Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015521.01.T01 | XP_024642201.2 | 73.171 | 205 | 40 | 2 | 2 | 191 | 149 | 353 | 1.41E-90 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015521.01.T01 | A0A072UAK7 | 73.171 | 205 | 40 | 2 | 2 | 191 | 149 | 353 | 6.72e-91 | 283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380015521.01 | MsG0380015522.01 | 0.837724 | 4.389918e-57 | 5.753501e-54 |
| MsG0380015521.01 | MsG0580024908.01 | 0.839019 | 2.034830e-57 | 2.774084e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015521.01.T01 | MTR_6g045333 | 73.171 | 205 | 40 | 2 | 2 | 191 | 149 | 353 | 1.71e-94 | 283 |
| MsG0380015521.01.T01 | MTR_3g071850 | 71.220 | 205 | 44 | 2 | 2 | 191 | 112 | 316 | 4.95e-87 | 274 |
| MsG0380015521.01.T01 | MTR_3g071790 | 83.784 | 148 | 22 | 1 | 46 | 191 | 1 | 148 | 4.33e-77 | 230 |
| MsG0380015521.01.T01 | MTR_0009s0080 | 53.591 | 181 | 81 | 3 | 13 | 191 | 129 | 308 | 1.45e-49 | 167 |
| MsG0380015521.01.T01 | MTR_5g007410 | 54.857 | 175 | 75 | 2 | 21 | 191 | 143 | 317 | 1.42e-48 | 165 |
| MsG0380015521.01.T01 | MTR_5g045170 | 52.632 | 171 | 80 | 1 | 21 | 191 | 131 | 300 | 6.02e-45 | 154 |
| MsG0380015521.01.T01 | MTR_5g045510 | 53.503 | 157 | 73 | 0 | 22 | 178 | 128 | 284 | 7.67e-45 | 153 |
| MsG0380015521.01.T01 | MTR_5g061410 | 46.154 | 169 | 89 | 1 | 24 | 192 | 102 | 268 | 9.49e-41 | 140 |
| MsG0380015521.01.T01 | MTR_2g036470 | 49.721 | 179 | 76 | 4 | 23 | 194 | 135 | 306 | 5.77e-40 | 141 |
| MsG0380015521.01.T01 | MTR_5g039470 | 46.111 | 180 | 88 | 3 | 21 | 193 | 99 | 276 | 9.88e-38 | 134 |
| MsG0380015521.01.T01 | MTR_1g059860 | 43.128 | 211 | 86 | 4 | 13 | 191 | 53 | 261 | 1.37e-36 | 130 |
| MsG0380015521.01.T01 | MTR_5g063950 | 41.520 | 171 | 91 | 3 | 24 | 192 | 105 | 268 | 1.64e-31 | 118 |
| MsG0380015521.01.T01 | MTR_7g026500 | 43.182 | 176 | 95 | 4 | 16 | 191 | 135 | 305 | 1.20e-30 | 116 |
| MsG0380015521.01.T01 | MTR_5g039490 | 49.306 | 144 | 66 | 2 | 21 | 160 | 140 | 280 | 1.27e-29 | 113 |
| MsG0380015521.01.T01 | MTR_5g073420 | 37.158 | 183 | 101 | 6 | 9 | 191 | 120 | 288 | 8.81e-29 | 111 |
| MsG0380015521.01.T01 | MTR_5g039450 | 42.038 | 157 | 82 | 3 | 45 | 193 | 126 | 281 | 5.89e-27 | 105 |
| MsG0380015521.01.T01 | MTR_5g031970 | 42.775 | 173 | 73 | 5 | 21 | 192 | 120 | 267 | 1.15e-26 | 105 |
| MsG0380015521.01.T01 | MTR_5g054920 | 44.628 | 121 | 63 | 2 | 71 | 191 | 2 | 118 | 4.66e-26 | 100 |
| MsG0380015521.01.T01 | MTR_5g024050 | 59.551 | 89 | 33 | 2 | 46 | 131 | 1 | 89 | 1.44e-25 | 96.3 |
| MsG0380015521.01.T01 | MTR_1g066830 | 35.106 | 188 | 116 | 3 | 8 | 191 | 112 | 297 | 2.04e-25 | 102 |
| MsG0380015521.01.T01 | MTR_5g058000 | 41.209 | 182 | 90 | 5 | 14 | 191 | 117 | 285 | 3.10e-24 | 99.0 |
| MsG0380015521.01.T01 | MTR_5g058100 | 39.106 | 179 | 98 | 6 | 18 | 191 | 122 | 294 | 9.85e-24 | 97.8 |
| MsG0380015521.01.T01 | MTR_1g108820 | 37.705 | 183 | 99 | 4 | 21 | 192 | 121 | 299 | 1.18e-23 | 97.1 |
| MsG0380015521.01.T01 | MTR_1g108820 | 37.158 | 183 | 100 | 4 | 21 | 192 | 121 | 299 | 3.96e-23 | 95.9 |
| MsG0380015521.01.T01 | MTR_1g108800 | 41.358 | 162 | 70 | 4 | 32 | 182 | 99 | 246 | 1.60e-22 | 93.6 |
| MsG0380015521.01.T01 | MTR_2g007400 | 37.288 | 177 | 87 | 5 | 25 | 193 | 147 | 307 | 1.46e-19 | 86.3 |
| MsG0380015521.01.T01 | MTR_5g073340 | 38.764 | 178 | 97 | 7 | 20 | 191 | 99 | 270 | 3.74e-19 | 84.0 |
| MsG0380015521.01.T01 | MTR_1g085120 | 39.645 | 169 | 89 | 5 | 31 | 192 | 307 | 469 | 8.53e-19 | 84.3 |
| MsG0380015521.01.T01 | MTR_1089s0010 | 37.791 | 172 | 91 | 6 | 24 | 191 | 128 | 287 | 3.03e-18 | 82.4 |
| MsG0380015521.01.T01 | MTR_1g085120 | 36.649 | 191 | 108 | 5 | 8 | 191 | 197 | 381 | 3.79e-18 | 82.4 |
| MsG0380015521.01.T01 | MTR_1g085120 | 36.649 | 191 | 108 | 5 | 8 | 191 | 272 | 456 | 3.89e-18 | 82.4 |
| MsG0380015521.01.T01 | MTR_6g040270 | 33.143 | 175 | 99 | 5 | 23 | 191 | 127 | 289 | 3.77e-17 | 79.3 |
| MsG0380015521.01.T01 | MTR_5g073370 | 36.898 | 187 | 103 | 6 | 9 | 191 | 113 | 288 | 5.61e-17 | 79.0 |
| MsG0380015521.01.T01 | MTR_6g011460 | 36.022 | 186 | 109 | 4 | 8 | 191 | 151 | 328 | 1.05e-16 | 78.2 |
| MsG0380015521.01.T01 | MTR_3g107100 | 37.356 | 174 | 90 | 6 | 26 | 192 | 135 | 296 | 1.16e-16 | 78.2 |
| MsG0380015521.01.T01 | MTR_4g039440 | 34.066 | 182 | 98 | 7 | 22 | 191 | 148 | 319 | 1.21e-16 | 78.2 |
| MsG0380015521.01.T01 | MTR_7g007340 | 38.012 | 171 | 80 | 7 | 23 | 187 | 108 | 258 | 1.26e-16 | 77.8 |
| MsG0380015521.01.T01 | MTR_5g076150 | 34.759 | 187 | 102 | 6 | 23 | 191 | 22 | 206 | 1.68e-16 | 75.9 |
| MsG0380015521.01.T01 | MTR_7g055943 | 35.227 | 176 | 99 | 5 | 22 | 191 | 159 | 325 | 6.04e-16 | 75.9 |
| MsG0380015521.01.T01 | MTR_7g098570 | 34.239 | 184 | 107 | 6 | 21 | 199 | 135 | 309 | 9.89e-16 | 75.5 |
| MsG0380015521.01.T01 | MTR_6g022360 | 33.880 | 183 | 105 | 5 | 16 | 191 | 143 | 316 | 1.89e-15 | 74.7 |
| MsG0380015521.01.T01 | MTR_5g065100 | 33.889 | 180 | 86 | 3 | 24 | 203 | 125 | 271 | 3.17e-15 | 73.9 |
| MsG0380015521.01.T01 | MTR_7g034120 | 34.091 | 176 | 98 | 5 | 22 | 192 | 61 | 223 | 9.65e-15 | 72.0 |
| MsG0380015521.01.T01 | MTR_7g007370 | 35.673 | 171 | 87 | 7 | 25 | 189 | 96 | 249 | 1.56e-14 | 71.6 |
| MsG0380015521.01.T01 | MTR_7g098510 | 33.880 | 183 | 111 | 3 | 20 | 199 | 132 | 307 | 1.99e-14 | 71.6 |
| MsG0380015521.01.T01 | MTR_7g007080 | 32.979 | 188 | 102 | 8 | 23 | 203 | 129 | 299 | 2.10e-14 | 71.6 |
| MsG0380015521.01.T01 | MTR_2g005990 | 33.333 | 177 | 95 | 5 | 22 | 191 | 137 | 297 | 2.28e-14 | 71.2 |
| MsG0380015521.01.T01 | MTR_3g107120 | 33.333 | 204 | 109 | 7 | 10 | 203 | 129 | 315 | 2.57e-14 | 71.2 |
| MsG0380015521.01.T01 | MTR_6g022500 | 33.333 | 174 | 105 | 6 | 22 | 191 | 220 | 386 | 5.04e-14 | 70.5 |
| MsG0380015521.01.T01 | MTR_1g107385 | 32.353 | 204 | 109 | 8 | 23 | 214 | 166 | 352 | 8.75e-14 | 69.7 |
| MsG0380015521.01.T01 | MTR_5g083890 | 30.693 | 202 | 110 | 7 | 23 | 210 | 142 | 327 | 1.05e-13 | 69.7 |
| MsG0380015521.01.T01 | MTR_7g056433 | 34.848 | 198 | 107 | 9 | 12 | 202 | 124 | 306 | 1.13e-13 | 69.3 |
| MsG0380015521.01.T01 | MTR_5g024060 | 37.500 | 96 | 57 | 2 | 98 | 191 | 26 | 120 | 2.44e-13 | 67.4 |
| MsG0380015521.01.T01 | MTR_3g108150 | 39.344 | 183 | 89 | 9 | 20 | 192 | 125 | 295 | 3.40e-12 | 65.1 |
| MsG0380015521.01.T01 | MTR_2g008310 | 32.955 | 176 | 94 | 6 | 22 | 187 | 118 | 279 | 5.77e-12 | 64.3 |
| MsG0380015521.01.T01 | MTR_1g053025 | 30.814 | 172 | 101 | 4 | 26 | 187 | 132 | 295 | 1.05e-11 | 63.5 |
| MsG0380015521.01.T01 | MTR_3g108560 | 33.146 | 178 | 99 | 7 | 24 | 192 | 132 | 298 | 2.66e-11 | 62.0 |
| MsG0380015521.01.T01 | MTR_4g098590 | 31.844 | 179 | 100 | 8 | 23 | 192 | 127 | 292 | 3.68e-11 | 62.0 |
| MsG0380015521.01.T01 | MTR_6g022520 | 29.348 | 184 | 116 | 5 | 16 | 191 | 46 | 223 | 4.00e-11 | 61.6 |
| MsG0380015521.01.T01 | MTR_3g108560 | 33.146 | 178 | 99 | 7 | 24 | 192 | 132 | 298 | 4.02e-11 | 62.0 |
| MsG0380015521.01.T01 | MTR_7g075820 | 29.609 | 179 | 104 | 6 | 23 | 193 | 142 | 306 | 8.72e-11 | 60.8 |
| MsG0380015521.01.T01 | MTR_3g107160 | 31.100 | 209 | 108 | 9 | 2 | 191 | 104 | 295 | 9.50e-11 | 60.8 |
| MsG0380015521.01.T01 | MTR_3g099830 | 33.140 | 172 | 86 | 6 | 27 | 189 | 122 | 273 | 9.97e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 39 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCAACAAACCTTTGAAAT+TGG | 0.194760 | 3:+71367894 | None:intergenic |
| TAATTGAACTTCGACTATTT+TGG | 0.213375 | 3:-71367989 | MsG0380015521.01.T01:CDS |
| GATTTAAAGAAACTTATATC+TGG | 0.269415 | 3:-71368603 | MsG0380015521.01.T01:CDS |
| GTGCAATTTCTAACTATAAC+AGG | 0.308838 | 3:-71368438 | MsG0380015521.01.T01:CDS |
| ATTGGAAGAGTTTGAAGTTT+GGG | 0.309164 | 3:+71367912 | None:intergenic |
| AATTGGAAGAGTTTGAAGTT+TGG | 0.316380 | 3:+71367911 | None:intergenic |
| ATATGAATTGATTTCTTGAT+TGG | 0.321065 | 3:+71368040 | None:intergenic |
| TTTGAAGTTTGGGACAATAA+TGG | 0.327358 | 3:+71367922 | None:intergenic |
| GGCTTTAATCAACTTGGATA+AGG | 0.336578 | 3:+71368503 | None:intergenic |
| AACATCGAATAAACATATAT+TGG | 0.366945 | 3:+71368482 | None:intergenic |
| TTGATTATTGCATTCATGAT+TGG | 0.370257 | 3:-71367965 | MsG0380015521.01.T01:CDS |
| GCTTTAATCAACTTGGATAA+GGG | 0.372624 | 3:+71368504 | None:intergenic |
| ATCTGGGTTTCCCATATTAG+AGG | 0.385025 | 3:-71368586 | MsG0380015521.01.T01:CDS |
| ACATCTGATTGATGTTTGTT+TGG | 0.407425 | 3:-71368637 | MsG0380015521.01.T01:CDS |
| TATGAATTGATTTCTTGATT+GGG | 0.408255 | 3:+71368041 | None:intergenic |
| CACTTTGTATATCGTCACTT+TGG | 0.418915 | 3:-71368781 | MsG0380015521.01.T01:CDS |
| TTTCCAATCTTCAATGCCTC+TGG | 0.425290 | 3:+71367761 | None:intergenic |
| CTACCAGAGGCATTGAAGAT+TGG | 0.433233 | 3:-71367764 | MsG0380015521.01.T01:CDS |
| CATATTAGAGGATTTGAAAA+GGG | 0.456217 | 3:-71368574 | MsG0380015521.01.T01:CDS |
| TATATTGGCTTTAATCAACT+TGG | 0.468415 | 3:+71368497 | None:intergenic |
| AGATGTAACGTTTCAAGTAA+AGG | 0.477823 | 3:+71368654 | None:intergenic |
| CCATATTAGAGGATTTGAAA+AGG | 0.485017 | 3:-71368575 | MsG0380015521.01.T01:CDS |
| TCAAACTCTTCCAATTTCAA+AGG | 0.486683 | 3:-71367904 | MsG0380015521.01.T01:intron |
| ATGAATTGATTTCTTGATTG+GGG | 0.487037 | 3:+71368042 | None:intergenic |
| GAGACATAGTTAAGACAAGT+AGG | 0.495649 | 3:+71368694 | None:intergenic |
| ATTTAAAGAAACTTATATCT+GGG | 0.498285 | 3:-71368602 | MsG0380015521.01.T01:CDS |
| TTTCAAACACAGGATAGCCT+TGG | 0.508640 | 3:+71368015 | None:intergenic |
| TTGCATTCATGATTGGAATG+AGG | 0.567795 | 3:-71367958 | MsG0380015521.01.T01:CDS |
| TGTTTGTTTGGATTATATCG+AGG | 0.574440 | 3:-71368625 | MsG0380015521.01.T01:CDS |
| AAAGGAAGATGAAATGAACA+AGG | 0.601297 | 3:+71368672 | None:intergenic |
| TGCAATTTCTAACTATAACA+GGG | 0.604170 | 3:-71368437 | MsG0380015521.01.T01:CDS |
| TTTATGTTGCAAAACTCTCG+TGG | 0.608787 | 3:-71368733 | MsG0380015521.01.T01:CDS |
| TCAAGTGTAGGAGTTACAGC+TGG | 0.610481 | 3:-71368540 | MsG0380015521.01.T01:CDS |
| GCATATGTCACATCAAGTGT+AGG | 0.611787 | 3:-71368552 | MsG0380015521.01.T01:CDS |
| AGTGTAGGAGTTACAGCTGG+AGG | 0.629166 | 3:-71368537 | MsG0380015521.01.T01:CDS |
| GAAATCAATTCATATTACCA+AGG | 0.645829 | 3:-71368032 | MsG0380015521.01.T01:CDS |
| GTGTAGGAGTTACAGCTGGA+GGG | 0.649098 | 3:-71368536 | MsG0380015521.01.T01:CDS |
| GCAATTTCTAACTATAACAG+GGG | 0.650025 | 3:-71368436 | MsG0380015521.01.T01:intron |
| ACAGGTTCATCTACTACCAG+AGG | 0.713661 | 3:-71367777 | MsG0380015521.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAGAAACTTATATCT+GGG | - | Chr3:71367932-71367951 | MsG0380015521.01.T01:CDS | 15.0% |
| !!! | AAACTATTTTAGATAGTTTA+GGG | - | Chr3:71368220-71368239 | MsG0380015521.01.T01:intron | 15.0% |
| !!! | TAAACTATTTTAGATAGTTT+AGG | - | Chr3:71368219-71368238 | MsG0380015521.01.T01:intron | 15.0% |
| !! | AACATCGAATAAACATATAT+TGG | + | Chr3:71368055-71368074 | None:intergenic | 20.0% |
| !! | GATTTAAAGAAACTTATATC+TGG | - | Chr3:71367931-71367950 | MsG0380015521.01.T01:CDS | 20.0% |
| !! | TTAAAAAACGTTTATGCATA+TGG | + | Chr3:71368202-71368221 | None:intergenic | 20.0% |
| !!! | ATATGAATTGATTTCTTGAT+TGG | + | Chr3:71368497-71368516 | None:intergenic | 20.0% |
| !!! | GAAGAAATTTTATTTATGTC+TGG | - | Chr3:71368331-71368350 | MsG0380015521.01.T01:intron | 20.0% |
| !!! | TATGAATTGATTTCTTGATT+GGG | + | Chr3:71368496-71368515 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGATATGCAGAT+GGG | - | Chr3:71368460-71368479 | MsG0380015521.01.T01:CDS | 20.0% |
| !!! | TTTTTTTTTTGATATGCAGA+TGG | - | Chr3:71368459-71368478 | MsG0380015521.01.T01:CDS | 20.0% |
| ! | ACATAATTAAGTGTCAGAAT+TGG | + | Chr3:71368387-71368406 | None:intergenic | 25.0% |
| ! | CATATTAGAGGATTTGAAAA+GGG | - | Chr3:71367960-71367979 | MsG0380015521.01.T01:CDS | 25.0% |
| ! | GAAATCAATTCATATTACCA+AGG | - | Chr3:71368502-71368521 | MsG0380015521.01.T01:CDS | 25.0% |
| ! | TGCAATTTCTAACTATAACA+GGG | - | Chr3:71368097-71368116 | MsG0380015521.01.T01:intron | 25.0% |
| ! | TTGATTATTGCATTCATGAT+TGG | - | Chr3:71368569-71368588 | MsG0380015521.01.T01:CDS | 25.0% |
| ! | TTGTCAATCAGAGAAAAAAT+AGG | + | Chr3:71368734-71368753 | None:intergenic | 25.0% |
| !! | ATGAATTGATTTCTTGATTG+GGG | + | Chr3:71368495-71368514 | None:intergenic | 25.0% |
| !! | ATTATGTTGTTTATCCATAC+AGG | - | Chr3:71368400-71368419 | MsG0380015521.01.T01:intron | 25.0% |
| !! | CTTTTCAAATCCTCTAATAT+GGG | + | Chr3:71367961-71367980 | None:intergenic | 25.0% |
| !! | TAATTGAACTTCGACTATTT+TGG | - | Chr3:71368545-71368564 | MsG0380015521.01.T01:CDS | 25.0% |
| !! | TCAATTAAGTTTTCAAACAC+AGG | + | Chr3:71368532-71368551 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTCTGATTGACAA+TGG | - | Chr3:71368734-71368753 | MsG0380015521.01.T01:CDS | 25.0% |
| !!! | TATATTGGCTTTAATCAACT+TGG | + | Chr3:71368040-71368059 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGATATGCAGATG+GGG | - | Chr3:71368461-71368480 | MsG0380015521.01.T01:CDS | 25.0% |
| AAAGGAAGATGAAATGAACA+AGG | + | Chr3:71367865-71367884 | None:intergenic | 30.0% | |
| AAGCTAACTCAATGAAAGTA+TGG | + | Chr3:71368288-71368307 | None:intergenic | 30.0% | |
| ACATCTGATTGATGTTTGTT+TGG | - | Chr3:71367897-71367916 | MsG0380015521.01.T01:intron | 30.0% | |
| CCATATTAGAGGATTTGAAA+AGG | - | Chr3:71367959-71367978 | MsG0380015521.01.T01:CDS | 30.0% | |
| GCAATTTCTAACTATAACAG+GGG | - | Chr3:71368098-71368117 | MsG0380015521.01.T01:intron | 30.0% | |
| GCTTTAATCAACTTGGATAA+GGG | + | Chr3:71368033-71368052 | None:intergenic | 30.0% | |
| GTGCAATTTCTAACTATAAC+AGG | - | Chr3:71368096-71368115 | MsG0380015521.01.T01:intron | 30.0% | |
| TCAAACTCTTCCAATTTCAA+AGG | - | Chr3:71368630-71368649 | MsG0380015521.01.T01:CDS | 30.0% | |
| TGTTTGTTTGGATTATATCG+AGG | - | Chr3:71367909-71367928 | MsG0380015521.01.T01:CDS | 30.0% | |
| TTCCAATTTCAAAGGTTTGT+TGG | - | Chr3:71368638-71368657 | MsG0380015521.01.T01:CDS | 30.0% | |
| ! | AATTGGAAGAGTTTGAAGTT+TGG | + | Chr3:71368626-71368645 | None:intergenic | 30.0% |
| ! | AGATGTAACGTTTCAAGTAA+AGG | + | Chr3:71367883-71367902 | None:intergenic | 30.0% |
| ! | ATTGGAAGAGTTTGAAGTTT+GGG | + | Chr3:71368625-71368644 | None:intergenic | 30.0% |
| ! | CCTTTTCAAATCCTCTAATA+TGG | + | Chr3:71367962-71367981 | None:intergenic | 30.0% |
| ! | GAGAGTTTTGCAACATAAAA+TGG | + | Chr3:71367800-71367819 | None:intergenic | 30.0% |
| ! | TTTGAAGTTTGGGACAATAA+TGG | + | Chr3:71368615-71368634 | None:intergenic | 30.0% |
| CAAAAGTCATAGAACCTGTA+TGG | + | Chr3:71368417-71368436 | None:intergenic | 35.0% | |
| CACTTTGTATATCGTCACTT+TGG | - | Chr3:71367753-71367772 | MsG0380015521.01.T01:CDS | 35.0% | |
| GAGACATAGTTAAGACAAGT+AGG | + | Chr3:71367843-71367862 | None:intergenic | 35.0% | |
| TCACGTCGATGAATAGTTAT+TGG | - | Chr3:71368661-71368680 | MsG0380015521.01.T01:CDS | 35.0% | |
| TTGCATTCATGATTGGAATG+AGG | - | Chr3:71368576-71368595 | MsG0380015521.01.T01:CDS | 35.0% | |
| TTTATGTTGCAAAACTCTCG+TGG | - | Chr3:71367801-71367820 | MsG0380015521.01.T01:intron | 35.0% | |
| ! | CAGGTTCTATGACTTTTGTT+TGG | - | Chr3:71368419-71368438 | MsG0380015521.01.T01:intron | 35.0% |
| ! | GGCTTTAATCAACTTGGATA+AGG | + | Chr3:71368034-71368053 | None:intergenic | 35.0% |
| !! | GACCAACAAACCTTTGAAAT+TGG | + | Chr3:71368643-71368662 | None:intergenic | 35.0% |
| ATCTGGGTTTCCCATATTAG+AGG | - | Chr3:71367948-71367967 | MsG0380015521.01.T01:CDS | 40.0% | |
| GCATATGTCACATCAAGTGT+AGG | - | Chr3:71367982-71368001 | MsG0380015521.01.T01:CDS | 40.0% | |
| TTCTCTGATTGACAATGGAC+AGG | - | Chr3:71368739-71368758 | MsG0380015521.01.T01:CDS | 40.0% | |
| TTTCAAACACAGGATAGCCT+TGG | + | Chr3:71368522-71368541 | None:intergenic | 40.0% | |
| TTTCCAATCTTCAATGCCTC+TGG | + | Chr3:71368776-71368795 | None:intergenic | 40.0% | |
| ACAGGTTCATCTACTACCAG+AGG | - | Chr3:71368757-71368776 | MsG0380015521.01.T01:CDS | 45.0% | |
| TCAAGTGTAGGAGTTACAGC+TGG | - | Chr3:71367994-71368013 | MsG0380015521.01.T01:CDS | 45.0% | |
| !! | CTACCAGAGGCATTGAAGAT+TGG | - | Chr3:71368770-71368789 | MsG0380015521.01.T01:CDS | 45.0% |
| AGTGTAGGAGTTACAGCTGG+AGG | - | Chr3:71367997-71368016 | MsG0380015521.01.T01:CDS | 50.0% | |
| GTGTAGGAGTTACAGCTGGA+GGG | - | Chr3:71367998-71368017 | MsG0380015521.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 71367721 | 71368835 | 71367721 | ID=MsG0380015521.01;Name=MsG0380015521.01 |
| Chr3 | mRNA | 71367721 | 71368835 | 71367721 | ID=MsG0380015521.01.T01;Parent=MsG0380015521.01;Name=MsG0380015521.01.T01;_AED=0.19;_eAED=0.29;_QI=0|0|0|1|1|1|3|0|215 |
| Chr3 | exon | 71368437 | 71368835 | 71368437 | ID=MsG0380015521.01.T01:exon:23794;Parent=MsG0380015521.01.T01 |
| Chr3 | exon | 71367905 | 71368078 | 71367905 | ID=MsG0380015521.01.T01:exon:23793;Parent=MsG0380015521.01.T01 |
| Chr3 | exon | 71367721 | 71367795 | 71367721 | ID=MsG0380015521.01.T01:exon:23792;Parent=MsG0380015521.01.T01 |
| Chr3 | CDS | 71368437 | 71368835 | 71368437 | ID=MsG0380015521.01.T01:cds;Parent=MsG0380015521.01.T01 |
| Chr3 | CDS | 71367905 | 71368078 | 71367905 | ID=MsG0380015521.01.T01:cds;Parent=MsG0380015521.01.T01 |
| Chr3 | CDS | 71367721 | 71367795 | 71367721 | ID=MsG0380015521.01.T01:cds;Parent=MsG0380015521.01.T01 |
| Gene Sequence |
| Protein sequence |
