AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010823.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010823.01.T01 MTR_2g091175 98.810 168 2 0 1 168 201 368 6.57e-125 355
MsG0280010823.01.T01 MTR_4g079700 83.735 166 27 0 1 166 198 363 2.23e-107 311
MsG0280010823.01.T01 MTR_2g015720 61.677 167 63 1 1 166 192 358 4.93e-75 229
MsG0280010823.01.T01 MTR_4g087730 60.714 168 65 1 1 167 196 363 7.01e-74 226
MsG0280010823.01.T01 MTR_4g088030 60.355 169 64 2 1 167 184 351 4.50e-72 221
MsG0280010823.01.T01 MTR_2g073510 57.831 166 67 2 1 163 185 350 9.99e-65 202
MsG0280010823.01.T01 MTR_3g049330 52.353 170 78 2 1 167 182 351 4.82e-62 195
MsG0280010823.01.T01 MTR_3g021060 52.096 167 79 1 1 166 197 363 3.05e-60 191
MsG0280010823.01.T01 MTR_5g034810 52.071 169 78 2 2 167 185 353 2.78e-58 186
MsG0280010823.01.T01 MTR_3g035830 50.299 167 82 1 1 166 182 348 1.63e-57 183
MsG0280010823.01.T01 MTR_3g464570 47.541 183 80 3 1 167 91 273 3.75e-56 177
MsG0280010823.01.T01 MTR_3g021090 51.534 163 78 1 1 162 182 344 8.04e-56 181
MsG0280010823.01.T01 MTR_3g464570 47.541 183 80 3 1 167 195 377 1.24e-54 177
MsG0280010823.01.T01 MTR_5g071350 44.503 191 82 3 1 167 210 400 1.04e-53 175
MsG0280010823.01.T01 MTR_2g073500 46.429 168 78 3 2 167 189 346 1.49e-49 163
MsG0280010823.01.T01 MTR_0136s0010 42.938 177 89 2 2 167 335 510 9.43e-47 159
MsG0280010823.01.T01 MTR_7g093450 42.938 177 89 2 2 167 413 588 2.74e-46 159
MsG0280010823.01.T01 MTR_1g050448 41.573 178 85 4 1 166 205 375 1.03e-45 154
MsG0280010823.01.T01 MTR_4g121560 42.286 175 91 2 2 167 281 454 3.79e-45 154
MsG0280010823.01.T01 MTR_1g112210 38.202 178 92 3 1 166 198 369 5.68e-44 149
MsG0280010823.01.T01 MTR_1g112210 38.202 178 92 3 1 166 211 382 6.62e-44 149
MsG0280010823.01.T01 MTR_5g033800 39.548 177 95 2 2 167 309 484 2.04e-43 150
MsG0280010823.01.T01 MTR_8g069790 39.548 177 95 2 2 167 342 517 1.59e-42 148
MsG0280010823.01.T01 MTR_5g082880 41.398 186 90 6 2 168 328 513 1.19e-41 145
MsG0280010823.01.T01 MTR_4g126950 39.080 174 96 2 2 166 274 446 6.30e-41 143
MsG0280010823.01.T01 MTR_5g059400 37.989 179 96 4 2 167 340 516 1.03e-38 138
MsG0280010823.01.T01 MTR_1g116130 37.989 179 96 4 2 167 340 516 1.03e-38 138
MsG0280010823.01.T01 MTR_1g111010 42.604 169 83 4 2 168 187 343 1.09e-38 135
MsG0280010823.01.T01 MTR_3g070900 40.107 187 93 6 1 168 265 451 2.69e-37 133
MsG0280010823.01.T01 MTR_7g109550 40.476 168 88 4 2 162 301 463 9.84e-37 132
MsG0280010823.01.T01 MTR_1g058380 39.429 175 97 3 2 168 223 396 5.14e-35 126
MsG0280010823.01.T01 MTR_4g016940 35.165 182 101 4 2 166 246 427 1.37e-33 123
MsG0280010823.01.T01 MTR_3g021150 44.737 114 62 1 34 146 1 114 6.46e-31 108
MsG0280010823.01.T01 MTR_5g083260 36.413 184 100 4 1 167 242 425 5.94e-29 110
MsG0280010823.01.T01 MTR_3g071650 34.973 183 102 5 2 167 249 431 6.38e-29 110
MsG0280010823.01.T01 MTR_5g069320 36.416 173 72 5 1 159 238 386 7.51e-29 109
MsG0280010823.01.T01 MTR_4g014440 32.432 185 106 4 2 167 224 408 1.91e-28 108
MsG0280010823.01.T01 MTR_7g094750 36.313 179 99 4 2 167 257 433 2.35e-28 109
MsG0280010823.01.T01 MTR_7g070060 33.871 186 104 5 2 168 124 309 9.99e-28 105
MsG0280010823.01.T01 MTR_2g022560 36.872 179 97 5 2 167 263 438 1.15e-27 107
MsG0280010823.01.T01 MTR_7g070060 33.871 186 104 5 2 168 226 411 4.16e-27 105
MsG0280010823.01.T01 MTR_7g068920 35.519 183 101 4 1 166 239 421 1.09e-26 104
MsG0280010823.01.T01 MTR_8g463790 34.595 185 99 6 1 167 230 410 2.27e-26 103
MsG0280010823.01.T01 MTR_4g014430 35.593 177 96 6 2 162 268 442 5.24e-26 102
MsG0280010823.01.T01 MTR_3g090120 35.928 167 101 3 2 167 299 460 9.08e-25 99.8
MsG0280010823.01.T01 MTR_8g093530 30.539 167 110 3 2 167 256 417 8.88e-22 90.9
MsG0280010823.01.T01 MTR_6g016240 33.908 174 99 6 2 162 242 412 8.52e-20 85.5
MsG0280010823.01.T01 MTR_8g093870 33.523 176 98 9 2 166 305 472 8.32e-17 77.0
MsG0280010823.01.T01 MTR_5g033800 43.662 71 40 0 2 72 309 379 1.28e-15 73.6
MsG0280010823.01.T01 MTR_4g092830 30.168 179 103 7 2 162 214 388 1.77e-14 70.5
MsG0280010823.01.T01 MTR_4g125060 34.857 175 97 11 2 166 372 539 1.11e-13 68.2
MsG0280010823.01.T01 MTR_4g125060 34.857 175 97 11 2 166 343 510 1.19e-13 68.2
MsG0280010823.01.T01 MTR_4g125060 34.857 175 97 11 2 166 304 471 1.56e-13 67.8
MsG0280010823.01.T01 MTR_3g021080 31.683 101 49 2 68 167 99 180 1.07e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010823.01.T01 AT2G31110 65.868 167 56 1 1 166 48 214 5.09e-89 259
MsG0280010823.01.T01 AT2G42570 67.857 168 53 1 1 167 198 365 5.41e-88 262
MsG0280010823.01.T01 AT2G31110 65.868 167 56 1 1 166 196 362 1.37e-87 261
MsG0280010823.01.T01 AT1G29050 65.060 166 58 0 1 166 213 378 2.98e-80 243
MsG0280010823.01.T01 AT2G34070 61.677 167 63 1 1 166 83 249 2.36e-75 226
MsG0280010823.01.T01 AT2G34070 61.677 167 63 1 1 166 217 383 1.57e-73 226
MsG0280010823.01.T01 AT1G78710 50.000 168 82 1 2 167 190 357 6.63e-60 190
MsG0280010823.01.T01 AT3G14850 51.497 167 77 2 1 163 82 248 6.04e-59 184
MsG0280010823.01.T01 AT3G14850 51.497 167 77 2 1 163 185 351 1.37e-57 184
MsG0280010823.01.T01 AT2G30900 48.824 170 83 2 2 167 197 366 3.73e-57 183
MsG0280010823.01.T01 AT5G58600 45.604 182 83 3 2 167 220 401 2.48e-51 169
MsG0280010823.01.T01 AT2G30010 43.011 186 86 3 2 167 212 397 3.91e-48 160
MsG0280010823.01.T01 AT2G30010 43.011 186 86 3 2 167 255 440 5.95e-48 161
MsG0280010823.01.T01 AT5G06700 45.763 177 84 2 2 167 420 595 6.85e-48 164
MsG0280010823.01.T01 AT3G12060 44.633 177 86 2 2 167 361 536 9.02e-47 160
MsG0280010823.01.T01 AT3G54260 40.331 181 86 3 1 167 203 375 6.69e-43 146
MsG0280010823.01.T01 AT5G49340 39.548 177 95 2 2 167 267 442 1.66e-41 144
MsG0280010823.01.T01 AT1G60790 39.888 178 94 3 2 167 357 533 5.29e-41 144
MsG0280010823.01.T01 AT5G20590 38.857 175 97 2 2 167 307 480 5.99e-40 140
MsG0280010823.01.T01 AT3G62390 41.040 173 93 3 2 167 302 472 7.53e-39 137
MsG0280010823.01.T01 AT3G11570 40.000 175 96 3 2 168 248 421 1.88e-36 130
MsG0280010823.01.T01 AT5G06230 39.655 174 96 3 2 167 193 365 5.37e-34 123
MsG0280010823.01.T01 AT5G06230 39.429 175 97 3 2 168 234 407 9.87e-34 123
MsG0280010823.01.T01 AT2G40160 35.638 188 98 6 2 167 238 424 1.78e-33 123
MsG0280010823.01.T01 AT2G40160 36.066 183 94 6 2 162 238 419 2.57e-33 122
MsG0280010823.01.T01 AT3G55990 36.898 187 99 6 1 168 299 485 4.17e-33 122
MsG0280010823.01.T01 AT2G40150 34.197 193 102 5 1 168 230 422 2.28e-31 117
MsG0280010823.01.T01 AT5G01360 34.973 183 101 4 2 166 196 378 2.19e-30 114
MsG0280010823.01.T01 AT5G01360 34.973 183 101 4 2 166 252 434 4.01e-30 114
MsG0280010823.01.T01 AT2G31110 67.188 64 21 0 1 64 196 259 8.76e-30 110
MsG0280010823.01.T01 AT3G06080 36.364 176 98 4 2 164 269 443 9.45e-30 113
MsG0280010823.01.T01 AT5G19160 35.714 182 94 5 2 164 265 442 4.23e-29 111
MsG0280010823.01.T01 AT3G11030 34.783 184 102 4 2 167 266 449 1.15e-28 110
MsG0280010823.01.T01 AT5G01620 32.768 177 101 5 2 162 279 453 9.15e-27 105
MsG0280010823.01.T01 AT5G01620 32.768 177 101 5 2 162 271 445 1.03e-26 104
MsG0280010823.01.T01 AT5G01620 32.768 177 101 5 2 162 271 445 1.03e-26 104
MsG0280010823.01.T01 AT1G78710 33.929 168 56 2 2 167 183 297 1.29e-26 102
MsG0280010823.01.T01 AT1G73140 35.676 185 97 5 1 167 226 406 2.16e-26 103
MsG0280010823.01.T01 AT2G40320 33.696 184 105 5 1 167 240 423 5.04e-26 102
MsG0280010823.01.T01 AT2G38320 29.255 188 108 4 2 167 138 322 3.53e-25 99.0
MsG0280010823.01.T01 AT2G38320 30.270 185 110 4 2 167 221 405 8.80e-25 99.4
MsG0280010823.01.T01 AT5G58600 55.714 70 31 0 2 71 220 289 4.13e-23 93.2
MsG0280010823.01.T01 AT2G30900 48.780 82 36 1 2 83 197 272 7.25e-23 92.0
MsG0280010823.01.T01 AT1G48880 33.526 173 95 4 2 167 281 440 3.46e-22 92.4
MsG0280010823.01.T01 AT2G14530 31.844 179 105 6 2 166 231 406 4.54e-20 86.3
MsG0280010823.01.T01 AT5G64470 29.545 176 112 5 2 167 222 395 2.06e-17 78.6
MsG0280010823.01.T01 AT5G64470 29.670 182 110 6 2 167 222 401 2.39e-16 75.9
MsG0280010823.01.T01 AT3G62390 41.096 73 43 0 2 74 302 374 7.28e-15 71.6
MsG0280010823.01.T01 AT5G20590 42.254 71 41 0 2 72 307 377 1.32e-14 70.5
MsG0280010823.01.T01 AT5G64020 31.183 186 101 9 2 166 229 408 1.37e-14 70.9
MsG0280010823.01.T01 AT5G20680 31.638 177 102 8 1 166 289 457 1.27e-13 68.2
MsG0280010823.01.T01 AT5G20680 32.768 177 100 9 1 166 365 533 1.78e-13 67.8
MsG0280010823.01.T01 AT5G20680 31.638 177 102 8 1 166 383 551 1.90e-13 67.4
MsG0280010823.01.T01 AT5G20680 31.638 177 102 8 1 166 383 551 1.90e-13 67.4
MsG0280010823.01.T01 AT5G20680 31.638 177 102 8 1 166 383 551 1.90e-13 67.4
MsG0280010823.01.T01 AT5G20680 31.638 177 102 8 1 166 383 551 1.90e-13 67.4
MsG0280010823.01.T01 AT5G06230 45.833 72 39 0 2 73 234 305 9.82e-13 65.1
MsG0280010823.01.T01 AT1G70230 27.869 183 106 6 2 166 237 411 2.98e-11 61.2

Find 87 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTCATGCAGCTCTCTT+TGG 0.210145 2:-75464421 MsG0280010823.01.T01:CDS
TCTATTCCGCACACCATATT+TGG 0.219542 2:-75465527 MsG0280010823.01.T01:five_prime_UTR
TTGTAATTGGATAATAAAAT+TGG 0.234987 2:-75464291 MsG0280010823.01.T01:three_prime_UTR
TATCTCCACAATAACATTTC+AGG 0.240854 2:-75468320 MsG0280010823.01.T01:intron
TACAACAAAACATTATAAAA+AGG 0.250704 2:-75469101 MsG0280010823.01.T01:five_prime_UTR
AGAGAAACACAACCATTCTT+TGG 0.302957 2:-75464646 MsG0280010823.01.T01:CDS
CGGTCAAGGTCTACCAAATA+TGG 0.307611 2:+75465514 None:intergenic
GTTTGACAACTTGGGCTAGA+TGG 0.309964 2:-75465213 MsG0280010823.01.T01:CDS
CTTTGGTTGAAGAAGTGAAT+TGG 0.315943 2:-75464404 MsG0280010823.01.T01:exon
TAGCATGTATGATTCATTCT+TGG 0.316438 2:-75468381 MsG0280010823.01.T01:five_prime_UTR
TGTAGTCATTGGTGTCTTCC+AGG 0.323483 2:-75464466 MsG0280010823.01.T01:CDS
CAATGCAAAGAACCTTCCTT+TGG 0.334400 2:-75464194 None:intergenic
GTGTGCGGAATAGAAATAAT+TGG 0.347634 2:+75465536 None:intergenic
CAAGCCATTGGTGTTCCTGC+TGG 0.351195 2:+75464613 None:intergenic
AGAAGAACATTCCAAGTATC+AGG 0.357411 2:+75464439 None:intergenic
TCTACAAAGGTTTGACAACT+TGG 0.371927 2:-75465222 MsG0280010823.01.T01:CDS
TTCCAGGACTTCCTGATACT+TGG 0.372897 2:-75464450 MsG0280010823.01.T01:CDS
TGTAATGGTTTCGTGGCAAA+TGG 0.390946 2:-75468871 MsG0280010823.01.T01:five_prime_UTR
CAATTCAATTGTCAAAAGTA+TGG 0.391925 2:-75468792 MsG0280010823.01.T01:five_prime_UTR
TATTTCTGATACTGAGTATC+AGG 0.397938 2:+75468765 None:intergenic
AGCATGTATGATTCATTCTT+GGG 0.407416 2:-75468380 MsG0280010823.01.T01:five_prime_UTR
AAGAAGACCTTGGTTTGAGC+TGG 0.426020 2:+75465172 None:intergenic
GTTTCGATCCTCTCTGTTGA+AGG 0.431671 2:+75469039 None:intergenic
CTCAGTATCAGAAATATAGA+TGG 0.444563 2:-75468758 MsG0280010823.01.T01:five_prime_UTR
TGCCAACAGATTGTAGTCAT+TGG 0.444942 2:-75464477 MsG0280010823.01.T01:CDS
TTCCTATGGTAGAAAACAAT+GGG 0.449400 2:+75464342 None:intergenic
ATCCTCTCTGTTGAAGGAAA+AGG 0.451476 2:+75469045 None:intergenic
ACCATAGGAATTATTTAACT+TGG 0.452262 2:-75464329 MsG0280010823.01.T01:three_prime_UTR
AGCAGGAACACCAATGGCTT+GGG 0.468530 2:-75464611 MsG0280010823.01.T01:CDS
TACATGCTAGTGAATTGAAC+TGG 0.471439 2:+75468395 None:intergenic
TTCACTATTACCCAAGCCAT+TGG 0.475251 2:+75464601 None:intergenic
TTTGACAACTTGGGCTAGAT+GGG 0.479154 2:-75465212 MsG0280010823.01.T01:CDS
ATAACACTACTATACCCTTC+TGG 0.481855 2:+75464499 None:intergenic
ATATGTTTCTTAATTAGTCC+AGG 0.487004 2:-75464369 MsG0280010823.01.T01:three_prime_UTR
TTCCAAGTATCAGGAAGTCC+TGG 0.489986 2:+75464448 None:intergenic
GCCAAGTTAAATAATTCCTA+TGG 0.499275 2:+75464328 None:intergenic
AAGCCATTGGTGTTCCTGCT+GGG 0.502968 2:+75464614 None:intergenic
CAGCAGGAACACCAATGGCT+TGG 0.504711 2:-75464612 MsG0280010823.01.T01:CDS
ACATTGGCGTGTTCTAAAGT+TGG 0.509126 2:-75465486 MsG0280010823.01.T01:five_prime_UTR
AAACTCGCTGGAAGATGTAA+TGG 0.509427 2:-75468886 MsG0280010823.01.T01:five_prime_UTR
CGGTTGTGCATTTCCAGTGT+GGG 0.509875 2:+75465394 None:intergenic
ATGGAGAGGAATGGATGTAT+TGG 0.512382 2:-75465441 MsG0280010823.01.T01:exon
GAGGATCGAAACCCAAGAAA+AGG 0.513558 2:-75469028 MsG0280010823.01.T01:five_prime_UTR
CTTTGTAGAACGCAATGAAA+CGG 0.518428 2:+75465236 None:intergenic
AATTGAATTGTGGATCTATG+AGG 0.521173 2:+75468805 None:intergenic
CTCATTACTAGTACTGGAAA+CGG 0.528540 2:+75468912 None:intergenic
CGTTTCATTGCGTTCTACAA+AGG 0.529142 2:-75465235 MsG0280010823.01.T01:CDS
GATAGCACTTTGCTTTGAGA+AGG 0.530854 2:+75468339 None:intergenic
CTACAAAGGTTTGACAACTT+GGG 0.543154 2:-75465221 MsG0280010823.01.T01:CDS
TGGCATTGGTGGACCCACAC+TGG 0.546946 2:-75465407 MsG0280010823.01.T01:CDS
TGGAAGATGTAATGGTTTCG+TGG 0.549059 2:-75468878 MsG0280010823.01.T01:five_prime_UTR
ATTCCTATGGTAGAAAACAA+TGG 0.552378 2:+75464341 None:intergenic
ATCTATGAGGGACAAGAAGA+AGG 0.552625 2:+75468818 None:intergenic
GGTAGTTGTTGCTGTTGTGT+TGG 0.556553 2:+75468933 None:intergenic
GAAAAGATGCACATCCAGAA+GGG 0.559145 2:-75464513 MsG0280010823.01.T01:CDS
TTTGGTTTGAAGTACCCAGC+AGG 0.566621 2:-75464628 MsG0280010823.01.T01:CDS
TGAAGAAGTGAATTGGAAAG+TGG 0.568982 2:-75464397 MsG0280010823.01.T01:three_prime_UTR
GTAATGGTTTCGTGGCAAAT+GGG 0.569782 2:-75468870 MsG0280010823.01.T01:five_prime_UTR
GGATCATAGAGAGGATACGA+AGG 0.570131 2:+75468839 None:intergenic
GGGTACTTCAAACCAAAGAA+TGG 0.571214 2:+75464634 None:intergenic
CCACGTTATATTCCAAAGGA+AGG 0.573519 2:+75464182 None:intergenic
CTTTCACTTGTTCTATACCA+AGG 0.575010 2:-75468731 MsG0280010823.01.T01:intron
ACTAACCTGAAATGTTATTG+TGG 0.576103 2:+75468315 None:intergenic
CGCCAATGTTCTCACGGTCA+AGG 0.576681 2:+75465500 None:intergenic
CAATAAAGAGTGGTAATGCA+TGG 0.581612 2:-75465460 MsG0280010823.01.T01:five_prime_UTR
ACGGTTGTGCATTTCCAGTG+TGG 0.583332 2:+75465393 None:intergenic
AGAAAAGATGCACATCCAGA+AGG 0.583703 2:-75464514 MsG0280010823.01.T01:CDS
TGGTAATGCATGGAGAGGAA+TGG 0.587257 2:-75465450 MsG0280010823.01.T01:exon
CACCAATGACTACAATCTGT+TGG 0.588126 2:+75464475 None:intergenic
AAGAGTGGTAATGCATGGAG+AGG 0.592479 2:-75465455 MsG0280010823.01.T01:five_prime_UTR
CAGATGGGATTATATTCAAG+AGG 0.594517 2:-75465284 MsG0280010823.01.T01:CDS
AGTAATGAGAGAAAACTCGC+TGG 0.595143 2:-75468898 MsG0280010823.01.T01:five_prime_UTR
ACAACTTACTCGTAATGCAC+AGG 0.597709 2:+75465136 None:intergenic
TGTAAATCCAGCTCAAACCA+AGG 0.609530 2:-75465179 MsG0280010823.01.T01:CDS
ATTGAATTGTGGATCTATGA+GGG 0.615267 2:+75468806 None:intergenic
GACCTTGACCGTGAGAACAT+TGG 0.620716 2:-75465502 MsG0280010823.01.T01:five_prime_UTR
CTTGGTATAGAACAAGTGAA+AGG 0.623660 2:+75468732 None:intergenic
AGAACACGCCAATGTTCTCA+CGG 0.628269 2:+75465494 None:intergenic
TTATATTCAAGAGGGTGGCA+AGG 0.635985 2:-75465275 MsG0280010823.01.T01:CDS
TGGGATTATATTCAAGAGGG+TGG 0.638991 2:-75465280 MsG0280010823.01.T01:CDS
CAAGAAGAAGGATCATAGAG+AGG 0.640153 2:+75468830 None:intergenic
GTACCCAGCAGGAACACCAA+TGG 0.661011 2:-75464617 MsG0280010823.01.T01:CDS
AGATGGGATTATATTCAAGA+GGG 0.662305 2:-75465283 MsG0280010823.01.T01:CDS
GGTCTACCAAATATGGTGTG+CGG 0.672109 2:+75465521 None:intergenic
GATCATAGAGAGGATACGAA+GGG 0.672935 2:+75468840 None:intergenic
GTCACATCTAGAAAATACAC+TGG 0.675733 2:+75464553 None:intergenic
AAGTTGGACTCAATAAAGAG+TGG 0.679146 2:-75465470 MsG0280010823.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATATATTTATTCATTAT+AGG - Chr2:75467145-75467164 MsG0280010823.01.T01:intron 10.0%
!! ATTTAAAAATACATTTATTG+GGG - Chr2:75465530-75465549 MsG0280010823.01.T01:five_prime_UTR 10.0%
!! TTTATCAACTATATTTATAA+TGG - Chr2:75468581-75468600 MsG0280010823.01.T01:intron 10.0%
!!! ATAATTATTTGAATATTTTC+AGG - Chr2:75467740-75467759 MsG0280010823.01.T01:intron 10.0%
!!! CATATTTAATTTATCTTTTT+TGG - Chr2:75465643-75465662 MsG0280010823.01.T01:intron 10.0%
!!! TGTAAATTTTCATATTATTT+TGG - Chr2:75469064-75469083 MsG0280010823.01.T01:five_prime_UTR 10.0%
!!! TTTAAAATATATCGAATATT+TGG + Chr2:75465749-75465768 None:intergenic 10.0%
!! AATATAAATTACTAGAAGAA+AGG + Chr2:75467417-75467436 None:intergenic 15.0%
!! ACAAAAAATAAAATTTGAAG+TGG - Chr2:75467084-75467103 MsG0280010823.01.T01:intron 15.0%
!! AGAATAATACAATATTAGTA+TGG - Chr2:75466063-75466082 MsG0280010823.01.T01:intron 15.0%
!! ATGTACAATTATTATATGTA+AGG - Chr2:75467570-75467589 MsG0280010823.01.T01:intron 15.0%
!! CAGTAAAATAAATAATTTAG+TGG - Chr2:75466037-75466056 MsG0280010823.01.T01:intron 15.0%
!! TACAACAAAACATTATAAAA+AGG - Chr2:75464208-75464227 MsG0280010823.01.T01:three_prime_UTR 15.0%
!! TATTAGTGTTATATTGTATT+GGG + Chr2:75466816-75466835 None:intergenic 15.0%
!! TTATTAGTGTTATATTGTAT+TGG + Chr2:75466817-75466836 None:intergenic 15.0%
!! TTGTAATTGGATAATAAAAT+TGG - Chr2:75469018-75469037 MsG0280010823.01.T01:five_prime_UTR 15.0%
!! TTTAAAAATACATTTATTGG+GGG - Chr2:75465531-75465550 MsG0280010823.01.T01:five_prime_UTR 15.0%
!!! AACTTTTATAAATCATTTGA+CGG + Chr2:75467623-75467642 None:intergenic 15.0%
!!! AATGTTTTTTTACAGAATTA+CGG - Chr2:75468244-75468263 MsG0280010823.01.T01:intron 15.0%
!!! ATGATTAATAGTTGATTTAA+AGG - Chr2:75465946-75465965 MsG0280010823.01.T01:intron 15.0%
!!! ATTTTTATTATTTTCCATGT+TGG - Chr2:75465275-75465294 MsG0280010823.01.T01:CDS 15.0%
!!! CAAAAAATAAAATTTGAAGT+GGG - Chr2:75467085-75467104 MsG0280010823.01.T01:intron 15.0%
!!! TTTGATACTTTTGAATTTAA+TGG - Chr2:75465056-75465075 MsG0280010823.01.T01:intron 15.0%
!!! TTTTGAGTTATTATTGTAAT+TGG - Chr2:75469005-75469024 MsG0280010823.01.T01:five_prime_UTR 15.0%
!! AAAGAAATCATTAGAATGTT+TGG - Chr2:75468368-75468387 MsG0280010823.01.T01:five_prime_UTR 20.0%
!! AAAGTGGAATATATTGTATT+GGG + Chr2:75466856-75466875 None:intergenic 20.0%
!! AAGAAAATGCACTATATATT+AGG + Chr2:75466202-75466221 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + Chr2:75466784-75466803 None:intergenic 20.0%
!! ATAAAACTTAGTCTAGTAAT+TGG + Chr2:75468566-75468585 None:intergenic 20.0%
!! ATAGTGCAAATATTCTAAAT+AGG - Chr2:75466582-75466601 MsG0280010823.01.T01:intron 20.0%
!! ATTACTATCTATTATTACCA+TGG + Chr2:75465457-75465476 None:intergenic 20.0%
!! ATTTGAAGAAAAACAAAACA+TGG + Chr2:75465201-75465220 None:intergenic 20.0%
!! CATAATCAATTCTGTTATTA+AGG - Chr2:75467963-75467982 MsG0280010823.01.T01:intron 20.0%
!! GCTATTCACATTAAAAAAAT+AGG - Chr2:75467030-75467049 MsG0280010823.01.T01:intron 20.0%
!! GTAAAAAAAGATACAAACTA+GGG - Chr2:75466085-75466104 MsG0280010823.01.T01:intron 20.0%
!! GTACTACAATTTAATTCATA+TGG + Chr2:75467111-75467130 None:intergenic 20.0%
!! GTATGATATTTGGTAAATTA+GGG - Chr2:75468605-75468624 MsG0280010823.01.T01:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + Chr2:75466783-75466802 None:intergenic 20.0%
!! TATGATATTTGGTAAATTAG+GGG - Chr2:75468606-75468625 MsG0280010823.01.T01:intron 20.0%
!! TCCTAAAGTTTCTATATAAA+GGG + Chr2:75466286-75466305 None:intergenic 20.0%
!! TGATCATTACAGTTTAAAAA+GGG + Chr2:75466689-75466708 None:intergenic 20.0%
!! TGTATGATATTTGGTAAATT+AGG - Chr2:75468604-75468623 MsG0280010823.01.T01:intron 20.0%
!! TTAAAAATACATTTATTGGG+GGG - Chr2:75465532-75465551 MsG0280010823.01.T01:five_prime_UTR 20.0%
!! TTAGAAAATGAAAATGTGTT+TGG - Chr2:75464806-75464825 MsG0280010823.01.T01:intron 20.0%
!! TTATAATGGTGTATGATATT+TGG - Chr2:75468595-75468614 MsG0280010823.01.T01:intron 20.0%
!! TTCCTAAAGTTTCTATATAA+AGG + Chr2:75466287-75466306 None:intergenic 20.0%
!! TTCTAGTAATTTATATTCCA+TGG - Chr2:75467420-75467439 MsG0280010823.01.T01:intron 20.0%
!! TTGATCATTACAGTTTAAAA+AGG + Chr2:75466690-75466709 None:intergenic 20.0%
!! TTTAAATTTCAGTAGAATCA+GGG - Chr2:75468281-75468300 MsG0280010823.01.T01:intron 20.0%
!! TTTATGAAAAAACTATACCA+TGG + Chr2:75465429-75465448 None:intergenic 20.0%
!! TTTGAAGAAAAACAAAACAT+GGG + Chr2:75465200-75465219 None:intergenic 20.0%
!!! AAATTATGTTGGTTATGTTT+TGG - Chr2:75465084-75465103 MsG0280010823.01.T01:intron 20.0%
!!! AAGAAAAGTGTATAAATGAA+GGG + Chr2:75466880-75466899 None:intergenic 20.0%
!!! AATGTGTTTGGTATTTTTTT+AGG - Chr2:75464818-75464837 MsG0280010823.01.T01:intron 20.0%
!!! CTTCAATACAAATTTCATTT+TGG + Chr2:75465925-75465944 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + Chr2:75466747-75466766 None:intergenic 20.0%
!!! GATCATGAATATACTTTTAT+TGG + Chr2:75466245-75466264 None:intergenic 20.0%
!!! TAAGAAAAGTGTATAAATGA+AGG + Chr2:75466881-75466900 None:intergenic 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG + Chr2:75466425-75466444 None:intergenic 20.0%
!!! TTTGAATATTTTCAGGATTA+TGG - Chr2:75467747-75467766 MsG0280010823.01.T01:intron 20.0%
!!! TTTTAAATTTCAGTAGAATC+AGG - Chr2:75468280-75468299 MsG0280010823.01.T01:intron 20.0%
!!! TTTTTTCATAAAAAATGCCA+TGG - Chr2:75465437-75465456 MsG0280010823.01.T01:exon 20.0%
! AAAAGATAATCCCTTCAAAA+TGG - Chr2:75467268-75467287 MsG0280010823.01.T01:intron 25.0%
! AACAGAATTGATTATGATCA+TGG + Chr2:75467959-75467978 None:intergenic 25.0%
! AAGTTTCTATATAAAGGGAA+AGG + Chr2:75466281-75466300 None:intergenic 25.0%
! AATCAATTCTGTTATTAAGG+AGG - Chr2:75467966-75467985 MsG0280010823.01.T01:intron 25.0%
! ACCATAGGAATTATTTAACT+TGG - Chr2:75468980-75468999 MsG0280010823.01.T01:five_prime_UTR 25.0%
! ACTCAATAAAGTTTCCAATT+AGG + Chr2:75465161-75465180 None:intergenic 25.0%
! ATAGAACACCAAATATAAGA+CGG + Chr2:75465881-75465900 None:intergenic 25.0%
! ATATGTTTCTTAATTAGTCC+AGG - Chr2:75468940-75468959 MsG0280010823.01.T01:five_prime_UTR 25.0%
! ATGATATTTGGTAAATTAGG+GGG - Chr2:75468607-75468626 MsG0280010823.01.T01:intron 25.0%
! CAATTCAATTGTCAAAAGTA+TGG - Chr2:75464517-75464536 MsG0280010823.01.T01:CDS 25.0%
! CTAAATAGGTCAAGTAATAT+GGG - Chr2:75466596-75466615 MsG0280010823.01.T01:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG + Chr2:75466857-75466876 None:intergenic 25.0%
! GATCATTACAGTTTAAAAAG+GGG + Chr2:75466688-75466707 None:intergenic 25.0%
! GGTAAAAAAAGATACAAACT+AGG - Chr2:75466084-75466103 MsG0280010823.01.T01:intron 25.0%
! GTAAATGATAGTAATAACCA+TGG + Chr2:75465401-75465420 None:intergenic 25.0%
! TAAGTAGCTAGTATAATGTT+TGG + Chr2:75464733-75464752 None:intergenic 25.0%
! TAATAAATGTGAATCTTCCA+TGG - Chr2:75465381-75465400 MsG0280010823.01.T01:intron 25.0%
! TCCCTTTATATAGAAACTTT+AGG - Chr2:75466282-75466301 MsG0280010823.01.T01:intron 25.0%
! TCTAAATAGGTCAAGTAATA+TGG - Chr2:75466595-75466614 MsG0280010823.01.T01:intron 25.0%
! TTATATTGTATTGGGAATGA+TGG + Chr2:75466808-75466827 None:intergenic 25.0%
! TTGATTGATGCTTATATCAA+GGG + Chr2:75467010-75467029 None:intergenic 25.0%
!! AACATATTTTCCTCTTACAA+AGG - Chr2:75465491-75465510 MsG0280010823.01.T01:five_prime_UTR 25.0%
!! AGAAAAGTGTATAAATGAAG+GGG + Chr2:75466879-75466898 None:intergenic 25.0%
!! CTCTAAATTTTACAAATTCG+TGG + Chr2:75468429-75468448 None:intergenic 25.0%
!! GTTTTTAAATCCTTTGTAAG+AGG + Chr2:75465504-75465523 None:intergenic 25.0%
!! TAAATTCAAGAGCTTTTGTT+TGG + Chr2:75464353-75464372 None:intergenic 25.0%
!! TAAATTTTACAAATTCGTGG+TGG + Chr2:75468426-75468445 None:intergenic 25.0%
!! TAATGGTAGTGAAATTATGT+TGG - Chr2:75465073-75465092 MsG0280010823.01.T01:intron 25.0%
!! TACTTTTGACAATTGAATTG+TGG + Chr2:75464517-75464536 None:intergenic 25.0%
!! TTAGTGAATGTTTTGTACTA+TGG + Chr2:75468471-75468490 None:intergenic 25.0%
!! TTATTCTTTAAAAATGTCCC+CGG + Chr2:75465364-75465383 None:intergenic 25.0%
!! TTCATTTTCATTGAAACTAG+AGG - Chr2:75467448-75467467 MsG0280010823.01.T01:intron 25.0%
!! TTTTTGTTCTATTGAGAACA+AGG + Chr2:75467071-75467090 None:intergenic 25.0%
!!! ACAAAAGTGTCACAAAATAT+TGG - Chr2:75467361-75467380 MsG0280010823.01.T01:intron 25.0%
!!! CAAAAGTGTCACAAAATATT+GGG - Chr2:75467362-75467381 MsG0280010823.01.T01:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + Chr2:75466748-75466767 None:intergenic 25.0%
!!! TTTGAAGGGATTATCTTTTT+TGG + Chr2:75467267-75467286 None:intergenic 25.0%
!!! TTTTTTTAGGTTCAATGCAT+TGG - Chr2:75464831-75464850 MsG0280010823.01.T01:intron 25.0%
AAAAAACTATACCATGGCAA+TGG + Chr2:75465423-75465442 None:intergenic 30.0%
AACAGAAGCTATGATAGAAA+TGG + Chr2:75464619-75464638 None:intergenic 30.0%
AATTCCTAAAAAGAAGACCT+TGG + Chr2:75468150-75468169 None:intergenic 30.0%
AATTGAATTGTGGATCTATG+AGG + Chr2:75464507-75464526 None:intergenic 30.0%
ACTAACCTGAAATGTTATTG+TGG + Chr2:75464997-75465016 None:intergenic 30.0%
AGAAAATAGACATCACTGAA+AGG - Chr2:75467472-75467491 MsG0280010823.01.T01:intron 30.0%
AGAATTAAGTGACTCAAAGT+AGG - Chr2:75464676-75464695 MsG0280010823.01.T01:CDS 30.0%
AGATGGGATTATATTCAAGA+GGG - Chr2:75468026-75468045 MsG0280010823.01.T01:intron 30.0%
AGCATGTATGATTCATTCTT+GGG - Chr2:75464929-75464948 MsG0280010823.01.T01:intron 30.0%
ATTCCTATGGTAGAAAACAA+TGG + Chr2:75468971-75468990 None:intergenic 30.0%
ATTGAATTGTGGATCTATGA+GGG + Chr2:75464506-75464525 None:intergenic 30.0%
CTCAGTATCAGAAATATAGA+TGG - Chr2:75464551-75464570 MsG0280010823.01.T01:CDS 30.0%
CTTGATTGATGCTTATATCA+AGG + Chr2:75467011-75467030 None:intergenic 30.0%
GAAGAAAAGAAAAACAGAGT+CGG + Chr2:75464317-75464336 None:intergenic 30.0%
GAGTAAATCTATCAGAATCA+CGG + Chr2:75464705-75464724 None:intergenic 30.0%
GCCAAGTTAAATAATTCCTA+TGG + Chr2:75468984-75469003 None:intergenic 30.0%
GGGAAAAAGATTATGTTTGT+TGG - Chr2:75464873-75464892 MsG0280010823.01.T01:intron 30.0%
GGTGTTAAATATAGATCCTA+CGG + Chr2:75467938-75467957 None:intergenic 30.0%
GTGAGCAATAAAGTATGAAA+CGG - Chr2:75465314-75465333 MsG0280010823.01.T01:intron 30.0%
TACTTTGAGTCACTTAATTC+TGG + Chr2:75464677-75464696 None:intergenic 30.0%
TAGCATGTATGATTCATTCT+TGG - Chr2:75464928-75464947 MsG0280010823.01.T01:intron 30.0%
TATCTCCACAATAACATTTC+AGG - Chr2:75464989-75465008 MsG0280010823.01.T01:intron 30.0%
TGAGCAATAAAGTATGAAAC+GGG - Chr2:75465315-75465334 MsG0280010823.01.T01:intron 30.0%
TGTTAGATTTAGTGTAGGTT+TGG - Chr2:75464635-75464654 MsG0280010823.01.T01:CDS 30.0%
TTAAGCGATTAAGCTCTATT+CGG - Chr2:75466146-75466165 MsG0280010823.01.T01:intron 30.0%
TTCCTATGGTAGAAAACAAT+GGG + Chr2:75468970-75468989 None:intergenic 30.0%
TTTGACATTTGAATGCAGAT+GGG - Chr2:75468010-75468029 MsG0280010823.01.T01:intron 30.0%
! AATAAAGTATGAAACGGGTT+TGG - Chr2:75465320-75465339 MsG0280010823.01.T01:intron 30.0%
! ATCCATTTTGTAGTTACTAG+CGG - Chr2:75465226-75465245 MsG0280010823.01.T01:CDS 30.0%
! GTAACAGAAAACCTTTTCTT+GGG + Chr2:75464295-75464314 None:intergenic 30.0%
! TATTTCTGATACTGAGTATC+AGG + Chr2:75464547-75464566 None:intergenic 30.0%
! TGCATTTTCTTTCTTTGCAT+AGG - Chr2:75466211-75466230 MsG0280010823.01.T01:intron 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + Chr2:75466770-75466789 None:intergenic 30.0%
! TTTCTTTTCCTGATCAAAAC+TGG - Chr2:75465620-75465639 MsG0280010823.01.T01:intron 30.0%
! TTTTCTCTCATTACTAGTAC+TGG + Chr2:75464406-75464425 None:intergenic 30.0%
! TTTTGACATTTGAATGCAGA+TGG - Chr2:75468009-75468028 MsG0280010823.01.T01:intron 30.0%
!! AATGAAAATGAAAAGTGCCA+TGG + Chr2:75467440-75467459 None:intergenic 30.0%
!! GATTTTCTAGCAAAGTATAG+GGG - Chr2:75464853-75464872 MsG0280010823.01.T01:intron 30.0%
!! GGATTTTCTAGCAAAGTATA+GGG - Chr2:75464852-75464871 MsG0280010823.01.T01:intron 30.0%
!! GTAGTTTACTGACTTTATGT+AGG + Chr2:75467343-75467362 None:intergenic 30.0%
!! TAAATATGCCAGTTTTGATC+AGG + Chr2:75465631-75465650 None:intergenic 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + Chr2:75466769-75466788 None:intergenic 30.0%
!! TGGATTTTCTAGCAAAGTAT+AGG - Chr2:75464851-75464870 MsG0280010823.01.T01:intron 30.0%
!!! ATGTATTGGTTTTCAACACA+TGG - Chr2:75467882-75467901 MsG0280010823.01.T01:intron 30.0%
!!! CATATTATTTTGGCACTCTT+TGG - Chr2:75469074-75469093 MsG0280010823.01.T01:five_prime_UTR 30.0%
AAGTTGGACTCAATAAAGAG+TGG - Chr2:75467839-75467858 MsG0280010823.01.T01:intron 35.0%
ACACGATTGATTGTGATTTG+TGG - Chr2:75467676-75467695 MsG0280010823.01.T01:intron 35.0%
ACTATCATTTACCATTGCCA+TGG - Chr2:75465409-75465428 MsG0280010823.01.T01:CDS 35.0%
AGAAAATGGGTCAGTTATTC+CGG + Chr2:75466734-75466753 None:intergenic 35.0%
AGAAGAACATTCCAAGTATC+AGG + Chr2:75468873-75468892 None:intergenic 35.0%
AGAGAAACACAACCATTCTT+TGG - Chr2:75468663-75468682 MsG0280010823.01.T01:intron 35.0%
AGCTATGATAGAAATGGAGA+AGG + Chr2:75464613-75464632 None:intergenic 35.0%
AGTCAACTAGGTCAGTAATA+TGG + Chr2:75466389-75466408 None:intergenic 35.0%
ATAACACTACTATACCCTTC+TGG + Chr2:75468813-75468832 None:intergenic 35.0%
ATACACTACATTGTTGACAC+TGG + Chr2:75467706-75467725 None:intergenic 35.0%
ATAGGTCAAGTAATATGGGA+CGG - Chr2:75466600-75466619 MsG0280010823.01.T01:intron 35.0%
ATTGTACTTTCCCTCTTCTT+TGG - Chr2:75465584-75465603 MsG0280010823.01.T01:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG - Chr2:75466916-75466935 MsG0280010823.01.T01:intron 35.0%
CAAATCACAATCAATCGTGT+TGG + Chr2:75467676-75467695 None:intergenic 35.0%
CAATTAGGTGAAAGACAGAA+AGG + Chr2:75465146-75465165 None:intergenic 35.0%
CAGATGGGATTATATTCAAG+AGG - Chr2:75468025-75468044 MsG0280010823.01.T01:intron 35.0%
CCAAAGTAGGTCAATTATAC+CGG - Chr2:75466915-75466934 MsG0280010823.01.T01:intron 35.0%
CCACATTGTGTGATAAAAGA+AGG - Chr2:75467385-75467404 MsG0280010823.01.T01:intron 35.0%
CTACAAAGGTTTGACAACTT+GGG - Chr2:75468088-75468107 MsG0280010823.01.T01:intron 35.0%
CTTGGTATAGAACAAGTGAA+AGG + Chr2:75464580-75464599 None:intergenic 35.0%
CTTTCACTTGTTCTATACCA+AGG - Chr2:75464578-75464597 MsG0280010823.01.T01:CDS 35.0%
CTTTCTGTCTTTCACCTAAT+TGG - Chr2:75465144-75465163 MsG0280010823.01.T01:intron 35.0%
CTTTGGTTGAAGAAGTGAAT+TGG - Chr2:75468905-75468924 MsG0280010823.01.T01:five_prime_UTR 35.0%
CTTTGTAGAACGCAATGAAA+CGG + Chr2:75468076-75468095 None:intergenic 35.0%
GAATAGAGCTTAATCGCTTA+AGG + Chr2:75466147-75466166 None:intergenic 35.0%
GCTTCTGTTAGATTTAGTGT+AGG - Chr2:75464630-75464649 MsG0280010823.01.T01:CDS 35.0%
GTCAACTAGGTCAGTAATAT+GGG + Chr2:75466388-75466407 None:intergenic 35.0%
GTCACATCTAGAAAATACAC+TGG + Chr2:75468759-75468778 None:intergenic 35.0%
GTGTGCGGAATAGAAATAAT+TGG + Chr2:75467776-75467795 None:intergenic 35.0%
TACATGCTAGTGAATTGAAC+TGG + Chr2:75464917-75464936 None:intergenic 35.0%
TCTACAAAGGTTTGACAACT+TGG - Chr2:75468087-75468106 MsG0280010823.01.T01:intron 35.0%
TCTCAAGTAGTGTAGTACTT+TGG - Chr2:75467511-75467530 MsG0280010823.01.T01:intron 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - Chr2:75466902-75466921 MsG0280010823.01.T01:intron 35.0%
TGAAAGCAGAGATCTGAATT+AGG + Chr2:75467312-75467331 None:intergenic 35.0%
TGAAGAAGTGAATTGGAAAG+TGG - Chr2:75468912-75468931 MsG0280010823.01.T01:five_prime_UTR 35.0%
TGTATAAATGAAGGGGAAAG+TGG + Chr2:75466872-75466891 None:intergenic 35.0%
! AACCCATTGTTTTCTACCAT+AGG - Chr2:75468965-75468984 MsG0280010823.01.T01:five_prime_UTR 35.0%
! CAAACCAAGGTCTTCTTTTT+AGG - Chr2:75468143-75468162 MsG0280010823.01.T01:intron 35.0%
! CAATAAAGAGTGGTAATGCA+TGG - Chr2:75467849-75467868 MsG0280010823.01.T01:intron 35.0%
! CCTTCTTTTATCACACAATG+TGG + Chr2:75467388-75467407 None:intergenic 35.0%
! CTCATTACTAGTACTGGAAA+CGG + Chr2:75464400-75464419 None:intergenic 35.0%
! GAGAAACACGTGTTTTCTTT+CGG + Chr2:75465831-75465850 None:intergenic 35.0%
! GGTAACAGAAAACCTTTTCT+TGG + Chr2:75464296-75464315 None:intergenic 35.0%
! GTGAATGTTTTGTACTATGG+TGG + Chr2:75468468-75468487 None:intergenic 35.0%
!! ACACATAGATTTTGGCATAC+TGG + Chr2:75468402-75468421 None:intergenic 35.0%
!! AGGGAAAGGTATTGACAATT+TGG + Chr2:75466267-75466286 None:intergenic 35.0%
!! TAGAAAACAATGGGTTTTCC+TGG + Chr2:75468961-75468980 None:intergenic 35.0%
!!! GAGAAGGAATACCTTGTTTT+TGG + Chr2:75464957-75464976 None:intergenic 35.0%
AAACTCGCTGGAAGATGTAA+TGG - Chr2:75464423-75464442 MsG0280010823.01.T01:CDS 40.0%
ACAAAACATGGGTTCACACA+AGG + Chr2:75465189-75465208 None:intergenic 40.0%
ACAACTTACTCGTAATGCAC+AGG + Chr2:75468176-75468195 None:intergenic 40.0%
ACGTGCAAAGAAGAAAAGGT+TGG + Chr2:75466665-75466684 None:intergenic 40.0%
ACTAGGTCAGTAATATGGGA+CGG + Chr2:75466384-75466403 None:intergenic 40.0%
ACTTGCACAAAGTATGTGTG+AGG - Chr2:75468338-75468357 MsG0280010823.01.T01:five_prime_UTR 40.0%
AGAAAAGATGCACATCCAGA+AGG - Chr2:75468795-75468814 MsG0280010823.01.T01:five_prime_UTR 40.0%
AGTAATGAGAGAAAACTCGC+TGG - Chr2:75464411-75464430 MsG0280010823.01.T01:exon 40.0%
ATAAACGTGACGAGTCAACT+AGG + Chr2:75466401-75466420 None:intergenic 40.0%
ATCCTCTCTGTTGAAGGAAA+AGG + Chr2:75464267-75464286 None:intergenic 40.0%
ATCTATGAGGGACAAGAAGA+AGG + Chr2:75464494-75464513 None:intergenic 40.0%
ATGGAGAGGAATGGATGTAT+TGG - Chr2:75467868-75467887 MsG0280010823.01.T01:intron 40.0%
ATGTCTACGTTCCAAAGAAG+AGG + Chr2:75465598-75465617 None:intergenic 40.0%
ATTCTTGGGTGCCAAAAACA+AGG - Chr2:75464943-75464962 MsG0280010823.01.T01:intron 40.0%
CAAAGAACACATCACTTGCA+TGG + Chr2:75465123-75465142 None:intergenic 40.0%
CAAGAAGAAGGATCATAGAG+AGG + Chr2:75464482-75464501 None:intergenic 40.0%
CACCAATGACTACAATCTGT+TGG + Chr2:75468837-75468856 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG + Chr2:75466918-75466937 None:intergenic 40.0%
CGTTTCATTGCGTTCTACAA+AGG - Chr2:75468074-75468093 MsG0280010823.01.T01:intron 40.0%
GAAAAGATGCACATCCAGAA+GGG - Chr2:75468796-75468815 MsG0280010823.01.T01:five_prime_UTR 40.0%
GAAAATGGGTCAGTTATTCC+GGG + Chr2:75466733-75466752 None:intergenic 40.0%
GAACACCAAATATAAGACGG+AGG + Chr2:75465878-75465897 None:intergenic 40.0%
GATCATAGAGAGGATACGAA+GGG + Chr2:75464472-75464491 None:intergenic 40.0%
GGAGAAGGAGATATATACCT+TGG + Chr2:75464598-75464617 None:intergenic 40.0%
GGGTACTTCAAACCAAAGAA+TGG + Chr2:75468678-75468697 None:intergenic 40.0%
GTAATGGTTTCGTGGCAAAT+GGG - Chr2:75464439-75464458 MsG0280010823.01.T01:CDS 40.0%
TCCATGTTGGTGTGAAACAA+TGG - Chr2:75465288-75465307 MsG0280010823.01.T01:intron 40.0%
TCCATTGTTTCACACCAACA+TGG + Chr2:75465292-75465311 None:intergenic 40.0%
TCTATTCCGCACACCATATT+TGG - Chr2:75467782-75467801 MsG0280010823.01.T01:intron 40.0%
TGCCAACAGATTGTAGTCAT+TGG - Chr2:75468832-75468851 MsG0280010823.01.T01:five_prime_UTR 40.0%
TGGAAGATGTAATGGTTTCG+TGG - Chr2:75464431-75464450 MsG0280010823.01.T01:CDS 40.0%
TGGGATTATATTCAAGAGGG+TGG - Chr2:75468029-75468048 MsG0280010823.01.T01:intron 40.0%
TGTAAATCCAGCTCAAACCA+AGG - Chr2:75468130-75468149 MsG0280010823.01.T01:intron 40.0%
TGTAATGGTTTCGTGGCAAA+TGG - Chr2:75464438-75464457 MsG0280010823.01.T01:CDS 40.0%
TGTCTACGTTCCAAAGAAGA+GGG + Chr2:75465597-75465616 None:intergenic 40.0%
TTAAAAATGTCCCCGGCAAA+AGG + Chr2:75465357-75465376 None:intergenic 40.0%
TTATATTCAAGAGGGTGGCA+AGG - Chr2:75468034-75468053 MsG0280010823.01.T01:intron 40.0%
TTCACTATTACCCAAGCCAT+TGG + Chr2:75468711-75468730 None:intergenic 40.0%
! AAAGTATGAAACGGGTTTGG+TGG - Chr2:75465323-75465342 MsG0280010823.01.T01:intron 40.0%
! GTCATGTGGTCCATTTTGAA+GGG + Chr2:75467281-75467300 None:intergenic 40.0%
! TCTCTCATGCATGATTTTGC+TGG + Chr2:75468648-75468667 None:intergenic 40.0%
! TGGTTTTCAACACATGGCAT+TGG - Chr2:75467888-75467907 MsG0280010823.01.T01:intron 40.0%
! TGTCATGTGGTCCATTTTGA+AGG + Chr2:75467282-75467301 None:intergenic 40.0%
! TTTGACAACTTGGGCTAGAT+GGG - Chr2:75468097-75468116 MsG0280010823.01.T01:intron 40.0%
!! ACATTGGCGTGTTCTAAAGT+TGG - Chr2:75467823-75467842 MsG0280010823.01.T01:intron 40.0%
!! GACAACTTTTTCTGCACTCT+TGG - Chr2:75464240-75464259 MsG0280010823.01.T01:three_prime_UTR 40.0%
!! GATAGCACTTTGCTTTGAGA+AGG + Chr2:75464973-75464992 None:intergenic 40.0%
!! GGGAGTACTAATGATGATTG+TGG + Chr2:75466360-75466379 None:intergenic 40.0%
!! TTTTCAACACATGGCATTGG+TGG - Chr2:75467891-75467910 MsG0280010823.01.T01:intron 40.0%
ACGCTCCTCCGTCTTATATT+TGG - Chr2:75465870-75465889 MsG0280010823.01.T01:intron 45.0%
AGAACACGCCAATGTTCTCA+CGG + Chr2:75467818-75467837 None:intergenic 45.0%
CAAAATGGACCACATGACAC+TGG - Chr2:75467283-75467302 MsG0280010823.01.T01:intron 45.0%
CGCCGCTAGTAACTACAAAA+TGG + Chr2:75465231-75465250 None:intergenic 45.0%
CGGTCAAGGTCTACCAAATA+TGG + Chr2:75467798-75467817 None:intergenic 45.0%
CTTCTTCATGCAGCTCTCTT+TGG - Chr2:75468888-75468907 MsG0280010823.01.T01:five_prime_UTR 45.0%
GAGGATCGAAACCCAAGAAA+AGG - Chr2:75464281-75464300 MsG0280010823.01.T01:three_prime_UTR 45.0%
GGATCATAGAGAGGATACGA+AGG + Chr2:75464473-75464492 None:intergenic 45.0%
GGTAAATTAGGGGGAGAGAT+TGG - Chr2:75468616-75468635 MsG0280010823.01.T01:intron 45.0%
GGTCTACCAAATATGGTGTG+CGG + Chr2:75467791-75467810 None:intergenic 45.0%
GTAGGTCAATTATACCGGGA+CGG - Chr2:75466920-75466939 MsG0280010823.01.T01:intron 45.0%
GTCAAGTAATATGGGACGGA+GGG - Chr2:75466604-75466623 MsG0280010823.01.T01:intron 45.0%
GTTTCGATCCTCTCTGTTGA+AGG + Chr2:75464273-75464292 None:intergenic 45.0%
TCACTGAAAGGAGTTGAGTG+AGG - Chr2:75467484-75467503 MsG0280010823.01.T01:intron 45.0%
TTCCAAGTATCAGGAAGTCC+TGG + Chr2:75468864-75468883 None:intergenic 45.0%
TTCCAGGACTTCCTGATACT+TGG - Chr2:75468859-75468878 MsG0280010823.01.T01:five_prime_UTR 45.0%
! AAGAAGACCTTGGTTTGAGC+TGG + Chr2:75468140-75468159 None:intergenic 45.0%
! AAGAGTGGTAATGCATGGAG+AGG - Chr2:75467854-75467873 MsG0280010823.01.T01:intron 45.0%
! GGTAGTTGTTGCTGTTGTGT+TGG + Chr2:75464379-75464398 None:intergenic 45.0%
! GTCCTTTTCCTTCAACAGAG+AGG - Chr2:75464262-75464281 MsG0280010823.01.T01:three_prime_UTR 45.0%
! GTGGTGGCACACATAGATTT+TGG + Chr2:75468410-75468429 None:intergenic 45.0%
! GTTACTAGCGGCGAATTTTG+TGG - Chr2:75465238-75465257 MsG0280010823.01.T01:CDS 45.0%
! GTTTGACAACTTGGGCTAGA+TGG - Chr2:75468096-75468115 MsG0280010823.01.T01:intron 45.0%
! TGGTAATGCATGGAGAGGAA+TGG - Chr2:75467859-75467878 MsG0280010823.01.T01:intron 45.0%
! TGTAGTCATTGGTGTCTTCC+AGG - Chr2:75468843-75468862 MsG0280010823.01.T01:five_prime_UTR 45.0%
!! TTTGGTTTGAAGTACCCAGC+AGG - Chr2:75468681-75468700 MsG0280010823.01.T01:intron 45.0%
!! ATATTTAAAAATACATTTAT+TGG - Chr2:75465528-75465547 MsG0280010823.01.T01:five_prime_UTR 5.0%
!! TATTTAAAAATACATTTATT+GGG - Chr2:75465529-75465548 MsG0280010823.01.T01:five_prime_UTR 5.0%
!!! TATTAATATTATTTTCAAAA+AGG + Chr2:75467183-75467202 None:intergenic 5.0%
AATGGACCACATGACACTGG+TGG - Chr2:75467286-75467305 MsG0280010823.01.T01:intron 50.0%
ACGGTTGTGCATTTCCAGTG+TGG + Chr2:75467919-75467938 None:intergenic 50.0%
AGCAGGAACACCAATGGCTT+GGG - Chr2:75468698-75468717 MsG0280010823.01.T01:intron 50.0%
AGGTCAGTAATATGGGACGG+AGG + Chr2:75466381-75466400 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + Chr2:75466729-75466748 None:intergenic 50.0%
ATTAGGCCACCAGTGTCATG+TGG + Chr2:75467295-75467314 None:intergenic 50.0%
ATTTGATACTCCCTCCGTCC+CGG - Chr2:75466712-75466731 MsG0280010823.01.T01:intron 50.0%
CACTGGAAATGCACAACCGT+AGG - Chr2:75467919-75467938 MsG0280010823.01.T01:intron 50.0%
CGGTTGTGCATTTCCAGTGT+GGG + Chr2:75467918-75467937 None:intergenic 50.0%
GACCTTGACCGTGAGAACAT+TGG - Chr2:75467807-75467826 MsG0280010823.01.T01:intron 50.0%
GGGGACGTGCAAAGAAGAAA+AGG + Chr2:75466669-75466688 None:intergenic 50.0%
GGTCAAGTAATATGGGACGG+AGG - Chr2:75466603-75466622 MsG0280010823.01.T01:intron 50.0%
GGTCAGTAATATGGGACGGA+GGG + Chr2:75466380-75466399 None:intergenic 50.0%
GTCAATTATACCGGGACGGA+GGG - Chr2:75466924-75466943 MsG0280010823.01.T01:intron 50.0%
! AAGCCATTGGTGTTCCTGCT+GGG + Chr2:75468698-75468717 None:intergenic 50.0%
! GTGGAGGCTTTTCCTTTTGC+CGG - Chr2:75465342-75465361 MsG0280010823.01.T01:intron 50.0%
! TGGAGGCTTTTCCTTTTGCC+GGG - Chr2:75465343-75465362 MsG0280010823.01.T01:intron 50.0%
!! GTATGAAACGGGTTTGGTGG+AGG - Chr2:75465326-75465345 MsG0280010823.01.T01:intron 50.0%
ACTAGATACTCCCTCCGTCC+CGG + Chr2:75466937-75466956 None:intergenic 55.0%
CAGCAGGAACACCAATGGCT+TGG - Chr2:75468697-75468716 MsG0280010823.01.T01:intron 55.0%
CGCCAATGTTCTCACGGTCA+AGG + Chr2:75467812-75467831 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG - Chr2:75466923-75466942 MsG0280010823.01.T01:intron 55.0%
GTACCCAGCAGGAACACCAA+TGG - Chr2:75468692-75468711 MsG0280010823.01.T01:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG + Chr2:75466725-75466744 None:intergenic 55.0%
! CAAGCCATTGGTGTTCCTGC+TGG + Chr2:75468699-75468718 None:intergenic 55.0%
! GGAGGCTTTTCCTTTTGCCG+GGG - Chr2:75465344-75465363 MsG0280010823.01.T01:intron 55.0%
GGTCAGTTATTCCGGGACGG+AGG + Chr2:75466726-75466745 None:intergenic 60.0%
!! TGGCATTGGTGGACCCACAC+TGG - Chr2:75467902-75467921 MsG0280010823.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 75464196 75469135 75464196 ID=MsG0280010823.01;Name=MsG0280010823.01
Chr2 mRNA 75464196 75469135 75464196 ID=MsG0280010823.01.T01;Parent=MsG0280010823.01;Name=MsG0280010823.01.T01;_AED=0.41;_eAED=0.41;_QI=691|1|1|1|0.5|0.4|5|221|168
Chr2 exon 75464196 75464705 75464196 ID=MsG0280010823.01.T01:exon:11149;Parent=MsG0280010823.01.T01
Chr2 exon 75465145 75465303 75465145 ID=MsG0280010823.01.T01:exon:11148;Parent=MsG0280010823.01.T01
Chr2 exon 75465395 75465569 75465395 ID=MsG0280010823.01.T01:exon:11147;Parent=MsG0280010823.01.T01
Chr2 exon 75468321 75468491 75468321 ID=MsG0280010823.01.T01:exon:11146;Parent=MsG0280010823.01.T01
Chr2 exon 75468732 75469135 75468732 ID=MsG0280010823.01.T01:exon:11145;Parent=MsG0280010823.01.T01
Chr2 five_prime_UTR 75468732 75469135 75468732 ID=MsG0280010823.01.T01:five_prime_utr;Parent=MsG0280010823.01.T01
Chr2 five_prime_UTR 75468321 75468491 75468321 ID=MsG0280010823.01.T01:five_prime_utr;Parent=MsG0280010823.01.T01
Chr2 five_prime_UTR 75465454 75465569 75465454 ID=MsG0280010823.01.T01:five_prime_utr;Parent=MsG0280010823.01.T01
Chr2 CDS 75465395 75465453 75465395 ID=MsG0280010823.01.T01:cds;Parent=MsG0280010823.01.T01
Chr2 CDS 75465145 75465303 75465145 ID=MsG0280010823.01.T01:cds;Parent=MsG0280010823.01.T01
Chr2 CDS 75464417 75464705 75464417 ID=MsG0280010823.01.T01:cds;Parent=MsG0280010823.01.T01
Chr2 three_prime_UTR 75464196 75464416 75464196 ID=MsG0280010823.01.T01:three_prime_utr;Parent=MsG0280010823.01.T01
Gene Sequence

>MsG0280010823.01.T01

ATGGATGTATTGGTTTTCAACACATGGCATTGGTGGACCCACACTGGAAATGCACAACCATGGGATTATATTCAAGAGGGTGGCAAGGTGTACAAAGACATGAACCGTTTCATTGCGTTCTACAAAGGTTTGACAACTTGGGCTAGATGGGTTAACATCAATGTAAATCCAGCTCAAACCAAGGTCTTCTTTTTAGGAATTTCTCCTGTGCATTACGAGGGGAGAGATTGGAATCAACCAGCAAAATCATGCATGAGAGAAACACAACCATTCTTTGGTTTGAAGTACCCAGCAGGAACACCAATGGCTTGGGTAATAGTGAATAAAGTATTGAGCAGATTAAAGAAGCCAGTGTATTTTCTAGATGTGACAACATTGTCACAGTACAGAAAAGATGCACATCCAGAAGGGTATAGTAGTGTTATGCCAACAGATTGTAGTCATTGGTGTCTTCCAGGACTTCCTGATACTTGGAATGTTCTTCTTCATGCAGCTCTCTTTGGTTGA
Protein sequence

>MsG0280010823.01.T01

MDVLVFNTWHWWTHTGNAQPWDYIQEGGKVYKDMNRFIAFYKGLTTWARWVNINVNPAQTKVFFLGISPVHYEGRDWNQPAKSCMRETQPFFGLKYPAGTPMAWVIVNKVLSRLKKPVYFLDVTTLSQYRKDAHPEGYSSVMPTDCSHWCLPGLPDTWNVLLHAALFG*