AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014612.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014612.01.T01 MTR_3g061370 67.829 258 77 3 97 350 25 280 3.08e-120 348
MsG0380014612.01.T01 MTR_3g061350 68.217 258 76 3 97 350 28 283 8.74e-120 347
MsG0380014612.01.T01 MTR_3g061340 69.380 258 63 5 97 350 28 273 2.20e-119 346
MsG0380014612.01.T01 MTR_3g061310 67.568 259 77 3 97 350 28 284 6.60e-119 345
MsG0380014612.01.T01 MTR_3g061320 68.235 255 76 2 97 350 28 278 3.32e-118 343
MsG0380014612.01.T01 MTR_3g061330 69.406 219 62 4 97 313 28 243 4.05e-102 301
MsG0380014612.01.T01 MTR_3g061290 80.420 143 28 0 89 231 20 162 1.09e-79 242
MsG0380014612.01.T01 MTR_3g061300 79.688 128 21 2 230 354 1 126 5.15e-65 202
MsG0380014612.01.T01 MTR_1g035460 33.333 288 148 10 99 350 6 285 2.74e-42 152
MsG0380014612.01.T01 MTR_3g061220 65.179 112 25 2 89 200 20 117 1.23e-41 142
MsG0380014612.01.T01 MTR_1g108780 30.241 291 157 7 97 354 15 292 1.38e-35 135
MsG0380014612.01.T01 MTR_8g103940 29.758 289 160 5 93 350 53 329 1.91e-34 132
MsG0380014612.01.T01 MTR_5g044670 26.978 278 173 7 99 354 36 305 2.20e-32 124
MsG0380014612.01.T01 MTR_7g050710 28.470 281 176 6 93 350 27 305 1.60e-29 116
MsG0380014612.01.T01 MTR_7g050560 31.365 271 154 10 98 350 32 288 3.82e-29 114
MsG0380014612.01.T01 MTR_7g050580 29.412 272 158 8 98 350 32 288 1.98e-27 110
MsG0380014612.01.T01 MTR_7g050590 28.986 276 171 9 98 350 5 278 3.52e-27 109
MsG0380014612.01.T01 MTR_3g098790 26.715 277 168 6 98 350 32 297 1.19e-26 108
MsG0380014612.01.T01 MTR_7g050720 28.205 312 175 10 79 350 11 313 1.88e-25 105
MsG0380014612.01.T01 MTR_1g035640 28.470 281 175 7 87 353 13 281 9.17e-25 105
MsG0380014612.01.T01 MTR_1g035570 26.165 279 171 7 99 355 25 290 5.24e-22 96.7
MsG0380014612.01.T01 MTR_5g070440 25.503 298 181 6 63 353 6 269 1.36e-21 93.2
MsG0380014612.01.T01 MTR_4g119990 27.645 293 174 11 89 350 25 310 3.14e-21 94.0
MsG0380014612.01.T01 MTR_6g043890 27.519 258 168 8 99 338 35 291 2.83e-20 90.9
MsG0380014612.01.T01 MTR_3g005480 28.723 282 142 9 79 348 22 256 3.17e-20 89.4
MsG0380014612.01.T01 MTR_6g061070 27.667 300 152 11 99 350 38 320 5.91e-20 91.3
MsG0380014612.01.T01 MTR_3g005490 29.008 262 137 8 99 353 41 260 1.09e-19 87.8
MsG0380014612.01.T01 MTR_1g035620 24.535 269 174 6 98 353 28 280 5.08e-18 85.1
MsG0380014612.01.T01 MTR_3g005460 26.136 264 153 6 99 350 282 515 3.47e-17 83.2
MsG0380014612.01.T01 MTR_3g005460 40.000 90 54 0 88 177 34 123 1.07e-14 75.5
MsG0380014612.01.T01 MTR_4g068320 35.833 120 69 1 91 202 18 137 8.60e-17 81.6
MsG0380014612.01.T01 MTR_3g005420 23.746 299 186 6 63 353 273 537 4.26e-16 79.7
MsG0380014612.01.T01 MTR_3g005420 23.596 267 139 6 88 345 49 259 2.69e-13 71.2
MsG0380014612.01.T01 MTR_3g005495 28.571 252 128 8 99 345 263 467 9.34e-15 75.5
MsG0380014612.01.T01 MTR_3g005495 35.644 101 65 0 97 197 31 131 1.80e-14 74.7
MsG0380014612.01.T01 MTR_1g035510 36.207 116 67 3 99 210 6 118 1.13e-14 72.8
MsG0380014612.01.T01 MTR_1g050845 24.028 283 156 8 93 353 23 268 2.14e-14 75.1
MsG0380014612.01.T01 MTR_3g005440 33.663 101 67 0 97 197 38 138 2.35e-14 74.3
MsG0380014612.01.T01 MTR_3g005440 34.314 102 67 0 89 190 252 353 9.15e-13 69.3
MsG0380014612.01.T01 MTR_1g034240 33.333 111 72 1 97 205 25 135 3.45e-14 73.6
MsG0380014612.01.T01 MTR_7g050640 38.667 75 46 0 98 172 32 106 4.44e-14 68.6
MsG0380014612.01.T01 MTR_1g035650 32.090 134 79 3 99 227 29 155 5.56e-14 70.5
MsG0380014612.01.T01 MTR_3g005420 23.596 267 139 6 88 345 30 240 2.10e-13 71.6
MsG0380014612.01.T01 MTR_1g035470 34.091 132 77 4 99 224 6 133 7.43e-13 65.9
MsG0380014612.01.T01 MTR_1g034210 37.500 96 58 1 91 186 19 112 1.82e-12 67.8
MsG0380014612.01.T01 MTR_1g034210 37.500 96 58 1 91 186 19 112 2.31e-12 67.8
MsG0380014612.01.T01 MTR_1g035440 39.024 82 49 1 99 179 35 116 7.86e-12 65.1
MsG0380014612.01.T01 MTR_1g035520 27.124 306 154 12 99 350 92 382 2.17e-11 65.1
MsG0380014612.01.T01 MTR_1g035480 33.333 111 65 4 99 203 37 144 2.70e-11 62.4
MsG0380014612.01.T01 MTR_1g021360 23.611 288 187 8 85 348 188 466 3.62e-11 64.7
MsG0380014612.01.T01 MTR_1g033740 33.645 107 63 4 99 200 42 145 9.75e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014612.01.T01 AT3G18990 25.234 321 175 8 89 348 16 332 7.34e-21 92.8
MsG0380014612.01.T01 AT1G49475 34.815 135 83 3 62 196 20 149 1.80e-15 74.3
MsG0380014612.01.T01 AT4G01580 30.709 127 81 2 89 214 40 160 6.52e-15 72.8
MsG0380014612.01.T01 AT3G18990 31.933 119 75 1 89 201 16 134 2.19e-14 73.9
MsG0380014612.01.T01 AT3G18960 33.696 92 61 0 90 181 41 132 1.80e-12 65.9
MsG0380014612.01.T01 AT3G18960 33.696 92 61 0 90 181 41 132 1.82e-12 66.2
MsG0380014612.01.T01 AT3G18960 36.145 83 53 0 99 181 13 95 2.17e-12 65.1

Find 69 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTGTGTACCAACTTTAAA+TGG 0.174261 3:+57195179 MsG0380014612.01.T01:intron
GTACTAAATGGAAAGTTTAT+TGG 0.221899 3:+57192767 MsG0380014612.01.T01:CDS
CTCTCTTGGACATGGCTGTT+TGG 0.307883 3:+57192849 MsG0380014612.01.T01:CDS
AGTCTATTTCTACTGCATTC+TGG 0.324981 3:-57192921 None:intergenic
CTTTGCCAACATTTCGCTAA+TGG 0.327221 3:+57190872 MsG0380014612.01.T01:CDS
AGAGTCCTGATGGTACTAAA+TGG 0.342374 3:+57192755 MsG0380014612.01.T01:CDS
ACTGATAAACAAGAATGATT+TGG 0.354823 3:+57195367 MsG0380014612.01.T01:CDS
AATGGCGAAAATCTCGTTAA+TGG 0.355490 3:+57190890 MsG0380014612.01.T01:CDS
GATACATTAACGGTCACTTT+TGG 0.356442 3:-57195408 None:intergenic
GACCACTTTCTCTTGCAAAC+AGG 0.362637 3:-57195316 None:intergenic
TTTACTGAAAATTACTCTCT+TGG 0.363298 3:+57192835 MsG0380014612.01.T01:CDS
TGGTGAGATTTGGTTTGAAA+AGG 0.373936 3:+57192801 MsG0380014612.01.T01:CDS
CGCTAATGGCGAAACCTCTC+TGG 0.374700 3:+57190847 MsG0380014612.01.T01:CDS
CTACTCATCTAGCAGAAAAT+CGG 0.375195 3:+57195053 MsG0380014612.01.T01:CDS
ATCGATAATGAGAAATTCTT+AGG 0.391165 3:+57191487 MsG0380014612.01.T01:CDS
AAAGAACTACATCATGGAAT+TGG 0.395138 3:+57194954 MsG0380014612.01.T01:CDS
TTGGGAAAAGATCAGGAATC+TGG 0.398339 3:+57195240 MsG0380014612.01.T01:CDS
ACATTTCTAGCCTCACAATA+AGG 0.400255 3:-57195271 None:intergenic
TTCGCTGATGACTTCGCTAA+TGG 0.401293 3:+57190833 MsG0380014612.01.T01:CDS
TCCTGAGCTCTAGCTCCCTT+TGG 0.408256 3:-57194977 None:intergenic
TGGCGAAAATCTTGTGAACT+TGG 0.433202 3:+57190910 MsG0380014612.01.T01:CDS
TTCAAGAAGACAAATGGATA+AGG 0.435653 3:-57190809 None:intergenic
AAGTTTGATGTATTAATACT+TGG 0.443758 3:+57192898 MsG0380014612.01.T01:CDS
TCAATAACCCCATTTAAAGT+TGG 0.446011 3:-57195188 None:intergenic
CGACCACATAAGAAAGTAAG+AGG 0.449011 3:+57193072 MsG0380014612.01.T01:CDS
AGTGTGTACCAACTTTAAAT+GGG 0.455268 3:+57195180 MsG0380014612.01.T01:intron
TGTGGTCGAGGAGAAAATAA+TGG 0.464278 3:-57193057 None:intergenic
GCGAACTTCAAGAAGACAAA+TGG 0.467469 3:-57190815 None:intergenic
AGATTTGGTTTGAAAAGGGT+TGG 0.470784 3:+57192806 MsG0380014612.01.T01:CDS
CTGCAGATTGGGAAAAGATC+AGG 0.479938 3:+57195233 MsG0380014612.01.T01:CDS
ACTTTCCATTTAGTACCATC+AGG 0.482876 3:-57192760 None:intergenic
ATGAAGAAGATTTGTGAACT+TGG 0.483134 3:+57191463 MsG0380014612.01.T01:CDS
GCGACGTGGAGCCACCTCAT+TGG 0.486804 3:-57190786 None:intergenic
TGTTCGCCGCTCTCGGCGGT+TGG 0.487544 3:+57195291 MsG0380014612.01.T01:CDS
ATACCTCTTACTTTCTTATG+TGG 0.489376 3:-57193075 None:intergenic
TTGGTGGTGTTTGAATATAA+AGG 0.491592 3:+57192868 MsG0380014612.01.T01:CDS
AGTATGTGATGCTGCAGATT+GGG 0.492313 3:+57195222 MsG0380014612.01.T01:CDS
GGTGAGATTTGGTTTGAAAA+GGG 0.495938 3:+57192802 MsG0380014612.01.T01:CDS
CTTACTTTCTTATGTGGTCG+AGG 0.501623 3:-57193069 None:intergenic
ACCACTTTCTCTTGCAAACA+GGG 0.504654 3:-57195315 None:intergenic
TCTTGGACATGGCTGTTTGG+TGG 0.505898 3:+57192852 MsG0380014612.01.T01:CDS
CTAGAAATGTTCGCCGCTCT+CGG 0.506069 3:+57195284 MsG0380014612.01.T01:CDS
ATGTCTCCTTGTAAACTCAT+TGG 0.510224 3:-57192701 None:intergenic
TTTCGCCATTAGCGAAATGT+TGG 0.510383 3:-57190877 None:intergenic
TACTCATCTAGCAGAAAATC+GGG 0.527511 3:+57195054 MsG0380014612.01.T01:CDS
TCAAGAAGACAAATGGATAA+GGG 0.527967 3:-57190808 None:intergenic
ACATCATGGAATTGGCCAAA+GGG 0.541191 3:+57194962 MsG0380014612.01.T01:CDS
AGAGAAAGTGGTCTGCAAGT+AGG 0.546476 3:+57195326 MsG0380014612.01.T01:CDS
TCCCTGTTTGCAAGAGAAAG+TGG 0.549015 3:+57195314 MsG0380014612.01.T01:CDS
GCCAAAGGGAGCTAGAGCTC+AGG 0.549833 3:+57194976 MsG0380014612.01.T01:CDS
CAGGGACCAACCGCCGAGAG+CGG 0.550924 3:-57195297 None:intergenic
TCAGGACTCTTGATCAACAC+TGG 0.571999 3:-57192742 None:intergenic
CTAATCAAAGAACTACATCA+TGG 0.573456 3:+57194948 MsG0380014612.01.T01:CDS
AAGTATGTGATGCTGCAGAT+TGG 0.577298 3:+57195221 MsG0380014612.01.T01:CDS
AAAATACCAATGAGTTTACA+AGG 0.579007 3:+57192695 MsG0380014612.01.T01:CDS
GTGTTGATCAAGAGTCCTGA+TGG 0.607925 3:+57192745 MsG0380014612.01.T01:CDS
TACATCATGGAATTGGCCAA+AGG 0.610272 3:+57194961 MsG0380014612.01.T01:CDS
GATGATGAAAATGACAATGT+TGG 0.615278 3:+57192964 MsG0380014612.01.T01:CDS
GAAATGTTCGCCGCTCTCGG+CGG 0.617522 3:+57195287 MsG0380014612.01.T01:CDS
CTGCTTATGCACCAATGAGG+TGG 0.622917 3:+57190775 MsG0380014612.01.T01:CDS
GAAAATTACTCTCTTGGACA+TGG 0.632483 3:+57192841 MsG0380014612.01.T01:CDS
GGAAATGCTTCCTTATTGTG+AGG 0.632818 3:+57195261 MsG0380014612.01.T01:CDS
AATGAGTTTACAAGGAGACA+TGG 0.642216 3:+57192703 MsG0380014612.01.T01:CDS
GTGTGTACCAACTTTAAATG+GGG 0.652978 3:+57195181 MsG0380014612.01.T01:intron
ACAAATGGATAAGGGCGACG+TGG 0.661171 3:-57190800 None:intergenic
TCATCTAGCAGAAAATCGGG+TGG 0.692960 3:+57195057 MsG0380014612.01.T01:CDS
ATGTTGGCAAAGTTCCAGAG+AGG 0.696026 3:-57190861 None:intergenic
TATCTGCTTATGCACCAATG+AGG 0.730193 3:+57190772 MsG0380014612.01.T01:CDS
GGTCGAGGAGAAAATAATGG+CGG 0.736189 3:-57193054 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATCAAATGTATATTTA+GGG + Chr3:57194716-57194735 MsG0380014612.01.T01:intron 10.0%
!! TAAATAAAGATATTCTTTAT+CGG - Chr3:57191342-57191361 None:intergenic 10.0%
!! AAAATCAAATGTATATTTAG+GGG + Chr3:57194717-57194736 MsG0380014612.01.T01:intron 15.0%
!! AATCAAATTGTTGATATTTA+AGG - Chr3:57194041-57194060 None:intergenic 15.0%
!! ATACACTCATTAATAAAAAA+TGG + Chr3:57193147-57193166 MsG0380014612.01.T01:intron 15.0%
!! ATCAAATTGTTGATATTTAA+GGG - Chr3:57194040-57194059 None:intergenic 15.0%
!! CATAAATGAAAAAATTTAGA+AGG - Chr3:57194098-57194117 None:intergenic 15.0%
!! CTAAAATCAAATGTATATTT+AGG + Chr3:57194715-57194734 MsG0380014612.01.T01:intron 15.0%
!! TAAAATAATAAAATGCAAGA+GGG - Chr3:57193808-57193827 None:intergenic 15.0%
!! TATAATTCTTGTGTTAATTT+AGG - Chr3:57191065-57191084 None:intergenic 15.0%
!!! AAGAAAACAAATTTTATGAA+AGG + Chr3:57191437-57191456 MsG0380014612.01.T01:CDS 15.0%
!!! AAGAGAGTAATTATATTTTA+GGG + Chr3:57191867-57191886 MsG0380014612.01.T01:intron 15.0%
!!! AGAAACAAATTTTTATTGAA+AGG + Chr3:57191395-57191414 MsG0380014612.01.T01:intron 15.0%
!!! GCATTTTATTATTTTACTTT+GGG + Chr3:57193812-57193831 MsG0380014612.01.T01:intron 15.0%
!!! TAAGAGAGTAATTATATTTT+AGG + Chr3:57191866-57191885 MsG0380014612.01.T01:intron 15.0%
!!! TATTGTATTATATTTTGATG+AGG + Chr3:57191689-57191708 MsG0380014612.01.T01:intron 15.0%
!!! TGCATTTTATTATTTTACTT+TGG + Chr3:57193811-57193830 MsG0380014612.01.T01:intron 15.0%
!! AAAAAAATGGGAAAAAAAGT+TGG - Chr3:57191953-57191972 None:intergenic 20.0%
!! AAATCAAATGTATATTTAGG+GGG + Chr3:57194718-57194737 MsG0380014612.01.T01:intron 20.0%
!! AACCACTTACAATAAAAATA+CGG + Chr3:57194807-57194826 MsG0380014612.01.T01:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - Chr3:57194621-57194640 None:intergenic 20.0%
!! AAGTTTGATGTATTAATACT+TGG + Chr3:57192898-57192917 MsG0380014612.01.T01:CDS 20.0%
!! ACTAAAATATGATTACTTTG+AGG + Chr3:57191901-57191920 MsG0380014612.01.T01:intron 20.0%
!! AGAAGAAGAAGAAAAAAAAT+GGG - Chr3:57191965-57191984 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + Chr3:57194622-57194641 MsG0380014612.01.T01:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + Chr3:57194563-57194582 MsG0380014612.01.T01:intron 20.0%
!! GTAAAAATAAGGATATGTTA+TGG - Chr3:57193520-57193539 None:intergenic 20.0%
!! GTAAAATAATAAAATGCAAG+AGG - Chr3:57193809-57193828 None:intergenic 20.0%
!! TCAAATTGTTGATATTTAAG+GGG - Chr3:57194039-57194058 None:intergenic 20.0%
!! TCTTTCAATATCATTATTGA+AGG + Chr3:57193946-57193965 MsG0380014612.01.T01:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + Chr3:57194623-57194642 MsG0380014612.01.T01:intron 20.0%
!! TTTAGGCTTAATTAATGATT+TGG - Chr3:57194681-57194700 None:intergenic 20.0%
!! TTTATGAGAATTGTGAAAAA+AGG - Chr3:57195031-57195050 None:intergenic 20.0%
!!! AATGCTTGTTTTACTTTTTT+AGG - Chr3:57193748-57193767 None:intergenic 20.0%
!!! AATTTTGGCTTAATAATGAT+TGG + Chr3:57194333-57194352 MsG0380014612.01.T01:intron 20.0%
!!! ATAAGTCTTTTATTTCTAGA+AGG + Chr3:57192617-57192636 MsG0380014612.01.T01:intron 20.0%
!!! ATGTTATGGCATTTAATTTT+TGG - Chr3:57193506-57193525 None:intergenic 20.0%
!!! TAAGCCTAAATTTTTTTAGA+GGG + Chr3:57194691-57194710 MsG0380014612.01.T01:intron 20.0%
!!! TATTATCCCTTTAATTTAAG+TGG - Chr3:57194006-57194025 None:intergenic 20.0%
!!! TCAAAGTAATCATATTTTAG+TGG - Chr3:57191902-57191921 None:intergenic 20.0%
!!! TGTTTTATTACTATTTGATG+AGG - Chr3:57191563-57191582 None:intergenic 20.0%
!!! TTAAGCCTAAATTTTTTTAG+AGG + Chr3:57194690-57194709 MsG0380014612.01.T01:intron 20.0%
!!! TTGTTTTACAAGTTATCAAT+GGG - Chr3:57191030-57191049 None:intergenic 20.0%
!!! TTTGTTTTACAAGTTATCAA+TGG - Chr3:57191031-57191050 None:intergenic 20.0%
!!! TTTTAATGACAATAGCAAAT+AGG + Chr3:57192225-57192244 MsG0380014612.01.T01:intron 20.0%
! AAAAGTTATGAACGTCAATT+TGG + Chr3:57194389-57194408 MsG0380014612.01.T01:intron 25.0%
! AAAATACCAATGAGTTTACA+AGG + Chr3:57192695-57192714 MsG0380014612.01.T01:CDS 25.0%
! AAAATGAAATCCAAAGACTT+TGG - Chr3:57193266-57193285 None:intergenic 25.0%
! AAGTTATTAACGGTACAATT+TGG + Chr3:57194447-57194466 MsG0380014612.01.T01:intron 25.0%
! ACAATTTCTAACAGCTAATT+GGG + Chr3:57192263-57192282 MsG0380014612.01.T01:intron 25.0%
! ACATGTTAAACTATCACTTA+TGG - Chr3:57193686-57193705 None:intergenic 25.0%
! ACGAACCAAAAATAAGTTAA+AGG - Chr3:57194473-57194492 None:intergenic 25.0%
! ACTGATAAACAAGAATGATT+TGG + Chr3:57195367-57195386 MsG0380014612.01.T01:CDS 25.0%
! AGAGAGAATAATACCTATAA+AGG - Chr3:57193909-57193928 None:intergenic 25.0%
! ATCGATAATGAGAAATTCTT+AGG + Chr3:57191487-57191506 MsG0380014612.01.T01:CDS 25.0%
! ATGTAACCAACAAATCTTAA+TGG - Chr3:57194416-57194435 None:intergenic 25.0%
! ATTAGCTGTTAGAAATTGTA+TGG - Chr3:57192262-57192281 None:intergenic 25.0%
! ATTATCGATGAGAAATTCTT+AGG - Chr3:57191767-57191786 None:intergenic 25.0%
! ATTGTACCGTTAATAACTTA+TGG - Chr3:57194446-57194465 None:intergenic 25.0%
! CCTTTATGTATTAGAGTTAA+GGG + Chr3:57194532-57194551 MsG0380014612.01.T01:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + Chr3:57194562-57194581 MsG0380014612.01.T01:intron 25.0%
! GAAACCAAAAAGTAAGTTAA+GGG + Chr3:57194594-57194613 MsG0380014612.01.T01:intron 25.0%
! GAGAAGAAGAAGAAAAAAAA+TGG - Chr3:57191966-57191985 None:intergenic 25.0%
! GAGAGAATAATACCTATAAA+GGG - Chr3:57193908-57193927 None:intergenic 25.0%
! GTAACCAACAAATAACTTAA+GGG + Chr3:57194654-57194673 MsG0380014612.01.T01:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - Chr3:57194673-57194654 None:intergenic 25.0%
! GTACTAAATGGAAAGTTTAT+TGG + Chr3:57192767-57192786 MsG0380014612.01.T01:CDS 25.0%
! GTGATAGTTTAACATGTTAT+TGG + Chr3:57193689-57193708 MsG0380014612.01.T01:intron 25.0%
! GTTTATTGGAAAAAAGTCAA+TGG + Chr3:57192781-57192800 MsG0380014612.01.T01:CDS 25.0%
! TAACTAAAAACCAACAAAGT+GGG + Chr3:57192066-57192085 MsG0380014612.01.T01:intron 25.0%
! TACAATTTCTAACAGCTAAT+TGG + Chr3:57192262-57192281 MsG0380014612.01.T01:intron 25.0%
! TCCTTTATGTATTAGAGTTA+AGG + Chr3:57194531-57194550 MsG0380014612.01.T01:intron 25.0%
! TGTAACCAACAAATAACTTA+AGG + Chr3:57194653-57194672 MsG0380014612.01.T01:intron 25.0%
! TGTAACCAACAAATAACTTA+AGG - Chr3:57194672-57194653 None:intergenic 25.0%
! TTGACATTATTTGGAAAGAA+AGG - Chr3:57193475-57193494 None:intergenic 25.0%
! TTGTACCGTTAATAACTTAT+GGG - Chr3:57194445-57194464 None:intergenic 25.0%
! TTTACTGAAAATTACTCTCT+TGG + Chr3:57192835-57192854 MsG0380014612.01.T01:CDS 25.0%
!! AAATTGACGTTCATAACTTT+TGG - Chr3:57194390-57194409 None:intergenic 25.0%
!! AAGTCTTTGGATTTCATTTT+CGG + Chr3:57193266-57193285 MsG0380014612.01.T01:intron 25.0%
!! AGTTATTTGTTGGTTACATT+TGG + Chr3:57194363-57194382 MsG0380014612.01.T01:intron 25.0%
!! CCTTTAATTTAAGTGGAAAA+GGG - Chr3:57193999-57194018 None:intergenic 25.0%
!! CCTTTTCCACTTAAATTAAA+GGG + Chr3:57193997-57194016 MsG0380014612.01.T01:intron 25.0%
!! TAGTCCCTCTAAAAAAATTT+AGG - Chr3:57194698-57194717 None:intergenic 25.0%
!! TTGTGTTAATTTAGGCATTT+TGG - Chr3:57191057-57191076 None:intergenic 25.0%
!!! AACTTATTTTTGGTTCGTTT+TGG + Chr3:57194475-57194494 MsG0380014612.01.T01:intron 25.0%
!!! AAGATTTGTTGGTTACATTT+TGG + Chr3:57194418-57194437 MsG0380014612.01.T01:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - Chr3:57194383-57194364 None:intergenic 25.0%
!!! TTCCGTATTTTTATTGTAAG+TGG - Chr3:57194812-57194831 None:intergenic 25.0%
!!! TTTGGCCTTTAACTTATTTT+TGG + Chr3:57194465-57194484 MsG0380014612.01.T01:intron 25.0%
!!! TTTTTTTTGTTTCGTTTGGT+TGG - Chr3:57191208-57191227 None:intergenic 25.0%
AAAAAGTCAATGGTGAGATT+TGG + Chr3:57192791-57192810 MsG0380014612.01.T01:CDS 30.0%
AAAACAAGCATTCAATCTCA+TGG + Chr3:57193756-57193775 MsG0380014612.01.T01:intron 30.0%
AAAACGAATCAAATAGTCTG+GGG + Chr3:57191120-57191139 MsG0380014612.01.T01:intron 30.0%
AAAGAACTACATCATGGAAT+TGG + Chr3:57194954-57194973 MsG0380014612.01.T01:CDS 30.0%
AAGAGAAGAAAAATGTGCTT+TGG + Chr3:57192174-57192193 MsG0380014612.01.T01:intron 30.0%
ACCTCTACTATAAAAAGTTC+AGG + Chr3:57193583-57193602 MsG0380014612.01.T01:intron 30.0%
AGAAAACGAATCAAATAGTC+TGG + Chr3:57191118-57191137 MsG0380014612.01.T01:intron 30.0%
AGAGAAGAAAAATGTGCTTT+GGG + Chr3:57192175-57192194 MsG0380014612.01.T01:intron 30.0%
AGAGGAAAAATTAAACCGAA+AGG - Chr3:57191633-57191652 None:intergenic 30.0%
AGTGTGTACCAACTTTAAAT+GGG + Chr3:57195180-57195199 MsG0380014612.01.T01:intron 30.0%
ATACCTCTTACTTTCTTATG+TGG - Chr3:57193078-57193097 None:intergenic 30.0%
ATACGGAATAGTACAAAAGA+TGG + Chr3:57194824-57194843 MsG0380014612.01.T01:intron 30.0%
ATAGTAGAGGTTTCCATAAT+TGG - Chr3:57193574-57193593 None:intergenic 30.0%
ATGAAGAAGATTTGTGAACT+TGG + Chr3:57191463-57191482 MsG0380014612.01.T01:CDS 30.0%
ATTAAACCGAAAGGAAATCA+TGG - Chr3:57191624-57191643 None:intergenic 30.0%
CCCTTAACTCTAATACATAA+AGG - Chr3:57194535-57194554 None:intergenic 30.0%
CGAAACCAAAAAGTAAGTTA+AGG + Chr3:57194593-57194612 MsG0380014612.01.T01:intron 30.0%
CTAATCAAAGAACTACATCA+TGG + Chr3:57194948-57194967 MsG0380014612.01.T01:CDS 30.0%
GAAAACGAATCAAATAGTCT+GGG + Chr3:57191119-57191138 MsG0380014612.01.T01:intron 30.0%
GATGATCTTGAAAAATGGAT+GGG - Chr3:57192442-57192461 None:intergenic 30.0%
GATGATGAAAATGACAATGT+TGG + Chr3:57192964-57192983 MsG0380014612.01.T01:CDS 30.0%
GTAAAAATTAAGTACCCAGT+TGG - Chr3:57192673-57192692 None:intergenic 30.0%
GTAACTAAAAACCAACAAAG+TGG + Chr3:57192065-57192084 MsG0380014612.01.T01:intron 30.0%
GTATAGCTCTTGACATTATT+TGG - Chr3:57193484-57193503 None:intergenic 30.0%
TATAGTATGTCACACTCTAT+TGG - Chr3:57193326-57193345 None:intergenic 30.0%
TCAAGAAGACAAATGGATAA+GGG - Chr3:57190811-57190830 None:intergenic 30.0%
TGTTTAATTGGATGAGTGTA+AGG - Chr3:57191536-57191555 None:intergenic 30.0%
TTAAACCGAAAGGAAATCAT+GGG - Chr3:57191623-57191642 None:intergenic 30.0%
TTCAAGAAGACAAATGGATA+AGG - Chr3:57190812-57190831 None:intergenic 30.0%
TTGGTCCCATAAGTTATTAA+CGG + Chr3:57194437-57194456 MsG0380014612.01.T01:intron 30.0%
TTTATCGGTAGATCAAATGA+AGG - Chr3:57191327-57191346 None:intergenic 30.0%
TTTCCTATCATACCCTTTAT+AGG + Chr3:57193893-57193912 MsG0380014612.01.T01:intron 30.0%
TTTCTTGCTTTCATCATTGT+TGG - Chr3:57191656-57191675 None:intergenic 30.0%
TTTGGTCCATTAAGATTTGT+TGG + Chr3:57194407-57194426 MsG0380014612.01.T01:intron 30.0%
! AACGCCTACGAATAATTTTA+AGG - Chr3:57194071-57194090 None:intergenic 30.0%
! AAGAGGTTGTTTGTGATTTT+TGG - Chr3:57191233-57191252 None:intergenic 30.0%
! AATTGATTAGTTAGCGTTGT+GGG + Chr3:57193345-57193364 MsG0380014612.01.T01:intron 30.0%
! ACGCCTACGAATAATTTTAA+GGG - Chr3:57194070-57194089 None:intergenic 30.0%
! AGTAAGAGGTATGTATAGTT+AGG + Chr3:57193086-57193105 MsG0380014612.01.T01:intron 30.0%
! ATACCTATAAAGGGTATGAT+AGG - Chr3:57193899-57193918 None:intergenic 30.0%
! CAAGTCTTTGAAGATTAGAT+TGG - Chr3:57192467-57192486 None:intergenic 30.0%
! CAGTTGAGATTTTAGATGAA+TGG + Chr3:57193004-57193023 MsG0380014612.01.T01:CDS 30.0%
! CCCTTTAATTTAAGTGGAAA+AGG - Chr3:57194000-57194019 None:intergenic 30.0%
! CCCTTTTCCACTTAAATTAA+AGG + Chr3:57193996-57194015 MsG0380014612.01.T01:intron 30.0%
! TAATTGATTAGTTAGCGTTG+TGG + Chr3:57193344-57193363 MsG0380014612.01.T01:intron 30.0%
! TCAATAACCCCATTTAAAGT+TGG - Chr3:57195191-57195210 None:intergenic 30.0%
! TCCTGAACTTTTTATAGTAG+AGG - Chr3:57193587-57193606 None:intergenic 30.0%
! TGATGAGGTGTTTGTTTAAT+TGG - Chr3:57191548-57191567 None:intergenic 30.0%
! TGATTACTTTGAGGAACTAT+AGG + Chr3:57191910-57191929 MsG0380014612.01.T01:intron 30.0%
!! ATTTGATTCGTTTTCTCTCT+TGG - Chr3:57191114-57191133 None:intergenic 30.0%
!! GTTTTAAATGGATGAGTGTA+AGG + Chr3:57191718-57191737 MsG0380014612.01.T01:intron 30.0%
!! TTGGTGGTGTTTGAATATAA+AGG + Chr3:57192868-57192887 MsG0380014612.01.T01:CDS 30.0%
!!! ACAGATTCATTTTTTGTTGC+AGG - Chr3:57192013-57192032 None:intergenic 30.0%
!!! ACTTTTTTAGGTGAAGCAAA+TGG - Chr3:57193736-57193755 None:intergenic 30.0%
!!! ATCCTTATTTTTACCACACT+GGG + Chr3:57193526-57193545 MsG0380014612.01.T01:intron 30.0%
!!! ATGAGGTGTTGTGTTTTAAA+TGG + Chr3:57191706-57191725 MsG0380014612.01.T01:intron 30.0%
!!! CTTACTTTTTGGTTTCGTTT+TGG - Chr3:57194590-57194609 None:intergenic 30.0%
!!! GGTGTTTTTTTTGTTTCGTT+TGG - Chr3:57191212-57191231 None:intergenic 30.0%
!!! TATCCTTATTTTTACCACAC+TGG + Chr3:57193525-57193544 MsG0380014612.01.T01:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - Chr3:57194570-57194589 None:intergenic 30.0%
AATACTTCCATGACATTGCT+TGG - Chr3:57194272-57194291 None:intergenic 35.0%
AATGAGTTTACAAGGAGACA+TGG + Chr3:57192703-57192722 MsG0380014612.01.T01:CDS 35.0%
AATGGCGAAAATCTCGTTAA+TGG + Chr3:57190890-57190909 MsG0380014612.01.T01:CDS 35.0%
ACTTGCTCTACATGAACATT+GGG - Chr3:57194296-57194315 None:intergenic 35.0%
ACTTTCCATTTAGTACCATC+AGG - Chr3:57192763-57192782 None:intergenic 35.0%
ATACTTCCATGACATTGCTT+GGG - Chr3:57194271-57194290 None:intergenic 35.0%
ATGTCTATGACCAAAGTCTT+TGG + Chr3:57193253-57193272 MsG0380014612.01.T01:intron 35.0%
ATGTCTCCTTGTAAACTCAT+TGG - Chr3:57192704-57192723 None:intergenic 35.0%
ATTAGTCACATTGAACAGCA+TGG + Chr3:57193400-57193419 MsG0380014612.01.T01:intron 35.0%
CAGTGTGTACCAACTTTAAA+TGG + Chr3:57195179-57195198 MsG0380014612.01.T01:intron 35.0%
CTACTCATCTAGCAGAAAAT+CGG + Chr3:57195053-57195072 MsG0380014612.01.T01:CDS 35.0%
GAAAATTACTCTCTTGGACA+TGG + Chr3:57192841-57192860 MsG0380014612.01.T01:CDS 35.0%
GAAACAAAGCTTCATATGTG+TGG - Chr3:57193872-57193891 None:intergenic 35.0%
GAATACTAATTTGACACCGT+TGG + Chr3:57192639-57192658 MsG0380014612.01.T01:intron 35.0%
GGATGATCTTGAAAAATGGA+TGG - Chr3:57192443-57192462 None:intergenic 35.0%
GTCCCCTTAAAATTATTCGT+AGG + Chr3:57194064-57194083 MsG0380014612.01.T01:intron 35.0%
GTGTGTACCAACTTTAAATG+GGG + Chr3:57195181-57195200 MsG0380014612.01.T01:intron 35.0%
TAATACATAAAGGACCAGAG+TGG - Chr3:57194525-57194544 None:intergenic 35.0%
TACACAAATATATGCAGCTG+TGG + Chr3:57194916-57194935 MsG0380014612.01.T01:intron 35.0%
TACCCAGTGTGGTAAAAATA+AGG - Chr3:57193531-57193550 None:intergenic 35.0%
TACTCATCTAGCAGAAAATC+GGG + Chr3:57195054-57195073 MsG0380014612.01.T01:CDS 35.0%
TACTTGCTCTACATGAACAT+TGG - Chr3:57194297-57194316 None:intergenic 35.0%
TCTTGAAAAATGGATGGGAA+AGG - Chr3:57192437-57192456 None:intergenic 35.0%
TGAATTAACTCCCACTTTGT+TGG - Chr3:57192079-57192098 None:intergenic 35.0%
TGGAGGATGATCTTGAAAAA+TGG - Chr3:57192447-57192466 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + Chr3:57194353-57194372 MsG0380014612.01.T01:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - Chr3:57194372-57194353 None:intergenic 35.0%
TTTCTAACAGCTAATTGGGA+AGG + Chr3:57192267-57192286 MsG0380014612.01.T01:intron 35.0%
! CGCCTACGAATAATTTTAAG+GGG - Chr3:57194069-57194088 None:intergenic 35.0%
! GATTTTCTGCTAGATGAGTA+GGG - Chr3:57195054-57195073 None:intergenic 35.0%
! GTCTTTGAAGATTAGATTGG+AGG - Chr3:57192464-57192483 None:intergenic 35.0%
! TATGTATAGTTAGGCTTGGT+CGG + Chr3:57193095-57193114 MsG0380014612.01.T01:intron 35.0%
! TGCATTTTCCTGCACAAAAA+GGG + Chr3:57190951-57190970 MsG0380014612.01.T01:intron 35.0%
! TTGCATTTTCCTGCACAAAA+AGG + Chr3:57190950-57190969 MsG0380014612.01.T01:intron 35.0%
!! ACATTTCTAGCCTCACAATA+AGG - Chr3:57195274-57195293 None:intergenic 35.0%
!! AGATTTGGTTTGAAAAGGGT+TGG + Chr3:57192806-57192825 MsG0380014612.01.T01:CDS 35.0%
!! AGTCTATTTCTACTGCATTC+TGG - Chr3:57192924-57192943 None:intergenic 35.0%
!! CTTTGGGATCAATTATGCAA+AGG + Chr3:57192191-57192210 MsG0380014612.01.T01:intron 35.0%
!! GGTGAGATTTGGTTTGAAAA+GGG + Chr3:57192802-57192821 MsG0380014612.01.T01:CDS 35.0%
!! GTTTGACGGATTAAGAGTTA+AGG - Chr3:57194503-57194522 None:intergenic 35.0%
!! TGGTCCCTTAACTTACTTTT+TGG - Chr3:57194601-57194620 None:intergenic 35.0%
!! TGGTGAGATTTGGTTTGAAA+AGG + Chr3:57192801-57192820 MsG0380014612.01.T01:CDS 35.0%
AACTTATCATCTACCCAGTG+TGG - Chr3:57193542-57193561 None:intergenic 40.0%
AAGTATGTGATGCTGCAGAT+TGG + Chr3:57195221-57195240 MsG0380014612.01.T01:CDS 40.0%
AATCAGGCTAAGGTCATCTT+TGG - Chr3:57193383-57193402 None:intergenic 40.0%
ACACAAACTATGCACCACAT+TGG - Chr3:57194150-57194169 None:intergenic 40.0%
ACATCATGGAATTGGCCAAA+GGG + Chr3:57194962-57194981 MsG0380014612.01.T01:CDS 40.0%
ACATGTTATTGGCATCCTAC+TGG + Chr3:57193700-57193719 MsG0380014612.01.T01:intron 40.0%
ACCACTTTCTCTTGCAAACA+GGG - Chr3:57195318-57195337 None:intergenic 40.0%
ACCCTTGCTCTAGTGTAATA+CGG + Chr3:57194121-57194140 MsG0380014612.01.T01:intron 40.0%
AGAGTCCTGATGGTACTAAA+TGG + Chr3:57192755-57192774 MsG0380014612.01.T01:CDS 40.0%
AGTATGTGATGCTGCAGATT+GGG + Chr3:57195222-57195241 MsG0380014612.01.T01:CDS 40.0%
AGTTGAGCAGCTTCCAATTA+TGG + Chr3:57193558-57193577 MsG0380014612.01.T01:intron 40.0%
ATCGGTAGATCAAATGAAGG+TGG - Chr3:57191324-57191343 None:intergenic 40.0%
CAATGTGACTAATCAGGCTA+AGG - Chr3:57193393-57193412 None:intergenic 40.0%
CGACCACATAAGAAAGTAAG+AGG + Chr3:57193072-57193091 MsG0380014612.01.T01:CDS 40.0%
CTCTTCCCATGATTTCCTTT+CGG + Chr3:57191615-57191634 MsG0380014612.01.T01:intron 40.0%
CTTACTTTCTTATGTGGTCG+AGG - Chr3:57193072-57193091 None:intergenic 40.0%
CTTTGCCAACATTTCGCTAA+TGG + Chr3:57190872-57190891 MsG0380014612.01.T01:CDS 40.0%
GAGGTATGTATAGTTAGGCT+TGG + Chr3:57193091-57193110 MsG0380014612.01.T01:intron 40.0%
GAGTGTAAGGATGACATGTT+GGG + Chr3:57191731-57191750 MsG0380014612.01.T01:intron 40.0%
GAGTGTAAGGATGACATGTT+GGG - Chr3:57191750-57191731 None:intergenic 40.0%
GCGAACTTCAAGAAGACAAA+TGG - Chr3:57190818-57190837 None:intergenic 40.0%
GCTGTTCAATGTGACTAATC+AGG - Chr3:57193399-57193418 None:intergenic 40.0%
GGAAATGCTTCCTTATTGTG+AGG + Chr3:57195261-57195280 MsG0380014612.01.T01:CDS 40.0%
TACATCATGGAATTGGCCAA+AGG + Chr3:57194961-57194980 MsG0380014612.01.T01:CDS 40.0%
TATCTGCTTATGCACCAATG+AGG + Chr3:57190772-57190791 MsG0380014612.01.T01:CDS 40.0%
TCGTTTGGTTGGACATTGAT+GGG - Chr3:57191197-57191216 None:intergenic 40.0%
TGAGTGTAAGGATGACATGT+TGG + Chr3:57191730-57191749 MsG0380014612.01.T01:intron 40.0%
TGAGTGTAAGGATGACATGT+TGG - Chr3:57191749-57191730 None:intergenic 40.0%
TGCACAAAAAGGGTTGAGTA+AGG + Chr3:57190961-57190980 MsG0380014612.01.T01:intron 40.0%
TGCTTTCATCATTGTTGGAG+AGG - Chr3:57191651-57191670 None:intergenic 40.0%
TGGCGAAAATCTTGTGAACT+TGG + Chr3:57190910-57190929 MsG0380014612.01.T01:CDS 40.0%
TGTGGTCGAGGAGAAAATAA+TGG - Chr3:57193060-57193079 None:intergenic 40.0%
TGTTTCTCTGTTGTCGTAAG+AGG - Chr3:57191250-57191269 None:intergenic 40.0%
TTCCTCATTTGTGAGAAGCT+TGG + Chr3:57193647-57193666 MsG0380014612.01.T01:intron 40.0%
TTCGTTTGGTTGGACATTGA+TGG - Chr3:57191198-57191217 None:intergenic 40.0%
TTGGAAAGAAAGGAACGTGT+TGG - Chr3:57193465-57193484 None:intergenic 40.0%
TTGGGAAAAGATCAGGAATC+TGG + Chr3:57195240-57195259 MsG0380014612.01.T01:CDS 40.0%
TTTCGCCATTAGCGAAATGT+TGG - Chr3:57190880-57190899 None:intergenic 40.0%
! ACGTACGTATGCTGTTCTTT+TGG - Chr3:57192036-57192055 None:intergenic 40.0%
! CGATTTTCTGCTAGATGAGT+AGG - Chr3:57195055-57195074 None:intergenic 40.0%
! TCATGATGCTTGACGTTTTC+AGG - Chr3:57194865-57194884 None:intergenic 40.0%
! TTACTCAACCCTTTTTGTGC+AGG - Chr3:57190962-57190981 None:intergenic 40.0%
!! ATGTGTGTTGTTTGTGAGGA+TGG - Chr3:57194183-57194202 None:intergenic 40.0%
!! GTTGATGTGTGTTGTTTGTG+AGG - Chr3:57194187-57194206 None:intergenic 40.0%
AAAGGACCAGAGTGGTTTGA+CGG - Chr3:57194517-57194536 None:intergenic 45.0%
AAGGAAATCATGGGAAGAGG+TGG - Chr3:57191614-57191633 None:intergenic 45.0%
AATGCTTTCCGGTGGTTGTT+TGG - Chr3:57191156-57191175 None:intergenic 45.0%
ACCCGTATTACACTAGAGCA+AGG - Chr3:57194126-57194145 None:intergenic 45.0%
AGAGAAAGTGGTCTGCAAGT+AGG + Chr3:57195326-57195345 MsG0380014612.01.T01:CDS 45.0%
AGCCAAGCTTCTCACAAATG+AGG - Chr3:57193652-57193671 None:intergenic 45.0%
ATCACAACACATCAACAGCC+AGG + Chr3:57194224-57194243 MsG0380014612.01.T01:intron 45.0%
ATGTTGGCAAAGTTCCAGAG+AGG - Chr3:57190864-57190883 None:intergenic 45.0%
CATTTCTCCTAGCCATGGAA+TGG - Chr3:57192411-57192430 None:intergenic 45.0%
CATTTGTGAGAAGCTTGGCT+TGG + Chr3:57193652-57193671 MsG0380014612.01.T01:intron 45.0%
CCCGTATTACACTAGAGCAA+GGG - Chr3:57194125-57194144 None:intergenic 45.0%
CCCTTGCTCTAGTGTAATAC+GGG + Chr3:57194122-57194141 MsG0380014612.01.T01:intron 45.0%
CGAAAGGAAATCATGGGAAG+AGG - Chr3:57191617-57191636 None:intergenic 45.0%
CTGCAGATTGGGAAAAGATC+AGG + Chr3:57195233-57195252 MsG0380014612.01.T01:CDS 45.0%
CTTAATCCGTCAAACCACTC+TGG + Chr3:57194508-57194527 MsG0380014612.01.T01:intron 45.0%
GACCACTTTCTCTTGCAAAC+AGG - Chr3:57195319-57195338 None:intergenic 45.0%
GGAAGAGGTGGAAAGATAGA+TGG - Chr3:57191602-57191621 None:intergenic 45.0%
GGCTGTTGATGTGTTGTGAT+GGG - Chr3:57194224-57194243 None:intergenic 45.0%
GGTCGAGGAGAAAATAATGG+CGG - Chr3:57193057-57193076 None:intergenic 45.0%
GTGTAATACGGGTTCCAATG+TGG + Chr3:57194133-57194152 MsG0380014612.01.T01:intron 45.0%
TCAGGACTCTTGATCAACAC+TGG - Chr3:57192745-57192764 None:intergenic 45.0%
TCATCTAGCAGAAAATCGGG+TGG + Chr3:57195057-57195076 MsG0380014612.01.T01:CDS 45.0%
TCCCTGTTTGCAAGAGAAAG+TGG + Chr3:57195314-57195333 MsG0380014612.01.T01:CDS 45.0%
TGGCTGTTGATGTGTTGTGA+TGG - Chr3:57194225-57194244 None:intergenic 45.0%
TGTGCAGGAAAATGCAAGCA+AGG - Chr3:57190947-57190966 None:intergenic 45.0%
TTAGTTAGCGTTGTGGGAGT+TGG + Chr3:57193351-57193370 MsG0380014612.01.T01:intron 45.0%
TTCGCTGATGACTTCGCTAA+TGG + Chr3:57190833-57190852 MsG0380014612.01.T01:CDS 45.0%
! GTGCATAGTTTGTGTGCCAT+TGG + Chr3:57194155-57194174 MsG0380014612.01.T01:intron 45.0%
! GTGTGTCGTTGAATGCTTTC+CGG - Chr3:57191167-57191186 None:intergenic 45.0%
! GTGTTGATCAAGAGTCCTGA+TGG + Chr3:57192745-57192764 MsG0380014612.01.T01:CDS 45.0%
!! TGATGTGTTGTGATGGGTGT+GGG - Chr3:57194218-57194237 None:intergenic 45.0%
!! TTGATGTGTTGTGATGGGTG+TGG - Chr3:57194219-57194238 None:intergenic 45.0%
!! TTGGACATTGATGGGTTTCG+TGG - Chr3:57191189-57191208 None:intergenic 45.0%
!!! TCCGGTGGTTGTTTGGTTTT+CGG - Chr3:57191149-57191168 None:intergenic 45.0%
!!! TAATTTTATAGATAAAATTT+TGG + Chr3:57194318-57194337 MsG0380014612.01.T01:intron 5.0%
AAATGAAGGTGGTGCGACGA+GGG - Chr3:57191313-57191332 None:intergenic 50.0%
AATGGCAGCTATGCACCAGT+AGG - Chr3:57193718-57193737 None:intergenic 50.0%
ACAAATGGATAAGGGCGACG+TGG - Chr3:57190803-57190822 None:intergenic 50.0%
ACAGAGAAACAACCGCACGT+CGG + Chr3:57191259-57191278 MsG0380014612.01.T01:intron 50.0%
ATCAACAGCCAGGAGCTCAA+TGG + Chr3:57194234-57194253 MsG0380014612.01.T01:intron 50.0%
ATGGCACCCAAGCAATGTCA+TGG + Chr3:57194262-57194281 MsG0380014612.01.T01:intron 50.0%
CCACTTCACACTCCATTCCA+TGG + Chr3:57192396-57192415 MsG0380014612.01.T01:intron 50.0%
CCAGTTGGTCAGTAAGCCAA+CGG - Chr3:57192658-57192677 None:intergenic 50.0%
CCATGGAATGGAGTGTGAAG+TGG - Chr3:57192399-57192418 None:intergenic 50.0%
CCCGAAAACCAAACAACCAC+CGG + Chr3:57191145-57191164 MsG0380014612.01.T01:intron 50.0%
CTAGAAATGTTCGCCGCTCT+CGG + Chr3:57195284-57195303 MsG0380014612.01.T01:CDS 50.0%
CTCTCTTGGACATGGCTGTT+TGG + Chr3:57192849-57192868 MsG0380014612.01.T01:CDS 50.0%
CTGCTTATGCACCAATGAGG+TGG + Chr3:57190775-57190794 MsG0380014612.01.T01:CDS 50.0%
GGTAGCATTTCTCCTAGCCA+TGG - Chr3:57192416-57192435 None:intergenic 50.0%
GTTTGTGAGGATGGCACCAA+TGG - Chr3:57194174-57194193 None:intergenic 50.0%
TCACACTCCATTCCATGGCT+AGG + Chr3:57192401-57192420 MsG0380014612.01.T01:intron 50.0%
TCTTGGACATGGCTGTTTGG+TGG + Chr3:57192852-57192871 MsG0380014612.01.T01:CDS 50.0%
TGTCGTTGAATGCTTTCCGG+TGG - Chr3:57191164-57191183 None:intergenic 50.0%
! TGACATTGCTTGGGTGCCAT+TGG - Chr3:57194262-57194281 None:intergenic 50.0%
!! CGTTGGCTTACTGACCAACT+GGG + Chr3:57192656-57192675 MsG0380014612.01.T01:intron 50.0%
!!! CCGGTGGTTGTTTGGTTTTC+GGG - Chr3:57191148-57191167 None:intergenic 50.0%
AACCGCACGTCGGAAAGGTA+CGG + Chr3:57191269-57191288 MsG0380014612.01.T01:intron 55.0%
CAAATGAAGGTGGTGCGACG+AGG - Chr3:57191314-57191333 None:intergenic 55.0%
CAGGAGCTCAATGGCACCAA+TGG + Chr3:57194243-57194262 MsG0380014612.01.T01:intron 55.0%
CGCTAATGGCGAAACCTCTC+TGG + Chr3:57190847-57190866 MsG0380014612.01.T01:CDS 55.0%
GAAACAACCGCACGTCGGAA+AGG + Chr3:57191264-57191283 MsG0380014612.01.T01:intron 55.0%
! TCCTGAGCTCTAGCTCCCTT+TGG - Chr3:57194980-57194999 None:intergenic 55.0%
!! CATTGGTGCCATTGAGCTCC+TGG - Chr3:57194245-57194264 None:intergenic 55.0%
!! CCGTTGGCTTACTGACCAAC+TGG + Chr3:57192655-57192674 MsG0380014612.01.T01:intron 55.0%
CACCGTACCTTTCCGACGTG+CGG - Chr3:57191274-57191293 None:intergenic 60.0%
GAAATGTTCGCCGCTCTCGG+CGG + Chr3:57195287-57195306 MsG0380014612.01.T01:CDS 60.0%
GCCAAAGGGAGCTAGAGCTC+AGG + Chr3:57194976-57194995 MsG0380014612.01.T01:CDS 60.0%
! GTCGGAAAGGTACGGTGGTG+CGG + Chr3:57191277-57191296 MsG0380014612.01.T01:intron 60.0%
GCGACGTGGAGCCACCTCAT+TGG - Chr3:57190789-57190808 None:intergenic 65.0%
! CGCACGTCGGAAAGGTACGG+TGG + Chr3:57191272-57191291 MsG0380014612.01.T01:intron 65.0%
! GGAAAGGTACGGTGGTGCGG+AGG + Chr3:57191280-57191299 MsG0380014612.01.T01:intron 65.0%
CAGGGACCAACCGCCGAGAG+CGG - Chr3:57195300-57195319 None:intergenic 70.0%
TGTTCGCCGCTCTCGGCGGT+TGG + Chr3:57195291-57195310 MsG0380014612.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 57190764 57195424 57190764 ID=MsG0380014612.01;Name=MsG0380014612.01
Chr3 mRNA 57190764 57195424 57190764 ID=MsG0380014612.01.T01;Parent=MsG0380014612.01;Name=MsG0380014612.01.T01;_AED=0.63;_eAED=0.63;_QI=0|0|0|0.6|1|1|5|0|355
Chr3 exon 57190764 57190931 57190764 ID=MsG0380014612.01.T01:exon:16197;Parent=MsG0380014612.01.T01
Chr3 exon 57191397 57191508 57191397 ID=MsG0380014612.01.T01:exon:16198;Parent=MsG0380014612.01.T01
Chr3 exon 57192695 57193093 57192695 ID=MsG0380014612.01.T01:exon:16199;Parent=MsG0380014612.01.T01
Chr3 exon 57194933 57195078 57194933 ID=MsG0380014612.01.T01:exon:16200;Parent=MsG0380014612.01.T01
Chr3 exon 57195182 57195424 57195182 ID=MsG0380014612.01.T01:exon:16201;Parent=MsG0380014612.01.T01
Chr3 CDS 57190764 57190931 57190764 ID=MsG0380014612.01.T01:cds;Parent=MsG0380014612.01.T01
Chr3 CDS 57191397 57191508 57191397 ID=MsG0380014612.01.T01:cds;Parent=MsG0380014612.01.T01
Chr3 CDS 57192695 57193093 57192695 ID=MsG0380014612.01.T01:cds;Parent=MsG0380014612.01.T01
Chr3 CDS 57194933 57195078 57194933 ID=MsG0380014612.01.T01:cds;Parent=MsG0380014612.01.T01
Chr3 CDS 57195182 57195424 57195182 ID=MsG0380014612.01.T01:cds;Parent=MsG0380014612.01.T01
Gene Sequence

>MsG0380014612.01.T01

ATGCTGGATATCTGCTTATGCACCAATGAGGTGGCTCCACGTCGCCCTTATCCATTTGTCTTCTTGAAGTTCGCTGATGACTTCGCTAATGGCGAAACCTCTCTGGAACTTTGCCAACATTTCGCTAATGGCGAAAATCTCGTTAATGGCGAAAATCTTGTGAACTTGAAACAAATTTTTATTGAAAGGCGAATGAAGAAGATTTGTGAAGAAAACAAATTTTATGAAAGGCGAATGAAGAAGATTTGTGAACTTGGAATCGATAATGAGAAATTCTTAGAAAATACCAATGAGTTTACAAGGAGACATGGAGATAGTTTATCAAATCCAGTGTTGATCAAGAGTCCTGATGGTACTAAATGGAAAGTTTATTGGAAAAAAGTCAATGGTGAGATTTGGTTTGAAAAGGGTTGGAAATATTTTACTGAAAATTACTCTCTTGGACATGGCTGTTTGGTGGTGTTTGAATATAAAGGAACTTCAAAGTTTGATGTATTAATACTTGGCCAGAATGCAGTAGAAATAGACTATGATATTTCATGTGACACTGATGATGAAAATGACAATGTTGGTCATAGTGATGATGAATCAGTTGAGATTTTAGATGAATGGCAAAATCAGAAGAGTACTAGAAAAAAGCCGCCATTATTTTCTCCTCGACCACATAAGAAAGTAAGAGCTGTGGTAATGAAGACTAATCAAAGAACTACATCATGGAATTGGCCAAAGGGAGCTAGAGCTCAGGAAGTAACTTTAAAATTCGTCTCAAACAATCCTTTTTTCACAATTCTCATAAACCCTACTCATCTAGCAGAAAATCGGGTGTGTGTACCAACTTTAAATGGGGTTATTGAGAACAAAGAAAAGTATGTGATGCTGCAGATTGGGAAAAGATCAGGAATCTGGAAATGCTTCCTTATTGTGAGGCTAGAAATGTTCGCCGCTCTCGGCGGTTGGTCCCTGTTTGCAAGAGAAAGTGGTCTGCAAGTAGGAGATGTTTGTGTCTTTGAACTGATAAACAAGAATGATTTGGTTTTTAATGTTCATATTACCAAAAGTGACCGTTAA
Protein sequence

>MsG0380014612.01.T01

MLDICLCTNEVAPRRPYPFVFLKFADDFANGETSLELCQHFANGENLVNGENLVNLKQIFIERRMKKICEENKFYERRMKKICELGIDNEKFLENTNEFTRRHGDSLSNPVLIKSPDGTKWKVYWKKVNGEIWFEKGWKYFTENYSLGHGCLVVFEYKGTSKFDVLILGQNAVEIDYDISCDTDDENDNVGHSDDESVEILDEWQNQKSTRKKPPLFSPRPHKKVRAVVMKTNQRTTSWNWPKGARAQEVTLKFVSNNPFFTILINPTHLAENRVCVPTLNGVIENKEKYVMLQIGKRSGIWKCFLIVRLEMFAALGGWSLFARESGLQVGDVCVFELINKNDLVFNVHITKSDR*