AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015567.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015567.01.T01 MTR_3g072670 97.528 445 11 0 1 445 1 445 0.0 899
MsG0380015567.01.T01 MTR_3g072680 83.709 399 58 1 54 445 4 402 0.0 712
MsG0380015567.01.T01 MTR_3g072690 71.935 367 49 3 79 445 1 313 0.0 524
MsG0380015567.01.T01 MTR_1g087760 39.594 394 222 5 63 443 4 394 6.75e-87 271
MsG0380015567.01.T01 MTR_7g106830 28.509 456 289 13 19 443 15 464 1.50e-51 181
MsG0380015567.01.T01 MTR_8g091280 28.603 451 291 12 14 443 26 466 2.17e-50 177
MsG0380015567.01.T01 MTR_1807s0010 28.272 382 252 8 76 441 19 394 3.53e-34 132
MsG0380015567.01.T01 MTR_8g061360 24.194 372 255 9 89 440 43 407 1.28e-22 99.8
MsG0380015567.01.T01 MTR_4g011820 25.862 406 254 19 63 445 6 387 1.82e-21 96.3
MsG0380015567.01.T01 MTR_2g090615 25.414 362 245 12 96 440 57 410 3.44e-21 95.5
MsG0380015567.01.T01 MTR_6g033540 26.645 304 182 14 138 431 101 373 2.05e-14 75.1
MsG0380015567.01.T01 MTR_6g033540 26.316 304 183 14 138 431 131 403 2.18e-14 75.1
MsG0380015567.01.T01 MTR_8g098930 24.069 349 224 14 123 440 94 432 7.64e-14 73.6
MsG0380015567.01.T01 MTR_3g103550 21.774 372 246 13 98 440 69 424 4.97e-12 68.2
MsG0380015567.01.T01 MTR_4g097540 23.467 375 240 16 99 440 71 431 7.49e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015567.01.T01 AT1G77670 79.487 429 75 4 20 445 20 438 0.0 714
MsG0380015567.01.T01 AT2G22250 29.639 415 265 12 47 443 14 419 5.68e-54 186
MsG0380015567.01.T01 AT2G22250 29.639 415 265 12 47 443 61 466 1.32e-53 186
MsG0380015567.01.T01 AT2G22250 29.639 415 265 12 47 443 61 466 1.32e-53 186
MsG0380015567.01.T01 AT2G20610 25.722 381 249 14 80 440 67 433 7.71e-25 107
MsG0380015567.01.T01 AT5G36160 25.867 375 245 14 89 440 45 409 8.11e-25 106
MsG0380015567.01.T01 AT4G28410 23.936 376 261 10 84 440 66 435 1.47e-23 102
MsG0380015567.01.T01 AT2G24850 26.176 340 228 12 117 440 85 417 4.78e-23 101
MsG0380015567.01.T01 AT2G20610 25.141 354 236 13 80 413 67 411 3.20e-22 99.0
MsG0380015567.01.T01 AT4G28420 23.514 387 262 14 81 445 62 436 4.92e-21 95.5
MsG0380015567.01.T01 AT5G53970 23.861 373 255 11 89 440 36 400 1.00e-20 94.4
MsG0380015567.01.T01 AT4G28410 22.841 359 256 10 84 423 66 422 2.33e-20 93.2
MsG0380015567.01.T01 AT4G23590 24.793 363 228 11 105 440 58 402 4.27e-19 89.4
MsG0380015567.01.T01 AT1G80360 22.513 382 261 11 80 445 24 386 1.19e-18 87.8
MsG0380015567.01.T01 AT1G80360 22.513 382 261 11 80 445 24 386 1.19e-18 87.8
MsG0380015567.01.T01 AT1G80360 22.513 382 261 11 80 445 24 386 1.19e-18 87.8
MsG0380015567.01.T01 AT1G80360 22.513 382 261 11 80 445 24 386 1.19e-18 87.8
MsG0380015567.01.T01 AT4G23600 25.138 362 228 13 105 440 58 402 1.46e-17 84.7
MsG0380015567.01.T01 AT4G28420 23.556 225 164 6 81 302 62 281 1.47e-17 84.7
MsG0380015567.01.T01 AT4G23600 25.161 310 199 9 152 440 1 298 2.26e-16 80.1
MsG0380015567.01.T01 AT4G23600 25.076 331 210 12 105 409 58 376 3.81e-15 77.4
MsG0380015567.01.T01 AT5G51690 23.754 341 232 13 124 441 30 365 2.54e-13 71.6
MsG0380015567.01.T01 AT5G51690 23.754 341 232 13 124 441 153 488 3.05e-13 72.0
MsG0380015567.01.T01 AT3G49700 23.387 372 240 15 99 441 71 426 4.13e-13 71.6
MsG0380015567.01.T01 AT4G08040 25.159 314 209 11 149 440 111 420 1.30e-12 69.7
MsG0380015567.01.T01 AT2G13810 22.823 333 197 12 121 416 106 415 4.68e-11 65.1

Find 147 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACCTACATTTCAATTTC+TGG 0.052999 3:+71941714 None:intergenic
AGGTCACACGGCCCCGTTTC+TGG 0.184090 3:+71944132 None:intergenic
ACTAGATTCTTTCCCTCTTC+TGG 0.199903 3:+71941867 None:intergenic
AGCAATGAGAGATGGGAATT+TGG 0.202883 3:+71943942 None:intergenic
TATGGCAAAGAGAGCTATTT+TGG 0.213807 3:-71942057 MsG0380015567.01.T01:CDS
GCAATGAGAGATGGGAATTT+GGG 0.255815 3:+71943943 None:intergenic
AGCCATCATAACTGAGATTC+AGG 0.257470 3:+71941608 None:intergenic
GCAATTGCTGCAACTGTGTT+AGG 0.312345 3:-71942632 MsG0380015567.01.T01:CDS
GCAAAGATGAAGGAACTCTT+AGG 0.314890 3:-71941830 MsG0380015567.01.T01:CDS
AAGTCTGGACCATCAAAATT+TGG 0.315231 3:+71942821 None:intergenic
TGATAAGTTGGCATTTGATA+TGG 0.319352 3:-71942324 MsG0380015567.01.T01:CDS
TTGCATTGAGAACGATGTTC+TGG 0.330372 3:-71942366 MsG0380015567.01.T01:CDS
AATCAGTATGCTAGGGGTTA+TGG 0.333698 3:-71942758 MsG0380015567.01.T01:CDS
CGGTCCTTCCTGCCAGAAAC+GGG 0.337232 3:-71944144 MsG0380015567.01.T01:five_prime_UTR
ACAAAGTAGGTTCCACTAGA+TGG 0.338459 3:+71941999 None:intergenic
TGACAATATCACTCCTTTGC+AGG 0.339654 3:-71943890 MsG0380015567.01.T01:intron
GCTTCATAAGAATCATAAAA+AGG 0.341159 3:+71942572 None:intergenic
TCCTTGACTGGATGGAAAAT+CGG 0.347205 3:-71942227 MsG0380015567.01.T01:CDS
TGATGGCAAGCATACTCATT+TGG 0.355864 3:+71942876 None:intergenic
CGGTGACAATGAACTCTTTA+GGG 0.355958 3:-71942259 MsG0380015567.01.T01:CDS
ATGGCTGGTGCAAAAGTAAA+AGG 0.357091 3:-71942539 MsG0380015567.01.T01:CDS
GCTGCTTCCTTTACAAAGTC+TGG 0.358827 3:+71942806 None:intergenic
TGAACTAAAGAGGGACTATA+TGG 0.367867 3:-71942075 MsG0380015567.01.T01:CDS
GTTGTAGATCACACCCCTTT+TGG 0.368199 3:-71941975 MsG0380015567.01.T01:CDS
ATTGAAGGCTGTTGGCTTCA+AGG 0.369387 3:-71942027 MsG0380015567.01.T01:CDS
GATGGCAAGCATACTCATTT+GGG 0.373899 3:+71942877 None:intergenic
ATTTCAATTGCTTCTTTGCC+TGG 0.392118 3:-71942296 MsG0380015567.01.T01:CDS
AGTTCAGTGTAATAAGAATC+TGG 0.396562 3:+71942092 None:intergenic
AAGCAGCTATTCAAGCAATC+AGG 0.397850 3:-71942790 MsG0380015567.01.T01:CDS
CATCTTTGCAGAAAGTAAAT+CGG 0.399884 3:+71941844 None:intergenic
ATTAATAGCTCCATGTTTGA+TGG 0.402263 3:+71942859 None:intergenic
CCCCTGAATCTCAGTTATGA+TGG 0.404744 3:-71941610 MsG0380015567.01.T01:three_prime_UTR
TGGAGCTATTAATCTTGGTC+AGG 0.405859 3:-71942849 MsG0380015567.01.T01:CDS
AAGGAGATAACTGTTACGTC+TGG 0.407628 3:-71942665 MsG0380015567.01.T01:CDS
ACGGTGACAATGAACTCTTT+AGG 0.411645 3:-71942260 MsG0380015567.01.T01:CDS
TCGGTCCTTCCTGCCAGAAA+CGG 0.417975 3:-71944145 MsG0380015567.01.T01:five_prime_UTR
GGGAAGACATTCTCCTTGAC+TGG 0.421436 3:-71942239 MsG0380015567.01.T01:CDS
CGCAGACTTCAACTCTTCAA+TGG 0.424388 3:+71942484 None:intergenic
AAGTCAGAAAGGAATCAAAT+TGG 0.429177 3:-71944097 MsG0380015567.01.T01:five_prime_UTR
GATTTGAGGTTGCGAAAGTA+AGG 0.432698 3:+71942150 None:intergenic
GTGAGGGGTATTTAAAAGAA+TGG 0.436908 3:+71942442 None:intergenic
AAACATGGAGCTATTAATCT+TGG 0.439056 3:-71942854 MsG0380015567.01.T01:CDS
ATTGAAATGAATAGTAGAAA+AGG 0.440172 3:+71943996 None:intergenic
TTCAATGAATAATAGTTTGA+AGG 0.440260 3:-71941577 MsG0380015567.01.T01:three_prime_UTR
TTTACTTTCTGCAAAGATGA+AGG 0.449767 3:-71941840 MsG0380015567.01.T01:CDS
ATCTAGTGGAACCTACTTTG+TGG 0.453282 3:-71941997 MsG0380015567.01.T01:CDS
AGCCCACTGCATAGGATTTG+AGG 0.459195 3:+71942136 None:intergenic
GAGGAGAGAATGTGTGCAGC+AGG 0.461446 3:+71944047 None:intergenic
ACCGTCCGCTCGAACATTCC+AGG 0.462597 3:+71942278 None:intergenic
GAAATGGCAATGTTGAGGTC+TGG 0.462695 3:+71942731 None:intergenic
TGAAAATACAAGGCTTAAAA+CGG 0.465453 3:+71941527 None:intergenic
CTTATTACACTGAACTAAAG+AGG 0.466700 3:-71942085 MsG0380015567.01.T01:CDS
AATACCCCTCACAATCCTAC+TGG 0.467702 3:-71942431 MsG0380015567.01.T01:CDS
TGACTGGATGGAAAATCGGC+TGG 0.469672 3:-71942223 MsG0380015567.01.T01:CDS
CTTAACATGGGGAGTGCGAC+AGG 0.474775 3:-71942183 MsG0380015567.01.T01:CDS
TTGAAATGAATAGTAGAAAA+GGG 0.480865 3:+71943997 None:intergenic
GCCTGGAATGTTCGAGCGGA+CGG 0.481257 3:-71942279 MsG0380015567.01.T01:CDS
TCAATGAATAATAGTTTGAA+GGG 0.487850 3:-71941576 MsG0380015567.01.T01:three_prime_UTR
TCAATGGGTAGAGCAAAATC+TGG 0.488716 3:+71942500 None:intergenic
AACTGTTACGTCTGGGTGCA+CGG 0.488914 3:-71942657 MsG0380015567.01.T01:CDS
GAAGCTACTTTATCCATGGC+TGG 0.489236 3:-71942554 MsG0380015567.01.T01:CDS
AAGGGTAACGATTTATAAGA+AGG 0.493919 3:+71944015 None:intergenic
CCAGAAATTGAAATGTAGGT+AGG 0.505772 3:-71941714 MsG0380015567.01.T01:three_prime_UTR
TTATGAAGCTACTTTATCCA+TGG 0.508156 3:-71942558 MsG0380015567.01.T01:CDS
GTTGAAGGATTGAAGGCTGT+TGG 0.509741 3:-71942035 MsG0380015567.01.T01:CDS
AACAGCAGTGGACATGGTGG+CGG 0.511768 3:+71943918 None:intergenic
ACGGGAATAATCAGTATGCT+AGG 0.513864 3:-71942766 MsG0380015567.01.T01:CDS
CACACGGCCCCGTTTCTGGC+AGG 0.515731 3:+71944136 None:intergenic
TTATATATCATGAAAATACA+AGG 0.515786 3:+71941517 None:intergenic
TCTAGTTAAGGAGGTGGGAG+TGG 0.521686 3:-71941922 MsG0380015567.01.T01:CDS
CAAAGTAGGTTCCACTAGAT+GGG 0.523226 3:+71942000 None:intergenic
GCAGACTTCAACTCTTCAAT+GGG 0.524614 3:+71942485 None:intergenic
TGTTAAGTGTGGAGGTGCTA+TGG 0.525056 3:+71942199 None:intergenic
TGATGAAGTGTATGATAAGT+TGG 0.525718 3:-71942336 MsG0380015567.01.T01:CDS
TAGCACCTCCACACTTAACA+TGG 0.526143 3:-71942196 MsG0380015567.01.T01:CDS
TGAATATCTAGTTAAGGAGG+TGG 0.528392 3:-71941928 MsG0380015567.01.T01:CDS
ATCTTTCCAGTAGGATTGTG+AGG 0.528488 3:+71942425 None:intergenic
AGACATTCTCCTTGACTGGA+TGG 0.528851 3:-71942235 MsG0380015567.01.T01:CDS
GACTGGATGGAAAATCGGCT+GGG 0.530502 3:-71942222 MsG0380015567.01.T01:CDS
GGAGAGAATGTGTGCAGCAG+GGG 0.532845 3:+71944049 None:intergenic
CGCGAAGCATTAAGTCAGAA+AGG 0.535158 3:-71944108 MsG0380015567.01.T01:five_prime_UTR
CAAAGATGAAGGAACTCTTA+GGG 0.536161 3:-71941829 MsG0380015567.01.T01:CDS
CTATTCAAGCAATCAGGGAC+GGG 0.538633 3:-71942784 MsG0380015567.01.T01:CDS
CTTACTTAGCTCAACAGTCT+CGG 0.541753 3:-71941671 MsG0380015567.01.T01:three_prime_UTR
TATTATGTTTCACTCTCCGT+CGG 0.549348 3:-71944164 MsG0380015567.01.T01:five_prime_UTR
GTGGCGGCAGCAATGAGAGA+TGG 0.550089 3:+71943934 None:intergenic
GGAGCTATTAATCTTGGTCA+GGG 0.551954 3:-71942848 MsG0380015567.01.T01:CDS
AGTATGCTTGCCATCAAACA+TGG 0.557282 3:-71942869 MsG0380015567.01.T01:CDS
CGGGAATAATCAGTATGCTA+GGG 0.561122 3:-71942765 MsG0380015567.01.T01:CDS
TGGCGGCAGCAATGAGAGAT+GGG 0.562805 3:+71943935 None:intergenic
CAATGAGAGATGGGAATTTG+GGG 0.563563 3:+71943944 None:intergenic
GCTAATTGTAGACCCTGAAA+AGG 0.564062 3:-71942684 MsG0380015567.01.T01:CDS
AAACACAATAACCTCATCAC+CGG 0.564533 3:+71942598 None:intergenic
TTATTACACTGAACTAAAGA+GGG 0.567688 3:-71942084 MsG0380015567.01.T01:CDS
GTAAAACACACTGGTAGGAA+TGG 0.568216 3:+71941896 None:intergenic
CTCAATGCAAAGAGAAGCGA+TGG 0.568255 3:+71942379 None:intergenic
ACTGCAGCAGCCCACTGCAT+AGG 0.569164 3:+71942128 None:intergenic
GTGTTAGGATTGATAAATCC+CGG 0.569928 3:-71942617 MsG0380015567.01.T01:CDS
GCCATCATAACTGAGATTCA+GGG 0.571734 3:+71941609 None:intergenic
TGATGGTCCAGACTTTGTAA+AGG 0.572265 3:-71942813 MsG0380015567.01.T01:CDS
TAAATAGGATGAACCTGCAA+AGG 0.572640 3:+71943877 None:intergenic
CGCACTCCCCATGTTAAGTG+TGG 0.576137 3:+71942188 None:intergenic
TGAGTGAACATCTTTCCAGT+AGG 0.577372 3:+71942416 None:intergenic
CGGCCCCGTTTCTGGCAGGA+AGG 0.578457 3:+71944140 None:intergenic
AGCAGCTATTCAAGCAATCA+GGG 0.579865 3:-71942789 MsG0380015567.01.T01:CDS
GCTATTCAAGCAATCAGGGA+CGG 0.581164 3:-71942785 MsG0380015567.01.T01:CDS
GTGATCTACAACCACAAAGT+AGG 0.583391 3:+71941986 None:intergenic
AGGAGAGAATGTGTGCAGCA+GGG 0.589039 3:+71944048 None:intergenic
TGGAAAGATGTTCACTCAAG+AGG 0.589240 3:-71942411 MsG0380015567.01.T01:CDS
AACCTCAAATCCTATGCAGT+GGG 0.590094 3:-71942138 MsG0380015567.01.T01:CDS
ATGAGAGATGGGAATTTGGG+GGG 0.590901 3:+71943946 None:intergenic
TATAAGAAGGAATGAATCTG+AGG 0.591102 3:+71944028 None:intergenic
TCTTTCCAGTAGGATTGTGA+GGG 0.595542 3:+71942426 None:intergenic
AGTTAAGGAGGTGGGAGTGG+TGG 0.596096 3:-71941919 MsG0380015567.01.T01:CDS
TTGTGAATATCTAGTTAAGG+AGG 0.600582 3:-71941931 MsG0380015567.01.T01:CDS
AGGAGATAACTGTTACGTCT+GGG 0.605043 3:-71942664 MsG0380015567.01.T01:CDS
AGCACCTCCACACTTAACAT+GGG 0.605376 3:-71942195 MsG0380015567.01.T01:CDS
GGCTGCTGTTGAGAGAATGA+AGG 0.606830 3:-71941808 MsG0380015567.01.T01:CDS
CAACCTCAAATCCTATGCAG+TGG 0.609670 3:-71942139 MsG0380015567.01.T01:CDS
TTCAAGGTATTCCCATCTAG+TGG 0.612621 3:-71942011 MsG0380015567.01.T01:CDS
TCTCAGAAATGGCAATGTTG+AGG 0.613036 3:+71942726 None:intergenic
TTCAAGTAAAACACACTGGT+AGG 0.614437 3:+71941891 None:intergenic
CTTTGCCTGGAATGTTCGAG+CGG 0.615058 3:-71942283 MsG0380015567.01.T01:CDS
CAAAGGAGTGATATTGTCAG+TGG 0.615527 3:+71943894 None:intergenic
ACTCCCCATGTTAAGTGTGG+AGG 0.616008 3:+71942191 None:intergenic
CAATGAATAATAGTTTGAAG+GGG 0.616083 3:-71941575 MsG0380015567.01.T01:three_prime_UTR
ATTGATAAATCCCGGTGATG+AGG 0.617618 3:-71942609 MsG0380015567.01.T01:CDS
GAATATCTAGTTAAGGAGGT+GGG 0.622860 3:-71941927 MsG0380015567.01.T01:CDS
CCATCATAACTGAGATTCAG+GGG 0.631846 3:+71941610 None:intergenic
AATGCTTCGCGAAGGTCACA+CGG 0.631960 3:+71944120 None:intergenic
AGTGGAAACAGCAGTGGACA+TGG 0.636832 3:+71943912 None:intergenic
AACACAATAACCTCATCACC+GGG 0.638783 3:+71942599 None:intergenic
ATTGTCAGTGGAAACAGCAG+TGG 0.639763 3:+71943906 None:intergenic
ATGGGTAGAGCAAAATCTGG+AGG 0.644262 3:+71942503 None:intergenic
TTTCTGGCAGGAAGGACCGA+CGG 0.644994 3:+71944148 None:intergenic
GGGAATAATCAGTATGCTAG+GGG 0.645649 3:-71942764 MsG0380015567.01.T01:CDS
TCAACATTGCCATTTCTGAG+AGG 0.658762 3:-71942724 MsG0380015567.01.T01:CDS
GGTCCTTCCTGCCAGAAACG+GGG 0.661117 3:-71944143 MsG0380015567.01.T01:five_prime_UTR
TGGATTCAAGTAAAACACAC+TGG 0.663871 3:+71941887 None:intergenic
AATGAGAGATGGGAATTTGG+GGG 0.665738 3:+71943945 None:intergenic
TGGGTAGAGCAAAATCTGGA+GGG 0.667591 3:+71942504 None:intergenic
TCTGACTTAATGCTTCGCGA+AGG 0.672744 3:+71944112 None:intergenic
GCACCTCCACACTTAACATG+GGG 0.680545 3:-71942194 MsG0380015567.01.T01:CDS
CTTTCCAGTAGGATTGTGAG+GGG 0.686125 3:+71942427 None:intergenic
GGAAACAGCAGTGGACATGG+TGG 0.727016 3:+71943915 None:intergenic
TTGTTTGTTAGGTTGCAAAG+CGG 0.733177 3:-71942928 MsG0380015567.01.T01:intron
GGGTTTATAGGAGAATGAGG+AGG 0.748780 3:+71943966 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATAAACATAAACACA+TGG + Chr3:71942713-71942732 None:intergenic 15.0%
!! TTATATATCATGAAAATACA+AGG + Chr3:71944161-71944180 None:intergenic 15.0%
!! AAAATACAAAACCCTAATTT+AGG - Chr3:71941992-71942011 MsG0380015567.01.T01:CDS 20.0%
!! AAATACAAAACCCTAATTTA+GGG - Chr3:71941993-71942012 MsG0380015567.01.T01:CDS 20.0%
!! ATTGAAATGAATAGTAGAAA+AGG + Chr3:71941682-71941701 None:intergenic 20.0%
!! CATTGAATAATTGATGTATT+TGG + Chr3:71942444-71942463 None:intergenic 20.0%
!! CTATTAATATAAGCAATTGT+AGG - Chr3:71942192-71942211 MsG0380015567.01.T01:CDS 20.0%
!! TCAATGAATAATAGTTTGAA+GGG - Chr3:71944099-71944118 MsG0380015567.01.T01:five_prime_UTR 20.0%
!! TTCAATGAATAATAGTTTGA+AGG - Chr3:71944098-71944117 MsG0380015567.01.T01:five_prime_UTR 20.0%
!! TTGAAATGAATAGTAGAAAA+GGG + Chr3:71941681-71941700 None:intergenic 20.0%
!! TTGAGAATATTCATATTTAC+TGG - Chr3:71941898-71941917 MsG0380015567.01.T01:CDS 20.0%
!!! ATTTTCCATTAATTCATTTC+TGG - Chr3:71941831-71941850 MsG0380015567.01.T01:CDS 20.0%
!!! ATTTTGTGAATATCTAGTTA+AGG - Chr3:71943741-71943760 MsG0380015567.01.T01:intron 20.0%
!!! TTTGCTTTAATTTGTTTGTT+AGG - Chr3:71942736-71942755 MsG0380015567.01.T01:CDS 20.0%
!!! TTTTCCATTAATTCATTTCT+GGG - Chr3:71941832-71941851 MsG0380015567.01.T01:CDS 20.0%
! AGAGGTTTAAAAAAGATACT+GGG - Chr3:71942969-71942988 MsG0380015567.01.T01:intron 25.0%
! ATATAAACTTAGTCCCTATT+TGG + Chr3:71942529-71942548 None:intergenic 25.0%
! ATGTATCTGGTCTATAATAT+AGG - Chr3:71942418-71942437 MsG0380015567.01.T01:CDS 25.0%
! ATTTAGGCAAAGCTATAATT+TGG - Chr3:71942087-71942106 MsG0380015567.01.T01:CDS 25.0%
! CAATGAATAATAGTTTGAAG+GGG - Chr3:71944100-71944119 MsG0380015567.01.T01:five_prime_UTR 25.0%
! CATTGAATAATTGATGTATC+TGG - Chr3:71942405-71942424 MsG0380015567.01.T01:CDS 25.0%
! GAATATGTGTTTCAGAATTA+TGG + Chr3:71942156-71942175 None:intergenic 25.0%
! GCTTCATAAGAATCATAAAA+AGG + Chr3:71943106-71943125 None:intergenic 25.0%
! TGAAAATACAAGGCTTAAAA+CGG + Chr3:71944151-71944170 None:intergenic 25.0%
! TTAAACAAAATCATTGTCCA+TGG - Chr3:71942113-71942132 MsG0380015567.01.T01:CDS 25.0%
! TTATTACACTGAACTAAAGA+GGG - Chr3:71943591-71943610 MsG0380015567.01.T01:intron 25.0%
! TTCATATTTACTGGTAGAAA+TGG - Chr3:71941907-71941926 MsG0380015567.01.T01:CDS 25.0%
! TTTCCATTAATTCATTTCTG+GGG - Chr3:71941833-71941852 MsG0380015567.01.T01:CDS 25.0%
!! ATATCATTTTCATGTCCAAA+AGG + Chr3:71943718-71943737 None:intergenic 25.0%
!! TATCATTTTCATGTCCAAAA+GGG + Chr3:71943717-71943736 None:intergenic 25.0%
!! TTTTCCAGAAATTGAAATGT+AGG - Chr3:71943957-71943976 MsG0380015567.01.T01:CDS 25.0%
!!! TAAGCAAAAAGTCACTTTTT+AGG + Chr3:71942469-71942488 None:intergenic 25.0%
!!! TTTTTTAAACCTCTCAGAAA+TGG + Chr3:71942963-71942982 None:intergenic 25.0%
AAACATGGAGCTATTAATCT+TGG - Chr3:71942821-71942840 MsG0380015567.01.T01:CDS 30.0%
AAGGAAATGAATGAGAAAAG+GGG - Chr3:71941944-71941963 MsG0380015567.01.T01:CDS 30.0%
AAGGGTAACGATTTATAAGA+AGG + Chr3:71941663-71941682 None:intergenic 30.0%
AAGTCAGAAAGGAATCAAAT+TGG - Chr3:71941578-71941597 MsG0380015567.01.T01:three_prime_UTR 30.0%
AAGTTATCCTATAGAGCTTA+AGG + Chr3:71942281-71942300 None:intergenic 30.0%
AATCTTTACTCCCAAATTCA+AGG - Chr3:71944193-71944212 MsG0380015567.01.T01:five_prime_UTR 30.0%
ACCAAAGATAATATATCGTC+TGG - Chr3:71942598-71942617 MsG0380015567.01.T01:CDS 30.0%
ACCAGACGATATATTATCTT+TGG + Chr3:71942602-71942621 None:intergenic 30.0%
AGTAAGCACTTAACCAAATA+GGG - Chr3:71942513-71942532 MsG0380015567.01.T01:CDS 30.0%
AGTTCAGTGTAATAAGAATC+TGG + Chr3:71943586-71943605 None:intergenic 30.0%
ATTAATAGCTCCATGTTTGA+TGG + Chr3:71942819-71942838 None:intergenic 30.0%
ATTTACTGGTAGAAATGGTT+TGG - Chr3:71941912-71941931 MsG0380015567.01.T01:CDS 30.0%
CATCTTTGCAGAAAGTAAAT+CGG + Chr3:71943834-71943853 None:intergenic 30.0%
CCAACATCAAATATATGTTC+GGG - Chr3:71942024-71942043 MsG0380015567.01.T01:CDS 30.0%
CTTATTACACTGAACTAAAG+AGG - Chr3:71943590-71943609 MsG0380015567.01.T01:intron 30.0%
CTTATTACCTTAAGCTCTAT+AGG - Chr3:71942271-71942290 MsG0380015567.01.T01:CDS 30.0%
GAAGGAAATGAATGAGAAAA+GGG - Chr3:71941943-71941962 MsG0380015567.01.T01:CDS 30.0%
GAGAGGTTTAAAAAAGATAC+TGG - Chr3:71942968-71942987 MsG0380015567.01.T01:intron 30.0%
GATAAATTTGATCGATGAGA+AGG + Chr3:71941862-71941881 None:intergenic 30.0%
GCCAACATCAAATATATGTT+CGG - Chr3:71942023-71942042 MsG0380015567.01.T01:CDS 30.0%
TATAAGAAGGAATGAATCTG+AGG + Chr3:71941650-71941669 None:intergenic 30.0%
TGATGAAGTGTATGATAAGT+TGG - Chr3:71943339-71943358 MsG0380015567.01.T01:intron 30.0%
TTGTGAATATCTAGTTAAGG+AGG - Chr3:71943744-71943763 MsG0380015567.01.T01:intron 30.0%
TTTACTGGTAGAAATGGTTT+GGG - Chr3:71941913-71941932 MsG0380015567.01.T01:CDS 30.0%
TTTACTTTCTGCAAAGATGA+AGG - Chr3:71943835-71943854 MsG0380015567.01.T01:intron 30.0%
! ATCATTTTCATGTCCAAAAG+GGG + Chr3:71943716-71943735 None:intergenic 30.0%
! TAACAGTTATCTCCTTTTCA+GGG + Chr3:71943006-71943025 None:intergenic 30.0%
! TGATAAGTTGGCATTTGATA+TGG - Chr3:71943351-71943370 MsG0380015567.01.T01:intron 30.0%
! TTATGAAGCTACTTTATCCA+TGG - Chr3:71943117-71943136 MsG0380015567.01.T01:intron 30.0%
! TTCCATTAATTCATTTCTGG+GGG - Chr3:71941834-71941853 MsG0380015567.01.T01:CDS 30.0%
! TTTTACTTGAATCCAGAAGA+GGG - Chr3:71943796-71943815 MsG0380015567.01.T01:intron 30.0%
!!! TATTTTGGTTGAAGGATTGA+AGG - Chr3:71943633-71943652 MsG0380015567.01.T01:intron 30.0%
!!! TTTTTTAAGAAGGAAGCAGT+AGG - Chr3:71942644-71942663 MsG0380015567.01.T01:CDS 30.0%
AAACACAATAACCTCATCAC+CGG + Chr3:71943080-71943099 None:intergenic 35.0%
AACCCCCAGAAATGAATTAA+TGG + Chr3:71941839-71941858 None:intergenic 35.0%
AAGTCTGGACCATCAAAATT+TGG + Chr3:71942857-71942876 None:intergenic 35.0%
AGGAAATGAATGAGAAAAGG+GGG - Chr3:71941945-71941964 MsG0380015567.01.T01:CDS 35.0%
ATTTCAATTGCTTCTTTGCC+TGG - Chr3:71943379-71943398 MsG0380015567.01.T01:intron 35.0%
CAAAGATGAAGGAACTCTTA+GGG - Chr3:71943846-71943865 MsG0380015567.01.T01:intron 35.0%
CCAGAAATTGAAATGTAGGT+AGG - Chr3:71943961-71943980 MsG0380015567.01.T01:CDS 35.0%
CCCGAACATATATTTGATGT+TGG + Chr3:71942027-71942046 None:intergenic 35.0%
CCTACCTACATTTCAATTTC+TGG + Chr3:71943964-71943983 None:intergenic 35.0%
CGATGTGTCAGCTTATATTT+AGG - Chr3:71942071-71942090 MsG0380015567.01.T01:CDS 35.0%
GAACTATAATAGTGACCAGA+AGG - Chr3:71942490-71942509 MsG0380015567.01.T01:CDS 35.0%
GAAGCAGTAGGATTTATGAA+AGG - Chr3:71942656-71942675 MsG0380015567.01.T01:CDS 35.0%
GAATATCTAGTTAAGGAGGT+GGG - Chr3:71943748-71943767 MsG0380015567.01.T01:intron 35.0%
GAGTAAGCACTTAACCAAAT+AGG - Chr3:71942512-71942531 MsG0380015567.01.T01:CDS 35.0%
GGAAGGAAATGAATGAGAAA+AGG - Chr3:71941942-71941961 MsG0380015567.01.T01:CDS 35.0%
GTGTTAGGATTGATAAATCC+CGG - Chr3:71943058-71943077 MsG0380015567.01.T01:intron 35.0%
TAAATAGGATGAACCTGCAA+AGG + Chr3:71941801-71941820 None:intergenic 35.0%
TATTATGTTTCACTCTCCGT+CGG - Chr3:71941511-71941530 MsG0380015567.01.T01:three_prime_UTR 35.0%
TGAACTAAAGAGGGACTATA+TGG - Chr3:71943600-71943619 MsG0380015567.01.T01:intron 35.0%
TGAATATCTAGTTAAGGAGG+TGG - Chr3:71943747-71943766 MsG0380015567.01.T01:intron 35.0%
TGAGTTTGATGAAATCACCA+TGG + Chr3:71942133-71942152 None:intergenic 35.0%
TGGATTCAAGTAAAACACAC+TGG + Chr3:71943791-71943810 None:intergenic 35.0%
TTACTGGTAGAAATGGTTTG+GGG - Chr3:71941914-71941933 MsG0380015567.01.T01:CDS 35.0%
TTCAAGTAAAACACACTGGT+AGG + Chr3:71943787-71943806 None:intergenic 35.0%
! CAGGGTTTTCCAAATTTTGA+TGG - Chr3:71942845-71942864 MsG0380015567.01.T01:CDS 35.0%
! GTAACAGTTATCTCCTTTTC+AGG + Chr3:71943007-71943026 None:intergenic 35.0%
! GTTTTACTTGAATCCAGAAG+AGG - Chr3:71943795-71943814 MsG0380015567.01.T01:intron 35.0%
! TAGAAATGGTTTGGGGAAAA+GGG - Chr3:71941921-71941940 MsG0380015567.01.T01:CDS 35.0%
! TATGGCAAAGAGAGCTATTT+TGG - Chr3:71943618-71943637 MsG0380015567.01.T01:intron 35.0%
! TTGTTTGTTAGGTTGCAAAG+CGG - Chr3:71942747-71942766 MsG0380015567.01.T01:CDS 35.0%
!! ATATATGTTCGGGTTGATAG+TGG - Chr3:71942034-71942053 MsG0380015567.01.T01:CDS 35.0%
!! GTGAGGGGTATTTAAAAGAA+TGG + Chr3:71943236-71943255 None:intergenic 35.0%
!! TATATGTTCGGGTTGATAGT+GGG - Chr3:71942035-71942054 MsG0380015567.01.T01:CDS 35.0%
!!! AAGAGAGCTATTTTGGTTGA+AGG - Chr3:71943625-71943644 MsG0380015567.01.T01:intron 35.0%
AACACAATAACCTCATCACC+GGG + Chr3:71943079-71943098 None:intergenic 40.0%
AACCTCAAATCCTATGCAGT+GGG - Chr3:71943537-71943556 MsG0380015567.01.T01:intron 40.0%
AAGCAGCTATTCAAGCAATC+AGG - Chr3:71942885-71942904 MsG0380015567.01.T01:CDS 40.0%
AAGGAGATAACTGTTACGTC+TGG - Chr3:71943010-71943029 MsG0380015567.01.T01:intron 40.0%
AATCAGTATGCTAGGGGTTA+TGG - Chr3:71942917-71942936 MsG0380015567.01.T01:CDS 40.0%
AATGAGAGATGGGAATTTGG+GGG + Chr3:71941733-71941752 None:intergenic 40.0%
ACAAAGTAGGTTCCACTAGA+TGG + Chr3:71943679-71943698 None:intergenic 40.0%
ACGGGAATAATCAGTATGCT+AGG - Chr3:71942909-71942928 MsG0380015567.01.T01:CDS 40.0%
ACGGTGACAATGAACTCTTT+AGG - Chr3:71943415-71943434 MsG0380015567.01.T01:intron 40.0%
ACTAGATTCTTTCCCTCTTC+TGG + Chr3:71943811-71943830 None:intergenic 40.0%
AGAAAAGGGGGTAGATTTCT+AGG - Chr3:71941957-71941976 MsG0380015567.01.T01:CDS 40.0%
AGCAATGAGAGATGGGAATT+TGG + Chr3:71941736-71941755 None:intergenic 40.0%
AGCAGCTATTCAAGCAATCA+GGG - Chr3:71942886-71942905 MsG0380015567.01.T01:CDS 40.0%
AGCCATCATAACTGAGATTC+AGG + Chr3:71944070-71944089 None:intergenic 40.0%
AGGAGATAACTGTTACGTCT+GGG - Chr3:71943011-71943030 MsG0380015567.01.T01:intron 40.0%
AGTATGCTTGCCATCAAACA+TGG - Chr3:71942806-71942825 MsG0380015567.01.T01:CDS 40.0%
ATATATCGTCTGGTAGAAGC+AGG - Chr3:71942608-71942627 MsG0380015567.01.T01:CDS 40.0%
ATCTAGTGGAACCTACTTTG+TGG - Chr3:71943678-71943697 MsG0380015567.01.T01:intron 40.0%
ATCTTTCCAGTAGGATTGTG+AGG + Chr3:71943253-71943272 None:intergenic 40.0%
ATGGCTGGTGCAAAAGTAAA+AGG - Chr3:71943136-71943155 MsG0380015567.01.T01:intron 40.0%
ATTGATAAATCCCGGTGATG+AGG - Chr3:71943066-71943085 MsG0380015567.01.T01:intron 40.0%
CAAAGGAGTGATATTGTCAG+TGG + Chr3:71941784-71941803 None:intergenic 40.0%
CAAAGTAGGTTCCACTAGAT+GGG + Chr3:71943678-71943697 None:intergenic 40.0%
CAATGAGAGATGGGAATTTG+GGG + Chr3:71941734-71941753 None:intergenic 40.0%
CAGGGGAAAAATCACAATCT+AGG + Chr3:71944051-71944070 None:intergenic 40.0%
CCATCATAACTGAGATTCAG+GGG + Chr3:71944068-71944087 None:intergenic 40.0%
CGGGAATAATCAGTATGCTA+GGG - Chr3:71942910-71942929 MsG0380015567.01.T01:CDS 40.0%
CGGTGACAATGAACTCTTTA+GGG - Chr3:71943416-71943435 MsG0380015567.01.T01:intron 40.0%
CTTACTTAGCTCAACAGTCT+CGG - Chr3:71944004-71944023 MsG0380015567.01.T01:CDS 40.0%
GATGGCAAGCATACTCATTT+GGG + Chr3:71942801-71942820 None:intergenic 40.0%
GCAAAGATGAAGGAACTCTT+AGG - Chr3:71943845-71943864 MsG0380015567.01.T01:intron 40.0%
GCAATGAGAGATGGGAATTT+GGG + Chr3:71941735-71941754 None:intergenic 40.0%
GCAGACTTCAACTCTTCAAT+GGG + Chr3:71943193-71943212 None:intergenic 40.0%
GCCATCATAACTGAGATTCA+GGG + Chr3:71944069-71944088 None:intergenic 40.0%
GCTAATTGTAGACCCTGAAA+AGG - Chr3:71942991-71943010 MsG0380015567.01.T01:intron 40.0%
GGAGCTATTAATCTTGGTCA+GGG - Chr3:71942827-71942846 MsG0380015567.01.T01:CDS 40.0%
GGCAGATAGACCCTAAATTA+GGG + Chr3:71942006-71942025 None:intergenic 40.0%
GGGAATAATCAGTATGCTAG+GGG - Chr3:71942911-71942930 MsG0380015567.01.T01:CDS 40.0%
GTAAAACACACTGGTAGGAA+TGG + Chr3:71943782-71943801 None:intergenic 40.0%
GTGATCTACAACCACAAAGT+AGG + Chr3:71943692-71943711 None:intergenic 40.0%
TCAATGGGTAGAGCAAAATC+TGG + Chr3:71943178-71943197 None:intergenic 40.0%
TCCTTGACTGGATGGAAAAT+CGG - Chr3:71943448-71943467 MsG0380015567.01.T01:intron 40.0%
TCTCAGAAATGGCAATGTTG+AGG + Chr3:71942952-71942971 None:intergenic 40.0%
TCTTTCCAGTAGGATTGTGA+GGG + Chr3:71943252-71943271 None:intergenic 40.0%
TGACAATATCACTCCTTTGC+AGG - Chr3:71941785-71941804 MsG0380015567.01.T01:exon 40.0%
TGAGTGAACATCTTTCCAGT+AGG + Chr3:71943262-71943281 None:intergenic 40.0%
TGATGGCAAGCATACTCATT+TGG + Chr3:71942802-71942821 None:intergenic 40.0%
TGATGGTCCAGACTTTGTAA+AGG - Chr3:71942862-71942881 MsG0380015567.01.T01:CDS 40.0%
TGGAAAGATGTTCACTCAAG+AGG - Chr3:71943264-71943283 MsG0380015567.01.T01:intron 40.0%
TGGAGCTATTAATCTTGGTC+AGG - Chr3:71942826-71942845 MsG0380015567.01.T01:CDS 40.0%
TGGCAGATAGACCCTAAATT+AGG + Chr3:71942007-71942026 None:intergenic 40.0%
TTGCATTGAGAACGATGTTC+TGG - Chr3:71943309-71943328 MsG0380015567.01.T01:intron 40.0%
TTTGGTCCTTACACCAATCA+GGG + Chr3:71942584-71942603 None:intergenic 40.0%
! GATTTGAGGTTGCGAAAGTA+AGG + Chr3:71943528-71943547 None:intergenic 40.0%
! GTAGAAATGGTTTGGGGAAA+AGG - Chr3:71941920-71941939 MsG0380015567.01.T01:CDS 40.0%
! TCAACATTGCCATTTCTGAG+AGG - Chr3:71942951-71942970 MsG0380015567.01.T01:intron 40.0%
! TTCAAGGTATTCCCATCTAG+TGG - Chr3:71943664-71943683 MsG0380015567.01.T01:intron 40.0%
!! TTTTACTTTTGCACCAGCCA+TGG + Chr3:71943137-71943156 None:intergenic 40.0%
AATACCCCTCACAATCCTAC+TGG - Chr3:71943244-71943263 MsG0380015567.01.T01:intron 45.0%
AGACATTCTCCTTGACTGGA+TGG - Chr3:71943440-71943459 MsG0380015567.01.T01:intron 45.0%
AGCACCTCCACACTTAACAT+GGG - Chr3:71943480-71943499 MsG0380015567.01.T01:intron 45.0%
ATGAGAGATGGGAATTTGGG+GGG + Chr3:71941732-71941751 None:intergenic 45.0%
ATGGGTAGAGCAAAATCTGG+AGG + Chr3:71943175-71943194 None:intergenic 45.0%
ATTGTCAGTGGAAACAGCAG+TGG + Chr3:71941772-71941791 None:intergenic 45.0%
CAACCTCAAATCCTATGCAG+TGG - Chr3:71943536-71943555 MsG0380015567.01.T01:intron 45.0%
CCCCTGAATCTCAGTTATGA+TGG - Chr3:71944065-71944084 MsG0380015567.01.T01:exon 45.0%
CGCAGACTTCAACTCTTCAA+TGG + Chr3:71943194-71943213 None:intergenic 45.0%
CTATTCAAGCAATCAGGGAC+GGG - Chr3:71942891-71942910 MsG0380015567.01.T01:CDS 45.0%
CTCAATGCAAAGAGAAGCGA+TGG + Chr3:71943299-71943318 None:intergenic 45.0%
CTTTCCAGTAGGATTGTGAG+GGG + Chr3:71943251-71943270 None:intergenic 45.0%
CTTTGGTCCTTACACCAATC+AGG + Chr3:71942585-71942604 None:intergenic 45.0%
GAAATGGCAATGTTGAGGTC+TGG + Chr3:71942947-71942966 None:intergenic 45.0%
GCAATTGCTGCAACTGTGTT+AGG - Chr3:71943043-71943062 MsG0380015567.01.T01:intron 45.0%
GCTATTCAAGCAATCAGGGA+CGG - Chr3:71942890-71942909 MsG0380015567.01.T01:CDS 45.0%
GCTGCTTCCTTTACAAAGTC+TGG + Chr3:71942872-71942891 None:intergenic 45.0%
GGGTTTATAGGAGAATGAGG+AGG + Chr3:71941712-71941731 None:intergenic 45.0%
GGTTAAGTGCTTACTCCTTC+TGG + Chr3:71942508-71942527 None:intergenic 45.0%
GTTGAAGGATTGAAGGCTGT+TGG - Chr3:71943640-71943659 MsG0380015567.01.T01:intron 45.0%
TAGCACCTCCACACTTAACA+TGG - Chr3:71943479-71943498 MsG0380015567.01.T01:intron 45.0%
TCTGACTTAATGCTTCGCGA+AGG + Chr3:71941566-71941585 None:intergenic 45.0%
TGGGAATTTGGGGGGTTTAT+AGG + Chr3:71941724-71941743 None:intergenic 45.0%
TGGGTAGAGCAAAATCTGGA+GGG + Chr3:71943174-71943193 None:intergenic 45.0%
! AATGGTTTGGGGAAAAGGGA+AGG - Chr3:71941925-71941944 MsG0380015567.01.T01:CDS 45.0%
! CGCGAAGCATTAAGTCAGAA+AGG - Chr3:71941567-71941586 MsG0380015567.01.T01:three_prime_UTR 45.0%
! GAAGCTACTTTATCCATGGC+TGG - Chr3:71943121-71943140 MsG0380015567.01.T01:intron 45.0%
! GTTGTAGATCACACCCCTTT+TGG - Chr3:71943700-71943719 MsG0380015567.01.T01:intron 45.0%
!! ATTGAAGGCTGTTGGCTTCA+AGG - Chr3:71943648-71943667 MsG0380015567.01.T01:intron 45.0%
!! TGTTAAGTGTGGAGGTGCTA+TGG + Chr3:71943479-71943498 None:intergenic 45.0%
!! AAAATAAACAATTAATAAAT+AGG + Chr3:71941816-71941835 None:intergenic 5.0%
!!! ATTATTTTTTTTTTTTAAGA+AGG - Chr3:71942634-71942653 MsG0380015567.01.T01:CDS 5.0%
AAACCGCCCTGATTGGTGTA+AGG - Chr3:71942575-71942594 MsG0380015567.01.T01:CDS 50.0%
AACTGTTACGTCTGGGTGCA+CGG - Chr3:71943018-71943037 MsG0380015567.01.T01:intron 50.0%
AATGCTTCGCGAAGGTCACA+CGG + Chr3:71941558-71941577 None:intergenic 50.0%
ACTCCCCATGTTAAGTGTGG+AGG + Chr3:71943487-71943506 None:intergenic 50.0%
AGCCCACTGCATAGGATTTG+AGG + Chr3:71943542-71943561 None:intergenic 50.0%
AGGAGAGAATGTGTGCAGCA+GGG + Chr3:71941630-71941649 None:intergenic 50.0%
AGTGGAAACAGCAGTGGACA+TGG + Chr3:71941766-71941785 None:intergenic 50.0%
CCTTTCAAAACCGCCCTGAT+TGG - Chr3:71942568-71942587 MsG0380015567.01.T01:CDS 50.0%
CTTTGCCTGGAATGTTCGAG+CGG - Chr3:71943392-71943411 MsG0380015567.01.T01:intron 50.0%
GACTGGATGGAAAATCGGCT+GGG - Chr3:71943453-71943472 MsG0380015567.01.T01:intron 50.0%
GCACCTCCACACTTAACATG+GGG - Chr3:71943481-71943500 MsG0380015567.01.T01:intron 50.0%
GGCTGCTGTTGAGAGAATGA+AGG - Chr3:71943867-71943886 MsG0380015567.01.T01:intron 50.0%
GGGAAGACATTCTCCTTGAC+TGG - Chr3:71943436-71943455 MsG0380015567.01.T01:intron 50.0%
GGGGGGTTTATAGGAGAATG+AGG + Chr3:71941715-71941734 None:intergenic 50.0%
TATCGTCTGGTAGAAGCAGG+AGG - Chr3:71942611-71942630 MsG0380015567.01.T01:CDS 50.0%
TCTAGTTAAGGAGGTGGGAG+TGG - Chr3:71943753-71943772 MsG0380015567.01.T01:intron 50.0%
TGACTGGATGGAAAATCGGC+TGG - Chr3:71943452-71943471 MsG0380015567.01.T01:intron 50.0%
!! GCCGATTTTCCATCCAGTCA+AGG + Chr3:71943452-71943471 None:intergenic 50.0%
!!! CCAATCAGGGCGGTTTTGAA+AGG + Chr3:71942571-71942590 None:intergenic 50.0%
AACAGCAGTGGACATGGTGG+CGG + Chr3:71941760-71941779 None:intergenic 55.0%
AGTTAAGGAGGTGGGAGTGG+TGG - Chr3:71943756-71943775 MsG0380015567.01.T01:intron 55.0%
CGCACTCCCCATGTTAAGTG+TGG + Chr3:71943490-71943509 None:intergenic 55.0%
GAGGAGAGAATGTGTGCAGC+AGG + Chr3:71941631-71941650 None:intergenic 55.0%
GGAAACAGCAGTGGACATGG+TGG + Chr3:71941763-71941782 None:intergenic 55.0%
GGAGAGAATGTGTGCAGCAG+GGG + Chr3:71941629-71941648 None:intergenic 55.0%
GGTCCTTACACCAATCAGGG+CGG + Chr3:71942581-71942600 None:intergenic 55.0%
TCGGTCCTTCCTGCCAGAAA+CGG - Chr3:71941530-71941549 MsG0380015567.01.T01:three_prime_UTR 55.0%
TGGCGGCAGCAATGAGAGAT+GGG + Chr3:71941743-71941762 None:intergenic 55.0%
! CTTAACATGGGGAGTGCGAC+AGG - Chr3:71943492-71943511 MsG0380015567.01.T01:intron 55.0%
! TTTCTGGCAGGAAGGACCGA+CGG + Chr3:71941530-71941549 None:intergenic 55.0%
ACCGTCCGCTCGAACATTCC+AGG + Chr3:71943400-71943419 None:intergenic 60.0%
ACTGCAGCAGCCCACTGCAT+AGG + Chr3:71943550-71943569 None:intergenic 60.0%
CGGTCCTTCCTGCCAGAAAC+GGG - Chr3:71941531-71941550 MsG0380015567.01.T01:three_prime_UTR 60.0%
GCCTGGAATGTTCGAGCGGA+CGG - Chr3:71943396-71943415 MsG0380015567.01.T01:intron 60.0%
GGTCCTTCCTGCCAGAAACG+GGG - Chr3:71941532-71941551 MsG0380015567.01.T01:three_prime_UTR 60.0%
GTGGCGGCAGCAATGAGAGA+TGG + Chr3:71941744-71941763 None:intergenic 60.0%
AGGTCACACGGCCCCGTTTC+TGG + Chr3:71941546-71941565 None:intergenic 65.0%
!! CACACGGCCCCGTTTCTGGC+AGG + Chr3:71941542-71941561 None:intergenic 70.0%
!! CGGCCCCGTTTCTGGCAGGA+AGG + Chr3:71941538-71941557 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 71941485 71944212 71941485 ID=MsG0380015567.01;Name=MsG0380015567.01
Chr3 mRNA 71941485 71944212 71941485 ID=MsG0380015567.01.T01;Parent=MsG0380015567.01;Name=MsG0380015567.01.T01;_AED=0.40;_eAED=0.40;_QI=133|1|1|1|1|1|2|306|445
Chr3 exon 71941485 71942939 71941485 ID=MsG0380015567.01.T01:exon:23930;Parent=MsG0380015567.01.T01
Chr3 exon 71943891 71944212 71943891 ID=MsG0380015567.01.T01:exon:23929;Parent=MsG0380015567.01.T01
Chr3 five_prime_UTR 71944080 71944212 71944080 ID=MsG0380015567.01.T01:five_prime_utr;Parent=MsG0380015567.01.T01
Chr3 CDS 71943891 71944079 71943891 ID=MsG0380015567.01.T01:cds;Parent=MsG0380015567.01.T01
Chr3 CDS 71941791 71942939 71941791 ID=MsG0380015567.01.T01:cds;Parent=MsG0380015567.01.T01
Chr3 three_prime_UTR 71941485 71941790 71941485 ID=MsG0380015567.01.T01:three_prime_utr;Parent=MsG0380015567.01.T01
Gene Sequence

>MsG0380015567.01.T01

ATGCAGCTCCCCTGCTGCACACATTCTCTCCTCAGATTCATTCCTTCTTATAAATCGTTACCCTTTTCTACTATTCATTTCAATTTCAACACCTCCTCATTCTCCTATAAACCCCCCAAATTCCCATCTCTCATTGCTGCCGCCACCATGTCCACTGCTGTTTCCACTGACAATATCACTCCTTTGCAGGTTGCAAAGCGGTTAGAGAAGTTCAAAACAACAATTTTCACCCAAATGAGTATGCTTGCCATCAAACATGGAGCTATTAATCTTGGTCAGGGTTTTCCAAATTTTGATGGTCCAGACTTTGTAAAGGAAGCAGCTATTCAAGCAATCAGGGACGGGAATAATCAGTATGCTAGGGGTTATGGAGTTCCAGACCTCAACATTGCCATTTCTGAGAGGTTTAAAAAAGATACTGGGCTAATTGTAGACCCTGAAAAGGAGATAACTGTTACGTCTGGGTGCACGGAAGCAATTGCTGCAACTGTGTTAGGATTGATAAATCCCGGTGATGAGGTTATTGTGTTTGCTCCTTTTTATGATTCTTATGAAGCTACTTTATCCATGGCTGGTGCAAAAGTAAAAGGCATCACTCTGCGCCCTCCAGATTTTGCTCTACCCATTGAAGAGTTGAAGTCTGCGATCTCAAAGAATACTCGTGCCATTCTTTTAAATACCCCTCACAATCCTACTGGAAAGATGTTCACTCAAGAGGAGCTTAATACCATCGCTTCTCTTTGCATTGAGAACGATGTTCTGGTTTTCTCTGATGAAGTGTATGATAAGTTGGCATTTGATATGGAACACATTTCAATTGCTTCTTTGCCTGGAATGTTCGAGCGGACGGTGACAATGAACTCTTTAGGGAAGACATTCTCCTTGACTGGATGGAAAATCGGCTGGGCCATAGCACCTCCACACTTAACATGGGGAGTGCGACAGGCACATGCTTTCCTTACTTTCGCAACCTCAAATCCTATGCAGTGGGCTGCTGCAGTAGCTCTAAGAGCACCAGATTCTTATTACACTGAACTAAAGAGGGACTATATGGCAAAGAGAGCTATTTTGGTTGAAGGATTGAAGGCTGTTGGCTTCAAGGTATTCCCATCTAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACATGAAAATGATATTGCATTTTGTGAATATCTAGTTAAGGAGGTGGGAGTGGTGGCCATTCCTACCAGTGTGTTTTACTTGAATCCAGAAGAGGGAAAGAATCTAGTCCGATTTACTTTCTGCAAAGATGAAGGAACTCTTAGGGCTGCTGTTGAGAGAATGAAGGAGAAGCTTAGAAAATGA
Protein sequence

>MsG0380015567.01.T01

MQLPCCTHSLLRFIPSYKSLPFSTIHFNFNTSSFSYKPPKFPSLIAAATMSTAVSTDNITPLQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGNNQYARGYGVPDLNIAISERFKKDTGLIVDPEKEITVTSGCTEAIAATVLGLINPGDEVIVFAPFYDSYEATLSMAGAKVKGITLRPPDFALPIEELKSAISKNTRAILLNTPHNPTGKMFTQEELNTIASLCIENDVLVFSDEVYDKLAFDMEHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFLTFATSNPMQWAAAVALRAPDSYYTELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGHENDIAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEGTLRAAVERMKEKLRK*