AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015550.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015550.01.T01 MTR_3g072380 70.998 431 32 6 1 429 1 340 0.0 564
MsG0380015550.01.T01 MTR_1g030320 63.869 429 63 8 3 428 2 341 1.77e-178 501
MsG0380015550.01.T01 MTR_3g072380 85.520 221 5 1 1 221 1 194 7.17e-129 372
MsG0380015550.01.T01 MTR_4g018760 26.702 382 193 5 15 396 13 307 2.49e-38 141
MsG0380015550.01.T01 MTR_3g462070 28.382 377 179 6 22 396 17 304 7.37e-38 139
MsG0380015550.01.T01 MTR_3g070000 26.053 380 190 8 19 396 29 319 1.44e-31 123
MsG0380015550.01.T01 MTR_8g090130 25.995 377 188 5 22 396 19 306 3.22e-31 122
MsG0380015550.01.T01 MTR_4g101860 24.289 387 200 9 12 395 50 346 6.78e-25 105
MsG0380015550.01.T01 MTR_5g081710 28.077 260 147 6 1 254 1 226 1.25e-24 103
MsG0380015550.01.T01 MTR_5g081710 35.043 117 76 0 280 396 187 303 8.57e-11 63.2
MsG0380015550.01.T01 MTR_2g070400 24.242 396 223 11 38 422 4 333 9.06e-17 81.3
MsG0380015550.01.T01 MTR_7g110380 22.928 362 213 5 68 428 43 339 8.89e-16 79.0
MsG0380015550.01.T01 MTR_4g114360 19.807 414 239 8 12 424 11 332 3.06e-15 77.0
MsG0380015550.01.T01 MTR_2g022700 34.746 118 77 0 106 223 164 281 3.12e-15 77.4
MsG0380015550.01.T01 MTR_3g077640 25.513 341 172 12 71 400 137 406 3.96e-15 77.0
MsG0380015550.01.T01 MTR_3g049400 35.345 116 75 0 108 223 172 287 1.00e-14 75.9
MsG0380015550.01.T01 MTR_6g005480 31.847 157 103 3 69 223 138 292 3.74e-14 74.3
MsG0380015550.01.T01 MTR_4g131800 33.621 116 77 0 108 223 163 278 7.17e-14 74.3
MsG0380015550.01.T01 MTR_4g105630 30.612 147 92 3 69 211 110 250 2.93e-11 65.1
MsG0380015550.01.T01 MTR_4g105630 35.644 101 65 0 111 211 150 250 3.34e-11 65.1
MsG0380015550.01.T01 MTR_4g105630 30.612 147 92 3 69 211 110 250 3.37e-11 65.1
MsG0380015550.01.T01 MTR_4g105630 35.644 101 65 0 111 211 150 250 3.65e-11 64.7
MsG0380015550.01.T01 MTR_2g038410 27.429 175 117 4 38 206 48 218 5.58e-11 64.3
MsG0380015550.01.T01 MTR_5g044220 29.008 131 90 1 113 240 171 301 9.32e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015550.01.T01 AT1G21870 62.645 431 67 6 1 428 1 340 1.82e-177 499
MsG0380015550.01.T01 AT1G77610 63.721 430 59 9 1 428 1 335 1.61e-172 486
MsG0380015550.01.T01 AT5G05820 27.225 382 183 9 19 396 15 305 1.22e-35 134
MsG0380015550.01.T01 AT3G11320 26.702 382 185 9 19 396 15 305 3.54e-34 130
MsG0380015550.01.T01 AT1G12500 28.133 391 181 10 19 401 63 361 1.52e-33 129
MsG0380015550.01.T01 AT5G04160 30.732 205 113 2 19 221 16 193 1.18e-23 100
MsG0380015550.01.T01 AT5G04160 34.167 120 73 2 280 396 190 306 5.63e-12 67.0
MsG0380015550.01.T01 AT3G10290 29.756 205 115 2 19 221 62 239 4.72e-22 97.1
MsG0380015550.01.T01 AT3G10290 33.333 120 74 2 280 396 236 352 5.53e-11 64.3
MsG0380015550.01.T01 AT3G17430 24.225 355 199 7 68 417 40 329 2.13e-17 84.0
MsG0380015550.01.T01 AT3G17430 24.225 355 199 7 68 417 40 329 2.13e-17 84.0
MsG0380015550.01.T01 AT3G14410 24.798 371 198 10 65 427 40 337 2.03e-16 80.5
MsG0380015550.01.T01 AT5G54800 34.746 118 77 0 106 223 157 274 3.49e-15 77.4
MsG0380015550.01.T01 AT1G48230 23.622 381 205 9 68 427 40 355 1.05e-13 72.8
MsG0380015550.01.T01 AT2G30460 23.377 308 169 7 120 424 63 306 2.07e-13 71.2
MsG0380015550.01.T01 AT2G30460 23.377 308 169 7 120 424 63 306 2.07e-13 71.2
MsG0380015550.01.T01 AT2G30460 23.377 308 169 7 120 424 63 306 2.07e-13 71.2
MsG0380015550.01.T01 AT1G61800 32.759 116 78 0 108 223 159 274 4.22e-13 70.9
MsG0380015550.01.T01 AT1G61800 32.759 116 78 0 108 223 159 274 5.32e-13 70.9
MsG0380015550.01.T01 AT3G01550 31.034 145 98 2 69 213 104 246 3.50e-12 68.2
MsG0380015550.01.T01 AT5G57100 28.387 155 104 2 55 206 77 227 4.66e-11 63.5
MsG0380015550.01.T01 AT5G57100 28.387 155 104 2 55 206 77 227 8.43e-11 63.9
MsG0380015550.01.T01 AT5G57100 28.387 155 104 2 55 206 77 227 9.51e-11 63.2

Find 105 sgRNAs with CRISPR-Local

Find 564 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCAAAATCCACAATAAA+AGG 0.162704 3:+71724078 MsG0380015550.01.T01:five_prime_UTR
TTGTTTCTTGGCTGATATTT+AGG 0.172542 3:+71730440 MsG0380015550.01.T01:CDS
CAGTTGCTGTCCTTGTTTCT+TGG 0.199982 3:+71730428 MsG0380015550.01.T01:CDS
GAAGAAAGAGTAGTTATAAA+AGG 0.212455 3:-71724177 None:intergenic
AATTGGCTTAGTTACATATA+TGG 0.219642 3:+71730641 MsG0380015550.01.T01:exon
ATTAGAAAATAAGTTCTAAT+TGG 0.263017 3:+71730624 MsG0380015550.01.T01:exon
CTTGTGGGTTGTACATTCTA+TGG 0.283551 3:+71730505 MsG0380015550.01.T01:CDS
CTTCTCTTATACCCATTGTT+GGG 0.300758 3:+71726613 MsG0380015550.01.T01:CDS
TGGAGCATATATAGTAATTA+AGG 0.308491 3:+71726287 MsG0380015550.01.T01:CDS
GAGATGAGCTTTAATATGTT+TGG 0.318183 3:+71726660 MsG0380015550.01.T01:CDS
ATTGGCTTAGTTACATATAT+GGG 0.326406 3:+71730642 MsG0380015550.01.T01:exon
CGAGGGGTCCGAGGAGTTCC+TGG 0.326816 3:-71730565 None:intergenic
ATTGTCTGCATAAAAGAAAC+TGG 0.334946 3:-71726429 None:intergenic
CAATCGTACAAATATAGTTT+TGG 0.337773 3:+71730926 MsG0380015550.01.T01:three_prime_UTR
GCTGTAACATTTAACGTTGC+TGG 0.348474 3:+71730115 MsG0380015550.01.T01:CDS
ATGAGAGCCGACCAAGGATA+TGG 0.352270 3:-71730019 None:intergenic
GCTTCTCTTATACCCATTGT+TGG 0.360259 3:+71726612 MsG0380015550.01.T01:CDS
TCCTGGAACTGGTGGTTGTT+GGG 0.360715 3:-71730548 None:intergenic
ACAGCATTTAAATATGAGAT+TGG 0.361357 3:-71730466 None:intergenic
CGTTAACAAGTGGATCTTCC+AGG 0.363174 3:+71724314 MsG0380015550.01.T01:CDS
CACTTTATCTGCTCAGCCAT+TGG 0.366007 3:+71726267 MsG0380015550.01.T01:CDS
CTAGACAAGAAAATTGAAAA+AGG 0.366143 3:-71730775 None:intergenic
GTGGATTGTGGAAGTTATAA+AGG 0.368179 3:-71726092 None:intergenic
TTCCTGGAACTGGTGGTTGT+TGG 0.369159 3:-71730549 None:intergenic
TGAAAGGCAGTTATAACTAT+AGG 0.373405 3:+71730680 MsG0380015550.01.T01:three_prime_UTR
TGCGGCCTTACTTGGCTGTT+TGG 0.374934 3:+71726689 MsG0380015550.01.T01:CDS
CCTTCGTATTTCTTCTTCAA+TGG 0.377645 3:+71724203 MsG0380015550.01.T01:exon
CTCTCTTGTGTATTCTTCAA+TGG 0.386936 3:+71724265 MsG0380015550.01.T01:CDS
TGAACCTTACCGGTGGTTGC+AGG 0.387718 3:-71726465 None:intergenic
CATAAACACGGTTTATTACA+TGG 0.390132 3:+71729916 MsG0380015550.01.T01:CDS
TCCCAACAACCACCAGTTCC+AGG 0.397433 3:+71730547 MsG0380015550.01.T01:CDS
AAGAAAGAGTAGTTATAAAA+GGG 0.397867 3:-71724176 None:intergenic
ATCGCAAATCAGTACCTTGC+AGG 0.402620 3:+71727090 MsG0380015550.01.T01:CDS
ATAGGTATATGAAAGTGATT+TGG 0.404189 3:+71730698 MsG0380015550.01.T01:three_prime_UTR
AGTGGACACATGATACTGAT+AGG 0.407310 3:-71726248 None:intergenic
GTCCGAGGAGTTCCTGGAAC+TGG 0.411031 3:-71730559 None:intergenic
CTACTAGACAAATTACTGTT+AGG 0.419362 3:-71730883 None:intergenic
CAGCATTTAAATATGAGATT+GGG 0.422316 3:-71730465 None:intergenic
TAACGTTGCTGGGAACCTTA+AGG 0.422563 3:+71730126 MsG0380015550.01.T01:CDS
ATCTCATATTTAAATGCTGT+TGG 0.434631 3:+71730469 MsG0380015550.01.T01:CDS
CTCCCTGCCATGTTACTTGA+AGG 0.451026 3:+71729965 MsG0380015550.01.T01:CDS
CACAAAAGTGGCTTGCGAAT+GGG 0.454016 3:+71727169 MsG0380015550.01.T01:CDS
TGATTTGCGATAACATTAGC+TGG 0.458473 3:-71727078 None:intergenic
AAGGCAATGGAGTTCTTGAA+TGG 0.459783 3:+71729984 MsG0380015550.01.T01:CDS
GGATGTGCCATCACTCTTGT+GGG 0.463559 3:+71730490 MsG0380015550.01.T01:CDS
CTGTAACATTTAACGTTGCT+GGG 0.466155 3:+71730116 MsG0380015550.01.T01:CDS
TTCTCTTATACCCATTGTTG+GGG 0.482452 3:+71726614 MsG0380015550.01.T01:CDS
TGCATGGATACAAATTTGAC+AGG 0.483890 3:+71726748 MsG0380015550.01.T01:CDS
AGTTATAACTGCCTTTCAAA+TGG 0.484072 3:-71730675 None:intergenic
CTCTTATACCCATTGTTGGG+GGG 0.488226 3:+71726616 MsG0380015550.01.T01:CDS
AACTTTACCTCTCACAAAAG+TGG 0.491771 3:+71727157 MsG0380015550.01.T01:CDS
TGGATGTGCCATCACTCTTG+TGG 0.493073 3:+71730489 MsG0380015550.01.T01:CDS
ACCTTATGCGACCATGATCT+TGG 0.497027 3:+71729940 MsG0380015550.01.T01:CDS
ACCAAGATCATGGTCGCATA+AGG 0.498204 3:-71729941 None:intergenic
TTAATACTCATCCATATCCT+TGG 0.501248 3:+71730008 MsG0380015550.01.T01:CDS
GTTCTGCATTAACATAGTGC+TGG 0.501769 3:+71726383 MsG0380015550.01.T01:CDS
TCGGACCCCTCGGAGTAAGA+TGG 0.510607 3:+71730576 MsG0380015550.01.T01:CDS
GAGATCTGATTACGCTCCAT+TGG 0.511266 3:-71724245 None:intergenic
AACCAAAATCCACAATAAAA+GGG 0.512921 3:+71724079 MsG0380015550.01.T01:five_prime_UTR
TAGCACATTAGTAATTGTAC+TGG 0.513357 3:-71731000 None:intergenic
GTGGACACATGATACTGATA+GGG 0.518687 3:-71726247 None:intergenic
TCACAAAAGTGGCTTGCGAA+TGG 0.519620 3:+71727168 MsG0380015550.01.T01:CDS
TGTAGCCAAACAGCCAAGTA+AGG 0.519706 3:-71726694 None:intergenic
CTGTTGACCCTGAAGATCGC+TGG 0.528072 3:+71726334 MsG0380015550.01.T01:CDS
GGCAGGGAGCACCAAGATCA+TGG 0.529268 3:-71729951 None:intergenic
TCTTGTGTATTCTTCAATGG+TGG 0.529500 3:+71724268 MsG0380015550.01.T01:CDS
CAGGAACTCCTCGGACCCCT+CGG 0.529703 3:+71730566 MsG0380015550.01.T01:CDS
TTGCCTTCAAGTAACATGGC+AGG 0.534660 3:-71729968 None:intergenic
TTAAATACCAATGTGGATTG+TGG 0.534716 3:-71726104 None:intergenic
AATTACTATATATGCTCCAA+TGG 0.545994 3:-71726283 None:intergenic
ATCTTACTCCGAGGGGTCCG+AGG 0.547102 3:-71730574 None:intergenic
TTCTGCATTAACATAGTGCT+GGG 0.548461 3:+71726384 MsG0380015550.01.T01:CDS
CAATGGCTGAGCAGATAAAG+TGG 0.552939 3:-71726266 None:intergenic
TCTCTTATACCCATTGTTGG+GGG 0.557262 3:+71726615 MsG0380015550.01.T01:CDS
ATTTGATTGTTATGCCTGCA+AGG 0.559104 3:-71727104 None:intergenic
GTTAAATGTTACAGCAGTAG+TGG 0.561669 3:-71730107 None:intergenic
CCACTTGTTAACGATGATAA+CGG 0.564606 3:-71724304 None:intergenic
TACTCATCCATATCCTTGGT+CGG 0.568792 3:+71730012 MsG0380015550.01.T01:CDS
GGTTTCTTCTGCCATTTGAA+AGG 0.568917 3:+71730664 MsG0380015550.01.T01:three_prime_UTR
CCGTTATCATCGTTAACAAG+TGG 0.571211 3:+71724304 MsG0380015550.01.T01:CDS
CACCAGTTCCAGGAACTCCT+CGG 0.575486 3:+71730557 MsG0380015550.01.T01:CDS
CGAGGAGTTCCTGGAACTGG+TGG 0.584220 3:-71730556 None:intergenic
TGCCTTCAAGTAACATGGCA+GGG 0.584848 3:-71729967 None:intergenic
TTGGCTTAGTTACATATATG+GGG 0.594202 3:+71730643 MsG0380015550.01.T01:three_prime_UTR
GCGACTCCATCTTACTCCGA+GGG 0.596641 3:-71730582 None:intergenic
AACTTAACAATCAACGCCCG+TGG 0.596746 3:-71730821 None:intergenic
ATAACTTCCACAATCCACAT+TGG 0.599532 3:+71726097 MsG0380015550.01.T01:CDS
TCCATTGCCTTCAAGTAACA+TGG 0.603049 3:-71729972 None:intergenic
ATGTTACAGCAGTAGTGGAG+TGG 0.611069 3:-71730102 None:intergenic
TCATTCACACCTGCAACCAC+CGG 0.612110 3:+71726456 MsG0380015550.01.T01:CDS
TCAGGGTCAACAGTTATCAG+TGG 0.612864 3:-71726324 None:intergenic
TGTACAACCCACAAGAGTGA+TGG 0.617011 3:-71730497 None:intergenic
TCTAATTTATCATTTACAAG+TGG 0.619629 3:-71730607 None:intergenic
TAAATATCAGCCAAGAAACA+AGG 0.621563 3:-71730438 None:intergenic
TGTTATCTTTAGCATAAACA+CGG 0.629294 3:+71729904 MsG0380015550.01.T01:CDS
GCCATGTTACTTGAAGGCAA+TGG 0.641369 3:+71729971 MsG0380015550.01.T01:CDS
CATGCAAAAGAGATTCTGCA+AGG 0.649521 3:-71726731 None:intergenic
ATGCAGAACACAAATGACAT+CGG 0.665514 3:-71726369 None:intergenic
AGCGACTCCATCTTACTCCG+AGG 0.670016 3:-71730583 None:intergenic
TGGACACATGATACTGATAG+GGG 0.672246 3:-71726246 None:intergenic
ATAATGATGAGAGCCGACCA+AGG 0.678882 3:-71730025 None:intergenic
ACTTAACAATCAACGCCCGT+GGG 0.690711 3:-71730820 None:intergenic
CGACTCCATCTTACTCCGAG+GGG 0.710097 3:-71730581 None:intergenic
CCATTGAAGAAGAAATACGA+AGG 0.710639 3:-71724203 None:intergenic
TCTGCATTAACATAGTGCTG+GGG 0.737412 3:+71726385 MsG0380015550.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTAAAATGAATTAAAAA+TGG + Chr3:71725684-71725703 MsG0380015550.01.T01:intron 10.0%
!! TATCCAATAATATTTAATAA+TGG + Chr3:71729073-71729092 MsG0380015550.01.T01:intron 10.0%
!!! TATTTTCAATAAATAAATAG+GGG - Chr3:71728080-71728099 None:intergenic 10.0%
!! ACGAATATATTTAATATAGA+AGG + Chr3:71727202-71727221 MsG0380015550.01.T01:intron 15.0%
!! ATACTGAAAAATATAGTTAT+TGG - Chr3:71730178-71730197 None:intergenic 15.0%
!! CTAAAATTCAATGAATTTAA+AGG - Chr3:71724703-71724722 None:intergenic 15.0%
!! GCTTAAAAAAATAGAATAAA+TGG - Chr3:71725099-71725118 None:intergenic 15.0%
!! GTAAATTTAGTAAAAAAGAA+TGG - Chr3:71724352-71724371 None:intergenic 15.0%
!! TAAAAGATGAAAGAAATATT+CGG - Chr3:71729724-71729743 None:intergenic 15.0%
!!! ACATTTTGTATTTTTCTTTT+TGG + Chr3:71729593-71729612 MsG0380015550.01.T01:intron 15.0%
!!! ATTAGAAAATAAGTTCTAAT+TGG + Chr3:71730624-71730643 MsG0380015550.01.T01:exon 15.0%
!!! ATTGATTTTAAATCAATCTT+GGG + Chr3:71725414-71725433 MsG0380015550.01.T01:intron 15.0%
!!! TATTTGTTAATTGCTATTTT+TGG + Chr3:71724672-71724691 MsG0380015550.01.T01:intron 15.0%
!!! TCTATAAACAAAAAATTTTG+AGG + Chr3:71725990-71726009 MsG0380015550.01.T01:intron 15.0%
!! AAAAGATGAAAGAAATATTC+GGG - Chr3:71729723-71729742 None:intergenic 20.0%
!! AAGAAAGAGTAGTTATAAAA+GGG - Chr3:71724179-71724198 None:intergenic 20.0%
!! AAGAAGGGAATTATATTTAA+AGG + Chr3:71725944-71725963 MsG0380015550.01.T01:intron 20.0%
!! ATTATTGAATGTTATTGTTG+AGG + Chr3:71730308-71730327 MsG0380015550.01.T01:intron 20.0%
!! GGTCCATTATTAAATATTAT+TGG - Chr3:71729079-71729098 None:intergenic 20.0%
!! TATTAATTTCTGAACAAGTA+TGG + Chr3:71725727-71725746 MsG0380015550.01.T01:intron 20.0%
!! TCTAATTTATCATTTACAAG+TGG - Chr3:71730610-71730629 None:intergenic 20.0%
!! TGTTTAATTAGTAATCTTCA+GGG + Chr3:71728835-71728854 MsG0380015550.01.T01:intron 20.0%
!! TTTAAAGGATTCTTTAATGA+TGG + Chr3:71725959-71725978 MsG0380015550.01.T01:intron 20.0%
!!! AACACATTGAATAATTTTGA+AGG - Chr3:71728002-71728021 None:intergenic 20.0%
!!! ATGTTTTTCTAATTAAAACC+AGG + Chr3:71729317-71729336 MsG0380015550.01.T01:intron 20.0%
!!! GAAATGTATCATTTTTCTTA+TGG + Chr3:71725772-71725791 MsG0380015550.01.T01:intron 20.0%
!!! GATTGATTTTAAATCAATCT+TGG + Chr3:71725413-71725432 MsG0380015550.01.T01:intron 20.0%
!!! GTTTTTTTCTTAGCATATTT+TGG - Chr3:71725468-71725487 None:intergenic 20.0%
!!! TCATCATTATTTTTAGTTCT+GGG + Chr3:71730038-71730057 MsG0380015550.01.T01:CDS 20.0%
!!! TTCAGAAATTTTTACTTTCT+TGG + Chr3:71727869-71727888 MsG0380015550.01.T01:intron 20.0%
!!! TTGATTTAAAATCAATCATC+TGG - Chr3:71725410-71725429 None:intergenic 20.0%
!!! TTTTTTTTTGGAGAAAAGAA+GGG + Chr3:71725929-71725948 MsG0380015550.01.T01:intron 20.0%
!!! TTTTTTTTTTGGAGAAAAGA+AGG + Chr3:71725928-71725947 MsG0380015550.01.T01:intron 20.0%
! AAACCAAAATCCACAATAAA+AGG + Chr3:71724078-71724097 MsG0380015550.01.T01:five_prime_UTR 25.0%
! AACCAAAATCCACAATAAAA+GGG + Chr3:71724079-71724098 MsG0380015550.01.T01:five_prime_UTR 25.0%
! AAGTAATCGAAAAAATGTCT+AGG - Chr3:71729756-71729775 None:intergenic 25.0%
! AATACTGACACAAAAATAAC+AGG - Chr3:71726891-71726910 None:intergenic 25.0%
! AATTACTATATATGCTCCAA+TGG - Chr3:71726286-71726305 None:intergenic 25.0%
! ACAAGAAAATTGAAAAAGGA+GGG - Chr3:71730774-71730793 None:intergenic 25.0%
! ACAGCATTTAAATATGAGAT+TGG - Chr3:71730469-71730488 None:intergenic 25.0%
! ACTATTATTGCATTTCATTG+TGG - Chr3:71729508-71729527 None:intergenic 25.0%
! AGATAAATGCAAGGAATAAA+AGG - Chr3:71729786-71729805 None:intergenic 25.0%
! ATAGGTATATGAAAGTGATT+TGG + Chr3:71730698-71730717 MsG0380015550.01.T01:three_prime_UTR 25.0%
! ATCTCATATTTAAATGCTGT+TGG + Chr3:71730469-71730488 MsG0380015550.01.T01:CDS 25.0%
! CAGCATTTAAATATGAGATT+GGG - Chr3:71730468-71730487 None:intergenic 25.0%
! CATAAATGAAAGAATGAGTA+TGG - Chr3:71727626-71727645 None:intergenic 25.0%
! CTAAAGTTTGAATATAAAGC+CGG - Chr3:71726508-71726527 None:intergenic 25.0%
! CTAGACAAGAAAATTGAAAA+AGG - Chr3:71730778-71730797 None:intergenic 25.0%
! GAAAGTAAAAATTTCTGAAC+AGG - Chr3:71727868-71727887 None:intergenic 25.0%
! GAAGAAAGAGTAGTTATAAA+AGG - Chr3:71724180-71724199 None:intergenic 25.0%
! GTGTTTAATTAGTAATCTTC+AGG + Chr3:71728834-71728853 MsG0380015550.01.T01:intron 25.0%
! TACTATGATCAATGATGATT+GGG - Chr3:71726153-71726172 None:intergenic 25.0%
! TAGTTATAGCATTAAATCGA+TGG + Chr3:71731035-71731054 MsG0380015550.01.T01:three_prime_UTR 25.0%
! TCAATAAATAAATAGGGGAT+TGG - Chr3:71728075-71728094 None:intergenic 25.0%
! TCTTGTGATTATAATCATCT+AGG - Chr3:71726017-71726036 None:intergenic 25.0%
! TGAACTTATTGCAAAATACT+TGG + Chr3:71729452-71729471 MsG0380015550.01.T01:intron 25.0%
! TGGAGCATATATAGTAATTA+AGG + Chr3:71726287-71726306 MsG0380015550.01.T01:CDS 25.0%
! TGTTATCTTTAGCATAAACA+CGG + Chr3:71729904-71729923 MsG0380015550.01.T01:CDS 25.0%
! TTACTATGATCAATGATGAT+TGG - Chr3:71726154-71726173 None:intergenic 25.0%
! TTATTGGGTCAACAATAAAA+AGG + Chr3:71727288-71727307 MsG0380015550.01.T01:intron 25.0%
! TTCTCTACATCAATATCTTT+AGG - Chr3:71728976-71728995 None:intergenic 25.0%
! TTGGTATTCTTTGTATCTTT+CGG - Chr3:71728183-71728202 None:intergenic 25.0%
! TTTATTGTTGACCCAATAAT+TGG - Chr3:71727287-71727306 None:intergenic 25.0%
! TTTGTACTCTATAAATGTGT+TGG + Chr3:71729822-71729841 MsG0380015550.01.T01:intron 25.0%
!! AAAAATGATTTCAGGTGAAT+TGG + Chr3:71724758-71724777 MsG0380015550.01.T01:intron 25.0%
!! AAATATTTTATGAGGAGCTT+AGG + Chr3:71727464-71727483 MsG0380015550.01.T01:intron 25.0%
!! AACCCTGTATTCAAATTTTT+GGG - Chr3:71730734-71730753 None:intergenic 25.0%
!! AAGATAAAGTGATTTGTCTT+TGG + Chr3:71724854-71724873 MsG0380015550.01.T01:intron 25.0%
!! AATTGAATTTAGAGTTAGGT+TGG - Chr3:71728321-71728340 None:intergenic 25.0%
!! AATTGGCTTAGTTACATATA+TGG + Chr3:71730641-71730660 MsG0380015550.01.T01:exon 25.0%
!! AGAATATTTTCATCTGATCT+TGG + Chr3:71726526-71726545 MsG0380015550.01.T01:intron 25.0%
!! AGAATTGATTCAAACTTGTT+TGG - Chr3:71725008-71725027 None:intergenic 25.0%
!! AGGAATTTTAAATACCAATG+TGG - Chr3:71726114-71726133 None:intergenic 25.0%
!! ATTGAATTTAGAGTTAGGTT+GGG - Chr3:71728320-71728339 None:intergenic 25.0%
!! ATTGGCTTAGTTACATATAT+GGG + Chr3:71730642-71730661 MsG0380015550.01.T01:exon 25.0%
!! CAATCGTACAAATATAGTTT+TGG + Chr3:71730926-71730945 MsG0380015550.01.T01:three_prime_UTR 25.0%
!! CTTGAATTGAATTTAGAGTT+AGG - Chr3:71728325-71728344 None:intergenic 25.0%
!! GAATTAAAAATGGTCTTGAT+AGG + Chr3:71725694-71725713 MsG0380015550.01.T01:intron 25.0%
!! GTTTTTCTACTATGTATGTT+TGG + Chr3:71724722-71724741 MsG0380015550.01.T01:intron 25.0%
!! TAATATGTTTGGATTTTGTG+CGG + Chr3:71726671-71726690 MsG0380015550.01.T01:CDS 25.0%
!! TGGGAAGAAAATATTTTATG+AGG + Chr3:71727456-71727475 MsG0380015550.01.T01:intron 25.0%
!! TGTTTTCTATTTGCAGAAAT+TGG + Chr3:71726212-71726231 MsG0380015550.01.T01:CDS 25.0%
!! TTCATTTTATAGCGAAGAAA+AGG + Chr3:71726061-71726080 MsG0380015550.01.T01:intron 25.0%
!! TTTTAACATTCAAATACTCC+TGG + Chr3:71730197-71730216 MsG0380015550.01.T01:intron 25.0%
!! TTTTTGTAATTGCAATGAGT+TGG + Chr3:71730850-71730869 MsG0380015550.01.T01:three_prime_UTR 25.0%
!!! AAGACCTTTTTAAGATACAT+TGG - Chr3:71725812-71725831 None:intergenic 25.0%
!!! AATATTTAATAATGGACCAC+TGG + Chr3:71729081-71729100 MsG0380015550.01.T01:intron 25.0%
!!! AATCATCTAATTTTTAGCCA+TGG - Chr3:71728357-71728376 None:intergenic 25.0%
!!! AGACCTTTTTAAGATACATT+GGG - Chr3:71725811-71725830 None:intergenic 25.0%
!!! ATCATTTTTCTTATGGAGAT+TGG + Chr3:71725779-71725798 MsG0380015550.01.T01:intron 25.0%
!!! CATCATTATTTTTAGTTCTG+GGG + Chr3:71730039-71730058 MsG0380015550.01.T01:CDS 25.0%
!!! CTCATCATTATTTTTAGTTC+TGG + Chr3:71730037-71730056 MsG0380015550.01.T01:CDS 25.0%
!!! CTTATTTATTTTCATACGTG+TGG + Chr3:71730969-71730988 MsG0380015550.01.T01:three_prime_UTR 25.0%
!!! TAAAAAGGTCTTTGTTTTGA+TGG + Chr3:71725820-71725839 MsG0380015550.01.T01:intron 25.0%
!!! TGCACAAAATCTTTTGTTTT+TGG + Chr3:71725071-71725090 MsG0380015550.01.T01:intron 25.0%
!!! TTTGTTTTGATGGTCAAAAA+AGG + Chr3:71725830-71725849 MsG0380015550.01.T01:intron 25.0%
AAAAGGATTCTCCTTCAAAT+TGG + Chr3:71728650-71728669 MsG0380015550.01.T01:intron 30.0%
AAAATCTAGACATGTGAAGA+AGG - Chr3:71727668-71727687 None:intergenic 30.0%
AAACTATCAAACCCATTGAA+TGG + Chr3:71729405-71729424 MsG0380015550.01.T01:intron 30.0%
AAAGCCTATTGTCCATTATA+AGG - Chr3:71726937-71726956 None:intergenic 30.0%
AAATCCGAGAAAATTGATAC+TGG - Chr3:71725327-71725346 None:intergenic 30.0%
AAATCTAGACATGTGAAGAA+GGG - Chr3:71727667-71727686 None:intergenic 30.0%
AACCTGTACAAAAAACATGA+TGG - Chr3:71730407-71730426 None:intergenic 30.0%
AATCCGAGAAAATTGATACT+GGG - Chr3:71725326-71725345 None:intergenic 30.0%
AATTGCACTAACCATTTCAA+GGG + Chr3:71728898-71728917 MsG0380015550.01.T01:intron 30.0%
AATTTACATTCACTATGCAG+AGG - Chr3:71729169-71729188 None:intergenic 30.0%
ACACAAAAATAACAGGTATG+TGG - Chr3:71726884-71726903 None:intergenic 30.0%
ACTATGTATGTTTGGTTATG+CGG + Chr3:71724730-71724749 MsG0380015550.01.T01:intron 30.0%
AGTTATAACTGCCTTTCAAA+TGG - Chr3:71730678-71730697 None:intergenic 30.0%
ATAAATAAATAGGGGATTGG+AGG - Chr3:71728072-71728091 None:intergenic 30.0%
ATGGTGCAATTTCAATTTGA+TGG - Chr3:71727607-71727626 None:intergenic 30.0%
ATTGCTTGTATTGAGTTTGA+AGG - Chr3:71728610-71728629 None:intergenic 30.0%
ATTGTCTGCATAAAAGAAAC+TGG - Chr3:71726432-71726451 None:intergenic 30.0%
CATAAACACGGTTTATTACA+TGG + Chr3:71729916-71729935 MsG0380015550.01.T01:CDS 30.0%
CTAATACCAACTCCTTATAA+TGG + Chr3:71726922-71726941 MsG0380015550.01.T01:intron 30.0%
CTACTAGACAAATTACTGTT+AGG - Chr3:71730886-71730905 None:intergenic 30.0%
CTATCATATATTACCACCAA+TGG + Chr3:71729553-71729572 MsG0380015550.01.T01:intron 30.0%
GACAAGAAAATTGAAAAAGG+AGG - Chr3:71730775-71730794 None:intergenic 30.0%
GATCATAGTAAAGACTTCTA+TGG + Chr3:71726163-71726182 MsG0380015550.01.T01:intron 30.0%
GTAACAACTGTTAAAGCAAA+AGG + Chr3:71728633-71728652 MsG0380015550.01.T01:intron 30.0%
GTCTTATATATCTCACCTTA+AGG - Chr3:71730144-71730163 None:intergenic 30.0%
TAAAAGATCATTTGACACAC+AGG - Chr3:71729675-71729694 None:intergenic 30.0%
TAAATAAATAGGGGATTGGA+GGG - Chr3:71728071-71728090 None:intergenic 30.0%
TAAATATCAGCCAAGAAACA+AGG - Chr3:71730441-71730460 None:intergenic 30.0%
TAGCACATTAGTAATTGTAC+TGG - Chr3:71731003-71731022 None:intergenic 30.0%
TATTGTCCATTATAAGGAGT+TGG - Chr3:71726931-71726950 None:intergenic 30.0%
TATTGTTGAGGTAGTATAGT+GGG + Chr3:71730320-71730339 MsG0380015550.01.T01:intron 30.0%
TCAGTTACTTAACACAATCA+AGG - Chr3:71727334-71727353 None:intergenic 30.0%
TCGATTCTTTAAGCATTCTT+AGG + Chr3:71724440-71724459 MsG0380015550.01.T01:intron 30.0%
TCTCCCAATGTATCTTAAAA+AGG + Chr3:71725805-71725824 MsG0380015550.01.T01:intron 30.0%
TGAAAGGCAGTTATAACTAT+AGG + Chr3:71730680-71730699 MsG0380015550.01.T01:three_prime_UTR 30.0%
TGAATTGAAACCAATTAACC+AGG - Chr3:71730218-71730237 None:intergenic 30.0%
TGTATACATGGAGAGAAAAA+AGG + Chr3:71727416-71727435 MsG0380015550.01.T01:intron 30.0%
TTAATACTCATCCATATCCT+TGG + Chr3:71730008-71730027 MsG0380015550.01.T01:CDS 30.0%
TTATTGTTGAGGTAGTATAG+TGG + Chr3:71730319-71730338 MsG0380015550.01.T01:intron 30.0%
TTCAAATACTCCTGGTTAAT+TGG + Chr3:71730205-71730224 MsG0380015550.01.T01:intron 30.0%
TTGATTGTGTTAAGTAACTG+AGG + Chr3:71727333-71727352 MsG0380015550.01.T01:intron 30.0%
TTGGCTTAGTTACATATATG+GGG + Chr3:71730643-71730662 MsG0380015550.01.T01:three_prime_UTR 30.0%
! AAACCCAGTATCAATTTTCT+CGG + Chr3:71725320-71725339 MsG0380015550.01.T01:intron 30.0%
! AACCCTTTTATTGTGGATTT+TGG - Chr3:71724084-71724103 None:intergenic 30.0%
! ACAAAAGATTTTGTGCATGT+TGG - Chr3:71725068-71725087 None:intergenic 30.0%
! ACCCTGTATTCAAATTTTTG+GGG - Chr3:71730733-71730752 None:intergenic 30.0%
! AGCTTTCAAGTAGAATCAAT+TGG + Chr3:71724954-71724973 MsG0380015550.01.T01:intron 30.0%
! ATTGATTCTACTTGAAAGCT+AGG - Chr3:71724954-71724973 None:intergenic 30.0%
! CATTGATAATAATGCCTTAC+CGG + Chr3:71727577-71727596 MsG0380015550.01.T01:intron 30.0%
! CTGCATTTTCATTAAAACCA+CGG - Chr3:71727239-71727258 None:intergenic 30.0%
! GAACCCTGTATTCAAATTTT+TGG - Chr3:71730735-71730754 None:intergenic 30.0%
! GAGATGAGCTTTAATATGTT+TGG + Chr3:71726660-71726679 MsG0380015550.01.T01:CDS 30.0%
! GGTTAATTGGTTTCAATTCA+TGG + Chr3:71730218-71730237 MsG0380015550.01.T01:intron 30.0%
! GTTTGATAGTTTATACCCAT+CGG - Chr3:71729397-71729416 None:intergenic 30.0%
! TCTTTCTAACCCTTTTATTG+TGG - Chr3:71724091-71724110 None:intergenic 30.0%
! TGCATTTTCATTAAAACCAC+GGG - Chr3:71727238-71727257 None:intergenic 30.0%
! TTAAAAATGGTCTTGATAGG+TGG + Chr3:71725697-71725716 MsG0380015550.01.T01:intron 30.0%
! TTAAATACCAATGTGGATTG+TGG - Chr3:71726107-71726126 None:intergenic 30.0%
! TTGTCTAGCATAGAGTTTTA+TGG + Chr3:71730790-71730809 MsG0380015550.01.T01:three_prime_UTR 30.0%
! TTGTTTCTTGGCTGATATTT+AGG + Chr3:71730440-71730459 MsG0380015550.01.T01:CDS 30.0%
! TTTCAAGTAGAATCAATTGG+AGG + Chr3:71724957-71724976 MsG0380015550.01.T01:intron 30.0%
! TTTTCTCGGATTTGAAAACT+CGG + Chr3:71725334-71725353 MsG0380015550.01.T01:intron 30.0%
! TTTTGGCATTAAATCAATGC+AGG + Chr3:71730943-71730962 MsG0380015550.01.T01:three_prime_UTR 30.0%
!! AACTCCTTATAATGGACAAT+AGG + Chr3:71726930-71726949 MsG0380015550.01.T01:intron 30.0%
!! CTAATGATGTCGATTGTTTT+AGG + Chr3:71724591-71724610 MsG0380015550.01.T01:intron 30.0%
!! GACTAGGAAGTATTCTATAT+TGG + Chr3:71727011-71727030 MsG0380015550.01.T01:intron 30.0%
!! TGTCTAGCATAGAGTTTTAT+GGG + Chr3:71730791-71730810 MsG0380015550.01.T01:three_prime_UTR 30.0%
!! TTTCTTTTCTCTAACTTGTC+TGG + Chr3:71726829-71726848 MsG0380015550.01.T01:intron 30.0%
!!! AAAACTCTGTTGTTTTCCAA+TGG + Chr3:71724229-71724248 MsG0380015550.01.T01:CDS 30.0%
!!! AACCATCATGTTTTTTGTAC+AGG + Chr3:71730402-71730421 MsG0380015550.01.T01:intron 30.0%
!!! AATATTTTGACTGGCGTATT+TGG + Chr3:71726589-71726608 MsG0380015550.01.T01:CDS 30.0%
!!! ATATTTTGACTGGCGTATTT+GGG + Chr3:71726590-71726609 MsG0380015550.01.T01:CDS 30.0%
AAAACCAAAAATCCGCCATA+TGG - Chr3:71725588-71725607 None:intergenic 35.0%
AAATCAGATCTACATCTGGA+AGG + Chr3:71725889-71725908 MsG0380015550.01.T01:intron 35.0%
AACCGATTATTGAACCTTAC+CGG - Chr3:71726478-71726497 None:intergenic 35.0%
AACTTCAAACAGATCTGTCA+TGG + Chr3:71728801-71728820 MsG0380015550.01.T01:intron 35.0%
AACTTTACCTCTCACAAAAG+TGG + Chr3:71727157-71727176 MsG0380015550.01.T01:CDS 35.0%
AAGTTTGAATATAAAGCCGG+TGG - Chr3:71726505-71726524 None:intergenic 35.0%
AATCAGATCTACATCTGGAA+GGG + Chr3:71725890-71725909 MsG0380015550.01.T01:intron 35.0%
AATCTAGACATGTGAAGAAG+GGG - Chr3:71727666-71727685 None:intergenic 35.0%
AATTCAAGATTCACTCTCCA+TGG + Chr3:71728337-71728356 MsG0380015550.01.T01:intron 35.0%
ACAGTTACCAGTGTTATCAA+TGG - Chr3:71725631-71725650 None:intergenic 35.0%
ACCCCCAAAAATTTGAATAC+AGG + Chr3:71730728-71730747 MsG0380015550.01.T01:three_prime_UTR 35.0%
ACTTGCATCCCATGATAAAT+TGG + Chr3:71728759-71728778 MsG0380015550.01.T01:intron 35.0%
AGAACATTCACTGAGTAGAT+TGG - Chr3:71727751-71727770 None:intergenic 35.0%
AGAATAGAACTCTGGTTAAG+AGG - Chr3:71729132-71729151 None:intergenic 35.0%
AGAGGAACAGGATAAAAACA+TGG + Chr3:71728553-71728572 MsG0380015550.01.T01:intron 35.0%
AGATGAGGAATATTCATCCT+CGG - Chr3:71728151-71728170 None:intergenic 35.0%
ATAACTTCCACAATCCACAT+TGG + Chr3:71726097-71726116 MsG0380015550.01.T01:CDS 35.0%
ATGAGCAACCTAATTGTCAA+TGG + Chr3:71728701-71728720 MsG0380015550.01.T01:intron 35.0%
ATGCAGAACACAAATGACAT+CGG - Chr3:71726372-71726391 None:intergenic 35.0%
ATGTAGAGAACTCAGAAGAT+TGG + Chr3:71728986-71729005 MsG0380015550.01.T01:intron 35.0%
ATTAAAACCACGGGTTCTAT+TGG - Chr3:71727229-71727248 None:intergenic 35.0%
ATTCTCCTTCAAATTGGACT+TGG + Chr3:71728656-71728675 MsG0380015550.01.T01:intron 35.0%
ATTGGAGCTAATCACATCTA+TGG + Chr3:71727029-71727048 MsG0380015550.01.T01:intron 35.0%
ATTGTGTTAAGTAACTGAGG+TGG + Chr3:71727336-71727355 MsG0380015550.01.T01:intron 35.0%
ATTTGATTGTTATGCCTGCA+AGG - Chr3:71727107-71727126 None:intergenic 35.0%
CAATGAACATCTCTTTGAAC+TGG + Chr3:71727537-71727556 MsG0380015550.01.T01:intron 35.0%
CAATGATGATTGGGAGATTA+AGG - Chr3:71726144-71726163 None:intergenic 35.0%
CAATTGCACTAACCATTTCA+AGG + Chr3:71728897-71728916 MsG0380015550.01.T01:intron 35.0%
CAGATGTAGATCTGATTTCT+GGG - Chr3:71725887-71725906 None:intergenic 35.0%
CATGGCCAATTTATGAAAGA+CGG + Chr3:71725557-71725576 MsG0380015550.01.T01:intron 35.0%
CCATGATAAATTGGTATCAG+GGG + Chr3:71728768-71728787 MsG0380015550.01.T01:intron 35.0%
CCATTGAAGAAGAAATACGA+AGG - Chr3:71724206-71724225 None:intergenic 35.0%
CCCATGATAAATTGGTATCA+GGG + Chr3:71728767-71728786 MsG0380015550.01.T01:intron 35.0%
CCCCCAAAAATTTGAATACA+GGG + Chr3:71730729-71730748 MsG0380015550.01.T01:three_prime_UTR 35.0%
CCCTGATACCAATTTATCAT+GGG - Chr3:71728770-71728789 None:intergenic 35.0%
CCTTCGTATTTCTTCTTCAA+TGG + Chr3:71724203-71724222 MsG0380015550.01.T01:exon 35.0%
CGGTGACAAAAAATGATTTC+AGG + Chr3:71724750-71724769 MsG0380015550.01.T01:intron 35.0%
CTAAACAACTCAAGACTTCA+TGG - Chr3:71725278-71725297 None:intergenic 35.0%
CTCTCTTGTGTATTCTTCAA+TGG + Chr3:71724265-71724284 MsG0380015550.01.T01:CDS 35.0%
CTGTAACATTTAACGTTGCT+GGG + Chr3:71730116-71730135 MsG0380015550.01.T01:CDS 35.0%
CTTAACCAGAGTTCTATTCT+GGG + Chr3:71729132-71729151 MsG0380015550.01.T01:intron 35.0%
CTTCTCTTATACCCATTGTT+GGG + Chr3:71726613-71726632 MsG0380015550.01.T01:CDS 35.0%
GAATACTTCCTAGTCTACAT+TGG - Chr3:71727006-71727025 None:intergenic 35.0%
GAATAGAACTCTGGTTAAGA+GGG - Chr3:71729131-71729150 None:intergenic 35.0%
GAATGGAATAAGAAGAAACC+TGG - Chr3:71724335-71724354 None:intergenic 35.0%
GCAGAAAAAGAGGAATAGAT+GGG - Chr3:71727919-71727938 None:intergenic 35.0%
GGAGTGGATCACATAAAAAA+TGG - Chr3:71730089-71730108 None:intergenic 35.0%
GGTGGTAATATATGATAGAC+TGG - Chr3:71729551-71729570 None:intergenic 35.0%
GTTAAATGTTACAGCAGTAG+TGG - Chr3:71730110-71730129 None:intergenic 35.0%
TCACAATGACAAGGAAAGAA+CGG - Chr3:71727492-71727511 None:intergenic 35.0%
TCAGTAACAGAACACAACTT+TGG - Chr3:71725222-71725241 None:intergenic 35.0%
TCCAACATCATCAAGAAACT+GGG - Chr3:71728398-71728417 None:intergenic 35.0%
TCCCATGATAAATTGGTATC+AGG + Chr3:71728766-71728785 MsG0380015550.01.T01:intron 35.0%
TCTCAATGCCATTGACAATT+AGG - Chr3:71728712-71728731 None:intergenic 35.0%
TCTTAACCAGAGTTCTATTC+TGG + Chr3:71729131-71729150 MsG0380015550.01.T01:intron 35.0%
TCTTGTGTATTCTTCAATGG+TGG + Chr3:71724268-71724287 MsG0380015550.01.T01:CDS 35.0%
TGCAGAAAATGTTCCAGTAA+CGG + Chr3:71727254-71727273 MsG0380015550.01.T01:intron 35.0%
TGCATGGATACAAATTTGAC+AGG + Chr3:71726748-71726767 MsG0380015550.01.T01:CDS 35.0%
TGTAGAGAACTCAGAAGATT+GGG + Chr3:71728987-71729006 MsG0380015550.01.T01:intron 35.0%
TGTGTACTGCAGAAAAATCT+TGG - Chr3:71729866-71729885 None:intergenic 35.0%
TTAAAACCACGGGTTCTATT+GGG - Chr3:71727228-71727247 None:intergenic 35.0%
TTAGTCACAAAGTGCATTGT+GGG + Chr3:71730273-71730292 MsG0380015550.01.T01:intron 35.0%
TTCTCCTTCAAATTGGACTT+GGG + Chr3:71728657-71728676 MsG0380015550.01.T01:intron 35.0%
TTCTCTTATACCCATTGTTG+GGG + Chr3:71726614-71726633 MsG0380015550.01.T01:CDS 35.0%
TTCTGCATTAACATAGTGCT+GGG + Chr3:71726384-71726403 MsG0380015550.01.T01:CDS 35.0%
TTCTTTCCTTGTCATTGTGA+AGG + Chr3:71727492-71727511 MsG0380015550.01.T01:intron 35.0%
TTCTTTGTATCTTTCGGTTG+TGG - Chr3:71728177-71728196 None:intergenic 35.0%
TTGAGTTTGAAGGTAGAGTT+TGG - Chr3:71728600-71728619 None:intergenic 35.0%
TTGGAGCTAATCACATCTAT+GGG + Chr3:71727030-71727049 MsG0380015550.01.T01:intron 35.0%
TTTAGTCACAAAGTGCATTG+TGG + Chr3:71730272-71730291 MsG0380015550.01.T01:intron 35.0%
! ACAGATCTGTTTGAAGTTAC+CGG - Chr3:71728799-71728818 None:intergenic 35.0%
! AGTAGATTGGTGTTCTTTGT+TGG - Chr3:71727738-71727757 None:intergenic 35.0%
! ATTTAAGGCAGGTGTATACA+TGG + Chr3:71727404-71727423 MsG0380015550.01.T01:intron 35.0%
! ATTTCAATTTGATGGCACAC+CGG - Chr3:71727599-71727618 None:intergenic 35.0%
! CCAACTTGTTTAGAAAATGC+AGG + Chr3:71729429-71729448 MsG0380015550.01.T01:intron 35.0%
! CCACTTGTTAACGATGATAA+CGG - Chr3:71724307-71724326 None:intergenic 35.0%
! CCTGCATTTTCTAAACAAGT+TGG - Chr3:71729432-71729451 None:intergenic 35.0%
! GCATGTCTAAGATAAATGCA+AGG - Chr3:71729795-71729814 None:intergenic 35.0%
! GTAGATTGGTGTTCTTTGTT+GGG - Chr3:71727737-71727756 None:intergenic 35.0%
! GTGGATTGTGGAAGTTATAA+AGG - Chr3:71726095-71726114 None:intergenic 35.0%
! TGATTTGCGATAACATTAGC+TGG - Chr3:71727081-71727100 None:intergenic 35.0%
! TTTGATGGTCAAAAAAGGTC+TGG + Chr3:71725835-71725854 MsG0380015550.01.T01:intron 35.0%
!! AAACAAGTTGGTCCATTCAA+TGG - Chr3:71729420-71729439 None:intergenic 35.0%
!! AACAAGTTGGTCCATTCAAT+GGG - Chr3:71729419-71729438 None:intergenic 35.0%
!! CCCTGTATTCAAATTTTTGG+GGG - Chr3:71730732-71730751 None:intergenic 35.0%
!! GGAGGGAAGTTGATATAAAA+TGG - Chr3:71726985-71727004 None:intergenic 35.0%
!! TAATTTTGAAGGAGACCTTG+AGG - Chr3:71727991-71728010 None:intergenic 35.0%
!!! AGGTAGTTTTTTAGATCAGC+TGG + Chr3:71727436-71727455 MsG0380015550.01.T01:intron 35.0%
!!! GGTAGTTTTTTAGATCAGCT+GGG + Chr3:71727437-71727456 MsG0380015550.01.T01:intron 35.0%
!!! TGTGGAGGAAATATTTTGAC+TGG + Chr3:71726580-71726599 MsG0380015550.01.T01:CDS 35.0%
AAAAGGTCTGGTGGTTTCTT+AGG + Chr3:71725847-71725866 MsG0380015550.01.T01:intron 40.0%
AAAGAGCCTTCACAATGACA+AGG - Chr3:71727501-71727520 None:intergenic 40.0%
AAGAGGGGGATAATAGAGAT+AGG - Chr3:71728229-71728248 None:intergenic 40.0%
AAGGCAATGGAGTTCTTGAA+TGG + Chr3:71729984-71730003 MsG0380015550.01.T01:CDS 40.0%
ACACTGTTGCACTTTACCAT+TGG - Chr3:71729572-71729591 None:intergenic 40.0%
ACTTCCTAGTCTACATTGGA+GGG - Chr3:71727002-71727021 None:intergenic 40.0%
AGAAACCCAGAATAGAACTC+TGG - Chr3:71729140-71729159 None:intergenic 40.0%
AGATCATTTGACACACAGGT+AGG - Chr3:71729671-71729690 None:intergenic 40.0%
AGATGATTCACTTGGGAAAG+GGG + Chr3:71727380-71727399 MsG0380015550.01.T01:intron 40.0%
AGTGGACACATGATACTGAT+AGG - Chr3:71726251-71726270 None:intergenic 40.0%
ATCAGATCTACATCTGGAAG+GGG + Chr3:71725891-71725910 MsG0380015550.01.T01:intron 40.0%
ATGCAAAGATGAAATCAGCC+TGG - Chr3:71729338-71729357 None:intergenic 40.0%
ATTTGAAAACTCGGATGGTC+GGG + Chr3:71725343-71725362 MsG0380015550.01.T01:intron 40.0%
CACCGGTAAGGTTCAATAAT+CGG + Chr3:71726473-71726492 MsG0380015550.01.T01:intron 40.0%
CACTAACCATTTCAAGGGTT+GGG + Chr3:71728903-71728922 MsG0380015550.01.T01:intron 40.0%
CATGCAAAAGAGATTCTGCA+AGG - Chr3:71726734-71726753 None:intergenic 40.0%
CCAACATCATCAAGAAACTG+GGG - Chr3:71728397-71728416 None:intergenic 40.0%
CCAGAAATCAGATCTACATC+TGG + Chr3:71725885-71725904 MsG0380015550.01.T01:intron 40.0%
CCAGATGTAGATCTGATTTC+TGG - Chr3:71725888-71725907 None:intergenic 40.0%
CCCCTGATACCAATTTATCA+TGG - Chr3:71728771-71728790 None:intergenic 40.0%
CCGTTATCATCGTTAACAAG+TGG + Chr3:71724304-71724323 MsG0380015550.01.T01:CDS 40.0%
CGACACCGTCTTTCATAAAT+TGG - Chr3:71725565-71725584 None:intergenic 40.0%
CGCAGAAAAAGAGGAATAGA+TGG - Chr3:71727920-71727939 None:intergenic 40.0%
CGTCTTTCATAAATTGGCCA+TGG - Chr3:71725559-71725578 None:intergenic 40.0%
CTCCAACATCATCAAGAAAC+TGG - Chr3:71728399-71728418 None:intergenic 40.0%
CTTTCATAAATTGGCCATGG+CGG - Chr3:71725556-71725575 None:intergenic 40.0%
GAGATGATTCACTTGGGAAA+GGG + Chr3:71727379-71727398 MsG0380015550.01.T01:intron 40.0%
GATTTGAAAACTCGGATGGT+CGG + Chr3:71725342-71725361 MsG0380015550.01.T01:intron 40.0%
GCAGAAAATGTTCCAGTAAC+GGG + Chr3:71727255-71727274 MsG0380015550.01.T01:intron 40.0%
GCTGTAACATTTAACGTTGC+TGG + Chr3:71730115-71730134 MsG0380015550.01.T01:CDS 40.0%
GCTTCTCTTATACCCATTGT+TGG + Chr3:71726612-71726631 MsG0380015550.01.T01:CDS 40.0%
GGAACAGGATAAAAACATGG+TGG + Chr3:71728556-71728575 MsG0380015550.01.T01:intron 40.0%
GGGATAATAGAGATAGGAGT+AGG - Chr3:71728223-71728242 None:intergenic 40.0%
GGTCGGGTTTAAATCAATCT+AGG + Chr3:71725359-71725378 MsG0380015550.01.T01:intron 40.0%
GTAACCAATTAGATGTTGCG+AGG - Chr3:71727792-71727811 None:intergenic 40.0%
GTAGAGAACTCAGAAGATTG+GGG + Chr3:71728988-71729007 MsG0380015550.01.T01:intron 40.0%
GTAGGTCTACCTATAGGATA+GGG - Chr3:71729653-71729672 None:intergenic 40.0%
GTATGTGGATAGTCTGTACA+GGG - Chr3:71726869-71726888 None:intergenic 40.0%
GTCAACAATAAAAAGGCCCA+CGG + Chr3:71727295-71727314 MsG0380015550.01.T01:intron 40.0%
GTGGACACATGATACTGATA+GGG - Chr3:71726250-71726269 None:intergenic 40.0%
GTGTTGTCAAATATCGTCCA+TGG + Chr3:71725503-71725522 MsG0380015550.01.T01:intron 40.0%
GTTACCAGTGTTATCAATGG+CGG - Chr3:71725628-71725647 None:intergenic 40.0%
GTTCTGCATTAACATAGTGC+TGG + Chr3:71726383-71726402 MsG0380015550.01.T01:CDS 40.0%
TACTCATCCATATCCTTGGT+CGG + Chr3:71730012-71730031 MsG0380015550.01.T01:CDS 40.0%
TACTTCCTAGTCTACATTGG+AGG - Chr3:71727003-71727022 None:intergenic 40.0%
TAGAGTCTGACAAAACTGAG+AGG + Chr3:71728535-71728554 MsG0380015550.01.T01:intron 40.0%
TAGTAATCTTCAGGGTTTCC+AGG + Chr3:71728843-71728862 MsG0380015550.01.T01:intron 40.0%
TATGTGGATAGTCTGTACAG+GGG - Chr3:71726868-71726887 None:intergenic 40.0%
TCATTGAACTGGAGCTGTTA+TGG + Chr3:71725194-71725213 MsG0380015550.01.T01:intron 40.0%
TCCATTGCCTTCAAGTAACA+TGG - Chr3:71729975-71729994 None:intergenic 40.0%
TCGGCAACATCAAGATAGAA+AGG - Chr3:71729378-71729397 None:intergenic 40.0%
TCTATCTTGATGTTGCCGAT+GGG + Chr3:71729379-71729398 MsG0380015550.01.T01:intron 40.0%
TCTCTTATACCCATTGTTGG+GGG + Chr3:71726615-71726634 MsG0380015550.01.T01:CDS 40.0%
TCTGCATTAACATAGTGCTG+GGG + Chr3:71726385-71726404 MsG0380015550.01.T01:CDS 40.0%
TGGACACATGATACTGATAG+GGG - Chr3:71726249-71726268 None:intergenic 40.0%
TGGACTAACAACATCAAAGC+AGG - Chr3:71726965-71726984 None:intergenic 40.0%
TTCAAACAGATCTGTCATGG+CGG + Chr3:71728804-71728823 MsG0380015550.01.T01:intron 40.0%
TTCAAATTGGACTTGGGAGT+GGG + Chr3:71728663-71728682 MsG0380015550.01.T01:intron 40.0%
TTCTATCTTGATGTTGCCGA+TGG + Chr3:71729378-71729397 MsG0380015550.01.T01:intron 40.0%
TTGTCAAATATCGTCCATGG+CGG + Chr3:71725506-71725525 MsG0380015550.01.T01:intron 40.0%
! ATCTGATTTCTGGGAACCAA+GGG - Chr3:71725878-71725897 None:intergenic 40.0%
! ATTCTTTTCCAGCGATCTTC+AGG - Chr3:71726345-71726364 None:intergenic 40.0%
! CAATTAGGTTGCTCATTAGC+TGG - Chr3:71728697-71728716 None:intergenic 40.0%
! CATAAAAGGCGCAGAAAAAG+AGG - Chr3:71727929-71727948 None:intergenic 40.0%
! CTCTAACTTGTCTGGAATTC+TGG + Chr3:71726837-71726856 MsG0380015550.01.T01:intron 40.0%
! CTCTTTTTCTGCGCCTTTTA+TGG + Chr3:71727927-71727946 MsG0380015550.01.T01:intron 40.0%
! CTTGCAGAATCTCTTTTGCA+TGG + Chr3:71726732-71726751 MsG0380015550.01.T01:CDS 40.0%
! CTTGTGGGTTGTACATTCTA+TGG + Chr3:71730505-71730524 MsG0380015550.01.T01:CDS 40.0%
! GGTTTCTTCTGCCATTTGAA+AGG + Chr3:71730664-71730683 MsG0380015550.01.T01:three_prime_UTR 40.0%
! TCTCTTTGTCCTAGTTTGTG+AGG + Chr3:71728733-71728752 MsG0380015550.01.T01:intron 40.0%
! TGCATTGTGGGTTGTGTAAA+TGG + Chr3:71730285-71730304 MsG0380015550.01.T01:intron 40.0%
! TTCTTTTCCAGCGATCTTCA+GGG - Chr3:71726344-71726363 None:intergenic 40.0%
!! ACATTTCGAGAAGCACTGAA+AGG - Chr3:71725759-71725778 None:intergenic 40.0%
!! ACTTGGGAAAGGGGTATTTA+AGG + Chr3:71727389-71727408 MsG0380015550.01.T01:intron 40.0%
!! AGGAGGCTTGGTTATGATTT+TGG - Chr3:71725167-71725186 None:intergenic 40.0%
!! ATGTGGCGAGTTTGTTAAGA+GGG - Chr3:71728245-71728264 None:intergenic 40.0%
!! CAGTTTCTTGATGATGTTGG+AGG + Chr3:71728397-71728416 MsG0380015550.01.T01:intron 40.0%
!! CTTGCACAGTTGTTTTGCAA+TGG + Chr3:71726553-71726572 MsG0380015550.01.T01:intron 40.0%
!! GGAGGCTTGGTTATGATTTT+GGG - Chr3:71725166-71725185 None:intergenic 40.0%
!! TAGAGTTAGGTTGGGAGTTT+CGG - Chr3:71728312-71728331 None:intergenic 40.0%
!! TTGTTTTGCAATGGCTAGTG+TGG + Chr3:71726562-71726581 MsG0380015550.01.T01:CDS 40.0%
!!! GGATTTTTGGTTTTCCACCA+TGG + Chr3:71725594-71725613 MsG0380015550.01.T01:intron 40.0%
!!! TATTTTTAGTTCTGGGGTGC+TGG + Chr3:71730045-71730064 MsG0380015550.01.T01:CDS 40.0%
AACGGGTGTGGTCCAATTAT+TGG + Chr3:71727272-71727291 MsG0380015550.01.T01:intron 45.0%
AACTCAGAAGATTGGGGACT+GGG + Chr3:71728994-71729013 MsG0380015550.01.T01:intron 45.0%
AACTTAACAATCAACGCCCG+TGG - Chr3:71730824-71730843 None:intergenic 45.0%
AAGTAACTGAGGTGGCAGTT+GGG + Chr3:71727344-71727363 MsG0380015550.01.T01:intron 45.0%
AATTAGATGTTGCGAGGCAG+GGG - Chr3:71727786-71727805 None:intergenic 45.0%
ACACAGGTAGGTCTACCTAT+AGG - Chr3:71729659-71729678 None:intergenic 45.0%
ACATCATCAAGAAACTGGGG+TGG - Chr3:71728394-71728413 None:intergenic 45.0%
ACATGTGAAGAAGGGGCAAA+GGG - Chr3:71727659-71727678 None:intergenic 45.0%
ACCAAGATCATGGTCGCATA+AGG - Chr3:71729944-71729963 None:intergenic 45.0%
ACCCAACTAGTGACTCAAAG+TGG - Chr3:71724633-71724652 None:intergenic 45.0%
ACCTTATGCGACCATGATCT+TGG + Chr3:71729940-71729959 MsG0380015550.01.T01:CDS 45.0%
ACGGGTGTGGTCCAATTATT+GGG + Chr3:71727273-71727292 MsG0380015550.01.T01:intron 45.0%
ACTTAACAATCAACGCCCGT+GGG - Chr3:71730823-71730842 None:intergenic 45.0%
ACTTCCCTCCAATGTAGACT+AGG + Chr3:71726995-71727014 MsG0380015550.01.T01:intron 45.0%
AGAAGAATCCCCCCAACAAT+GGG - Chr3:71726627-71726646 None:intergenic 45.0%
AGACCTTGAGGACCATTCAA+AGG - Chr3:71727979-71727998 None:intergenic 45.0%
AGAGGGTGAGTTATCATCCT+AGG - Chr3:71729114-71729133 None:intergenic 45.0%
AGTTCAATGAGCAAGCTAGG+AGG - Chr3:71725184-71725203 None:intergenic 45.0%
ATAATGATGAGAGCCGACCA+AGG - Chr3:71730028-71730047 None:intergenic 45.0%
ATCGCAAATCAGTACCTTGC+AGG + Chr3:71727090-71727109 MsG0380015550.01.T01:CDS 45.0%
ATGCTGCAGAAATGTGAGTG+GGG - Chr3:71728288-71728307 None:intergenic 45.0%
CAATAAAAAGGCCCACGGTA+TGG + Chr3:71727300-71727319 MsG0380015550.01.T01:intron 45.0%
CAATGGCTGAGCAGATAAAG+TGG - Chr3:71726269-71726288 None:intergenic 45.0%
CAATTAGATGTTGCGAGGCA+GGG - Chr3:71727787-71727806 None:intergenic 45.0%
CACTCCCAAGTCCAATTTGA+AGG - Chr3:71728664-71728683 None:intergenic 45.0%
CACTGCCTTGAATCCTAAGA+GGG + Chr3:71728439-71728458 MsG0380015550.01.T01:intron 45.0%
CACTTTATCTGCTCAGCCAT+TGG + Chr3:71726267-71726286 MsG0380015550.01.T01:CDS 45.0%
CATCATCAAGAAACTGGGGT+GGG - Chr3:71728393-71728412 None:intergenic 45.0%
CATGCTGCAGAAATGTGAGT+GGG - Chr3:71728289-71728308 None:intergenic 45.0%
CCAAATCGACCCTATCCTAT+AGG + Chr3:71729641-71729660 MsG0380015550.01.T01:intron 45.0%
CCACCATCTCGATATCATGT+CGG + Chr3:71727836-71727855 MsG0380015550.01.T01:intron 45.0%
CCCTTGAAATGACGTCGAAA+CGG - Chr3:71728475-71728494 None:intergenic 45.0%
CCGTTTCGACGTCATTTCAA+GGG + Chr3:71728472-71728491 MsG0380015550.01.T01:intron 45.0%
CCTATAGGATAGGGTCGATT+TGG - Chr3:71729644-71729663 None:intergenic 45.0%
CGACATGATATCGAGATGGT+GGG - Chr3:71727838-71727857 None:intergenic 45.0%
CGATTATTGAACCTTACCGG+TGG - Chr3:71726475-71726494 None:intergenic 45.0%
CGTTAACAAGTGGATCTTCC+AGG + Chr3:71724314-71724333 MsG0380015550.01.T01:CDS 45.0%
CTCATCCCTCTTAGGATTCA+AGG - Chr3:71728447-71728466 None:intergenic 45.0%
CTCGGATTTGAAAACTCGGA+TGG + Chr3:71725338-71725357 MsG0380015550.01.T01:intron 45.0%
CTCTTATACCCATTGTTGGG+GGG + Chr3:71726616-71726635 MsG0380015550.01.T01:CDS 45.0%
CTGACAAAACTGAGAGGAAC+AGG + Chr3:71728541-71728560 MsG0380015550.01.T01:intron 45.0%
CTGTTGCACTTTACCATTGG+TGG - Chr3:71729569-71729588 None:intergenic 45.0%
CTTCAAATTGGACTTGGGAG+TGG + Chr3:71728662-71728681 MsG0380015550.01.T01:intron 45.0%
CTTGAATCCTAAGAGGGATG+AGG + Chr3:71728445-71728464 MsG0380015550.01.T01:intron 45.0%
GAGATCTGATTACGCTCCAT+TGG - Chr3:71724248-71724267 None:intergenic 45.0%
GAGGAATATTCATCCTCGGA+CGG - Chr3:71728147-71728166 None:intergenic 45.0%
GATGGTCAAAAAAGGTCTGG+TGG + Chr3:71725838-71725857 MsG0380015550.01.T01:intron 45.0%
GCAAGTCATCCTCACAAACT+AGG - Chr3:71728745-71728764 None:intergenic 45.0%
GCACTAACCATTTCAAGGGT+TGG + Chr3:71728902-71728921 MsG0380015550.01.T01:intron 45.0%
GGAGATGATTCACTTGGGAA+AGG + Chr3:71727378-71727397 MsG0380015550.01.T01:intron 45.0%
GGTAGGTCTACCTATAGGAT+AGG - Chr3:71729654-71729673 None:intergenic 45.0%
GGTATGTGGATAGTCTGTAC+AGG - Chr3:71726870-71726889 None:intergenic 45.0%
TAACGTTGCTGGGAACCTTA+AGG + Chr3:71730126-71730145 MsG0380015550.01.T01:CDS 45.0%
TAAGTAACTGAGGTGGCAGT+TGG + Chr3:71727343-71727362 MsG0380015550.01.T01:intron 45.0%
TACTCTCCATACCGTCAAAG+TGG + Chr3:71727809-71727828 MsG0380015550.01.T01:intron 45.0%
TATCAATGCCTTGCCCTAGA+CGG - Chr3:71727565-71727584 None:intergenic 45.0%
TCAAATTGGACTTGGGAGTG+GGG + Chr3:71728664-71728683 MsG0380015550.01.T01:intron 45.0%
TCAACACCCAACCCTTGAAA+TGG - Chr3:71728912-71728931 None:intergenic 45.0%
TCAGATCTACATCTGGAAGG+GGG + Chr3:71725892-71725911 MsG0380015550.01.T01:intron 45.0%
TCAGGGTCAACAGTTATCAG+TGG - Chr3:71726327-71726346 None:intergenic 45.0%
TCCAGTTCAATGAGCAAGCT+AGG - Chr3:71725187-71725206 None:intergenic 45.0%
TCTACTGCGGGAATGAAGTA+GGG - Chr3:71728507-71728526 None:intergenic 45.0%
TCTTTAGGCGTGATGAGAGA+CGG - Chr3:71728961-71728980 None:intergenic 45.0%
TGAGTCACTAGTTGGGTAGA+GGG + Chr3:71724636-71724655 MsG0380015550.01.T01:intron 45.0%
TGCCTTCAAGTAACATGGCA+GGG - Chr3:71729970-71729989 None:intergenic 45.0%
TGGAGGGAGATGATTCACTT+GGG + Chr3:71727373-71727392 MsG0380015550.01.T01:intron 45.0%
TGGGAGATTAAGGTGACTTG+AGG - Chr3:71726134-71726153 None:intergenic 45.0%
TGTACAACCCACAAGAGTGA+TGG - Chr3:71730500-71730519 None:intergenic 45.0%
TGTAGCCAAACAGCCAAGTA+AGG - Chr3:71726697-71726716 None:intergenic 45.0%
TGTCCGACATGATATCGAGA+TGG - Chr3:71727842-71727861 None:intergenic 45.0%
TTGAGTCACTAGTTGGGTAG+AGG + Chr3:71724635-71724654 MsG0380015550.01.T01:intron 45.0%
TTGCCTTCAAGTAACATGGC+AGG - Chr3:71729971-71729990 None:intergenic 45.0%
TTGGAGGGAGATGATTCACT+TGG + Chr3:71727372-71727391 MsG0380015550.01.T01:intron 45.0%
TTTCGGTTGTGGCTAAGATG+AGG - Chr3:71728166-71728185 None:intergenic 45.0%
! AATTTGATGGCACACCGGTA+AGG - Chr3:71727594-71727613 None:intergenic 45.0%
! ATGTTACAGCAGTAGTGGAG+TGG - Chr3:71730105-71730124 None:intergenic 45.0%
! ATTTCAAGGGTTGGGTGTTG+AGG + Chr3:71728911-71728930 MsG0380015550.01.T01:intron 45.0%
! CAATAATCGGTTTCTGCCAC+CGG + Chr3:71726486-71726505 MsG0380015550.01.T01:intron 45.0%
! CACAAAAGTGGCTTGCGAAT+GGG + Chr3:71727169-71727188 MsG0380015550.01.T01:CDS 45.0%
! CAGTTGCTGTCCTTGTTTCT+TGG + Chr3:71730428-71730447 MsG0380015550.01.T01:CDS 45.0%
! CTATCCGCCATTGATAACAC+TGG + Chr3:71725621-71725640 MsG0380015550.01.T01:intron 45.0%
! CTGGTAACTGTTCTAGACTG+CGG + Chr3:71725640-71725659 MsG0380015550.01.T01:intron 45.0%
! GATCTGATTTCTGGGAACCA+AGG - Chr3:71725879-71725898 None:intergenic 45.0%
! GATTGGTGTTCTTTGTTGGG+AGG - Chr3:71727734-71727753 None:intergenic 45.0%
! GCCACTTTGAGTCACTAGTT+GGG + Chr3:71724629-71724648 MsG0380015550.01.T01:intron 45.0%
! GCCATGTTACTTGAAGGCAA+TGG + Chr3:71729971-71729990 MsG0380015550.01.T01:CDS 45.0%
! TCACAAAAGTGGCTTGCGAA+TGG + Chr3:71727168-71727187 MsG0380015550.01.T01:CDS 45.0%
! TTTTGCAATGGCTAGTGTGG+AGG + Chr3:71726565-71726584 MsG0380015550.01.T01:CDS 45.0%
!! AAATGTTCCAGTAACGGGTG+TGG + Chr3:71727260-71727279 MsG0380015550.01.T01:intron 45.0%
!! AGCTTTGCTCTGGGGATTAT+AGG - Chr3:71728124-71728143 None:intergenic 45.0%
!! AGGGTCGATTTGGAGAAAAG+AGG - Chr3:71729634-71729653 None:intergenic 45.0%
!! ATATCGTCCATGGCGGATTA+CGG + Chr3:71725513-71725532 MsG0380015550.01.T01:intron 45.0%
!! CATGTTGGTTCCACTTCGAA+GGG - Chr3:71725053-71725072 None:intergenic 45.0%
!! CCCCAGTTTCTTGATGATGT+TGG + Chr3:71728394-71728413 MsG0380015550.01.T01:intron 45.0%
!! GATGTGGCGAGTTTGTTAAG+AGG - Chr3:71728246-71728265 None:intergenic 45.0%
!! GTGTTATCAATGGCGGATAG+TGG - Chr3:71725621-71725640 None:intergenic 45.0%
!! GTTAGAAGGTAGTGCTGATG+TGG - Chr3:71728262-71728281 None:intergenic 45.0%
!! GTTGAGGTAGTATAGTGGGT+TGG + Chr3:71730324-71730343 MsG0380015550.01.T01:intron 45.0%
!! GTTTTATGGGTTGTAGCCCA+CGG + Chr3:71730804-71730823 MsG0380015550.01.T01:three_prime_UTR 45.0%
!! TCCTAGCTTGCTCATTGAAC+TGG + Chr3:71725183-71725202 MsG0380015550.01.T01:intron 45.0%
!! TGCCACTTTGAGTCACTAGT+TGG + Chr3:71724628-71724647 MsG0380015550.01.T01:intron 45.0%
!! TGTGGCGAGTTTGTTAAGAG+GGG - Chr3:71728244-71728263 None:intergenic 45.0%
!! TTAATAATGGACCACTGGCG+AGG + Chr3:71729086-71729105 MsG0380015550.01.T01:intron 45.0%
!! TTTTATGGGTTGTAGCCCAC+GGG + Chr3:71730805-71730824 MsG0380015550.01.T01:three_prime_UTR 45.0%
!!! AAAAGTTTTTTTTTTTTTTT+GGG + Chr3:71724803-71724822 MsG0380015550.01.T01:intron 5.0%
!!! GTTATTATTTTTTTTTTTTT+TGG + Chr3:71725917-71725936 MsG0380015550.01.T01:intron 5.0%
!!! TAAAAGTTTTTTTTTTTTTT+TGG + Chr3:71724802-71724821 MsG0380015550.01.T01:intron 5.0%
!!! TATATTTGTTAATTTTATAA+TGG + Chr3:71729047-71729066 MsG0380015550.01.T01:intron 5.0%
!!! TTATTTTCAATAAATAAATA+GGG - Chr3:71728081-71728100 None:intergenic 5.0%
!!! TTTATTTTCAATAAATAAAT+AGG - Chr3:71728082-71728101 None:intergenic 5.0%
AAAAAGGCCCACGGTATGGA+AGG + Chr3:71727304-71727323 MsG0380015550.01.T01:intron 50.0%
AAACAGATCTGTCATGGCGG+TGG + Chr3:71728807-71728826 MsG0380015550.01.T01:intron 50.0%
AATGAGCAAGCTAGGAGGCT+TGG - Chr3:71725179-71725198 None:intergenic 50.0%
AATTGCACCCTCACTGGCAT+TGG - Chr3:71728882-71728901 None:intergenic 50.0%
AATTGGACCACACCCGTTAC+TGG - Chr3:71727270-71727289 None:intergenic 50.0%
AGATAGGAGTAGGACTCGAG+TGG - Chr3:71728213-71728232 None:intergenic 50.0%
AGTCACTAGTTGGGTAGAGG+GGG + Chr3:71724638-71724657 MsG0380015550.01.T01:intron 50.0%
ATAGGAGTAGGACTCGAGTG+GGG - Chr3:71728211-71728230 None:intergenic 50.0%
ATGAGAGCCGACCAAGGATA+TGG - Chr3:71730022-71730041 None:intergenic 50.0%
ATTGGTATCAGGGGCTTGAC+CGG + Chr3:71728777-71728796 MsG0380015550.01.T01:intron 50.0%
CACCAAGGCTGCTCCATAAA+AGG - Chr3:71727943-71727962 None:intergenic 50.0%
CATAAATTGGCCATGGCGGT+AGG - Chr3:71725552-71725571 None:intergenic 50.0%
CCAATTAGATGTTGCGAGGC+AGG - Chr3:71727788-71727807 None:intergenic 50.0%
CCACTGCCTTGAATCCTAAG+AGG + Chr3:71728438-71728457 MsG0380015550.01.T01:intron 50.0%
CCGACATGATATCGAGATGG+TGG - Chr3:71727839-71727858 None:intergenic 50.0%
CCTCCTTTGAATGGTCCTCA+AGG + Chr3:71727973-71727992 MsG0380015550.01.T01:intron 50.0%
CCTCTTAGGATTCAAGGCAG+TGG - Chr3:71728441-71728460 None:intergenic 50.0%
CCTGCCTCGCAACATCTAAT+TGG + Chr3:71727785-71727804 MsG0380015550.01.T01:intron 50.0%
CCTTGAGGACCATTCAAAGG+AGG - Chr3:71727976-71727995 None:intergenic 50.0%
CTCTACCACAAGCTCTACTG+CGG - Chr3:71728520-71728539 None:intergenic 50.0%
CTCTACTGCGGGAATGAAGT+AGG - Chr3:71728508-71728527 None:intergenic 50.0%
GAACTCAGAAGATTGGGGAC+TGG + Chr3:71728993-71729012 MsG0380015550.01.T01:intron 50.0%
GAAGGATGGTGAGGATGCAA+AGG - Chr3:71727698-71727717 None:intergenic 50.0%
GAATAGATGGGACGAGTCTC+TGG - Chr3:71727907-71727926 None:intergenic 50.0%
GACATGTGAAGAAGGGGCAA+AGG - Chr3:71727660-71727679 None:intergenic 50.0%
GAGAAGAATCCCCCCAACAA+TGG - Chr3:71726628-71726647 None:intergenic 50.0%
GAGTCACTAGTTGGGTAGAG+GGG + Chr3:71724637-71724656 MsG0380015550.01.T01:intron 50.0%
GATAGGAGTAGGACTCGAGT+GGG - Chr3:71728212-71728231 None:intergenic 50.0%
GATTGAAGGGAAGGATGGTG+AGG - Chr3:71727707-71727726 None:intergenic 50.0%
GCATGCTGCAGAAATGTGAG+TGG - Chr3:71728290-71728309 None:intergenic 50.0%
GCCGTTTCGACGTCATTTCA+AGG + Chr3:71728471-71728490 MsG0380015550.01.T01:intron 50.0%
GGATGTGCCATCACTCTTGT+GGG + Chr3:71730490-71730509 MsG0380015550.01.T01:CDS 50.0%
GGTTTCTTAGGCTGTACCCT+TGG + Chr3:71725859-71725878 MsG0380015550.01.T01:intron 50.0%
GTAGCGATTGAAGGGAAGGA+TGG - Chr3:71727712-71727731 None:intergenic 50.0%
GTTGGGAGGTAGCGATTGAA+GGG - Chr3:71727720-71727739 None:intergenic 50.0%
TAGTGCAATTGCACCCTCAC+TGG - Chr3:71728888-71728907 None:intergenic 50.0%
TCAATCTCGTCCCTTCGAAG+TGG + Chr3:71725040-71725059 MsG0380015550.01.T01:intron 50.0%
TCATTCACACCTGCAACCAC+CGG + Chr3:71726456-71726475 MsG0380015550.01.T01:CDS 50.0%
TCCTGGAACTGGTGGTTGTT+GGG - Chr3:71730551-71730570 None:intergenic 50.0%
TCTACCACAAGCTCTACTGC+GGG - Chr3:71728519-71728538 None:intergenic 50.0%
TGCTGCAGAAATGTGAGTGG+GGG - Chr3:71728287-71728306 None:intergenic 50.0%
TGGATGTGCCATCACTCTTG+TGG + Chr3:71730489-71730508 MsG0380015550.01.T01:CDS 50.0%
TGTGAGTGGGGGAAGTTAGA+AGG - Chr3:71728276-71728295 None:intergenic 50.0%
TGTTGGGAGGTAGCGATTGA+AGG - Chr3:71727721-71727740 None:intergenic 50.0%
TTCAGGGTTTCCAGGTTCAG+CGG + Chr3:71728851-71728870 MsG0380015550.01.T01:intron 50.0%
TTCCTGGAACTGGTGGTTGT+TGG - Chr3:71730552-71730571 None:intergenic 50.0%
! CAGATTTTTGCCTACCGCCA+TGG + Chr3:71725539-71725558 MsG0380015550.01.T01:intron 50.0%
! CTCCCTGCCATGTTACTTGA+AGG + Chr3:71729965-71729984 MsG0380015550.01.T01:CDS 50.0%
! CTTTTATGGAGCAGCCTTGG+TGG + Chr3:71727941-71727960 MsG0380015550.01.T01:intron 50.0%
! GGATTTTGTGCGGCCTTACT+TGG + Chr3:71726681-71726700 MsG0380015550.01.T01:CDS 50.0%
!! ATGGTGGGATGCCACTTTGA+CGG - Chr3:71727823-71727842 None:intergenic 50.0%
!! CTTTGAACTGGTGCCGTCTA+GGG + Chr3:71727549-71727568 MsG0380015550.01.T01:intron 50.0%
!! GCATGTTGGTTCCACTTCGA+AGG - Chr3:71725054-71725073 None:intergenic 50.0%
!! GGGAAAGGGGTATTTAAGGC+AGG + Chr3:71727393-71727412 MsG0380015550.01.T01:intron 50.0%
!! GTGGCGAGTTTGTTAAGAGG+GGG - Chr3:71728243-71728262 None:intergenic 50.0%
!! TCTTTGAACTGGTGCCGTCT+AGG + Chr3:71727548-71727567 MsG0380015550.01.T01:intron 50.0%
!! TGAAAGACGGTGTCGCCATA+TGG + Chr3:71725570-71725589 MsG0380015550.01.T01:intron 50.0%
!!! GTCGCCATATGGCGGATTTT+TGG + Chr3:71725581-71725600 MsG0380015550.01.T01:intron 50.0%
!!! TCGCAAGCCACTTTTGTGAG+AGG - Chr3:71727167-71727186 None:intergenic 50.0%
AAGGACAGCCTTCCATACCG+TGG - Chr3:71727315-71727334 None:intergenic 55.0%
ACTAGTTGGGTAGAGGGGGA+GGG + Chr3:71724642-71724661 MsG0380015550.01.T01:intron 55.0%
AGAAGGCCCAATAGAACCCG+TGG + Chr3:71727219-71727238 MsG0380015550.01.T01:intron 55.0%
AGCGACTCCATCTTACTCCG+AGG - Chr3:71730586-71730605 None:intergenic 55.0%
AGGACAGCCTTCCATACCGT+GGG - Chr3:71727314-71727333 None:intergenic 55.0%
AGGTGGCAGTTGGGTAGCAT+TGG + Chr3:71727353-71727372 MsG0380015550.01.T01:intron 55.0%
ATTGGACTTGGGAGTGGGGA+AGG + Chr3:71728668-71728687 MsG0380015550.01.T01:intron 55.0%
CACCAGTTCCAGGAACTCCT+CGG + Chr3:71730557-71730576 MsG0380015550.01.T01:CDS 55.0%
CATTCCCGCAGTAGAGCTTG+TGG + Chr3:71728512-71728531 MsG0380015550.01.T01:intron 55.0%
CGACTCCATCTTACTCCGAG+GGG - Chr3:71730584-71730603 None:intergenic 55.0%
CGGCATTCCTCATCCCTCTT+AGG - Chr3:71728455-71728474 None:intergenic 55.0%
CTGTTGACCCTGAAGATCGC+TGG + Chr3:71726334-71726353 MsG0380015550.01.T01:CDS 55.0%
GCGACTCCATCTTACTCCGA+GGG - Chr3:71730585-71730604 None:intergenic 55.0%
GGACCATTCAAAGGAGGACC+AGG - Chr3:71727970-71727989 None:intergenic 55.0%
GGACTCGAGTGGGGATTCAT+TGG - Chr3:71728202-71728221 None:intergenic 55.0%
GGAGGTAGCGATTGAAGGGA+AGG - Chr3:71727716-71727735 None:intergenic 55.0%
GGTGCTTCCAATGCCAGTGA+GGG + Chr3:71728872-71728891 MsG0380015550.01.T01:intron 55.0%
TCCCAACAACCACCAGTTCC+AGG + Chr3:71730547-71730566 MsG0380015550.01.T01:CDS 55.0%
TGAACCTTACCGGTGGTTGC+AGG - Chr3:71726468-71726487 None:intergenic 55.0%
TGCGAGGCAGGGGAATAGAT+AGG - Chr3:71727776-71727795 None:intergenic 55.0%
TGCGGCCTTACTTGGCTGTT+TGG + Chr3:71726689-71726708 MsG0380015550.01.T01:CDS 55.0%
TGGGACGAGTCTCTGGACAA+TGG - Chr3:71727900-71727919 None:intergenic 55.0%
TTATGGAGCAGCCTTGGTGG+CGG + Chr3:71727944-71727963 MsG0380015550.01.T01:intron 55.0%
! CGCCTTTTATGGAGCAGCCT+TGG + Chr3:71727938-71727957 MsG0380015550.01.T01:intron 55.0%
! GGCAGTTGGGTAGCATTGGA+GGG + Chr3:71727357-71727376 MsG0380015550.01.T01:intron 55.0%
! TGGCAGTTGGGTAGCATTGG+AGG + Chr3:71727356-71727375 MsG0380015550.01.T01:intron 55.0%
!! AAGACGGTGTCGCCATATGG+CGG + Chr3:71725573-71725592 MsG0380015550.01.T01:intron 55.0%
!! ATTGGAAGCACCGCTGAACC+TGG - Chr3:71728864-71728883 None:intergenic 55.0%
!! CAATGGCGGATAGTGGACCA+TGG - Chr3:71725614-71725633 None:intergenic 55.0%
!! GGGATGCCACTTTGACGGTA+TGG - Chr3:71727818-71727837 None:intergenic 55.0%
ATCTTACTCCGAGGGGTCCG+AGG - Chr3:71730577-71730596 None:intergenic 60.0%
CACACCTGCAACCACCGGTA+AGG + Chr3:71726461-71726480 MsG0380015550.01.T01:intron 60.0%
CACTAGTTGGGTAGAGGGGG+AGG + Chr3:71724641-71724660 MsG0380015550.01.T01:intron 60.0%
CAGATCTGTCATGGCGGTGG+CGG + Chr3:71728810-71728829 MsG0380015550.01.T01:intron 60.0%
CGAGGAGTTCCTGGAACTGG+TGG - Chr3:71730559-71730578 None:intergenic 60.0%
CGGCCTGGTCCTCCTTTGAA+TGG + Chr3:71727964-71727983 MsG0380015550.01.T01:intron 60.0%
CGGTGCTTCCAATGCCAGTG+AGG + Chr3:71728871-71728890 MsG0380015550.01.T01:intron 60.0%
CTCGGACGGAGCTTTGCTCT+GGG - Chr3:71728133-71728152 None:intergenic 60.0%
GTCCGAGGAGTTCCTGGAAC+TGG - Chr3:71730562-71730581 None:intergenic 60.0%
TCGGACCCCTCGGAGTAAGA+TGG + Chr3:71730576-71730595 MsG0380015550.01.T01:CDS 60.0%
TCGGACGGAGCTTTGCTCTG+GGG - Chr3:71728132-71728151 None:intergenic 60.0%
TCTGCCACCGTAATCCGCCA+TGG - Chr3:71725523-71725542 None:intergenic 60.0%
!! AACTGGTGCCGTCTAGGGCA+AGG + Chr3:71727554-71727573 MsG0380015550.01.T01:intron 60.0%
!! GGCAGGGAGCACCAAGATCA+TGG - Chr3:71729954-71729973 None:intergenic 60.0%
!! TCGTCCATGGCGGATTACGG+TGG + Chr3:71725516-71725535 MsG0380015550.01.T01:intron 60.0%
!! TGGCGGATAGTGGACCATGG+TGG - Chr3:71725611-71725630 None:intergenic 60.0%
CAGGAACTCCTCGGACCCCT+CGG + Chr3:71730566-71730585 MsG0380015550.01.T01:CDS 65.0%
CATCCTAGGTGCCTCGCCAG+TGG - Chr3:71729100-71729119 None:intergenic 65.0%
CCAGAGCAAAGCTCCGTCCG+AGG + Chr3:71728131-71728150 MsG0380015550.01.T01:intron 65.0%
CCTCGGACGGAGCTTTGCTC+TGG - Chr3:71728134-71728153 None:intergenic 65.0%
CGAGGGGTCCGAGGAGTTCC+TGG - Chr3:71730568-71730587 None:intergenic 70.0%
! GGACCACTGGCGAGGCACCT+AGG + Chr3:71729094-71729113 MsG0380015550.01.T01:intron 70.0%
GGAGGACCAGGCCGCCACCA+AGG - Chr3:71727958-71727977 None:intergenic 75.0%
!! GAGCAGCCTTGGTGGCGGCC+TGG + Chr3:71727949-71727968 MsG0380015550.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 71724043 71731056 71724043 ID=MsG0380015550.01;Name=MsG0380015550.01
Chr3 mRNA 71724043 71731056 71724043 ID=MsG0380015550.01.T01;Parent=MsG0380015550.01;Name=MsG0380015550.01.T01;_AED=0.38;_eAED=0.46;_QI=179|0.33|0.28|1|0.33|0.28|7|414|429
Chr3 exon 71724043 71724335 71724043 ID=MsG0380015550.01.T01:exon:15903;Parent=MsG0380015550.01.T01
Chr3 exon 71726073 71726118 71726073 ID=MsG0380015550.01.T01:exon:15904;Parent=MsG0380015550.01.T01
Chr3 exon 71726193 71726477 71726193 ID=MsG0380015550.01.T01:exon:15905;Parent=MsG0380015550.01.T01
Chr3 exon 71726562 71726802 71726562 ID=MsG0380015550.01.T01:exon:15906;Parent=MsG0380015550.01.T01
Chr3 exon 71727074 71727190 71727074 ID=MsG0380015550.01.T01:exon:15907;Parent=MsG0380015550.01.T01
Chr3 exon 71729880 71730147 71729880 ID=MsG0380015550.01.T01:exon:15908;Parent=MsG0380015550.01.T01
Chr3 exon 71730424 71731056 71730424 ID=MsG0380015550.01.T01:exon:15909;Parent=MsG0380015550.01.T01
Chr3 five_prime_UTR 71724043 71724221 71724043 ID=MsG0380015550.01.T01:five_prime_utr;Parent=MsG0380015550.01.T01
Chr3 CDS 71724222 71724335 71724222 ID=MsG0380015550.01.T01:cds;Parent=MsG0380015550.01.T01
Chr3 CDS 71726073 71726118 71726073 ID=MsG0380015550.01.T01:cds;Parent=MsG0380015550.01.T01
Chr3 CDS 71726193 71726477 71726193 ID=MsG0380015550.01.T01:cds;Parent=MsG0380015550.01.T01
Chr3 CDS 71726562 71726802 71726562 ID=MsG0380015550.01.T01:cds;Parent=MsG0380015550.01.T01
Chr3 CDS 71727074 71727190 71727074 ID=MsG0380015550.01.T01:cds;Parent=MsG0380015550.01.T01
Chr3 CDS 71729880 71730147 71729880 ID=MsG0380015550.01.T01:cds;Parent=MsG0380015550.01.T01
Chr3 CDS 71730424 71730642 71730424 ID=MsG0380015550.01.T01:cds;Parent=MsG0380015550.01.T01
Chr3 three_prime_UTR 71730643 71731056 71730643 ID=MsG0380015550.01.T01:three_prime_utr;Parent=MsG0380015550.01.T01
Gene Sequence

>MsG0380015550.01.T01

ATGGAAGAAAACTCTGTTGTTTTCCAATGGAGCGTAATCAGATCTCTCTTGTGTATTCTTCAATGGTGGACTTTCAATGTCACCGTTATCATCGTTAACAAGTGGATCTTCCAGCGAAGAAAAGGTTTATCAACCTTTATAACTTCCACAATCCACATTGCAAGTATTTTATTTTGTTTTGTTTTCTATTTGCAGAAATTGGATTTCAAGTTTCCCCTATCAGTATCATGTGTCCACTTTATCTGCTCAGCCATTGGAGCATATATAGTAATTAAGGTGCTGAAGCTTAAACCACTGATAACTGTTGACCCTGAAGATCGCTGGAAAAGAATCTTTCCGATGTCATTTGTGTTCTGCATTAACATAGTGCTGGGGAATGTGAGTTTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACACCTGCAACCACCGTTGTTTTGCAATGGCTAGTGTGGAGGAAATATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGGGGGATTCTTCTCACATCTGTAACTGAGATGAGCTTTAATATGTTTGGATTTTGTGCGGCCTTACTTGGCTGTTTGGCTACATCTACAAAGACTATCCTTGCAGAATCTCTTTTGCATGGATACAAATTTGACAGGTATCATCTTTATGCTAGCAATTTCTATTGTTTCAAGCCAGCTAATGTTATCGCAAATCAGTACCTTGCAGGCATAACAATCAAATGTATTTTAAGATATGATTCAAAATTTACTGAACTTTACCTCTCACAAAAGTGGCTTGCGAATGGTACACAAACTAATATTTCTTTTCATGTTATCTTTAGCATAAACACGGTTTATTACATGGCACCTTATGCGACCATGATCTTGGTGCTCCCTGCCATGTTACTTGAAGGCAATGGAGTTCTTGAATGGCTTAATACTCATCCATATCCTTGGTCGGCTCTCATCATTATTTTTAGTTCTGGGGTGCTGGCTTTCTGTCTTAACTTCTCCATTTTTTATGTGATCCACTCCACTACTGCTGTAACATTTAACGTTGCTGGGAACCTTAAGGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAACCCAATCTCATATTTAAATGCTGTTGGATGTGCCATCACTCTTGTGGGTTGTACATTCTATGGTTATGTTAGACACTTGCTCTCCCAACAACCACCAGTTCCAGGAACTCCTCGGACCCCTCGGAGTAAGATGGAGTCGCTTCCACTTGTAAATGATAAATTAGAAAATAAGTTCTAA
Protein sequence

>MsG0380015550.01.T01

MEENSVVFQWSVIRSLLCILQWWTFNVTVIIVNKWIFQRRKGLSTFITSTIHIASILFCFVFYLQKLDFKFPLSVSCVHFICSAIGAYIVIKVLKLKPLITVDPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTEMSFNMFGFCAALLGCLATSTKTILAESLLHGYKFDRYHLYASNFYCFKPANVIANQYLAGITIKCILRYDSKFTELYLSQKWLANGTQTNISFHVIFSINTVYYMAPYATMILVLPAMLLEGNGVLEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCAITLVGCTFYGYVRHLLSQQPPVPGTPRTPRSKMESLPLVNDKLENKF*