685 MsG0380014608.01.T01:intron 40.0%
! ATTCTCACCGGTGTCAATTT+AGG - Chr3:57150338-57150357 MsG0380014608.01.T01:intron 40.0%
! CTTGCTTATGCTCTAAACCA+AGG - Chr3:57152198-57152217 MsG0380014608.01.T01:intron 40.0%
! CTTTGAAGGTTCCCTGATTA+TGG - Chr3:57152775-57152794 MsG0380014608.01.T01:intron 40.0%
! GTGGACAAAGGGAAAGATTT+TGG - Chr3:57149916-57149935 MsG0380014608.01.T01:intron 40.0%
! GTTTAGAGCATAAGCAAGCA+AGG + Chr3:57152196-57152215 None:intergenic 40.0%
! TAAGGCATTACTTGAGGTTG+AGG - Chr3:57146038-57146057 MsG0380014608.01.T01:intron 40.0%
!! AATGATAACGGTGTGTTGTG+TGG - Chr3:57151369-57151388 MsG0380014608.01.T01:intron 40.0%
!! ACACGAAGTGTTGTCAATTG+TGG - Chr3:57151058-57151077 MsG0380014608.01.T01:intron 40.0%
!! ATTGAGTGCACTTGGTGTTA+AGG - Chr3:57146426-57146445 MsG0380014608.01.T01:intron 40.0%
!! CATTCTTTCAGGTTGCATCA+GGG - Chr3:57151392-57151411 MsG0380014608.01.T01:intron 40.0%
!! GAAAATGTTTTGCGAGTTGG+TGG - Chr3:57150462-57150481 MsG0380014608.01.T01:intron 40.0%
!! GTGTTTGCGAGTTGGATTTT+TGG - Chr3:57149538-57149557 MsG0380014608.01.T01:intron 40.0%
!! TTGCGAGTTGGATTTTTGGA+GGG - Chr3:57149542-57149561 MsG0380014608.01.T01:intron 40.0%
!! TTTGCGAGTTGGATTTTTGG+AGG - Chr3:57149541-57149560 MsG0380014608.01.T01:intron 40.0%
!! TTTGTGAGTTGGTTTGAGGA+GGG + Chr3:57149624-57149643 None:intergenic 40.0%
!!! ATTACTTTTTGCTGCCCTCA+AGG - Chr3:57148607-57148626 MsG0380014608.01.T01:intron 40.0%
!!! GTTTCTGTGCCATTTTTGCA+AGG - Chr3:57150492-57150511 MsG0380014608.01.T01:intron 40.0%
AAAGGAATGGCTCATGGAGT+TGG - Chr3:57149830-57149849 MsG0380014608.01.T01:intron 45.0%
AACTCGCAAACACACCCAAA+AGG + Chr3:57149531-57149550 None:intergenic 45.0%
ACCACTCTTGCAAAAGCTTC+AGG + Chr3:57148743-57148762 None:intergenic 45.0%
ACCCAAGTAACTTAGGTCAG+AGG + Chr3:57152477-57152496 None:intergenic 45.0%
AGCTTCTGGTGACAAGTCTA+AGG - Chr3:57151791-57151810 MsG0380014608.01.T01:intron 45.0%
AGGATGGTACCTGATGCTTT+CGG + Chr3:57150201-57150220 None:intergenic 45.0%
CAACTAGAGAGAGACCCTTA+GGG + Chr3:57149651-57149670 None:intergenic 45.0%
CAGAGAAAGACATACCATCC+CGG - Chr3:57150638-57150657 MsG0380014608.01.T01:intron 45.0%
CATGTCTCGTTGTCCTAGTT+TGG + Chr3:57146945-57146964 None:intergenic 45.0%
CCAGCACTAAGAACGAACAA+GGG + Chr3:57150138-57150157 None:intergenic 45.0%
CGTTACAAAGGAATGGCTCA+TGG - Chr3:57149824-57149843 MsG0380014608.01.T01:intron 45.0%
CTATGGAAGAATGCCTCCTT+AGG + Chr3:57152294-57152313 None:intergenic 45.0%
CTCCGTAAGTATGAGATGGA+AGG - Chr3:57146589-57146608 MsG0380014608.01.T01:intron 45.0%
CTTCCATCTCATACTTACGG+AGG + Chr3:57146591-57146610 None:intergenic 45.0%
GAAGAAACACCTCCTTGTGA+TGG + Chr3:57151427-57151446 None:intergenic 45.0%
GAAGGTTCCCTGATTATGGT+TGG - Chr3:57152779-57152798 MsG0380014608.01.T01:intron 45.0%
GACGCAGTCGTAAAATTTCC+TGG + Chr3:57147980-57147999 None:intergenic 45.0%
GCAACACAGATGTGCAATTG+AGG - Chr3:57149207-57149226 MsG0380014608.01.T01:intron 45.0%
GCATAGGGCAATATGTTTGC+AGG + Chr3:57151233-57151252 None:intergenic 45.0%
GCGTTGCCATATAGCTGAAT+TGG - Chr3:57147236-57147255 MsG0380014608.01.T01:CDS 45.0%
GGGAGCAATAATCCATCACA+AGG - Chr3:57151412-57151431 MsG0380014608.01.T01:intron 45.0%
GTGTTGTGTGGCATTCTTTC+AGG - Chr3:57151381-57151400 MsG0380014608.01.T01:intron 45.0%
GTTATGAACAGTGGTCCTTG+AGG + Chr3:57148625-57148644 None:intergenic 45.0%
TAGCCCACCTAAATTGACAC+CGG + Chr3:57150348-57150367 None:intergenic 45.0%
TATGGAGTTTCTCTTTGGGC+TGG - Chr3:57150168-57150187 MsG0380014608.01.T01:intron 45.0%
TCAACTAGAGAGAGACCCTT+AGG + Chr3:57149652-57149671 None:intergenic 45.0%
TCCAGCACTAAGAACGAACA+AGG + Chr3:57150139-57150158 None:intergenic 45.0%
TTGCTAATGATGACCGTCTC+TGG - Chr3:57146457-57146476 MsG0380014608.01.T01:intron 45.0%
TTGCTTTCCCCTGTTCCATA+TGG - Chr3:57151024-57151043 MsG0380014608.01.T01:intron 45.0%
! AGTGCTGGATTCTCCCAATA+TGG - Chr3:57150150-57150169 MsG0380014608.01.T01:intron 45.0%
! CAAGCAGCTGGGTTTCTTTT+TGG - Chr3:57152912-57152931 MsG0380014608.01.T01:CDS 45.0%
! GCGACCTATTGCTCTTTTTC+TGG - Chr3:57148939-57148958 MsG0380014608.01.T01:CDS 45.0%
! GGTGTACCATTGAAGGTATG+TGG - Chr3:57148876-57148895 MsG0380014608.01.T01:intron 45.0%
! TCACCGGTGTCAATTTAGGT+GGG - Chr3:57150342-57150361 MsG0380014608.01.T01:intron 45.0%
! TCCTGAAGCTTTTGCAAGAG+TGG - Chr3:57148739-57148758 MsG0380014608.01.T01:intron 45.0%
! TGCCTTGCTTGCTAGCTATT+TGG - Chr3:57146614-57146633 MsG0380014608.01.T01:intron 45.0%
! TTTGATGGGTCAGCTCTTTC+AGG - Chr3:57147665-57147684 MsG0380014608.01.T01:intron 45.0%
!! ACATGGATTTGAGGAGCGTT+TGG + Chr3:57152655-57152674 None:intergenic 45.0%
!! ACCATCCCGGTTTTTAGATG+AGG - Chr3:57150651-57150670 MsG0380014608.01.T01:intron 45.0%
!! GCATTCTTTCAGGTTGCATC+AGG - Chr3:57151391-57151410 MsG0380014608.01.T01:intron 45.0%
!! GCTATAGTGGTGCTATAGCA+CGG + Chr3:57151115-57151134 None:intergenic 45.0%
!! GTTGCAAAGCTTGTTGAGCT+AGG - Chr3:57152834-57152853 MsG0380014608.01.T01:intron 45.0%
!! GTTTGTGAGTTGGTTTGAGG+AGG + Chr3:57149625-57149644 None:intergenic 45.0%
!! TCACAAGGAGGTGTTTCTTC+TGG - Chr3:57151427-57151446 MsG0380014608.01.T01:intron 45.0%
!! TTGAGTTGGCCTAGTGGTAT+TGG - Chr3:57150272-57150291 MsG0380014608.01.T01:intron 45.0%
!! TTTTGGGTGTGTTTGCGAGT+TGG - Chr3:57149530-57149549 MsG0380014608.01.T01:intron 45.0%
!!! AATGTTTTGCGAGTTGGTGG+AGG - Chr3:57150465-57150484 MsG0380014608.01.T01:intron 45.0%
!!! AGTTGGTTTGAGGAGGGTTT+TGG + Chr3:57149618-57149637 None:intergenic 45.0%
!!! CTGTGCCATTTTTGCAAGGT+TGG - Chr3:57150496-57150515 MsG0380014608.01.T01:intron 45.0%
!! AAAAACAAATTTAATTATAT+GGG + Chr3:57151690-57151709 None:intergenic 5.0%
!! TATATTTAAAAAAAAACTAT+TGG + Chr3:57148428-57148447 None:intergenic 5.0%
!!! AAATCATTTTTATTTATTTT+TGG - Chr3:57151487-57151506 MsG0380014608.01.T01:intron 5.0%
!!! AATCATTTTTATTTATTTTT+GGG - Chr3:57151488-57151507 MsG0380014608.01.T01:intron 5.0%
!!! ATTTTTTTTAATAATGAAAA+AGG + Chr3:57152400-57152419 None:intergenic 5.0%
AAAGACTGCGCTGAGCGTTT+AGG - Chr3:57149068-57149087 MsG0380014608.01.T01:intron 50.0%
AAGACTGCGCTGAGCGTTTA+GGG - Chr3:57149069-57149088 MsG0380014608.01.T01:intron 50.0%
AAGCCTAACCAGCACTATCC+CGG + Chr3:57151626-57151645 None:intergenic 50.0%
ACCACTAGGCCAACTCAAGT+GGG + Chr3:57150270-57150289 None:intergenic 50.0%
AGGGTCTCTCTCTAGTTGAC+TGG - Chr3:57149653-57149672 MsG0380014608.01.T01:intron 50.0%
CACGCAAGTGCTTATACCAG+TGG + Chr3:57146712-57146731 None:intergenic 50.0%
CCCTTGTTCGTTCTTAGTGC+TGG - Chr3:57150135-57150154 MsG0380014608.01.T01:intron 50.0%
GAGTGGCCACATACCTTCAA+TGG + Chr3:57148885-57148904 None:intergenic 50.0%
GATCCCAAGCCAATACCACT+AGG + Chr3:57150284-57150303 None:intergenic 50.0%
GCAATGAGGAACAAGCAGCT+GGG - Chr3:57152901-57152920 MsG0380014608.01.T01:CDS 50.0%
GCCTCATCTAAAAACCGGGA+TGG + Chr3:57150655-57150674 None:intergenic 50.0%
GCTATAGCACGGTAGCATTG+CGG + Chr3:57151104-57151123 None:intergenic 50.0%
TACCACTAGGCCAACTCAAG+TGG + Chr3:57150271-57150290 None:intergenic 50.0%
TATGGCAACGCAGCAGAAGT+TGG + Chr3:57147227-57147246 None:intergenic 50.0%
TCCAAGGAAGCTTCAAGCTC+AGG - Chr3:57150682-57150701 MsG0380014608.01.T01:intron 50.0%
TCCTGAGCTTGAAGCTTCCT+TGG + Chr3:57150686-57150705 None:intergenic 50.0%
! AAGTGCTGCTGAAAAGCAGC+AGG + Chr3:57147630-57147649 None:intergenic 50.0%
! AGTGCTGCTGAAAAGCAGCA+GGG + Chr3:57147629-57147648 None:intergenic 50.0%
! CTCACCGGTGTCAATTTAGG+TGG - Chr3:57150341-57150360 MsG0380014608.01.T01:intron 50.0%
!! AGTGGTATTGGCTTGGGATC+TGG - Chr3:57150284-57150303 MsG0380014608.01.T01:intron 50.0%
!! GACTTTTTCCGGGATAGTGC+TGG - Chr3:57151615-57151634 MsG0380014608.01.T01:intron 50.0%
!! GGATATGCTCCGAAAGCATC+AGG - Chr3:57150189-57150208 MsG0380014608.01.T01:intron 50.0%
!! GTGGTATTGGCTTGGGATCT+GGG - Chr3:57150285-57150304 MsG0380014608.01.T01:intron 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG - Chr3:57150278-57150297 MsG0380014608.01.T01:intron 50.0%
!! TGGTTTGAGGAGGGTTTTGG+AGG + Chr3:57149615-57149634 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG - Chr3:57150277-57150296 MsG0380014608.01.T01:intron 50.0%
!! TTTCCGGGATAGTGCTGGTT+AGG - Chr3:57151620-57151639 MsG0380014608.01.T01:intron 50.0%
!!! GGTTTGAGGAGGGTTTTGGA+GGG + Chr3:57149614-57149633 None:intergenic 50.0%
ATACCTAGAAGCAGCAGCGC+CGG + Chr3:57146491-57146510 None:intergenic 55.0%
CACCGAGAACCCACTTGAGT+TGG - Chr3:57150258-57150277 MsG0380014608.01.T01:intron 55.0%
GGCAATGAGGAACAAGCAGC+TGG - Chr3:57152900-57152919 MsG0380014608.01.T01:CDS 55.0%
GTCTCGGGTTCGATTCTCAC+CGG - Chr3:57150326-57150345 MsG0380014608.01.T01:intron 55.0%
TAAACGGGCGGTCAAACCCA+AGG + Chr3:57146668-57146687 None:intergenic 55.0%
! GGCCAACTCAAGTGGGTTCT+CGG + Chr3:57150263-57150282 None:intergenic 55.0%
!! ACCCACTTGAGTTGGCCTAG+TGG - Chr3:57150266-57150285 MsG0380014608.01.T01:intron 55.0%
ATGATGACCGTCTCTGGCGC+TGG - Chr3:57146463-57146482 MsG0380014608.01.T01:intron 60.0%
GAATCGAACCCGAGACCTCG+AGG + Chr3:57150322-57150341 None:intergenic 60.0%
GAGCACACTGAGCTACAGCC+TGG + Chr3:57147096-57147115 None:intergenic 60.0%
GATTGAAGCTGCCATCCGCC+AGG - Chr3:57148236-57148255 MsG0380014608.01.T01:intron 60.0%
TGTGGTCCTCCTCGAGGTCT+CGG - Chr3:57150310-57150329 MsG0380014608.01.T01:intron 60.0%
! TGGCTTGGGATCTGGGAGTG+TGG - Chr3:57150292-57150311 MsG0380014608.01.T01:intron 60.0%
GTGGTCCTCCTCGAGGTCTC+GGG - Chr3:57150311-57150330 MsG0380014608.01.T01:intron 65.0%
TCGAACCCGAGACCTCGAGG+AGG + Chr3:57150319-57150338 None:intergenic 65.0%
! TGGGAGTGTGGTCCTCCTCG+AGG - Chr3:57150304-57150323 MsG0380014608.01.T01:intron 65.0%
! GTGCCGGCGCTGCTGCTTCT+AGG - Chr3:57146485-57146504 MsG0380014608.01.T01:intron 70.0%
!! ACCGTCTCTGGCGCTGGTGC+CGG - Chr3:57146469-57146488 MsG0380014608.01.T01:intron 70.0%
GCCGGCACCAGCGCCAGAGA+CGG + Chr3:57146473-57146492 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 57145698 57153120 57145698 ID=MsG0380014608.01;Name=MsG0380014608.01
Chr3 mRNA 57145698 57153120 57145698 ID=MsG0380014608.01.T01;Parent=MsG0380014608.01;Name=MsG0380014608.01.T01;_AED=0.40;_eAED=0.43;_QI=174|0.71|0.86|1|1|1|15|182|393
Chr3 exon 57145698 57146005 57145698 ID=MsG0380014608.01.T01:exon:4273;Parent=MsG0380014608.01.T01
Chr3 exon 57147006 57147028 57147006 ID=MsG0380014608.01.T01:exon:4272;Parent=MsG0380014608.01.T01
Chr3 exon 57147182 57147263 57147182 ID=MsG0380014608.01.T01:exon:4271;Parent=MsG0380014608.01.T01
Chr3 exon 57148101 57148177 57148101 ID=MsG0380014608.01.T01:exon:4270;Parent=MsG0380014608.01.T01
Chr3 exon 57148305 57148374 57148305 ID=MsG0380014608.01.T01:exon:4269;Parent=MsG0380014608.01.T01
Chr3 exon 57148923 57149016 57148923 ID=MsG0380014608.01.T01:exon:4268;Parent=MsG0380014608.01.T01
Chr3 exon 57149728 57149789 57149728 ID=MsG0380014608.01.T01:exon:4267;Parent=MsG0380014608.01.T01
Chr3 exon 57149928 57149972 57149928 ID=MsG0380014608.01.T01:exon:4266;Parent=MsG0380014608.01.T01
Chr3 exon 57150058 57150120 57150058 ID=MsG0380014608.01.T01:exon:4265;Parent=MsG0380014608.01.T01
Chr3 exon 57150561 57150626 57150561 ID=MsG0380014608.01.T01:exon:4264;Parent=MsG0380014608.01.T01
Chr3 exon 57150775 57150891 57150775 ID=MsG0380014608.01.T01:exon:4263;Parent=MsG0380014608.01.T01
Chr3 exon 57151132 57151240 57151132 ID=MsG0380014608.01.T01:exon:4262;Parent=MsG0380014608.01.T01
Chr3 exon 57152312 57152460 57152312 ID=MsG0380014608.01.T01:exon:4261;Parent=MsG0380014608.01.T01
Chr3 exon 57152759 57152791 57152759 ID=MsG0380014608.01.T01:exon:4260;Parent=MsG0380014608.01.T01
Chr3 exon 57152881 57153120 57152881 ID=MsG0380014608.01.T01:exon:4259;Parent=MsG0380014608.01.T01
Chr3 five_prime_UTR 57152947 57153120 57152947 ID=MsG0380014608.01.T01:five_prime_utr;Parent=MsG0380014608.01.T01
Chr3 CDS 57152881 57152946 57152881 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57152759 57152791 57152759 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57152312 57152460 57152312 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57151132 57151240 57151132 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57150775 57150891 57150775 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57150561 57150626 57150561 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57150058 57150120 57150058 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57149928 57149972 57149928 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57149728 57149789 57149728 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57148923 57149016 57148923 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57148305 57148374 57148305 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57148101 57148177 57148101 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57147182 57147263 57147182 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57147006 57147028 57147006 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 CDS 57145880 57146005 57145880 ID=MsG0380014608.01.T01:cds;Parent=MsG0380014608.01.T01
Chr3 three_prime_UTR 57145698 57145879 57145698 ID=MsG0380014608.01.T01:three_prime_utr;Parent=MsG0380014608.01.T01
Gene Sequence

>MsG0380014608.01.T01

ATGAAGATCACTGTCATGACTTCTGATGAACAAATTCTCAATTTGGATGTTGATCCCAACGAATCTGTGGAAAACGTTAAGGCATTACTTGAGGTTGAGAAGACAAGTGTGCCTATTCAGCAACAACAAATTCTGTTCAATGGGAATGAGGTGAGCAATTCTCAGAAATTGAGTGCACTTGGTGTTAAGGATGATGATTTGCTAATGATGACCGTCTCTGGCGCTGGTGCCGGCGCTGCTGCTTCTAGCGGATCTACCAATGATTTGAGCTTCAATACTGATGGATCTGCTATAAACCCTGCTGCTTTTCAGCAGCACTTTAGACGTGATTCTAATTTGATGGGTCAGCTCTTTCAGAATGATCCGGAGTTAGCACAAACTATTCTGGGCAATGATCTCAATAAAATCCAGGAAATTTTACGACTGCGTCATCGCCAAAGAAGTGAATTACAGCGTCAAAAAGAAGAAGAGTTGGCTCTTCTTTACGCAGATCCTTTTGATGTTGAAGCACAAAAGAAGATTGAAGCTGCCATCCGCCAGAAAGGAATTGATGACAATTGGGAAGCTGCACTTGAACACAATCCTGAAGCTTTTGCAAGAGTGGTCATGTTGTATGTTGACATGGAGGTTAATGGTGTACCATTGAAGGCATTTGTTGATAGTGGAGCACAGTCTACCATTATATCAAAAGACTGCGCTGAGCGTTTAGGATTGCTGCGACTTTTAGATCAGCGTTACAAAGGAATGGCTCATGGAGTTGGCCAAACCGAAATATTGGGTAGAATACATGTAGCTCCAATCAAGTGTATAATTGATTTGAAAGAAAATGTTTTGCGAGTTGGTGGAGGAGAAGTTTCTGTGCCATTTTTGCAAGAGAAAGACATACCATCCCGGTTTTTAGATGAGGCAAAGTATTCCAAGGAAGCTTCAAGCTCAGGAAGCCCACTTCGAAGGTTCATTCCACCAAACAATCTTTTTAGGCTTGCAATTCATCTTAATCCTAATAATAATGACTTTTTCCGGGATAGTGCTGGAGCTTCTGGTGACAAGTCTAAGGACTCTGAGTTTGAAAGCAAAGTTGCAAAGCTTGTTGAGCTAGGATTTGAAAGACAAGCAGTTATACAAGCTCTTCAATTATTCAATGGCAATGAGGAACAAGCAGCTGGGTTTCTTTTTGGGTGA
Protein sequence

>MsG0380014608.01.T01

MKITVMTSDEQILNLDVDPNESVENVKALLEVEKTSVPIQQQQILFNGNEVSNSQKLSALGVKDDDLLMMTVSGAGAGAAASSGSTNDLSFNTDGSAINPAAFQQHFRRDSNLMGQLFQNDPELAQTILGNDLNKIQEILRLRHRQRSELQRQKEEELALLYADPFDVEAQKKIEAAIRQKGIDDNWEAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKDCAERLGLLRLLDQRYKGMAHGVGQTEILGRIHVAPIKCIIDLKENVLRVGGGEVSVPFLQEKDIPSRFLDEAKYSKEASSSGSPLRRFIPPNNLFRLAIHLNPNNNDFFRDSAGASGDKSKDSEFESKVAKLVELGFERQAVIQALQLFNGNEEQAAGFLFG*