Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015558.01.T01 | AFK39842.1 | 64.208 | 366 | 46 | 9 | 1 | 284 | 1 | 363 | 9.63E-145 | 421 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015558.01.T01 | Q9SUF1 | 44.944 | 356 | 103 | 6 | 13 | 283 | 8 | 355 | 2.09E-95 | 289 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015558.01.T01 | I3SHV0 | 64.208 | 366 | 46 | 9 | 1 | 284 | 1 | 363 | 4.60e-145 | 421 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0380015558.01 | MsG0480022610.01 | 0.816835 | 4.505188e-52 | 3.227223e-49 |
MsG0380015558.01 | MsG0780038922.01 | 0.809856 | 1.538421e-50 | 9.133214e-48 |
MsG0280006853.01 | MsG0380015558.01 | 0.808811 | 2.578330e-50 | 1.488631e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015558.01.T01 | MTR_3g072530 | 92.949 | 156 | 11 | 0 | 129 | 284 | 208 | 363 | 7.65e-104 | 307 |
MsG0380015558.01.T01 | MTR_3g072530 | 81.208 | 149 | 4 | 2 | 1 | 128 | 1 | 146 | 2.60e-71 | 224 |
MsG0380015558.01.T01 | MTR_1g068630 | 38.166 | 338 | 128 | 4 | 11 | 268 | 9 | 345 | 2.21e-76 | 237 |
MsG0380015558.01.T01 | MTR_3g072530 | 81.208 | 149 | 4 | 2 | 1 | 128 | 1 | 146 | 5.95e-72 | 224 |
MsG0380015558.01.T01 | MTR_3g072530 | 90.909 | 55 | 5 | 0 | 129 | 183 | 242 | 296 | 1.75e-28 | 111 |
MsG0380015558.01.T01 | MTR_3g072560 | 65.161 | 155 | 50 | 2 | 129 | 283 | 210 | 360 | 3.39e-67 | 214 |
MsG0380015558.01.T01 | MTR_3g072560 | 59.259 | 135 | 34 | 1 | 15 | 128 | 16 | 150 | 7.26e-43 | 151 |
MsG0380015558.01.T01 | MTR_0096s0100 | 37.047 | 359 | 129 | 8 | 8 | 279 | 5 | 353 | 4.53e-62 | 200 |
MsG0380015558.01.T01 | MTR_3g072500 | 54.248 | 153 | 63 | 2 | 129 | 281 | 113 | 258 | 8.44e-53 | 174 |
MsG0380015558.01.T01 | MTR_3g072500 | 54.248 | 153 | 63 | 2 | 129 | 281 | 216 | 361 | 1.29e-51 | 174 |
MsG0380015558.01.T01 | MTR_3g072500 | 39.130 | 161 | 70 | 2 | 5 | 137 | 8 | 168 | 2.03e-30 | 118 |
MsG0380015558.01.T01 | MTR_1g074160 | 30.887 | 327 | 145 | 4 | 13 | 259 | 9 | 334 | 5.33e-48 | 163 |
MsG0380015558.01.T01 | MTR_3g072520 | 54.140 | 157 | 67 | 3 | 129 | 281 | 205 | 360 | 1.87e-47 | 163 |
MsG0380015558.01.T01 | MTR_3g072520 | 47.143 | 140 | 53 | 1 | 10 | 128 | 2 | 141 | 9.09e-33 | 124 |
MsG0380015558.01.T01 | MTR_1g030580 | 53.416 | 161 | 61 | 4 | 129 | 284 | 210 | 361 | 2.53e-47 | 162 |
MsG0380015558.01.T01 | MTR_1g030580 | 43.791 | 153 | 58 | 2 | 13 | 137 | 12 | 164 | 7.11e-33 | 124 |
MsG0380015558.01.T01 | MTR_1g074020 | 31.193 | 327 | 144 | 5 | 13 | 259 | 9 | 334 | 4.55e-46 | 158 |
MsG0380015558.01.T01 | MTR_1g074070 | 30.982 | 326 | 144 | 5 | 14 | 259 | 13 | 337 | 8.11e-46 | 157 |
MsG0380015558.01.T01 | MTR_1g074120 | 29.377 | 337 | 157 | 4 | 18 | 274 | 17 | 352 | 8.52e-45 | 155 |
MsG0380015558.01.T01 | MTR_7g100050 | 48.276 | 145 | 74 | 1 | 129 | 273 | 207 | 350 | 2.39e-44 | 154 |
MsG0380015558.01.T01 | MTR_7g100050 | 39.850 | 133 | 59 | 1 | 18 | 129 | 14 | 146 | 3.77e-28 | 111 |
MsG0380015558.01.T01 | MTR_1g073990 | 30.960 | 323 | 141 | 5 | 18 | 259 | 17 | 338 | 1.35e-42 | 149 |
MsG0380015558.01.T01 | MTR_1g030600 | 49.342 | 152 | 75 | 2 | 129 | 280 | 214 | 363 | 1.34e-40 | 145 |
MsG0380015558.01.T01 | MTR_1g030600 | 53.435 | 131 | 40 | 1 | 19 | 128 | 20 | 150 | 1.04e-37 | 137 |
MsG0380015558.01.T01 | MTR_1g070175 | 28.736 | 348 | 168 | 6 | 14 | 283 | 13 | 358 | 4.41e-40 | 143 |
MsG0380015558.01.T01 | MTR_1g051120 | 29.573 | 328 | 148 | 5 | 14 | 259 | 13 | 339 | 5.62e-40 | 142 |
MsG0380015558.01.T01 | MTR_1g068720 | 32.000 | 250 | 137 | 7 | 14 | 261 | 11 | 229 | 1.78e-38 | 135 |
MsG0380015558.01.T01 | MTR_8g041390 | 49.231 | 130 | 61 | 2 | 138 | 264 | 221 | 348 | 7.09e-37 | 135 |
MsG0380015558.01.T01 | MTR_8g041390 | 38.129 | 139 | 65 | 1 | 11 | 128 | 7 | 145 | 1.27e-27 | 110 |
MsG0380015558.01.T01 | MTR_1g052205 | 44.304 | 158 | 69 | 5 | 129 | 279 | 86 | 231 | 8.59e-37 | 131 |
MsG0380015558.01.T01 | MTR_2g016710 | 27.941 | 340 | 163 | 5 | 18 | 277 | 9 | 346 | 3.02e-35 | 130 |
MsG0380015558.01.T01 | MTR_3g012420 | 46.212 | 132 | 64 | 2 | 138 | 264 | 222 | 351 | 1.11e-34 | 129 |
MsG0380015558.01.T01 | MTR_3g012420 | 42.647 | 136 | 57 | 1 | 14 | 128 | 14 | 149 | 1.46e-27 | 110 |
MsG0380015558.01.T01 | MTR_5g021160 | 28.698 | 338 | 156 | 7 | 14 | 266 | 4 | 341 | 8.57e-33 | 124 |
MsG0380015558.01.T01 | MTR_8g006010 | 27.326 | 344 | 166 | 5 | 18 | 279 | 11 | 352 | 2.86e-32 | 122 |
MsG0380015558.01.T01 | MTR_3g072500 | 39.130 | 161 | 70 | 2 | 5 | 137 | 8 | 168 | 8.90e-32 | 117 |
MsG0380015558.01.T01 | MTR_3g072500 | 39.130 | 161 | 70 | 2 | 5 | 137 | 8 | 168 | 2.26e-31 | 118 |
MsG0380015558.01.T01 | MTR_3g090550 | 28.614 | 332 | 147 | 9 | 34 | 284 | 23 | 345 | 5.70e-30 | 115 |
MsG0380015558.01.T01 | MTR_8g092650 | 39.007 | 141 | 78 | 2 | 132 | 272 | 130 | 262 | 2.35e-28 | 110 |
MsG0380015558.01.T01 | MTR_5g034990 | 27.864 | 323 | 153 | 5 | 11 | 255 | 8 | 328 | 4.23e-28 | 110 |
MsG0380015558.01.T01 | MTR_4g094340 | 37.415 | 147 | 88 | 3 | 135 | 281 | 145 | 287 | 1.10e-27 | 108 |
MsG0380015558.01.T01 | MTR_8g092650 | 39.007 | 141 | 78 | 2 | 132 | 272 | 208 | 340 | 1.23e-27 | 109 |
MsG0380015558.01.T01 | MTR_8g092650 | 32.609 | 138 | 72 | 3 | 13 | 129 | 1 | 138 | 4.23e-12 | 65.9 |
MsG0380015558.01.T01 | MTR_4g094340 | 37.415 | 147 | 88 | 3 | 135 | 281 | 211 | 353 | 1.92e-27 | 109 |
MsG0380015558.01.T01 | MTR_4g094340 | 33.813 | 139 | 72 | 1 | 10 | 128 | 2 | 140 | 1.63e-12 | 67.4 |
MsG0380015558.01.T01 | MTR_3g095460 | 39.231 | 130 | 77 | 1 | 132 | 261 | 205 | 332 | 2.30e-27 | 108 |
MsG0380015558.01.T01 | MTR_3g095460 | 33.333 | 138 | 71 | 3 | 13 | 129 | 1 | 138 | 6.43e-15 | 74.3 |
MsG0380015558.01.T01 | MTR_4g094340 | 37.415 | 147 | 88 | 3 | 135 | 281 | 229 | 371 | 3.44e-27 | 108 |
MsG0380015558.01.T01 | MTR_4g094340 | 33.813 | 139 | 72 | 1 | 10 | 128 | 20 | 158 | 1.61e-12 | 67.4 |
MsG0380015558.01.T01 | MTR_8g006090 | 26.761 | 355 | 178 | 7 | 10 | 283 | 4 | 357 | 3.81e-27 | 108 |
MsG0380015558.01.T01 | MTR_2g027030 | 39.231 | 130 | 77 | 1 | 133 | 262 | 212 | 339 | 5.31e-27 | 108 |
MsG0380015558.01.T01 | MTR_2g027030 | 30.657 | 137 | 74 | 1 | 13 | 128 | 8 | 144 | 6.23e-11 | 62.8 |
MsG0380015558.01.T01 | MTR_3g095420 | 35.338 | 133 | 84 | 1 | 132 | 264 | 210 | 340 | 1.07e-26 | 107 |
MsG0380015558.01.T01 | MTR_3g095420 | 35.252 | 139 | 67 | 2 | 13 | 128 | 3 | 141 | 1.33e-19 | 87.8 |
MsG0380015558.01.T01 | MTR_3g112480 | 46.457 | 127 | 47 | 2 | 23 | 128 | 26 | 152 | 8.46e-26 | 105 |
MsG0380015558.01.T01 | MTR_3g112480 | 34.783 | 138 | 86 | 2 | 132 | 267 | 230 | 365 | 6.08e-21 | 92.0 |
MsG0380015558.01.T01 | MTR_1g023180 | 45.038 | 131 | 51 | 2 | 19 | 128 | 23 | 153 | 1.48e-25 | 104 |
MsG0380015558.01.T01 | MTR_1g023180 | 35.484 | 124 | 78 | 1 | 132 | 255 | 236 | 357 | 8.36e-20 | 88.6 |
MsG0380015558.01.T01 | MTR_2g065550 | 26.480 | 321 | 151 | 4 | 18 | 255 | 11 | 329 | 2.23e-25 | 103 |
MsG0380015558.01.T01 | MTR_3g095450 | 39.516 | 124 | 73 | 1 | 132 | 255 | 208 | 329 | 1.45e-24 | 101 |
MsG0380015558.01.T01 | MTR_3g095450 | 34.074 | 135 | 66 | 2 | 13 | 124 | 1 | 135 | 3.51e-16 | 78.2 |
MsG0380015558.01.T01 | MTR_2g007970 | 36.842 | 152 | 90 | 2 | 133 | 284 | 212 | 357 | 1.64e-24 | 102 |
MsG0380015558.01.T01 | MTR_2g007970 | 33.083 | 133 | 68 | 1 | 18 | 129 | 13 | 145 | 3.90e-12 | 66.2 |
MsG0380015558.01.T01 | MTR_2g102340 | 36.585 | 123 | 77 | 1 | 133 | 255 | 209 | 330 | 1.95e-24 | 101 |
MsG0380015558.01.T01 | MTR_6g036450 | 37.097 | 124 | 76 | 1 | 132 | 255 | 215 | 336 | 2.11e-24 | 101 |
MsG0380015558.01.T01 | MTR_6g036450 | 30.137 | 146 | 82 | 1 | 3 | 128 | 2 | 147 | 4.13e-18 | 83.6 |
MsG0380015558.01.T01 | MTR_6g007743 | 25.879 | 313 | 150 | 5 | 34 | 267 | 30 | 339 | 2.22e-24 | 101 |
MsG0380015558.01.T01 | MTR_0103s0090 | 28.231 | 294 | 128 | 6 | 43 | 255 | 37 | 328 | 4.42e-24 | 100 |
MsG0380015558.01.T01 | MTR_2g007990 | 34.868 | 152 | 89 | 2 | 133 | 276 | 216 | 365 | 4.44e-24 | 100 |
MsG0380015558.01.T01 | MTR_2g007990 | 30.556 | 144 | 79 | 1 | 7 | 129 | 5 | 148 | 2.07e-14 | 73.2 |
MsG0380015558.01.T01 | MTR_2g007960 | 35.606 | 132 | 83 | 1 | 133 | 264 | 218 | 347 | 1.21e-23 | 99.4 |
MsG0380015558.01.T01 | MTR_4g106720 | 26.280 | 293 | 136 | 6 | 43 | 255 | 38 | 330 | 2.76e-23 | 97.8 |
MsG0380015558.01.T01 | MTR_8g006120 | 33.803 | 142 | 92 | 1 | 134 | 275 | 210 | 349 | 3.38e-23 | 97.8 |
MsG0380015558.01.T01 | MTR_2g007260 | 35.556 | 135 | 85 | 1 | 133 | 267 | 219 | 351 | 3.57e-23 | 98.2 |
MsG0380015558.01.T01 | MTR_5g034930 | 26.590 | 346 | 170 | 9 | 13 | 275 | 2 | 346 | 3.77e-23 | 97.4 |
MsG0380015558.01.T01 | MTR_6g081840 | 32.026 | 153 | 102 | 1 | 132 | 284 | 211 | 361 | 5.50e-23 | 97.4 |
MsG0380015558.01.T01 | MTR_6g081840 | 38.621 | 145 | 61 | 3 | 26 | 142 | 19 | 163 | 3.14e-17 | 80.9 |
MsG0380015558.01.T01 | MTR_5g034980 | 27.385 | 325 | 154 | 8 | 13 | 255 | 1 | 325 | 2.32e-22 | 95.5 |
MsG0380015558.01.T01 | MTR_0103s0090 | 28.270 | 237 | 108 | 3 | 79 | 255 | 3 | 237 | 4.85e-22 | 93.2 |
MsG0380015558.01.T01 | MTR_5g089390 | 26.036 | 338 | 159 | 10 | 25 | 283 | 22 | 347 | 8.86e-22 | 93.6 |
MsG0380015558.01.T01 | MTR_1g074160 | 26.000 | 250 | 104 | 4 | 13 | 182 | 9 | 257 | 1.43e-21 | 91.7 |
MsG0380015558.01.T01 | MTR_3g112480 | 34.783 | 138 | 86 | 2 | 132 | 267 | 103 | 238 | 2.68e-21 | 90.9 |
MsG0380015558.01.T01 | MTR_3g112480 | 37.097 | 124 | 76 | 1 | 132 | 255 | 175 | 296 | 3.05e-21 | 92.0 |
MsG0380015558.01.T01 | MTR_3g112480 | 54.545 | 55 | 25 | 0 | 74 | 128 | 43 | 97 | 1.21e-11 | 64.7 |
MsG0380015558.01.T01 | MTR_4g094360 | 28.824 | 170 | 101 | 3 | 133 | 284 | 215 | 382 | 3.52e-21 | 92.8 |
MsG0380015558.01.T01 | MTR_2g016710 | 27.891 | 294 | 134 | 6 | 18 | 233 | 9 | 302 | 3.97e-21 | 91.7 |
MsG0380015558.01.T01 | MTR_4g094360 | 28.824 | 170 | 101 | 3 | 133 | 284 | 168 | 335 | 6.10e-21 | 91.3 |
MsG0380015558.01.T01 | MTR_6g007750 | 25.641 | 312 | 148 | 6 | 38 | 267 | 33 | 342 | 8.58e-21 | 91.3 |
MsG0380015558.01.T01 | MTR_5g021160 | 37.748 | 151 | 66 | 3 | 14 | 136 | 4 | 154 | 1.26e-20 | 89.4 |
MsG0380015558.01.T01 | MTR_8g006050 | 27.304 | 293 | 113 | 8 | 48 | 255 | 25 | 302 | 2.02e-20 | 90.1 |
MsG0380015558.01.T01 | MTR_5g034910 | 32.593 | 135 | 88 | 2 | 132 | 265 | 204 | 336 | 6.05e-20 | 88.6 |
MsG0380015558.01.T01 | MTR_5g034910 | 35.000 | 140 | 63 | 3 | 23 | 134 | 13 | 152 | 4.72e-12 | 65.9 |
MsG0380015558.01.T01 | MTR_4g094362 | 34.146 | 123 | 79 | 1 | 133 | 255 | 214 | 334 | 6.93e-20 | 89.0 |
MsG0380015558.01.T01 | MTR_4g094342 | 36.441 | 118 | 73 | 1 | 133 | 250 | 216 | 331 | 7.28e-20 | 88.6 |
MsG0380015558.01.T01 | MTR_4g129650 | 36.434 | 129 | 74 | 4 | 141 | 266 | 107 | 230 | 4.43e-19 | 84.7 |
MsG0380015558.01.T01 | MTR_4g129650 | 36.434 | 129 | 74 | 4 | 141 | 266 | 214 | 337 | 9.48e-19 | 85.5 |
MsG0380015558.01.T01 | MTR_4g129650 | 33.333 | 135 | 66 | 2 | 18 | 128 | 9 | 143 | 2.46e-15 | 75.5 |
MsG0380015558.01.T01 | MTR_6g007753 | 26.190 | 252 | 126 | 3 | 74 | 267 | 374 | 623 | 1.43e-18 | 85.9 |
MsG0380015558.01.T01 | MTR_6g007753 | 31.618 | 136 | 91 | 1 | 132 | 267 | 166 | 299 | 1.98e-14 | 73.6 |
MsG0380015558.01.T01 | MTR_8g076800 | 41.053 | 95 | 47 | 2 | 131 | 218 | 171 | 263 | 1.54e-18 | 83.6 |
MsG0380015558.01.T01 | MTR_7g111830 | 34.848 | 132 | 65 | 1 | 18 | 128 | 8 | 139 | 1.60e-18 | 85.1 |
MsG0380015558.01.T01 | MTR_7g111830 | 29.921 | 127 | 87 | 1 | 133 | 259 | 212 | 336 | 3.44e-17 | 81.3 |
MsG0380015558.01.T01 | MTR_3g095440 | 37.097 | 124 | 76 | 1 | 132 | 255 | 208 | 329 | 1.63e-18 | 84.7 |
MsG0380015558.01.T01 | MTR_3g095440 | 33.333 | 135 | 67 | 2 | 13 | 124 | 1 | 135 | 8.13e-17 | 79.7 |
MsG0380015558.01.T01 | MTR_6g007747 | 26.688 | 311 | 148 | 5 | 34 | 267 | 30 | 337 | 1.71e-18 | 84.7 |
MsG0380015558.01.T01 | MTR_1g038560 | 30.081 | 123 | 84 | 1 | 133 | 255 | 200 | 320 | 1.50e-17 | 81.6 |
MsG0380015558.01.T01 | MTR_1g038560 | 34.109 | 129 | 66 | 1 | 18 | 127 | 4 | 132 | 1.67e-15 | 75.9 |
MsG0380015558.01.T01 | MTR_1g114210 | 31.707 | 123 | 82 | 1 | 133 | 255 | 208 | 328 | 3.09e-17 | 80.9 |
MsG0380015558.01.T01 | MTR_1g114210 | 29.927 | 137 | 77 | 1 | 11 | 128 | 5 | 141 | 6.50e-13 | 68.6 |
MsG0380015558.01.T01 | MTR_1g014510 | 29.771 | 131 | 90 | 1 | 129 | 259 | 208 | 336 | 3.17e-17 | 81.6 |
MsG0380015558.01.T01 | MTR_5g025340 | 40.000 | 120 | 51 | 3 | 30 | 128 | 23 | 142 | 3.32e-17 | 81.3 |
MsG0380015558.01.T01 | MTR_5g021160 | 32.609 | 138 | 88 | 2 | 132 | 266 | 123 | 258 | 4.73e-17 | 79.7 |
MsG0380015558.01.T01 | MTR_8g006090 | 25.902 | 305 | 145 | 6 | 10 | 233 | 4 | 308 | 4.95e-17 | 79.7 |
MsG0380015558.01.T01 | MTR_8g006090 | 29.333 | 150 | 101 | 3 | 135 | 283 | 132 | 277 | 5.10e-17 | 79.3 |
MsG0380015558.01.T01 | MTR_4g094352 | 35.938 | 128 | 80 | 1 | 133 | 260 | 218 | 343 | 5.56e-17 | 80.5 |
MsG0380015558.01.T01 | MTR_6g007470 | 46.753 | 77 | 39 | 1 | 130 | 206 | 110 | 184 | 5.73e-17 | 78.2 |
MsG0380015558.01.T01 | MTR_3g095440 | 33.333 | 135 | 67 | 2 | 13 | 124 | 1 | 135 | 6.06e-17 | 79.0 |
MsG0380015558.01.T01 | MTR_1g030400 | 26.490 | 151 | 102 | 3 | 133 | 276 | 211 | 359 | 4.88e-16 | 77.8 |
MsG0380015558.01.T01 | MTR_1g030400 | 26.378 | 254 | 145 | 8 | 26 | 247 | 16 | 259 | 2.40e-12 | 67.0 |
MsG0380015558.01.T01 | MTR_6g007757 | 27.815 | 302 | 135 | 6 | 34 | 255 | 30 | 328 | 8.03e-16 | 77.0 |
MsG0380015558.01.T01 | MTR_1g051120 | 29.412 | 136 | 75 | 1 | 14 | 128 | 13 | 148 | 1.71e-15 | 73.9 |
MsG0380015558.01.T01 | MTR_8g072350 | 25.287 | 348 | 163 | 12 | 29 | 281 | 20 | 365 | 2.40e-15 | 75.9 |
MsG0380015558.01.T01 | MTR_1g051120 | 29.412 | 136 | 75 | 1 | 14 | 128 | 13 | 148 | 2.42e-15 | 74.7 |
MsG0380015558.01.T01 | MTR_5g025370 | 37.008 | 127 | 59 | 3 | 23 | 128 | 16 | 142 | 4.95e-15 | 74.7 |
MsG0380015558.01.T01 | MTR_5g025330 | 35.714 | 140 | 67 | 4 | 10 | 128 | 4 | 141 | 8.18e-15 | 74.7 |
MsG0380015558.01.T01 | MTR_6g007740 | 24.012 | 329 | 169 | 5 | 18 | 267 | 13 | 339 | 1.85e-14 | 73.6 |
MsG0380015558.01.T01 | MTR_5g025400 | 31.250 | 208 | 112 | 6 | 25 | 210 | 19 | 217 | 2.06e-14 | 73.2 |
MsG0380015558.01.T01 | MTR_3g019050 | 27.941 | 136 | 89 | 2 | 132 | 267 | 216 | 342 | 3.77e-14 | 72.4 |
MsG0380015558.01.T01 | MTR_5g025290 | 35.833 | 120 | 56 | 2 | 30 | 128 | 24 | 143 | 1.37e-13 | 70.5 |
MsG0380015558.01.T01 | MTR_5g025290 | 35.833 | 120 | 56 | 2 | 30 | 128 | 52 | 171 | 1.89e-13 | 70.5 |
MsG0380015558.01.T01 | MTR_4g094340 | 33.813 | 139 | 72 | 1 | 10 | 128 | 20 | 158 | 6.97e-13 | 67.0 |
MsG0380015558.01.T01 | MTR_5g012650 | 22.671 | 322 | 161 | 8 | 23 | 259 | 14 | 332 | 8.23e-13 | 68.2 |
MsG0380015558.01.T01 | MTR_4g094340 | 33.813 | 139 | 72 | 1 | 10 | 128 | 20 | 158 | 9.00e-13 | 67.4 |
MsG0380015558.01.T01 | MTR_4g094340 | 33.813 | 139 | 72 | 1 | 10 | 128 | 2 | 140 | 9.27e-13 | 67.4 |
MsG0380015558.01.T01 | MTR_8g006090 | 34.752 | 141 | 70 | 2 | 10 | 128 | 4 | 144 | 2.82e-12 | 66.2 |
MsG0380015558.01.T01 | MTR_5g034970 | 35.433 | 127 | 61 | 2 | 23 | 128 | 13 | 139 | 4.23e-12 | 65.9 |
MsG0380015558.01.T01 | MTR_5g068790 | 24.183 | 153 | 110 | 2 | 132 | 284 | 218 | 364 | 7.10e-12 | 65.5 |
MsG0380015558.01.T01 | MTR_5g069040 | 22.840 | 162 | 113 | 2 | 132 | 283 | 220 | 379 | 8.59e-12 | 65.5 |
MsG0380015558.01.T01 | MTR_5g034980 | 34.532 | 139 | 68 | 3 | 13 | 128 | 1 | 139 | 2.18e-11 | 63.5 |
MsG0380015558.01.T01 | MTR_1g092700 | 46.296 | 54 | 26 | 1 | 202 | 255 | 4 | 54 | 4.27e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015558.01.T01 | AT4G08290 | 44.944 | 356 | 103 | 6 | 13 | 283 | 8 | 355 | 2.13e-96 | 289 |
MsG0380015558.01.T01 | AT2G37460 | 36.337 | 344 | 138 | 4 | 11 | 274 | 8 | 350 | 1.36e-70 | 223 |
MsG0380015558.01.T01 | AT2G40900 | 33.529 | 340 | 146 | 5 | 10 | 271 | 2 | 339 | 2.73e-61 | 199 |
MsG0380015558.01.T01 | AT1G44800 | 35.311 | 354 | 139 | 8 | 10 | 281 | 3 | 348 | 8.87e-60 | 194 |
MsG0380015558.01.T01 | AT2G37450 | 38.676 | 287 | 149 | 6 | 13 | 276 | 4 | 286 | 5.40e-58 | 187 |
MsG0380015558.01.T01 | AT3G56620 | 31.988 | 322 | 138 | 5 | 10 | 252 | 2 | 321 | 3.00e-51 | 172 |
MsG0380015558.01.T01 | AT2G37450 | 50.676 | 148 | 72 | 1 | 129 | 276 | 107 | 253 | 8.84e-48 | 160 |
MsG0380015558.01.T01 | AT4G08290 | 40.234 | 256 | 65 | 6 | 13 | 183 | 8 | 260 | 1.92e-47 | 160 |
MsG0380015558.01.T01 | AT2G37450 | 50.676 | 148 | 72 | 1 | 129 | 276 | 179 | 325 | 3.99e-47 | 160 |
MsG0380015558.01.T01 | AT2G37450 | 51.351 | 111 | 54 | 0 | 13 | 123 | 4 | 114 | 1.69e-29 | 114 |
MsG0380015558.01.T01 | AT1G21890 | 50.968 | 155 | 68 | 3 | 129 | 277 | 213 | 365 | 2.12e-45 | 157 |
MsG0380015558.01.T01 | AT1G21890 | 48.175 | 137 | 50 | 1 | 13 | 128 | 6 | 142 | 9.74e-36 | 132 |
MsG0380015558.01.T01 | AT2G39510 | 43.558 | 163 | 82 | 2 | 122 | 284 | 194 | 346 | 4.88e-41 | 145 |
MsG0380015558.01.T01 | AT2G39510 | 39.394 | 132 | 59 | 1 | 18 | 128 | 8 | 139 | 2.11e-25 | 103 |
MsG0380015558.01.T01 | AT4G08300 | 46.452 | 155 | 73 | 2 | 129 | 283 | 207 | 351 | 3.39e-39 | 141 |
MsG0380015558.01.T01 | AT4G08300 | 43.590 | 156 | 60 | 2 | 10 | 137 | 3 | 158 | 1.44e-36 | 134 |
MsG0380015558.01.T01 | AT5G07050 | 50.400 | 125 | 59 | 2 | 132 | 255 | 221 | 343 | 5.95e-37 | 135 |
MsG0380015558.01.T01 | AT5G07050 | 38.926 | 149 | 68 | 2 | 1 | 128 | 3 | 149 | 4.82e-28 | 111 |
MsG0380015558.01.T01 | AT1G21890 | 48.175 | 137 | 50 | 1 | 13 | 128 | 6 | 142 | 1.38e-35 | 130 |
MsG0380015558.01.T01 | AT1G21890 | 52.381 | 105 | 48 | 1 | 129 | 233 | 213 | 315 | 4.88e-32 | 121 |
MsG0380015558.01.T01 | AT4G30420 | 27.660 | 329 | 151 | 6 | 12 | 255 | 3 | 329 | 2.69e-32 | 123 |
MsG0380015558.01.T01 | AT4G28040 | 27.389 | 314 | 153 | 6 | 23 | 263 | 13 | 324 | 1.21e-31 | 120 |
MsG0380015558.01.T01 | AT4G28040 | 27.389 | 314 | 153 | 6 | 23 | 263 | 13 | 324 | 1.21e-31 | 120 |
MsG0380015558.01.T01 | AT4G28040 | 27.389 | 314 | 153 | 6 | 23 | 263 | 13 | 324 | 1.21e-31 | 120 |
MsG0380015558.01.T01 | AT4G28040 | 27.389 | 314 | 153 | 6 | 23 | 263 | 13 | 324 | 1.21e-31 | 120 |
MsG0380015558.01.T01 | AT4G28040 | 27.389 | 314 | 153 | 6 | 23 | 263 | 13 | 324 | 1.21e-31 | 120 |
MsG0380015558.01.T01 | AT4G30420 | 28.165 | 316 | 140 | 6 | 25 | 255 | 6 | 319 | 1.81e-31 | 120 |
MsG0380015558.01.T01 | AT3G53210 | 29.412 | 323 | 147 | 7 | 14 | 255 | 6 | 328 | 6.55e-31 | 119 |
MsG0380015558.01.T01 | AT5G13670 | 41.985 | 131 | 74 | 2 | 132 | 262 | 207 | 335 | 7.28e-31 | 119 |
MsG0380015558.01.T01 | AT5G13670 | 34.058 | 138 | 70 | 1 | 12 | 128 | 2 | 139 | 5.76e-20 | 89.0 |
MsG0380015558.01.T01 | AT3G30340 | 29.032 | 310 | 133 | 8 | 40 | 265 | 33 | 339 | 4.78e-30 | 116 |
MsG0380015558.01.T01 | AT1G43650 | 29.355 | 310 | 142 | 7 | 23 | 255 | 12 | 321 | 4.44e-29 | 113 |
MsG0380015558.01.T01 | AT5G64700 | 41.129 | 124 | 71 | 1 | 132 | 255 | 211 | 332 | 3.19e-27 | 108 |
MsG0380015558.01.T01 | AT5G64700 | 31.618 | 136 | 72 | 1 | 12 | 126 | 2 | 137 | 2.45e-11 | 63.9 |
MsG0380015558.01.T01 | AT5G40210 | 26.332 | 319 | 162 | 9 | 10 | 259 | 4 | 318 | 5.41e-26 | 105 |
MsG0380015558.01.T01 | AT4G24980 | 29.167 | 264 | 159 | 5 | 39 | 282 | 8 | 263 | 5.43e-24 | 98.6 |
MsG0380015558.01.T01 | AT1G75500 | 40.000 | 130 | 57 | 2 | 19 | 127 | 21 | 150 | 1.06e-23 | 99.8 |
MsG0380015558.01.T01 | AT1G75500 | 37.903 | 124 | 75 | 1 | 132 | 255 | 223 | 344 | 1.69e-20 | 90.5 |
MsG0380015558.01.T01 | AT1G75500 | 40.000 | 130 | 57 | 2 | 19 | 127 | 21 | 150 | 1.06e-23 | 99.8 |
MsG0380015558.01.T01 | AT1G75500 | 37.903 | 124 | 75 | 1 | 132 | 255 | 223 | 344 | 1.69e-20 | 90.5 |
MsG0380015558.01.T01 | AT5G40240 | 25.460 | 326 | 160 | 7 | 18 | 260 | 20 | 345 | 3.16e-23 | 98.2 |
MsG0380015558.01.T01 | AT5G40240 | 25.460 | 326 | 160 | 7 | 18 | 260 | 20 | 345 | 3.16e-23 | 98.2 |
MsG0380015558.01.T01 | AT5G40240 | 25.460 | 326 | 160 | 7 | 18 | 260 | 34 | 359 | 4.10e-23 | 97.8 |
MsG0380015558.01.T01 | AT3G28130 | 26.821 | 302 | 135 | 9 | 38 | 255 | 33 | 332 | 8.49e-23 | 96.7 |
MsG0380015558.01.T01 | AT3G28070 | 24.715 | 263 | 133 | 5 | 79 | 277 | 99 | 360 | 1.76e-22 | 95.9 |
MsG0380015558.01.T01 | AT3G18200 | 36.486 | 148 | 70 | 3 | 2 | 128 | 22 | 166 | 4.34e-22 | 95.1 |
MsG0380015558.01.T01 | AT3G18200 | 33.548 | 155 | 97 | 4 | 132 | 283 | 229 | 380 | 3.70e-21 | 92.4 |
MsG0380015558.01.T01 | AT3G28050 | 27.350 | 234 | 112 | 3 | 79 | 255 | 94 | 326 | 9.04e-22 | 94.0 |
MsG0380015558.01.T01 | AT3G18200 | 33.548 | 155 | 97 | 4 | 132 | 283 | 99 | 250 | 1.06e-21 | 92.0 |
MsG0380015558.01.T01 | AT1G68170 | 36.301 | 146 | 88 | 2 | 142 | 284 | 212 | 355 | 1.32e-21 | 93.6 |
MsG0380015558.01.T01 | AT1G25270 | 34.848 | 132 | 82 | 2 | 148 | 279 | 217 | 344 | 1.36e-21 | 93.2 |
MsG0380015558.01.T01 | AT1G68170 | 36.301 | 146 | 88 | 2 | 142 | 284 | 222 | 365 | 1.47e-21 | 93.6 |
MsG0380015558.01.T01 | AT3G28080 | 30.000 | 200 | 99 | 4 | 80 | 255 | 8 | 190 | 1.59e-21 | 90.5 |
MsG0380015558.01.T01 | AT3G28080 | 30.000 | 200 | 99 | 4 | 80 | 255 | 97 | 279 | 5.54e-21 | 90.9 |
MsG0380015558.01.T01 | AT4G15540 | 23.964 | 338 | 174 | 6 | 18 | 283 | 17 | 343 | 6.96e-21 | 91.3 |
MsG0380015558.01.T01 | AT4G15540 | 23.964 | 338 | 174 | 6 | 18 | 283 | 17 | 343 | 6.96e-21 | 91.3 |
MsG0380015558.01.T01 | AT5G47470 | 23.885 | 314 | 162 | 3 | 23 | 259 | 63 | 376 | 3.36e-18 | 84.0 |
MsG0380015558.01.T01 | AT5G47470 | 23.885 | 314 | 162 | 3 | 23 | 259 | 35 | 348 | 3.59e-18 | 84.0 |
MsG0380015558.01.T01 | AT5G47470 | 23.885 | 314 | 162 | 3 | 23 | 259 | 63 | 376 | 3.99e-18 | 84.0 |
MsG0380015558.01.T01 | AT3G28130 | 31.159 | 138 | 87 | 3 | 132 | 263 | 86 | 221 | 1.39e-17 | 80.1 |
MsG0380015558.01.T01 | AT3G28130 | 32.258 | 124 | 82 | 2 | 132 | 255 | 125 | 246 | 1.40e-17 | 80.9 |
MsG0380015558.01.T01 | AT3G28130 | 32.258 | 124 | 82 | 2 | 132 | 255 | 125 | 246 | 1.40e-17 | 80.9 |
MsG0380015558.01.T01 | AT3G53210 | 34.437 | 151 | 71 | 3 | 14 | 136 | 6 | 156 | 1.86e-17 | 80.5 |
MsG0380015558.01.T01 | AT3G28080 | 30.645 | 124 | 84 | 2 | 132 | 255 | 86 | 207 | 2.39e-17 | 79.7 |
MsG0380015558.01.T01 | AT3G28080 | 30.645 | 124 | 84 | 2 | 132 | 255 | 123 | 244 | 3.54e-17 | 79.7 |
MsG0380015558.01.T01 | AT3G28080 | 30.645 | 124 | 84 | 2 | 132 | 255 | 123 | 244 | 3.54e-17 | 79.7 |
MsG0380015558.01.T01 | AT3G28080 | 30.645 | 124 | 84 | 2 | 132 | 255 | 123 | 244 | 3.54e-17 | 79.7 |
MsG0380015558.01.T01 | AT3G28080 | 30.645 | 124 | 84 | 2 | 132 | 255 | 123 | 244 | 3.54e-17 | 79.7 |
MsG0380015558.01.T01 | AT1G09380 | 32.961 | 179 | 80 | 4 | 18 | 175 | 8 | 167 | 7.85e-17 | 80.1 |
MsG0380015558.01.T01 | AT1G09380 | 28.333 | 120 | 84 | 2 | 133 | 252 | 209 | 326 | 8.44e-16 | 77.0 |
MsG0380015558.01.T01 | AT3G28080 | 30.645 | 124 | 84 | 2 | 132 | 255 | 212 | 333 | 9.43e-17 | 79.7 |
MsG0380015558.01.T01 | AT3G28080 | 30.645 | 124 | 84 | 2 | 132 | 255 | 204 | 325 | 9.98e-17 | 79.7 |
MsG0380015558.01.T01 | AT5G45370 | 22.623 | 305 | 156 | 7 | 31 | 260 | 33 | 332 | 2.48e-16 | 78.6 |
MsG0380015558.01.T01 | AT3G53210 | 37.097 | 124 | 76 | 1 | 132 | 255 | 150 | 271 | 5.76e-16 | 77.0 |
MsG0380015558.01.T01 | AT3G28070 | 26.897 | 145 | 102 | 3 | 135 | 277 | 89 | 231 | 1.35e-15 | 74.7 |
MsG0380015558.01.T01 | AT3G28070 | 26.897 | 145 | 102 | 3 | 135 | 277 | 126 | 268 | 2.15e-15 | 74.7 |
MsG0380015558.01.T01 | AT3G28100 | 30.645 | 124 | 84 | 2 | 132 | 255 | 212 | 333 | 1.24e-14 | 73.6 |
MsG0380015558.01.T01 | AT5G40230 | 29.078 | 141 | 92 | 2 | 132 | 266 | 220 | 358 | 2.63e-14 | 72.8 |
MsG0380015558.01.T01 | AT5G40230 | 32.576 | 132 | 68 | 3 | 18 | 128 | 21 | 152 | 6.85e-11 | 62.4 |
MsG0380015558.01.T01 | AT1G70260 | 32.800 | 125 | 82 | 1 | 131 | 255 | 215 | 337 | 2.79e-14 | 72.8 |
MsG0380015558.01.T01 | AT3G28070 | 24.424 | 217 | 101 | 4 | 79 | 233 | 99 | 314 | 1.11e-13 | 70.5 |
MsG0380015558.01.T01 | AT4G01430 | 34.074 | 135 | 51 | 3 | 39 | 151 | 30 | 148 | 1.44e-13 | 70.1 |
MsG0380015558.01.T01 | AT4G01430 | 34.074 | 135 | 51 | 3 | 39 | 151 | 30 | 148 | 1.57e-13 | 70.5 |
MsG0380015558.01.T01 | AT3G45870 | 32.061 | 131 | 68 | 2 | 19 | 128 | 13 | 143 | 5.60e-13 | 68.9 |
MsG0380015558.01.T01 | AT3G45870 | 32.061 | 131 | 68 | 2 | 19 | 128 | 13 | 143 | 6.75e-13 | 67.8 |
MsG0380015558.01.T01 | AT4G01440 | 31.111 | 135 | 72 | 1 | 15 | 128 | 7 | 141 | 8.11e-13 | 67.4 |
MsG0380015558.01.T01 | AT3G45870 | 32.061 | 131 | 68 | 2 | 19 | 128 | 13 | 143 | 1.41e-12 | 67.4 |
MsG0380015558.01.T01 | AT4G01440 | 31.111 | 135 | 72 | 1 | 15 | 128 | 7 | 141 | 1.64e-12 | 67.0 |
MsG0380015558.01.T01 | AT4G01440 | 31.111 | 135 | 72 | 1 | 15 | 128 | 7 | 141 | 1.84e-12 | 67.4 |
MsG0380015558.01.T01 | AT1G01070 | 31.884 | 138 | 72 | 3 | 13 | 128 | 11 | 148 | 5.81e-12 | 65.9 |
MsG0380015558.01.T01 | AT1G01070 | 30.370 | 135 | 89 | 2 | 126 | 260 | 211 | 340 | 1.97e-11 | 64.3 |
MsG0380015558.01.T01 | AT3G30340 | 34.545 | 110 | 51 | 1 | 40 | 128 | 33 | 142 | 8.80e-12 | 64.7 |
MsG0380015558.01.T01 | AT5G45370 | 31.933 | 119 | 60 | 2 | 31 | 128 | 33 | 151 | 1.10e-11 | 65.1 |
MsG0380015558.01.T01 | AT5G45370 | 31.933 | 119 | 60 | 2 | 31 | 128 | 33 | 151 | 1.10e-11 | 65.1 |
MsG0380015558.01.T01 | AT1G11450 | 26.523 | 279 | 145 | 9 | 13 | 253 | 11 | 267 | 1.17e-11 | 64.7 |
MsG0380015558.01.T01 | AT1G11450 | 26.523 | 279 | 145 | 9 | 13 | 253 | 11 | 267 | 1.21e-11 | 64.7 |
MsG0380015558.01.T01 | AT1G01070 | 30.370 | 135 | 89 | 2 | 126 | 260 | 164 | 293 | 1.96e-11 | 63.9 |
MsG0380015558.01.T01 | AT5G64700 | 31.618 | 136 | 72 | 1 | 12 | 126 | 2 | 137 | 2.06e-11 | 63.2 |
MsG0380015558.01.T01 | AT4G19185 | 32.500 | 120 | 60 | 1 | 30 | 128 | 33 | 152 | 2.37e-11 | 63.9 |
MsG0380015558.01.T01 | AT1G11460 | 26.316 | 285 | 151 | 9 | 14 | 260 | 12 | 275 | 7.68e-11 | 62.4 |
Find 81 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAATAGGTGTTTCTAATTT+TGG | 0.097188 | 3:-71834842 | MsG0380015558.01.T01:CDS |
GAAGAATATATTATGAATTT+TGG | 0.165396 | 3:-71830340 | MsG0380015558.01.T01:three_prime_UTR |
TTTGAAAATGACAAAATTAA+TGG | 0.170954 | 3:-71830197 | MsG0380015558.01.T01:three_prime_UTR |
TCAACCTTAATATGCTTAAT+TGG | 0.206118 | 3:-71831946 | MsG0380015558.01.T01:CDS |
GATCAAGGATTTACTTTCTT+GGG | 0.226580 | 3:-71832581 | MsG0380015558.01.T01:CDS |
ATGATCATCACTTGTGCTTT+AGG | 0.227026 | 3:-71830862 | MsG0380015558.01.T01:CDS |
GTCACTCTGGTCTTGAGGTT+TGG | 0.247478 | 3:-71831885 | MsG0380015558.01.T01:CDS |
GCACTTCAATTTGGGTTTGC+AGG | 0.256620 | 3:-71834779 | MsG0380015558.01.T01:CDS |
GGCACCAATTAAGCATATTA+AGG | 0.276307 | 3:+71831942 | None:intergenic |
GGTTGGGACTTTAGACTATA+TGG | 0.302017 | 3:-71831856 | MsG0380015558.01.T01:CDS |
GGTCTTGAGGTTTGGGCCAT+TGG | 0.308784 | 3:-71831877 | MsG0380015558.01.T01:CDS |
TCACTCTGGTCTTGAGGTTT+GGG | 0.309943 | 3:-71831884 | MsG0380015558.01.T01:CDS |
ATTATTTCATGCTTGTGTTT+TGG | 0.318290 | 3:-71830375 | MsG0380015558.01.T01:three_prime_UTR |
TTAACGGTGGCACTTCAATT+TGG | 0.325006 | 3:-71834788 | MsG0380015558.01.T01:CDS |
TAGACATCAGATGAAGTAAT+TGG | 0.329648 | 3:+71830451 | None:intergenic |
TTTGTTGATTACAGTATCAT+TGG | 0.334370 | 3:-71830595 | MsG0380015558.01.T01:intron |
TAATTGCAGATTCATAATTA+AGG | 0.336120 | 3:+71830394 | None:intergenic |
TGAGGTTTGGGCCATTGGTT+GGG | 0.351081 | 3:-71831872 | MsG0380015558.01.T01:CDS |
TTGAGGTTTGGGCCATTGGT+TGG | 0.352099 | 3:-71831873 | MsG0380015558.01.T01:CDS |
AGATCAAGGATTTACTTTCT+TGG | 0.355086 | 3:-71832582 | MsG0380015558.01.T01:CDS |
TCAGTTTGCTTCATTGCAAC+TGG | 0.357064 | 3:+71830484 | None:intergenic |
ATAGACCCACTGCAATAATC+AGG | 0.361308 | 3:+71830569 | None:intergenic |
TAACGGTGGCACTTCAATTT+GGG | 0.361637 | 3:-71834787 | MsG0380015558.01.T01:CDS |
AGTGGAGTTGCTCTGCAAAA+AGG | 0.371654 | 3:+71830833 | None:intergenic |
ATTTGGTTACCTGAAAATTA+CGG | 0.378910 | 3:+71832487 | None:intergenic |
TTAAATGCTGTATAAAATAC+TGG | 0.379245 | 3:+71830895 | None:intergenic |
GGTAATAAAATGAATAAGGC+AGG | 0.427576 | 3:-71834821 | MsG0380015558.01.T01:CDS |
GGGTCTATATTCTGTGGTGT+GGG | 0.434106 | 3:-71830554 | MsG0380015558.01.T01:CDS |
CGAAGCATAGCAAAAGTGAT+TGG | 0.452310 | 3:-71832301 | MsG0380015558.01.T01:CDS |
TTTAGGCCAGTGATAGATCA+AGG | 0.452691 | 3:-71832596 | MsG0380015558.01.T01:intron |
TTTATTTATATTCTTTACAT+TGG | 0.456802 | 3:+71830103 | None:intergenic |
GTTGATAGTGACATTTCTGC+TGG | 0.464929 | 3:+71831964 | None:intergenic |
TATATTCTTTACATTGGTTG+AGG | 0.465647 | 3:+71830109 | None:intergenic |
GGCAGGGCCTTATGTGTTAA+CGG | 0.467713 | 3:-71834804 | MsG0380015558.01.T01:CDS |
TGGGTCTATATTCTGTGGTG+TGG | 0.473719 | 3:-71830555 | MsG0380015558.01.T01:CDS |
TGCTTCATTGCAACTGGTGA+TGG | 0.475348 | 3:+71830490 | None:intergenic |
TTTCAGGGAATAATTACCTC+AGG | 0.490153 | 3:-71830961 | MsG0380015558.01.T01:intron |
ATTCATTCCCATGTTGAGAC+TGG | 0.492222 | 3:+71834736 | None:intergenic |
TTTACATTGGTTGAGGAATG+TGG | 0.516232 | 3:+71830116 | None:intergenic |
GTTAGATTATTGTTTAGAGA+TGG | 0.516552 | 3:+71834900 | None:intergenic |
CTCCATGGCCAGTCTCAACA+TGG | 0.517219 | 3:-71834744 | MsG0380015558.01.T01:CDS |
TGGAGCCCTGATTATTGCAG+TGG | 0.520137 | 3:-71830575 | MsG0380015558.01.T01:CDS |
GAAGCATAGCAAAAGTGATT+GGG | 0.521865 | 3:-71832300 | MsG0380015558.01.T01:CDS |
GTAAATCCTTGATCTATCAC+TGG | 0.527191 | 3:+71832590 | None:intergenic |
ACAAGTGATGATCATACAAA+GGG | 0.529299 | 3:+71830870 | None:intergenic |
TCCCATGTTGAGACTGGCCA+TGG | 0.532428 | 3:+71834742 | None:intergenic |
TTCATTGCTGAGCGTCACTC+TGG | 0.533655 | 3:-71831898 | MsG0380015558.01.T01:CDS |
AGTGCCACCGTTAACACATA+AGG | 0.539701 | 3:+71834797 | None:intergenic |
ATCAAGGATTTACTTTCTTG+GGG | 0.542739 | 3:-71832580 | MsG0380015558.01.T01:CDS |
AGCGTATTATGTGCAAGGAT+TGG | 0.543440 | 3:-71830935 | MsG0380015558.01.T01:CDS |
CTTGGGGATGCAATATACAT+CGG | 0.549174 | 3:-71832564 | MsG0380015558.01.T01:CDS |
TGCCACCACACTAGTTTGCA+TGG | 0.549697 | 3:+71831921 | None:intergenic |
TGAGCGTCACTCTGGTCTTG+AGG | 0.557312 | 3:-71831890 | MsG0380015558.01.T01:CDS |
CAGAGCAACTCCACTTGGGA+AGG | 0.561936 | 3:-71830825 | MsG0380015558.01.T01:intron |
TTCATTGCAACTGGTGATGG+TGG | 0.573404 | 3:+71830493 | None:intergenic |
GGAGCCCTGATTATTGCAGT+GGG | 0.579920 | 3:-71830574 | MsG0380015558.01.T01:CDS |
GGTCTATATTCTGTGGTGTG+GGG | 0.589276 | 3:-71830553 | MsG0380015558.01.T01:CDS |
GCAACTGGTGATGGTGGCAT+AGG | 0.594061 | 3:+71830499 | None:intergenic |
CACAAGTGATGATCATACAA+AGG | 0.594526 | 3:+71830869 | None:intergenic |
TTTGCAGAGCAACTCCACTT+GGG | 0.594536 | 3:-71830829 | MsG0380015558.01.T01:CDS |
GGAATAGCGTATTATGTGCA+AGG | 0.597413 | 3:-71830940 | MsG0380015558.01.T01:CDS |
TAGTCTAAAGTCCCAACCAA+TGG | 0.609672 | 3:+71831861 | None:intergenic |
GTAATAAAATGAATAAGGCA+GGG | 0.617635 | 3:-71834820 | MsG0380015558.01.T01:CDS |
GAAAATTACGGCTAGCACAA+AGG | 0.618070 | 3:+71832499 | None:intergenic |
TTAGAAGTTACCTTCCCAAG+TGG | 0.619720 | 3:+71830815 | None:intergenic |
TAGACCCACTGCAATAATCA+GGG | 0.620855 | 3:+71830570 | None:intergenic |
GAACGCAAAATGACAATACA+CGG | 0.630668 | 3:+71830242 | None:intergenic |
TGCAGTGGGTCTATATTCTG+TGG | 0.631521 | 3:-71830560 | MsG0380015558.01.T01:CDS |
GGATTGGTATTTCAAAGCAG+AGG | 0.631848 | 3:-71830919 | MsG0380015558.01.T01:CDS |
AGGAGCATACATATTCTCCA+TGG | 0.632777 | 3:-71834759 | MsG0380015558.01.T01:CDS |
GCTAGCACAAAGGTAACAGA+AGG | 0.636570 | 3:+71832509 | None:intergenic |
ACATTGGTTGAGGAATGTGG+AGG | 0.643513 | 3:+71830119 | None:intergenic |
ACTATATGGTCCTCTCTACA+CGG | 0.654238 | 3:-71831842 | MsG0380015558.01.T01:intron |
ATAGAGGGTACCGTGTAGAG+AGG | 0.656220 | 3:+71831832 | None:intergenic |
TCCATGGCCAGTCTCAACAT+GGG | 0.656868 | 3:-71834743 | MsG0380015558.01.T01:CDS |
CACATAATACGCTATTCCTG+AGG | 0.664509 | 3:+71830945 | None:intergenic |
TGCCATGCAAACTAGTGTGG+TGG | 0.675189 | 3:-71831923 | MsG0380015558.01.T01:CDS |
TGGTGCCATGCAAACTAGTG+TGG | 0.679552 | 3:-71831926 | MsG0380015558.01.T01:CDS |
AAGTGATGATCATACAAAGG+GGG | 0.720906 | 3:+71830872 | None:intergenic |
CAAGTGATGATCATACAAAG+GGG | 0.746307 | 3:+71830871 | None:intergenic |
AGGGCCTTATGTGTTAACGG+TGG | 0.764572 | 3:-71834801 | MsG0380015558.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAAAATAATTTTTTATT+AGG | - | Chr3:71832007-71832026 | MsG0380015558.01.T01:intron | 0.0% |
!! | AAAAACAATTAAATATAATG+TGG | + | Chr3:71832237-71832256 | None:intergenic | 10.0% |
!! | AAAACAATTAAATATAATGT+GGG | + | Chr3:71832236-71832255 | None:intergenic | 10.0% |
!! | ATATATATATGAAAAAAGTT+AGG | + | Chr3:71833206-71833225 | None:intergenic | 10.0% |
!! | TATATATATGAAAAAAGTTA+GGG | + | Chr3:71833205-71833224 | None:intergenic | 10.0% |
!! | TCCTAATATATTAAAATTAA+AGG | - | Chr3:71832544-71832563 | MsG0380015558.01.T01:CDS | 10.0% |
!! | TGTAATTAAGATTATAAATT+TGG | + | Chr3:71833834-71833853 | None:intergenic | 10.0% |
!! | TTTATTTATATTCTTTACAT+TGG | + | Chr3:71834899-71834918 | None:intergenic | 10.0% |
!!! | ACCTTTAATTTTAATATATT+AGG | + | Chr3:71832548-71832567 | None:intergenic | 10.0% |
!!! | ATTAAATAATTGTTGATTTT+TGG | - | Chr3:71833450-71833469 | MsG0380015558.01.T01:intron | 10.0% |
!!! | TATGCTTTATTTTAATATAT+GGG | - | Chr3:71833788-71833807 | MsG0380015558.01.T01:intron | 10.0% |
!!! | TCATTTTCTTTATAAAATTT+TGG | - | Chr3:71831904-71831923 | MsG0380015558.01.T01:CDS | 10.0% |
!!! | TTATGCTTTATTTTAATATA+TGG | - | Chr3:71833787-71833806 | MsG0380015558.01.T01:intron | 10.0% |
!!! | TTTTCTTTAAAGATATTTAA+GGG | - | Chr3:71830717-71830736 | MsG0380015558.01.T01:intron | 10.0% |
!!! | TTTTTCTTTAAAGATATTTA+AGG | - | Chr3:71830716-71830735 | MsG0380015558.01.T01:intron | 10.0% |
!! | AAAAACACTTTCATAAAAAA+AGG | + | Chr3:71832928-71832947 | None:intergenic | 15.0% |
!! | AAAACACTTTCATAAAAAAA+GGG | + | Chr3:71832927-71832946 | None:intergenic | 15.0% |
!! | ATGCAAAAATAGTAAATAAT+TGG | - | Chr3:71831975-71831994 | MsG0380015558.01.T01:CDS | 15.0% |
!! | GTCATTTATCAAATTATTAT+TGG | + | Chr3:71834351-71834370 | None:intergenic | 15.0% |
!! | TATATTAAAATTAAAGGTCT+TGG | - | Chr3:71832550-71832569 | MsG0380015558.01.T01:CDS | 15.0% |
!! | TCAAATAGGAAAAAATAAAA+GGG | + | Chr3:71834787-71834806 | None:intergenic | 15.0% |
!! | TGAATTACTAACAAAAATTA+GGG | - | Chr3:71831244-71831263 | MsG0380015558.01.T01:intron | 15.0% |
!! | TGCAAAAATAGTAAATAATT+GGG | - | Chr3:71831976-71831995 | MsG0380015558.01.T01:CDS | 15.0% |
!! | TTATACATTTAAATAAGTGT+AGG | + | Chr3:71832206-71832225 | None:intergenic | 15.0% |
!! | TTCAAATAGGAAAAAATAAA+AGG | + | Chr3:71834788-71834807 | None:intergenic | 15.0% |
!! | TTGAATTACTAACAAAAATT+AGG | - | Chr3:71831243-71831262 | MsG0380015558.01.T01:intron | 15.0% |
!! | TTTGAAAATGACAAAATTAA+TGG | - | Chr3:71834802-71834821 | MsG0380015558.01.T01:CDS | 15.0% |
!!! | AAATAAAGCATAATTTTGAT+TGG | + | Chr3:71833780-71833799 | None:intergenic | 15.0% |
!!! | ATGCTTTATTTTAATATATG+GGG | - | Chr3:71833789-71833808 | MsG0380015558.01.T01:intron | 15.0% |
!!! | CAATGAATTTAAAATTTTCA+GGG | - | Chr3:71834023-71834042 | MsG0380015558.01.T01:intron | 15.0% |
!!! | GAAGAATATATTATGAATTT+TGG | - | Chr3:71834659-71834678 | MsG0380015558.01.T01:intron | 15.0% |
!!! | TAATTTTGTCATTTTCAAAT+AGG | + | Chr3:71834801-71834820 | None:intergenic | 15.0% |
!!! | TACTATCCATATTTTTTTTA+GGG | + | Chr3:71831066-71831085 | None:intergenic | 15.0% |
!!! | TCAATGAATTTAAAATTTTC+AGG | - | Chr3:71834022-71834041 | MsG0380015558.01.T01:intron | 15.0% |
!!! | TTTTGGTAATAAAATGAATA+AGG | - | Chr3:71830174-71830193 | MsG0380015558.01.T01:three_prime_UTR | 15.0% |
!! | AAACACTTTCATAAAAAAAG+GGG | + | Chr3:71832926-71832945 | None:intergenic | 20.0% |
!! | AAGAGAAATAAGTATTTCAA+GGG | - | Chr3:71831113-71831132 | MsG0380015558.01.T01:intron | 20.0% |
!! | ACATAATTAAATGTAATCAG+AGG | - | Chr3:71834369-71834388 | MsG0380015558.01.T01:intron | 20.0% |
!! | AGTTTACAAAAATATGGTTT+GGG | + | Chr3:71833705-71833724 | None:intergenic | 20.0% |
!! | ATCATTCGATTAAGATTTAA+TGG | + | Chr3:71830614-71830633 | None:intergenic | 20.0% |
!! | ATGTTAGAAATCACAAAATT+AGG | - | Chr3:71831476-71831495 | MsG0380015558.01.T01:intron | 20.0% |
!! | ATTGTAAAACAGAATAAGTA+AGG | + | Chr3:71830373-71830392 | None:intergenic | 20.0% |
!! | GTATGGAATTAAAATATTGA+CGG | - | Chr3:71830461-71830480 | MsG0380015558.01.T01:CDS | 20.0% |
!! | TAAGAGAAATAAGTATTTCA+AGG | - | Chr3:71831112-71831131 | MsG0380015558.01.T01:intron | 20.0% |
!! | TAATTGCAGATTCATAATTA+AGG | + | Chr3:71834608-71834627 | None:intergenic | 20.0% |
!! | TACAAAGAAATGGAAAAAAT+AGG | - | Chr3:71830142-71830161 | MsG0380015558.01.T01:three_prime_UTR | 20.0% |
!! | TAGTTTACAAAAATATGGTT+TGG | + | Chr3:71833706-71833725 | None:intergenic | 20.0% |
!! | TGTAGGTCTATTATTAAAAA+GGG | + | Chr3:71832159-71832178 | None:intergenic | 20.0% |
!! | TTAAATGCTGTATAAAATAC+TGG | + | Chr3:71834107-71834126 | None:intergenic | 20.0% |
!! | TTATATAACCCGAAAAAAAT+AGG | + | Chr3:71833540-71833559 | None:intergenic | 20.0% |
!! | TTGATTATAACACAAGTTAA+TGG | + | Chr3:71832642-71832661 | None:intergenic | 20.0% |
!! | TTGTAAAACAGAATAAGTAA+GGG | + | Chr3:71830372-71830391 | None:intergenic | 20.0% |
!! | TTTCTAACACTTTATAAGTA+TGG | - | Chr3:71831034-71831053 | MsG0380015558.01.T01:intron | 20.0% |
!!! | AAAATAGGTGTTTCTAATTT+TGG | - | Chr3:71830157-71830176 | MsG0380015558.01.T01:three_prime_UTR | 20.0% |
!!! | AAACCATATTTTTGTAAACT+AGG | - | Chr3:71833705-71833724 | MsG0380015558.01.T01:intron | 20.0% |
!!! | AAACTTTTATAAGAAAGAAG+AGG | + | Chr3:71834214-71834233 | None:intergenic | 20.0% |
!!! | ACTATCCATATTTTTTTTAG+GGG | + | Chr3:71831065-71831084 | None:intergenic | 20.0% |
!!! | ATGGTAGTATAAGATTTTTT+TGG | + | Chr3:71832623-71832642 | None:intergenic | 20.0% |
!!! | CTACTATCCATATTTTTTTT+AGG | + | Chr3:71831067-71831086 | None:intergenic | 20.0% |
!!! | TTTTCTTGAATACAAAGAAA+TGG | - | Chr3:71830132-71830151 | MsG0380015558.01.T01:three_prime_UTR | 20.0% |
!!! | TTTTTTTGGCATTAATTCTT+CGG | + | Chr3:71832609-71832628 | None:intergenic | 20.0% |
! | AAAACACTTATCGATAGAAT+TGG | + | Chr3:71831288-71831307 | None:intergenic | 25.0% |
! | AAAAGGGAAATGTTAAGAAA+AGG | + | Chr3:71832143-71832162 | None:intergenic | 25.0% |
! | AATAGAAAAGGTGAATTTGT+GGG | + | Chr3:71832772-71832791 | None:intergenic | 25.0% |
! | AATGATTATCAATGTTTCCA+AGG | - | Chr3:71830628-71830647 | MsG0380015558.01.T01:intron | 25.0% |
! | ATAGTCCCCTAAAAAAAATA+TGG | - | Chr3:71831057-71831076 | MsG0380015558.01.T01:intron | 25.0% |
! | ATGAAGTAGCTGTTTAAATT+AGG | - | Chr3:71833679-71833698 | MsG0380015558.01.T01:intron | 25.0% |
! | ATTTAAACAGCTACTTCATT+TGG | + | Chr3:71833678-71833697 | None:intergenic | 25.0% |
! | ATTTGGTTACCTGAAAATTA+CGG | + | Chr3:71832515-71832534 | None:intergenic | 25.0% |
! | CGTAAAAAATTTGTCTCAAT+TGG | - | Chr3:71832334-71832353 | MsG0380015558.01.T01:intron | 25.0% |
! | GTAATAAAATGAATAAGGCA+GGG | - | Chr3:71830179-71830198 | MsG0380015558.01.T01:three_prime_UTR | 25.0% |
! | GTGTAGGTCTATTATTAAAA+AGG | + | Chr3:71832160-71832179 | None:intergenic | 25.0% |
! | GTTAGATTATTGTTTAGAGA+TGG | + | Chr3:71830102-71830121 | None:intergenic | 25.0% |
! | TATTAGGAGAACCTATAATT+TGG | + | Chr3:71832532-71832551 | None:intergenic | 25.0% |
! | TCAACCTTAATATGCTTAAT+TGG | - | Chr3:71833053-71833072 | MsG0380015558.01.T01:intron | 25.0% |
! | TCCAAAAGTTGTCATATAAA+TGG | - | Chr3:71831931-71831950 | MsG0380015558.01.T01:CDS | 25.0% |
! | TGTGTTATAATCAATGTATC+AGG | - | Chr3:71832648-71832667 | MsG0380015558.01.T01:intron | 25.0% |
! | TTAAACACACAAAATTGAGT+CGG | - | Chr3:71831574-71831593 | MsG0380015558.01.T01:intron | 25.0% |
! | TTACATCTAAAGAGAATAAG+TGG | + | Chr3:71831422-71831441 | None:intergenic | 25.0% |
! | TTTCTCTTTCTCTATTACTT+TGG | - | Chr3:71831865-71831884 | MsG0380015558.01.T01:CDS | 25.0% |
!! | ATATCATTTCTCTTTTGCAT+AGG | + | Chr3:71831780-71831799 | None:intergenic | 25.0% |
!! | ATTATTTCATGCTTGTGTTT+TGG | - | Chr3:71834624-71834643 | MsG0380015558.01.T01:intron | 25.0% |
!! | GTACCATTTGGTATTATTTT+AGG | - | Chr3:71832386-71832405 | MsG0380015558.01.T01:intron | 25.0% |
!! | TATATTCTTTACATTGGTTG+AGG | + | Chr3:71834893-71834912 | None:intergenic | 25.0% |
!! | TATCATTTCTCTTTTGCATA+GGG | + | Chr3:71831779-71831798 | None:intergenic | 25.0% |
!! | TCCATTTATATGACAACTTT+TGG | + | Chr3:71831935-71831954 | None:intergenic | 25.0% |
!! | TCTTTAAAGATATTTAAGGG+TGG | - | Chr3:71830720-71830739 | MsG0380015558.01.T01:intron | 25.0% |
!! | TTAAGTTCGAAAAAAAGTGT+AGG | + | Chr3:71832176-71832195 | None:intergenic | 25.0% |
!! | TTTGTTGATTACAGTATCAT+TGG | - | Chr3:71834404-71834423 | MsG0380015558.01.T01:intron | 25.0% |
!! | TTTTTCATTGCATTTGCAAT+AGG | + | Chr3:71833422-71833441 | None:intergenic | 25.0% |
!!! | CTATCGATAAGTGTTTTTTT+TGG | - | Chr3:71831291-71831310 | MsG0380015558.01.T01:intron | 25.0% |
!!! | TATGAATTTTGGTTTACTAC+AGG | - | Chr3:71834670-71834689 | MsG0380015558.01.T01:CDS | 25.0% |
!!! | TTGATGATGATACTTTACAA+AGG | - | Chr3:71832746-71832765 | MsG0380015558.01.T01:intron | 25.0% |
!!! | TTTTCAGGTAACCAAATTAT+AGG | - | Chr3:71832518-71832537 | MsG0380015558.01.T01:CDS | 25.0% |
AAAGAATAGAATGTCTACCA+AGG | - | Chr3:71833282-71833301 | MsG0380015558.01.T01:intron | 30.0% | |
ACAAGTGATGATCATACAAA+GGG | + | Chr3:71834132-71834151 | None:intergenic | 30.0% | |
ACATGTTTCATTCACTAACT+TGG | - | Chr3:71830411-71830430 | MsG0380015558.01.T01:three_prime_UTR | 30.0% | |
AGAAAAGTGGTAATTAGCAT+AGG | + | Chr3:71830761-71830780 | None:intergenic | 30.0% | |
AGATCAAGGATTTACTTTCT+TGG | - | Chr3:71832417-71832436 | MsG0380015558.01.T01:intron | 30.0% | |
ATACGTCTCAAATAGGAAAT+AGG | - | Chr3:71833378-71833397 | MsG0380015558.01.T01:intron | 30.0% | |
ATATCTGATACGTCTCAAAT+AGG | - | Chr3:71833371-71833390 | MsG0380015558.01.T01:intron | 30.0% | |
ATCAAGGATTTACTTTCTTG+GGG | - | Chr3:71832419-71832438 | MsG0380015558.01.T01:intron | 30.0% | |
ATGTATTGTAACGTACCATT+TGG | - | Chr3:71832374-71832393 | MsG0380015558.01.T01:intron | 30.0% | |
CAAAACACGTTAGAATGTTT+CGG | - | Chr3:71833591-71833610 | MsG0380015558.01.T01:intron | 30.0% | |
CGAGTTTGATAAAATCAAGA+TGG | - | Chr3:71834287-71834306 | MsG0380015558.01.T01:intron | 30.0% | |
CTTTCAAAAATGAGTGCAAA+GGG | + | Chr3:71830340-71830359 | None:intergenic | 30.0% | |
GAATAGAAAAGGTGAATTTG+TGG | + | Chr3:71832773-71832792 | None:intergenic | 30.0% | |
GATCAAGGATTTACTTTCTT+GGG | - | Chr3:71832418-71832437 | MsG0380015558.01.T01:intron | 30.0% | |
GGTAATAAAATGAATAAGGC+AGG | - | Chr3:71830178-71830197 | MsG0380015558.01.T01:three_prime_UTR | 30.0% | |
GTGCCTAGTTTACAAAAATA+TGG | + | Chr3:71833711-71833730 | None:intergenic | 30.0% | |
TACAACTTTGCAGGAAAATT+AGG | - | Chr3:71830781-71830800 | MsG0380015558.01.T01:intron | 30.0% | |
TAGACATCAGATGAAGTAAT+TGG | + | Chr3:71834551-71834570 | None:intergenic | 30.0% | |
TATTAGGTTTAAACCCACTT+GGG | - | Chr3:71832023-71832042 | MsG0380015558.01.T01:intron | 30.0% | |
TCACGTTAATATAACTCAGT+TGG | - | Chr3:71831345-71831364 | MsG0380015558.01.T01:intron | 30.0% | |
TGGCCTAAAATAATACCAAA+TGG | + | Chr3:71832392-71832411 | None:intergenic | 30.0% | |
TTATTAGGTTTAAACCCACT+TGG | - | Chr3:71832022-71832041 | MsG0380015558.01.T01:intron | 30.0% | |
TTTCAAAAATGAGTGCAAAG+GGG | + | Chr3:71830339-71830358 | None:intergenic | 30.0% | |
! | AGGGTATTTGAGATTAATAG+AGG | + | Chr3:71833186-71833205 | None:intergenic | 30.0% |
! | GGGTATTTGAGATTAATAGA+GGG | + | Chr3:71833185-71833204 | None:intergenic | 30.0% |
! | GTCATCTTTCTTCATTTTAC+AGG | - | Chr3:71832889-71832908 | MsG0380015558.01.T01:intron | 30.0% |
! | TGATTTTATCAAACTCGTGA+TGG | + | Chr3:71834284-71834303 | None:intergenic | 30.0% |
! | TTCGGGTTATATAATTCGAA+CGG | - | Chr3:71833546-71833565 | MsG0380015558.01.T01:intron | 30.0% |
!! | ATTGATAACTAGCTCTACAT+AGG | + | Chr3:71830875-71830894 | None:intergenic | 30.0% |
!!! | ATTGCGTGTCCTATTTTTTT+CGG | - | Chr3:71833528-71833547 | MsG0380015558.01.T01:intron | 30.0% |
!!! | CGGATTTTAGAATCTGAATA+GGG | - | Chr3:71833611-71833630 | MsG0380015558.01.T01:intron | 30.0% |
!!! | CTGTTTTTGGAGAATAGAAA+AGG | + | Chr3:71832784-71832803 | None:intergenic | 30.0% |
!!! | TCGGATTTTAGAATCTGAAT+AGG | - | Chr3:71833610-71833629 | MsG0380015558.01.T01:intron | 30.0% |
AACTTGGATTCCATGTAGTT+GGG | - | Chr3:71830427-71830446 | MsG0380015558.01.T01:three_prime_UTR | 35.0% | |
AAGTCTAAACTCAATCTCCT+TGG | + | Chr3:71833302-71833321 | None:intergenic | 35.0% | |
AAGTGATGATCATACAAAGG+GGG | + | Chr3:71834130-71834149 | None:intergenic | 35.0% | |
AATAAGTATATCCCGTTGTC+GGG | + | Chr3:71830670-71830689 | None:intergenic | 35.0% | |
AATTAGGCCAAAGATGACAA+TGG | - | Chr3:71830797-71830816 | MsG0380015558.01.T01:intron | 35.0% | |
ACAGCTACTTCATTTGGAAA+AGG | + | Chr3:71833672-71833691 | None:intergenic | 35.0% | |
AGGAACACTCTTTCTAATGA+TGG | - | Chr3:71832853-71832872 | MsG0380015558.01.T01:intron | 35.0% | |
AGGACACGCAATAAATCAAT+AGG | + | Chr3:71833520-71833539 | None:intergenic | 35.0% | |
ATGATCATCACTTGTGCTTT+AGG | - | Chr3:71834137-71834156 | MsG0380015558.01.T01:intron | 35.0% | |
ATTAGGCCAAAGATGACAAT+GGG | - | Chr3:71830798-71830817 | MsG0380015558.01.T01:intron | 35.0% | |
CAAGTGATGATCATACAAAG+GGG | + | Chr3:71834131-71834150 | None:intergenic | 35.0% | |
CAATAAGTATATCCCGTTGT+CGG | + | Chr3:71830671-71830690 | None:intergenic | 35.0% | |
CACAAGTGATGATCATACAA+AGG | + | Chr3:71834133-71834152 | None:intergenic | 35.0% | |
CCAAAAACAGCACATAATTC+TGG | - | Chr3:71832794-71832813 | MsG0380015558.01.T01:intron | 35.0% | |
CCACACAAAAACATCTTCAA+AGG | + | Chr3:71834735-71834754 | None:intergenic | 35.0% | |
CCTTTCAAAAATGAGTGCAA+AGG | + | Chr3:71830341-71830360 | None:intergenic | 35.0% | |
CTGCAAAGTTGTAAGAAAAG+TGG | + | Chr3:71830774-71830793 | None:intergenic | 35.0% | |
GAACGCAAAATGACAATACA+CGG | + | Chr3:71834760-71834779 | None:intergenic | 35.0% | |
GAAGCATAGCAAAAGTGATT+GGG | - | Chr3:71832699-71832718 | MsG0380015558.01.T01:intron | 35.0% | |
GAATCAAATATGAGACCATG+AGG | + | Chr3:71832091-71832110 | None:intergenic | 35.0% | |
GACGTATCAGATATTAACTG+TGG | + | Chr3:71833365-71833384 | None:intergenic | 35.0% | |
GGAACACTCTTTCTAATGAT+GGG | - | Chr3:71832854-71832873 | MsG0380015558.01.T01:intron | 35.0% | |
GGACACGCAATAAATCAATA+GGG | + | Chr3:71833519-71833538 | None:intergenic | 35.0% | |
GGCACCAATTAAGCATATTA+AGG | + | Chr3:71833060-71833079 | None:intergenic | 35.0% | |
GTAAATCCTTGATCTATCAC+TGG | + | Chr3:71832412-71832431 | None:intergenic | 35.0% | |
GTCTCATATTTGATTCTCTC+TGG | - | Chr3:71832095-71832114 | MsG0380015558.01.T01:intron | 35.0% | |
TAACTTGGATTCCATGTAGT+TGG | - | Chr3:71830426-71830445 | MsG0380015558.01.T01:three_prime_UTR | 35.0% | |
TAGTGATCATCACTTGTGTT+CGG | - | Chr3:71834242-71834261 | MsG0380015558.01.T01:intron | 35.0% | |
TTCAAAAATGAGTGCAAAGG+GGG | + | Chr3:71830338-71830357 | None:intergenic | 35.0% | |
TTCACAACATGACAGACAAA+TGG | - | Chr3:71833320-71833339 | MsG0380015558.01.T01:intron | 35.0% | |
TTTCAGGGAATAATTACCTC+AGG | - | Chr3:71834038-71834057 | MsG0380015558.01.T01:intron | 35.0% | |
! | CACTTTTCTTACAACTTTGC+AGG | - | Chr3:71830772-71830791 | MsG0380015558.01.T01:intron | 35.0% |
! | CGAAACATTCTAACGTGTTT+TGG | + | Chr3:71833593-71833612 | None:intergenic | 35.0% |
! | TTTACATTGGTTGAGGAATG+TGG | + | Chr3:71834886-71834905 | None:intergenic | 35.0% |
! | TTTTGCATAGGGTCATAAGA+GGG | + | Chr3:71831768-71831787 | None:intergenic | 35.0% |
!! | AACATTCTAACGTGTTTTGG+AGG | + | Chr3:71833590-71833609 | None:intergenic | 35.0% |
!! | CCTTTGAAGATGTTTTTGTG+TGG | - | Chr3:71834732-71834751 | MsG0380015558.01.T01:CDS | 35.0% |
!! | CCTTTGCACTCATTTTTGAA+AGG | - | Chr3:71830338-71830357 | MsG0380015558.01.T01:three_prime_UTR | 35.0% |
!! | TTACTGATTCACTTTGTGTC+TGG | + | Chr3:71832284-71832303 | None:intergenic | 35.0% |
!!! | CCAGAATTATGTGCTGTTTT+TGG | + | Chr3:71832797-71832816 | None:intergenic | 35.0% |
!!! | CGTGTTTTGGAGGTTTTTAT+AGG | + | Chr3:71833580-71833599 | None:intergenic | 35.0% |
!!! | TTGCGTGTCCTATTTTTTTC+GGG | - | Chr3:71833529-71833548 | MsG0380015558.01.T01:intron | 35.0% |
AAGACACCCATTGTCATCTT+TGG | + | Chr3:71830807-71830826 | None:intergenic | 40.0% | |
ACACGCAAACTCTCAAACAT+TGG | - | Chr3:71832825-71832844 | MsG0380015558.01.T01:intron | 40.0% | |
ACTATATGGTCCTCTCTACA+CGG | - | Chr3:71833157-71833176 | MsG0380015558.01.T01:intron | 40.0% | |
AGCGTATTATGTGCAAGGAT+TGG | - | Chr3:71834064-71834083 | MsG0380015558.01.T01:intron | 40.0% | |
ATAGACCCACTGCAATAATC+AGG | + | Chr3:71834433-71834452 | None:intergenic | 40.0% | |
ATTCATTCCCATGTTGAGAC+TGG | + | Chr3:71830266-71830285 | None:intergenic | 40.0% | |
CAATGTTTCCAAGGAGTGAA+TGG | - | Chr3:71830637-71830656 | MsG0380015558.01.T01:intron | 40.0% | |
CACATAATACGCTATTCCTG+AGG | + | Chr3:71834057-71834076 | None:intergenic | 40.0% | |
CACGCAAACTCTCAAACATT+GGG | - | Chr3:71832826-71832845 | MsG0380015558.01.T01:intron | 40.0% | |
CACGCAATAAATCAATAGGG+TGG | + | Chr3:71833516-71833535 | None:intergenic | 40.0% | |
CGAAGCATAGCAAAAGTGAT+TGG | - | Chr3:71832698-71832717 | MsG0380015558.01.T01:intron | 40.0% | |
CTTGGGGATGCAATATACAT+CGG | - | Chr3:71832435-71832454 | MsG0380015558.01.T01:intron | 40.0% | |
GAAAATTACGGCTAGCACAA+AGG | + | Chr3:71832503-71832522 | None:intergenic | 40.0% | |
GAACACAAGTGATGATCACT+AGG | + | Chr3:71834243-71834262 | None:intergenic | 40.0% | |
GACATTAGTAACCTTTGCAG+GGG | - | Chr3:71832721-71832740 | MsG0380015558.01.T01:intron | 40.0% | |
GGAATAGCGTATTATGTGCA+AGG | - | Chr3:71834059-71834078 | MsG0380015558.01.T01:intron | 40.0% | |
GGACATTAGTAACCTTTGCA+GGG | - | Chr3:71832720-71832739 | MsG0380015558.01.T01:intron | 40.0% | |
GGTTGGGACTTTAGACTATA+TGG | - | Chr3:71833143-71833162 | MsG0380015558.01.T01:intron | 40.0% | |
GTTGGGATACTCTACATGTA+TGG | - | Chr3:71830444-71830463 | MsG0380015558.01.T01:exon | 40.0% | |
TAACGGTGGCACTTCAATTT+GGG | - | Chr3:71830212-71830231 | MsG0380015558.01.T01:three_prime_UTR | 40.0% | |
TAGACCCACTGCAATAATCA+GGG | + | Chr3:71834432-71834451 | None:intergenic | 40.0% | |
TGCGCGAGAAACTTATAAAG+TGG | - | Chr3:71833634-71833653 | MsG0380015558.01.T01:intron | 40.0% | |
TTAACGGTGGCACTTCAATT+TGG | - | Chr3:71830211-71830230 | MsG0380015558.01.T01:three_prime_UTR | 40.0% | |
TTAGAAGTTACCTTCCCAAG+TGG | + | Chr3:71834187-71834206 | None:intergenic | 40.0% | |
TTTAGGCCAGTGATAGATCA+AGG | - | Chr3:71832403-71832422 | MsG0380015558.01.T01:intron | 40.0% | |
TTTGAGTGTGTTCATCCTCA+TGG | - | Chr3:71832073-71832092 | MsG0380015558.01.T01:intron | 40.0% | |
! | AGGAGCATACATATTCTCCA+TGG | - | Chr3:71830240-71830259 | MsG0380015558.01.T01:three_prime_UTR | 40.0% |
! | CTTTTGCATAGGGTCATAAG+AGG | + | Chr3:71831769-71831788 | None:intergenic | 40.0% |
! | TAGTCTAAAGTCCCAACCAA+TGG | + | Chr3:71833141-71833160 | None:intergenic | 40.0% |
! | TCAGTTTGCTTCATTGCAAC+TGG | + | Chr3:71834518-71834537 | None:intergenic | 40.0% |
! | TGTAGAGTATCCCAACTACA+TGG | + | Chr3:71830440-71830459 | None:intergenic | 40.0% |
! | TTGTGCTAGCCGTAATTTTC+AGG | - | Chr3:71832503-71832522 | MsG0380015558.01.T01:CDS | 40.0% |
!! | CTTTCTAATGATGGGTTGTG+TGG | - | Chr3:71832862-71832881 | MsG0380015558.01.T01:intron | 40.0% |
!! | GATAATGGCGCTTGCATTTT+TGG | - | Chr3:71830833-71830852 | MsG0380015558.01.T01:CDS | 40.0% |
!! | GTTGATAGTGACATTTCTGC+TGG | + | Chr3:71833038-71833057 | None:intergenic | 40.0% |
!! | TCTTGGTAACGTGTGTTCTA+AGG | - | Chr3:71832567-71832586 | MsG0380015558.01.T01:CDS | 40.0% |
!!! | AGTTTTAAGTCAACACCACG+AGG | + | Chr3:71832053-71832072 | None:intergenic | 40.0% |
AAATAGGATGACCTCCAACG+GGG | - | Chr3:71833394-71833413 | MsG0380015558.01.T01:intron | 45.0% | |
AATGGTGAGAATCCCGACAA+CGG | - | Chr3:71830655-71830674 | MsG0380015558.01.T01:intron | 45.0% | |
ACTCTCAAACATTGGGTCTC+AGG | - | Chr3:71832833-71832852 | MsG0380015558.01.T01:intron | 45.0% | |
AGGTTTAAACCCACTTGGGT+TGG | - | Chr3:71832027-71832046 | MsG0380015558.01.T01:intron | 45.0% | |
AGTGCCACCGTTAACACATA+AGG | + | Chr3:71830205-71830224 | None:intergenic | 45.0% | |
AGTGGAGTTGCTCTGCAAAA+AGG | + | Chr3:71834169-71834188 | None:intergenic | 45.0% | |
GAAATAGGATGACCTCCAAC+GGG | - | Chr3:71833393-71833412 | MsG0380015558.01.T01:intron | 45.0% | |
GAGTTGCTCTGCAAAAAGGA+AGG | + | Chr3:71834165-71834184 | None:intergenic | 45.0% | |
GATTCTCACCATTCACTCCT+TGG | + | Chr3:71830648-71830667 | None:intergenic | 45.0% | |
GCTAGCACAAAGGTAACAGA+AGG | + | Chr3:71832493-71832512 | None:intergenic | 45.0% | |
GGAAATAGGATGACCTCCAA+CGG | - | Chr3:71833392-71833411 | MsG0380015558.01.T01:intron | 45.0% | |
GGGACATTAGTAACCTTTGC+AGG | - | Chr3:71832719-71832738 | MsG0380015558.01.T01:intron | 45.0% | |
GGGTCTATATTCTGTGGTGT+GGG | - | Chr3:71834445-71834464 | MsG0380015558.01.T01:intron | 45.0% | |
GGTCTATATTCTGTGGTGTG+GGG | - | Chr3:71834446-71834465 | MsG0380015558.01.T01:intron | 45.0% | |
TGACAATGGGTGTCTTTGTG+CGG | - | Chr3:71830811-71830830 | MsG0380015558.01.T01:intron | 45.0% | |
TGCAGTGGGTCTATATTCTG+TGG | - | Chr3:71834439-71834458 | MsG0380015558.01.T01:intron | 45.0% | |
TGCTTCATTGCAACTGGTGA+TGG | + | Chr3:71834512-71834531 | None:intergenic | 45.0% | |
TGGGTCTATATTCTGTGGTG+TGG | - | Chr3:71834444-71834463 | MsG0380015558.01.T01:intron | 45.0% | |
TTTGCAGAGCAACTCCACTT+GGG | - | Chr3:71834170-71834189 | MsG0380015558.01.T01:intron | 45.0% | |
! | ACATTGGTTGAGGAATGTGG+AGG | + | Chr3:71834883-71834902 | None:intergenic | 45.0% |
! | GCACTTCAATTTGGGTTTGC+AGG | - | Chr3:71830220-71830239 | MsG0380015558.01.T01:three_prime_UTR | 45.0% |
! | TTTTGCAGAGCAACTCCACT+TGG | - | Chr3:71834169-71834188 | MsG0380015558.01.T01:intron | 45.0% |
!! | TAATGATGGGTTGTGTGGCT+TGG | - | Chr3:71832867-71832886 | MsG0380015558.01.T01:intron | 45.0% |
!! | TCACTCTGGTCTTGAGGTTT+GGG | - | Chr3:71833115-71833134 | MsG0380015558.01.T01:intron | 45.0% |
!! | TTCATTGCAACTGGTGATGG+TGG | + | Chr3:71834509-71834528 | None:intergenic | 45.0% |
!! | TTACATTATATATATATATA+TGG | - | Chr3:71831376-71831395 | MsG0380015558.01.T01:intron | 5.0% |
AAATGAGTGCAAAGGGGGCA+AGG | + | Chr3:71830333-71830352 | None:intergenic | 50.0% | |
AATGAGTGCAAAGGGGGCAA+GGG | + | Chr3:71830332-71830351 | None:intergenic | 50.0% | |
AGATGGTCCTGTCACAGACA+CGG | - | Chr3:71834304-71834323 | MsG0380015558.01.T01:intron | 50.0% | |
ATGGTGAGAATCCCGACAAC+GGG | - | Chr3:71830656-71830675 | MsG0380015558.01.T01:intron | 50.0% | |
ATTTGCAATAGGCTCCCCGT+TGG | + | Chr3:71833411-71833430 | None:intergenic | 50.0% | |
CATCATCAATGCCCCTGCAA+AGG | + | Chr3:71832735-71832754 | None:intergenic | 50.0% | |
GAGGGACTCAATTAGACGCT+TGG | + | Chr3:71831750-71831769 | None:intergenic | 50.0% | |
GGAGCCCTGATTATTGCAGT+GGG | - | Chr3:71834425-71834444 | MsG0380015558.01.T01:intron | 50.0% | |
GGGTGTCTTTGTGCGGATAA+TGG | - | Chr3:71830818-71830837 | MsG0380015558.01.T01:intron | 50.0% | |
TCAATGTCCGTGTCTGTGAC+AGG | + | Chr3:71834314-71834333 | None:intergenic | 50.0% | |
TCCATGGCCAGTCTCAACAT+GGG | - | Chr3:71830256-71830275 | MsG0380015558.01.T01:three_prime_UTR | 50.0% | |
TGCCATGCAAACTAGTGTGG+TGG | - | Chr3:71833076-71833095 | MsG0380015558.01.T01:intron | 50.0% | |
TGGAGCCCTGATTATTGCAG+TGG | - | Chr3:71834424-71834443 | MsG0380015558.01.T01:intron | 50.0% | |
TTCATTGCTGAGCGTCACTC+TGG | - | Chr3:71833101-71833120 | MsG0380015558.01.T01:intron | 50.0% | |
TTGAGGTTTGGGCCATTGGT+TGG | - | Chr3:71833126-71833145 | MsG0380015558.01.T01:intron | 50.0% | |
! | AGGGCCTTATGTGTTAACGG+TGG | - | Chr3:71830198-71830217 | MsG0380015558.01.T01:three_prime_UTR | 50.0% |
! | GGCAGGGCCTTATGTGTTAA+CGG | - | Chr3:71830195-71830214 | MsG0380015558.01.T01:three_prime_UTR | 50.0% |
! | TGAGGTTTGGGCCATTGGTT+GGG | - | Chr3:71833127-71833146 | MsG0380015558.01.T01:intron | 50.0% |
! | TGCCACCACACTAGTTTGCA+TGG | + | Chr3:71833081-71833100 | None:intergenic | 50.0% |
!! | ATAGAGGGTACCGTGTAGAG+AGG | + | Chr3:71833170-71833189 | None:intergenic | 50.0% |
!! | GTCACTCTGGTCTTGAGGTT+TGG | - | Chr3:71833114-71833133 | MsG0380015558.01.T01:intron | 50.0% |
!! | TGGTGCCATGCAAACTAGTG+TGG | - | Chr3:71833073-71833092 | MsG0380015558.01.T01:intron | 50.0% |
CAGAGCAACTCCACTTGGGA+AGG | - | Chr3:71834174-71834193 | MsG0380015558.01.T01:intron | 55.0% | |
CTCCATGGCCAGTCTCAACA+TGG | - | Chr3:71830255-71830274 | MsG0380015558.01.T01:three_prime_UTR | 55.0% | |
GGTCTTGAGGTTTGGGCCAT+TGG | - | Chr3:71833122-71833141 | MsG0380015558.01.T01:intron | 55.0% | |
! | TCCCATGTTGAGACTGGCCA+TGG | + | Chr3:71830260-71830279 | None:intergenic | 55.0% |
!! | GCAACTGGTGATGGTGGCAT+AGG | + | Chr3:71834503-71834522 | None:intergenic | 55.0% |
!! | TGAGCGTCACTCTGGTCTTG+AGG | - | Chr3:71833109-71833128 | MsG0380015558.01.T01:intron | 55.0% |
ACCACGAGGCCAACCCAAGT+GGG | + | Chr3:71832039-71832058 | None:intergenic | 60.0% | |
TGCAATAGGCTCCCCGTTGG+AGG | + | Chr3:71833408-71833427 | None:intergenic | 60.0% | |
CACCACGAGGCCAACCCAAG+TGG | + | Chr3:71832040-71832059 | None:intergenic | 65.0% | |
!! | ACCCACTTGGGTTGGCCTCG+TGG | - | Chr3:71832035-71832054 | MsG0380015558.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 71830096 | 71834925 | 71830096 | ID=MsG0380015558.01;Name=MsG0380015558.01 |
Chr3 | mRNA | 71830096 | 71834925 | 71830096 | ID=MsG0380015558.01.T01;Parent=MsG0380015558.01;Name=MsG0380015558.01.T01;_AED=0.37;_eAED=0.37;_QI=55|0.6|0.83|1|1|1|6|354|284 |
Chr3 | exon | 71830096 | 71830603 | 71830096 | ID=MsG0380015558.01.T01:exon:23867;Parent=MsG0380015558.01.T01 |
Chr3 | exon | 71830826 | 71830977 | 71830826 | ID=MsG0380015558.01.T01:exon:23866;Parent=MsG0380015558.01.T01 |
Chr3 | exon | 71831843 | 71832007 | 71831843 | ID=MsG0380015558.01.T01:exon:23865;Parent=MsG0380015558.01.T01 |
Chr3 | exon | 71832294 | 71832351 | 71832294 | ID=MsG0380015558.01.T01:exon:23864;Parent=MsG0380015558.01.T01 |
Chr3 | exon | 71832497 | 71832613 | 71832497 | ID=MsG0380015558.01.T01:exon:23863;Parent=MsG0380015558.01.T01 |
Chr3 | exon | 71834662 | 71834925 | 71834662 | ID=MsG0380015558.01.T01:exon:23862;Parent=MsG0380015558.01.T01 |
Chr3 | five_prime_UTR | 71834871 | 71834925 | 71834871 | ID=MsG0380015558.01.T01:five_prime_utr;Parent=MsG0380015558.01.T01 |
Chr3 | CDS | 71834662 | 71834870 | 71834662 | ID=MsG0380015558.01.T01:cds;Parent=MsG0380015558.01.T01 |
Chr3 | CDS | 71832497 | 71832613 | 71832497 | ID=MsG0380015558.01.T01:cds;Parent=MsG0380015558.01.T01 |
Chr3 | CDS | 71832294 | 71832351 | 71832294 | ID=MsG0380015558.01.T01:cds;Parent=MsG0380015558.01.T01 |
Chr3 | CDS | 71831843 | 71832007 | 71831843 | ID=MsG0380015558.01.T01:cds;Parent=MsG0380015558.01.T01 |
Chr3 | CDS | 71830826 | 71830977 | 71830826 | ID=MsG0380015558.01.T01:cds;Parent=MsG0380015558.01.T01 |
Chr3 | CDS | 71830450 | 71830603 | 71830450 | ID=MsG0380015558.01.T01:cds;Parent=MsG0380015558.01.T01 |
Chr3 | three_prime_UTR | 71830096 | 71830449 | 71830096 | ID=MsG0380015558.01.T01:three_prime_utr;Parent=MsG0380015558.01.T01 |
Gene Sequence |
Protein sequence |