AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029371.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029371.01.T01 MTR_5g084930 99.083 327 3 0 33 359 1 327 0.0 671
MsG0580029371.01.T01 MTR_2g021750 84.962 133 20 0 33 165 1 133 6.31e-74 233
MsG0580029371.01.T01 MTR_2g021750 44.037 109 60 1 188 296 26 133 6.47e-24 101
MsG0580029371.01.T01 MTR_7g112040 33.824 272 154 8 33 299 3 253 4.81e-41 148
MsG0580029371.01.T01 MTR_7g112040 42.308 130 67 4 189 312 23 150 6.67e-22 95.9
MsG0580029371.01.T01 MTR_1g087520 35.000 240 136 5 65 299 34 258 1.48e-40 147
MsG0580029371.01.T01 MTR_1g087520 40.541 148 70 4 60 204 147 279 4.30e-25 105
MsG0580029371.01.T01 MTR_1g087520 40.625 128 68 4 195 316 34 159 1.04e-19 89.7
MsG0580029371.01.T01 MTR_3g088220 41.284 109 57 4 62 164 35 142 7.24e-17 82.4
MsG0580029371.01.T01 MTR_3g088220 35.260 173 93 7 195 362 38 196 9.97e-17 82.0
MsG0580029371.01.T01 MTR_3g088220 33.333 105 68 1 58 160 375 479 5.53e-12 67.4
MsG0580029371.01.T01 MTR_1g096790 40.351 114 59 4 62 168 28 139 1.01e-16 81.6
MsG0580029371.01.T01 MTR_1g096790 40.206 97 52 3 195 288 31 124 7.17e-14 72.8
MsG0580029371.01.T01 MTR_8g059015 41.463 82 48 0 62 143 73 154 8.61e-15 72.4
MsG0580029371.01.T01 MTR_8g059015 26.178 191 121 6 104 291 2 175 9.98e-13 66.2
MsG0580029371.01.T01 MTR_2g094180 41.600 125 65 4 167 288 55 174 1.36e-14 75.5
MsG0580029371.01.T01 MTR_2g094180 51.220 82 38 2 62 142 80 160 2.33e-13 71.6
MsG0580029371.01.T01 MTR_2g094180 27.184 206 132 6 96 291 322 519 5.46e-12 67.4
MsG0580029371.01.T01 MTR_2g094180 32.609 138 87 3 68 201 424 559 2.76e-11 65.5
MsG0580029371.01.T01 MTR_2g079420 31.373 153 93 3 1 143 1 151 3.76e-14 70.5
MsG0580029371.01.T01 MTR_2g079420 27.586 145 95 3 143 277 13 157 7.02e-14 69.7
MsG0580029371.01.T01 MTR_1g114290 35.455 110 67 2 62 170 70 176 4.01e-14 70.5
MsG0580029371.01.T01 MTR_1g114290 30.631 111 73 1 185 295 63 169 2.77e-13 68.2
MsG0580029371.01.T01 MTR_2g093680 27.500 120 84 2 49 166 29 147 6.90e-14 69.3
MsG0580029371.01.T01 MTR_2g093680 28.333 120 83 2 188 305 37 155 2.72e-12 64.7
MsG0580029371.01.T01 MTR_2g079340 41.975 81 47 0 63 143 37 117 4.24e-13 67.0
MsG0580029371.01.T01 MTR_2g079340 34.667 75 49 0 195 269 39 113 2.20e-11 62.0
MsG0580029371.01.T01 MTR_1g098660 32.143 84 57 0 68 151 68 151 4.28e-13 67.4
MsG0580029371.01.T01 MTR_1g098660 29.808 104 66 3 198 300 68 165 1.24e-11 63.2
MsG0580029371.01.T01 MTR_4g059450 48.421 95 40 5 62 152 102 191 1.15e-12 69.7
MsG0580029371.01.T01 MTR_4g059450 26.601 203 131 6 99 291 347 541 5.71e-11 64.3
MsG0580029371.01.T01 MTR_2g079400 37.234 94 59 0 50 143 22 115 2.08e-12 64.3
MsG0580029371.01.T01 MTR_3g089065 35.632 87 56 0 65 151 73 159 2.95e-12 65.1
MsG0580029371.01.T01 MTR_4g080800 32.967 91 52 2 192 274 143 232 1.80e-11 65.9
MsG0580029371.01.T01 MTR_4g085880 36.905 84 50 1 63 143 63 146 2.50e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029371.01.T01 AT1G04980 74.096 332 81 1 33 359 5 336 0.0 534
MsG0580029371.01.T01 AT2G32920 75.000 316 77 1 46 359 16 331 2.16e-180 508
MsG0580029371.01.T01 AT2G47470 36.250 240 133 5 65 299 28 252 5.29e-45 156
MsG0580029371.01.T01 AT2G47470 54.369 103 42 3 62 160 143 244 4.07e-28 111
MsG0580029371.01.T01 AT2G47470 39.370 127 71 3 195 316 28 153 2.63e-20 89.7
MsG0580029371.01.T01 AT2G47470 36.250 240 133 5 65 299 28 252 9.14e-45 157
MsG0580029371.01.T01 AT2G47470 54.369 103 42 3 62 160 143 244 4.07e-28 112
MsG0580029371.01.T01 AT2G47470 39.370 127 71 3 195 316 28 153 5.78e-20 90.1
MsG0580029371.01.T01 AT2G47470 36.250 240 133 5 65 299 28 252 1.30e-44 157
MsG0580029371.01.T01 AT2G47470 54.369 103 42 3 62 160 143 244 4.77e-28 112
MsG0580029371.01.T01 AT2G47470 39.370 127 71 3 195 316 28 153 5.80e-20 90.1
MsG0580029371.01.T01 AT2G47470 36.250 240 133 5 65 299 28 252 1.53e-44 157
MsG0580029371.01.T01 AT2G47470 54.369 103 42 3 62 160 143 244 4.54e-28 113
MsG0580029371.01.T01 AT2G47470 39.370 127 71 3 195 316 28 153 6.48e-20 90.5
MsG0580029371.01.T01 AT3G54960 46.154 91 48 1 62 152 101 190 3.85e-19 89.4
MsG0580029371.01.T01 AT3G54960 39.362 94 55 2 195 288 104 195 1.61e-15 78.2
MsG0580029371.01.T01 AT3G54960 46.154 91 48 1 62 152 101 190 5.80e-19 89.0
MsG0580029371.01.T01 AT3G54960 39.362 94 55 2 195 288 104 195 1.76e-15 78.2
MsG0580029371.01.T01 AT3G54960 37.363 91 49 2 68 158 445 527 1.74e-11 65.9
MsG0580029371.01.T01 AT5G60640 36.493 211 111 10 62 258 105 306 2.08e-17 84.3
MsG0580029371.01.T01 AT5G60640 40.566 106 55 4 186 288 99 199 3.06e-15 77.4
MsG0580029371.01.T01 AT5G60640 26.733 202 130 5 100 291 351 544 3.17e-12 68.2
MsG0580029371.01.T01 AT5G60640 36.493 211 111 10 62 258 105 306 2.11e-17 84.0
MsG0580029371.01.T01 AT5G60640 42.424 99 49 4 193 288 106 199 2.21e-15 77.8
MsG0580029371.01.T01 AT5G60640 34.375 96 61 1 198 291 385 480 4.36e-11 64.7
MsG0580029371.01.T01 AT1G21750 40.367 109 58 4 62 164 32 139 2.90e-17 83.6
MsG0580029371.01.T01 AT1G21750 29.518 166 99 5 195 355 35 187 4.89e-15 76.6
MsG0580029371.01.T01 AT1G21750 37.113 97 59 1 58 152 372 468 5.06e-13 70.5
MsG0580029371.01.T01 AT5G60640 36.493 211 111 10 62 258 105 306 2.93e-17 83.6
MsG0580029371.01.T01 AT5G60640 40.566 106 55 4 186 288 99 199 3.41e-15 77.4
MsG0580029371.01.T01 AT5G60640 26.633 199 129 5 94 284 346 535 1.55e-11 66.2
MsG0580029371.01.T01 AT1G21750 40.367 109 58 4 62 164 32 139 3.45e-17 83.2
MsG0580029371.01.T01 AT1G21750 29.518 166 99 5 195 355 35 187 6.92e-15 76.3
MsG0580029371.01.T01 AT1G21750 37.113 97 59 1 58 152 372 468 5.83e-13 70.5
MsG0580029371.01.T01 AT1G21750 35.577 104 64 2 197 298 381 483 1.68e-11 65.9
MsG0580029371.01.T01 AT1G77510 31.169 154 95 4 184 332 23 170 1.25e-16 81.6
MsG0580029371.01.T01 AT1G77510 39.450 109 59 4 62 164 31 138 2.35e-16 80.9
MsG0580029371.01.T01 AT1G77510 36.667 90 54 2 197 284 379 467 4.06e-11 64.7
MsG0580029371.01.T01 AT1G07960 30.000 120 81 2 60 176 25 144 1.20e-14 71.2
MsG0580029371.01.T01 AT1G07960 25.439 114 82 2 186 297 21 133 7.67e-14 68.9
MsG0580029371.01.T01 AT1G07960 30.000 120 81 2 60 176 25 144 1.20e-14 71.2
MsG0580029371.01.T01 AT1G07960 25.439 114 82 2 186 297 21 133 7.67e-14 68.9
MsG0580029371.01.T01 AT1G07960 30.000 120 81 2 60 176 25 144 1.20e-14 71.2
MsG0580029371.01.T01 AT1G07960 25.439 114 82 2 186 297 21 133 7.67e-14 68.9
MsG0580029371.01.T01 AT1G07960 30.000 120 81 2 60 176 25 144 1.20e-14 71.2
MsG0580029371.01.T01 AT1G07960 25.439 114 82 2 186 297 21 133 7.67e-14 68.9
MsG0580029371.01.T01 AT1G35620 40.426 94 51 3 62 152 34 125 1.75e-14 74.7
MsG0580029371.01.T01 AT1G35620 30.822 146 90 5 187 329 29 166 1.86e-12 68.6
MsG0580029371.01.T01 AT1G43560 36.905 84 53 0 68 151 66 149 4.65e-14 70.1
MsG0580029371.01.T01 AT1G76760 31.068 103 67 1 68 170 71 169 6.86e-14 69.7
MsG0580029371.01.T01 AT4G03520 36.082 97 59 2 183 277 74 169 8.92e-13 66.6
MsG0580029371.01.T01 AT4G03520 35.526 76 49 0 68 143 88 163 6.97e-11 61.2
MsG0580029371.01.T01 AT3G15360 36.667 90 57 0 62 151 88 177 1.79e-12 66.2
MsG0580029371.01.T01 AT1G50320 30.201 149 88 4 154 295 31 170 2.61e-12 65.5
MsG0580029371.01.T01 AT4G27080 32.000 125 67 4 158 274 118 232 8.51e-12 66.6
MsG0580029371.01.T01 AT4G27080 32.000 125 67 4 158 274 170 284 9.49e-12 66.6
MsG0580029371.01.T01 AT1G03680 27.097 155 93 4 143 277 9 163 1.61e-11 63.2
MsG0580029371.01.T01 AT3G20560 34.000 100 57 2 183 274 134 232 4.08e-11 64.7

Find 81 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTTCCCTTTCAAATTAT+TGG 0.104762 5:+96049728 None:intergenic
TTCCCAACAATCTTGGTATT+TGG 0.173156 5:-96049311 MsG0580029371.01.T01:CDS
CTTAATTCCTTTCAGGAATA+TGG 0.176621 5:-96050514 MsG0580029371.01.T01:intron
TTCCTTCCTTCCCGACATTT+TGG 0.184244 5:-96049031 MsG0580029371.01.T01:CDS
CTCTAGTAACTTCGATGAAT+TGG 0.285509 5:-96049955 MsG0580029371.01.T01:CDS
GAAGGCAGCCACTGTGTTAA+AGG 0.292239 5:-96051490 MsG0580029371.01.T01:CDS
CTATATAGCTCTGTCACTTC+TGG 0.297987 5:+96049191 None:intergenic
TTTCAGGAATATGGTATTAG+AGG 0.309619 5:-96050505 MsG0580029371.01.T01:intron
TTTGAAAGGGAAGGTTAAAC+TGG 0.309941 5:-96049721 MsG0580029371.01.T01:CDS
GTAAGGCTCTGACTCCTATA+TGG 0.316417 5:-96051515 MsG0580029371.01.T01:CDS
TGCCGAATTCGCACTTCAAC+AGG 0.358905 5:-96050407 MsG0580029371.01.T01:intron
AACCTGTTGAAGTGCGAATT+CGG 0.359545 5:+96050405 None:intergenic
GGCAATTGGTTTAACATCTC+TGG 0.362839 5:+96050426 None:intergenic
TAGAGGATTTCCAACTATAA+AGG 0.370686 5:-96050488 MsG0580029371.01.T01:CDS
CTAGCACCCTCGTAAGGAAT+TGG 0.409040 5:+96049272 None:intergenic
TCAAGGATTCCCAACAATCT+TGG 0.416145 5:-96049318 MsG0580029371.01.T01:CDS
TCCATGGTGCGGGCACTGTA+AGG 0.416505 5:-96051532 MsG0580029371.01.T01:CDS
ACCTTGGACTTGAAGTTGTT+AGG 0.419712 5:+96052985 None:intergenic
TTGTTGAATTCTTTGCTCCA+TGG 0.424265 5:-96051548 MsG0580029371.01.T01:CDS
TGCTGATGCTCACCAATCTC+TGG 0.427343 5:-96051442 MsG0580029371.01.T01:CDS
AGTTCAAAAGGAGTCCTTAC+AGG 0.430959 5:-96048951 MsG0580029371.01.T01:CDS
CTGGCTCCTTGGTAATCAAC+TGG 0.433932 5:+96050445 None:intergenic
AGGAATTGGAGTATCTTTAT+CGG 0.435399 5:+96049286 None:intergenic
AGAAACCACCGCTTCTTCTT+CGG 0.438238 5:-96049988 MsG0580029371.01.T01:CDS
TCTGTTTCTCCCCTCCGCCT+TGG 0.439079 5:+96049005 None:intergenic
GTGTTGTCTATAGGATGTTT+TGG 0.440808 5:-96049088 MsG0580029371.01.T01:intron
TGAAGTGCGAATTCGGCAAT+TGG 0.441042 5:+96050412 None:intergenic
TTATCAAAAGCAAAGAACTT+TGG 0.443575 5:-96049932 MsG0580029371.01.T01:CDS
TTTGTCAGTCTCTAATGAGC+AGG 0.447245 5:-96049349 MsG0580029371.01.T01:intron
GGTGCAAACACCTTTATAGT+TGG 0.448420 5:+96050478 None:intergenic
AACCGTAGAGAGCGTGAGAA+AGG 0.451953 5:+96053034 None:intergenic
TGCTCACCAATCTCTGGCTC+AGG 0.454025 5:-96051436 MsG0580029371.01.T01:intron
GTTTAACATCTCTGGCTCCT+TGG 0.454708 5:+96050434 None:intergenic
ATGAGCAGGTTCAATGTTCA+AGG 0.456443 5:-96049335 MsG0580029371.01.T01:CDS
AATTCTTTGCTCCATGGTGC+GGG 0.458259 5:-96051542 MsG0580029371.01.T01:CDS
GAATCTGCGAGTGATGAAAA+TGG 0.461683 5:+96053134 None:intergenic
ATCATTCGCACTAGAGCAGC+TGG 0.462465 5:-96049231 MsG0580029371.01.T01:CDS
TGACAGGTTCTGAATTCAAA+TGG 0.467668 5:-96051579 MsG0580029371.01.T01:intron
CTCCAAATACCAAGATTGTT+GGG 0.472339 5:+96049309 None:intergenic
GGAAAACCTGAGCCAGAGAT+TGG 0.473756 5:+96051430 None:intergenic
CGGTTAAATGGAAAAGCAAC+AGG 0.474554 5:-96050029 MsG0580029371.01.T01:CDS
GCTCCAAATACCAAGATTGT+TGG 0.479181 5:+96049308 None:intergenic
AGTGAGTTGAAGAACGGGTG+AGG 0.481557 5:+96053008 None:intergenic
ATCCTTTCTCACGCTCTCTA+CGG 0.482498 5:-96053036 MsG0580029371.01.T01:CDS
CAGTTGCAGAGAAGTTCAAA+AGG 0.484219 5:-96048963 MsG0580029371.01.T01:CDS
GTGGCTGCCTTCTCCCATAT+AGG 0.489604 5:+96051501 None:intergenic
ACTATAAAGGTGTTTGCACC+TGG 0.493971 5:-96050475 MsG0580029371.01.T01:CDS
GCCTTGGAATCCAAAATGTC+GGG 0.495320 5:+96049021 None:intergenic
TTAGGAGTGAGTTGAAGAAC+GGG 0.495568 5:+96053003 None:intergenic
AGAGCATCCAATAATTTGAA+AGG 0.498898 5:-96049735 MsG0580029371.01.T01:CDS
GTTAGGAGTGAGTTGAAGAA+CGG 0.501891 5:+96053002 None:intergenic
CGCCTTGGAATCCAAAATGT+CGG 0.513014 5:+96049020 None:intergenic
AAGGCAGCCACTGTGTTAAA+GGG 0.515149 5:-96051489 MsG0580029371.01.T01:CDS
GAGCATCCAATAATTTGAAA+GGG 0.518744 5:-96049734 MsG0580029371.01.T01:CDS
ATCCAATAATTTGAAAGGGA+AGG 0.529134 5:-96049730 MsG0580029371.01.T01:CDS
TAAGGCTCTGACTCCTATAT+GGG 0.533987 5:-96051514 MsG0580029371.01.T01:CDS
GAATTCTTTGCTCCATGGTG+CGG 0.548779 5:-96051543 MsG0580029371.01.T01:CDS
TCCTAACAACTTCAAGTCCA+AGG 0.552476 5:-96052986 MsG0580029371.01.T01:intron
ATCCAAAATGTCGGGAAGGA+AGG 0.552840 5:+96049029 None:intergenic
TCACTACGCTTCTTCAACAA+TGG 0.557550 5:-96053106 MsG0580029371.01.T01:CDS
CTCTAGTGCGAATGATTCGA+TGG 0.558140 5:+96049238 None:intergenic
GCCTTACAGTGCCCGCACCA+TGG 0.567839 5:+96051531 None:intergenic
GTTCTTGTATGAAGAGAAGA+AGG 0.570808 5:+96053158 None:intergenic
CAACTGTTAATAACTGCTGA+AGG 0.571823 5:+96048980 None:intergenic
GCAGTTCTAGCACCCTCGTA+AGG 0.576634 5:+96049266 None:intergenic
GCTCCTTGGTAATCAACTGG+TGG 0.580906 5:+96050448 None:intergenic
GGTTCTGAATTCAAATGGAG+TGG 0.590632 5:-96051574 MsG0580029371.01.T01:CDS
TCTGACTCCTATATGGGAGA+AGG 0.598675 5:-96051508 MsG0580029371.01.T01:CDS
AAAAGGAGTCCTTACAGGCA+AGG 0.604330 5:-96048946 MsG0580029371.01.T01:CDS
TTGTTGAAGAAGCGTAGTGA+TGG 0.604630 5:+96053109 None:intergenic
TAGTTCTACCGAAGAAGAAG+CGG 0.621191 5:+96049980 None:intergenic
TTCTACCGAAGAAGAAGCGG+TGG 0.624355 5:+96049983 None:intergenic
TTGAAAGGGAAGGTTAAACT+GGG 0.631529 5:-96049720 MsG0580029371.01.T01:CDS
TGGAATCCAAAATGTCGGGA+AGG 0.635224 5:+96049025 None:intergenic
GATACTCCAATTCCTTACGA+GGG 0.636183 5:-96049278 MsG0580029371.01.T01:CDS
TGTTGACTGTGATGCTGACA+AGG 0.636371 5:-96049694 MsG0580029371.01.T01:intron
TATAGCTCTGTCACTTCTGG+AGG 0.640322 5:+96049194 None:intergenic
TTAAATGGAAAAGCAACAGG+TGG 0.661631 5:-96050026 MsG0580029371.01.T01:CDS
AGATACTCCAATTCCTTACG+AGG 0.665654 5:-96049279 MsG0580029371.01.T01:CDS
AAACCACCAGTTGATTACCA+AGG 0.716041 5:-96050451 MsG0580029371.01.T01:CDS
AACTACACCCTTTAACACAG+TGG 0.729872 5:+96051482 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTGAAAAAAAAAATTAAT+AGG - Chr5:96049463-96049482 MsG0580029371.01.T01:intron 10.0%
!! GTAATAAATAATTGAAATAT+AGG + Chr5:96052230-96052249 None:intergenic 10.0%
!! TAATATTATTGTATTATGAT+TGG - Chr5:96050377-96050396 MsG0580029371.01.T01:intron 10.0%
!! TATAAATAAATTGAAAAGTA+AGG + Chr5:96052666-96052685 None:intergenic 10.0%
!!! AAAATTATTCATATTTTCTT+TGG + Chr5:96050432-96050451 None:intergenic 10.0%
!!! AAATTATTCATATTTTCTTT+GGG + Chr5:96050431-96050450 None:intergenic 10.0%
!!! GAAAAAATAATTTAGATTTT+TGG - Chr5:96051559-96051578 MsG0580029371.01.T01:CDS 10.0%
!! AAATATTTGATTGAAACTTT+AGG + Chr5:96051762-96051781 None:intergenic 15.0%
!! AATAATATTAAAAGACTGTT+TGG + Chr5:96050367-96050386 None:intergenic 15.0%
!! AATATTTGATTGAAACTTTA+GGG + Chr5:96051761-96051780 None:intergenic 15.0%
!! TGAAAAATTACTACAAATAA+AGG - Chr5:96051867-96051886 MsG0580029371.01.T01:intron 15.0%
!!! AGAACTAAATTTTAAATGTT+TGG + Chr5:96049960-96049979 None:intergenic 15.0%
!! AAAAAACAAGCTAAAAAAGT+GGG + Chr5:96049183-96049202 None:intergenic 20.0%
!! AAATTTAAATACTGAATCTG+AGG + Chr5:96050717-96050736 None:intergenic 20.0%
!! AATTTGATCAATAACTTGAA+AGG - Chr5:96051892-96051911 MsG0580029371.01.T01:intron 20.0%
!! ACACATATTCATATTCATAA+AGG + Chr5:96050798-96050817 None:intergenic 20.0%
!! ATATTTGATTGAAACTTTAG+GGG + Chr5:96051760-96051779 None:intergenic 20.0%
!! ATTGAAAAAAGATTAAACCT+TGG + Chr5:96049137-96049156 None:intergenic 20.0%
!! ATTTGATCAATAACTTGAAA+GGG - Chr5:96051893-96051912 MsG0580029371.01.T01:intron 20.0%
!! CGTTAATGTAATATATTCTA+TGG + Chr5:96051366-96051385 None:intergenic 20.0%
!! TAATTAAGCACTTATCATAT+AGG + Chr5:96051125-96051144 None:intergenic 20.0%
!! TACTAACTAAACTCAAATAA+AGG - Chr5:96050127-96050146 MsG0580029371.01.T01:intron 20.0%
!! TAGCAATAAAATTTAGTTGA+AGG - Chr5:96049785-96049804 MsG0580029371.01.T01:intron 20.0%
!! TCAGAATAATATAAACTCAA+AGG + Chr5:96052722-96052741 None:intergenic 20.0%
!! TTTAACAAACTGTTATTGTT+CGG - Chr5:96052518-96052537 MsG0580029371.01.T01:intron 20.0%
!!! ATATTTAAAATAGTTACAGG+AGG + Chr5:96051176-96051195 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG - Chr5:96051141-96051160 MsG0580029371.01.T01:intron 20.0%
!!! CACATATTTAAAATAGTTAC+AGG + Chr5:96051179-96051198 None:intergenic 20.0%
!!! CTGTAACTATTTTAAATATG+TGG - Chr5:96051177-96051196 MsG0580029371.01.T01:intron 20.0%
!!! TAAAGTTGTTTGATGTTTTA+AGG - Chr5:96051242-96051261 MsG0580029371.01.T01:intron 20.0%
!!! TGTCTTTTTTTATTTCTCAA+AGG - Chr5:96052309-96052328 MsG0580029371.01.T01:intron 20.0%
!!! TTAAGTTGTTTATCCAAATA+GGG - Chr5:96051142-96051161 MsG0580029371.01.T01:intron 20.0%
!!! TTTAGCTTGTTTTTTCAAAT+TGG - Chr5:96049188-96049207 MsG0580029371.01.T01:CDS 20.0%
! AAAACAGCTTATAGCTTATT+TGG - Chr5:96051044-96051063 MsG0580029371.01.T01:intron 25.0%
! AATATCAATGTATTGGGATT+AGG - Chr5:96051968-96051987 MsG0580029371.01.T01:intron 25.0%
! AGGAATGAAGAAATTAACAA+TGG + Chr5:96050697-96050716 None:intergenic 25.0%
! AGTGAGAATATCAATGTATT+GGG - Chr5:96051962-96051981 MsG0580029371.01.T01:intron 25.0%
! ATATCAATGTATTGGGATTA+GGG - Chr5:96051969-96051988 MsG0580029371.01.T01:intron 25.0%
! CAAAAGTTTATGTGTATGTT+TGG + Chr5:96050021-96050040 None:intergenic 25.0%
! GAAAAAACAAGCTAAAAAAG+TGG + Chr5:96049184-96049203 None:intergenic 25.0%
! TATAGTTTATTTGCATGTAC+AGG - Chr5:96052031-96052050 MsG0580029371.01.T01:intron 25.0%
! TATTTGATTGAAACTTTAGG+GGG + Chr5:96051759-96051778 None:intergenic 25.0%
! TCAAGAGCTTATGAAAATTA+GGG + Chr5:96050259-96050278 None:intergenic 25.0%
! TGAGTTTATATTATTCTGAC+AGG - Chr5:96052723-96052742 MsG0580029371.01.T01:intron 25.0%
! TTATAGCTTATTTGGAAAAC+AGG - Chr5:96051052-96051071 MsG0580029371.01.T01:intron 25.0%
! TTATCAAAAGCAAAGAACTT+TGG - Chr5:96052171-96052190 MsG0580029371.01.T01:intron 25.0%
! TTCAAGAGCTTATGAAAATT+AGG + Chr5:96050260-96050279 None:intergenic 25.0%
!! ACATTTTGCTTACATTTCAT+AGG - Chr5:96053186-96053205 MsG0580029371.01.T01:CDS 25.0%
!! CAAACATACACATAAACTTT+TGG - Chr5:96050019-96050038 MsG0580029371.01.T01:CDS 25.0%
!! CATTTTGCTTACATTTCATA+GGG - Chr5:96053187-96053206 MsG0580029371.01.T01:exon 25.0%
!! TAGTGTTACAATTTGGATTT+TGG - Chr5:96051792-96051811 MsG0580029371.01.T01:intron 25.0%
!! TATATAGTTTGTAATGCATC+AGG - Chr5:96050476-96050495 MsG0580029371.01.T01:CDS 25.0%
!! TTATTCATATTTTCTTTGGG+AGG + Chr5:96050428-96050447 None:intergenic 25.0%
!! TTTTTGCTTGAAAACTATCT+GGG - Chr5:96049240-96049259 MsG0580029371.01.T01:CDS 25.0%
!!! ATGGTTGATTTTATGATTCT+GGG - Chr5:96049341-96049360 MsG0580029371.01.T01:CDS 25.0%
!!! ATTTGTTATTGTTTGCATGA+CGG - Chr5:96051436-96051455 MsG0580029371.01.T01:intron 25.0%
!!! TATGGTTGATTTTATGATTC+TGG - Chr5:96049340-96049359 MsG0580029371.01.T01:CDS 25.0%
!!! TATTCATATTTTCTTTGGGA+GGG + Chr5:96050427-96050446 None:intergenic 25.0%
!!! TTTTTTATTTCTCAAAGGTG+TGG - Chr5:96052314-96052333 MsG0580029371.01.T01:intron 25.0%
AACCTTCCCTTTCAAATTAT+TGG + Chr5:96052378-96052397 None:intergenic 30.0%
AACTCAAATAAAGGTCTGTT+TGG - Chr5:96050136-96050155 MsG0580029371.01.T01:intron 30.0%
ACATGTGTAGTGTTACAATT+TGG - Chr5:96051785-96051804 MsG0580029371.01.T01:intron 30.0%
ATCCAATAATTTGAAAGGGA+AGG - Chr5:96052373-96052392 MsG0580029371.01.T01:intron 30.0%
ATGCAGATAGCAAAAAATAG+CGG + Chr5:96052623-96052642 None:intergenic 30.0%
CAAGAGCTTATGAAAATTAG+GGG + Chr5:96050258-96050277 None:intergenic 30.0%
CCTGTTATGATTTACATGTT+CGG - Chr5:96051491-96051510 MsG0580029371.01.T01:CDS 30.0%
CTTAATTCCTTTCAGGAATA+TGG - Chr5:96051589-96051608 MsG0580029371.01.T01:intron 30.0%
GAGCATCCAATAATTTGAAA+GGG - Chr5:96052369-96052388 MsG0580029371.01.T01:intron 30.0%
GAGTGAGAATATCAATGTAT+TGG - Chr5:96051961-96051980 MsG0580029371.01.T01:intron 30.0%
TACAATGAAGTAAAGTTTGC+AGG + Chr5:96052957-96052976 None:intergenic 30.0%
TAGAGGATTTCCAACTATAA+AGG - Chr5:96051615-96051634 MsG0580029371.01.T01:intron 30.0%
TCGAATAAACCAATCTAAAC+AGG + Chr5:96050907-96050926 None:intergenic 30.0%
TCTAATACCATATTCCTGAA+AGG + Chr5:96051599-96051618 None:intergenic 30.0%
TTATTTGCATGTACAGGTAA+AGG - Chr5:96052037-96052056 MsG0580029371.01.T01:intron 30.0%
TTCCATGAAAACAAATGTGT+CGG + Chr5:96049621-96049640 None:intergenic 30.0%
TTTCAGGAATATGGTATTAG+AGG - Chr5:96051598-96051617 MsG0580029371.01.T01:intron 30.0%
! AGAGCATCCAATAATTTGAA+AGG - Chr5:96052368-96052387 MsG0580029371.01.T01:intron 30.0%
! AGATAGATGTCTTCTTTTTG+TGG - Chr5:96051822-96051841 MsG0580029371.01.T01:intron 30.0%
! AGGAATTGGAGTATCTTTAT+CGG + Chr5:96052820-96052839 None:intergenic 30.0%
! ATGGTTGCTTTACATAGAAA+GGG + Chr5:96051347-96051366 None:intergenic 30.0%
! CTTTTTGCTTGAAAACTATC+TGG - Chr5:96049239-96049258 MsG0580029371.01.T01:CDS 30.0%
! GTAATGCATCAGGTTTTTAT+GGG - Chr5:96050486-96050505 MsG0580029371.01.T01:CDS 30.0%
! GTCTTTTCTTAATTCCTTTC+AGG - Chr5:96051582-96051601 MsG0580029371.01.T01:intron 30.0%
! TAAACATGAGTGTTGTCTAT+AGG - Chr5:96053006-96053025 MsG0580029371.01.T01:CDS 30.0%
! TATGGTTGCTTTACATAGAA+AGG + Chr5:96051348-96051367 None:intergenic 30.0%
! TATGTTTGGTTTCACTTTAG+AGG + Chr5:96050007-96050026 None:intergenic 30.0%
! TGTAATGCATCAGGTTTTTA+TGG - Chr5:96050485-96050504 MsG0580029371.01.T01:CDS 30.0%
!! ATTCATATTTTCTTTGGGAG+GGG + Chr5:96050426-96050445 None:intergenic 30.0%
!!! CAGGAGCTAATTTTTTACAA+TGG + Chr5:96052340-96052359 None:intergenic 30.0%
!!! TGTCATGTTTCTGTTTTTGT+TGG - Chr5:96049298-96049317 MsG0580029371.01.T01:CDS 30.0%
AAATAGATTCTACCTGAAGC+TGG + Chr5:96049906-96049925 None:intergenic 35.0%
AAGTACCTGTTAGACAGTTA+GGG - Chr5:96050942-96050961 MsG0580029371.01.T01:intron 35.0%
AAGTTATCCTAGAGAGCTTA+TGG + Chr5:96051021-96051040 None:intergenic 35.0%
AATTAGGGGAAAACAGCTTA+TGG + Chr5:96050244-96050263 None:intergenic 35.0%
ACAAATGTCATGTAAGAGAC+AGG + Chr5:96051422-96051441 None:intergenic 35.0%
CAACTGTTAATAACTGCTGA+AGG + Chr5:96053126-96053145 None:intergenic 35.0%
CATAACAGGAGAAAGTTACA+GGG + Chr5:96051480-96051499 None:intergenic 35.0%
CCGAACATGTAAATCATAAC+AGG + Chr5:96051494-96051513 None:intergenic 35.0%
CTCCAAATACCAAGATTGTT+GGG + Chr5:96052797-96052816 None:intergenic 35.0%
CTCTAGTAACTTCGATGAAT+TGG - Chr5:96052148-96052167 MsG0580029371.01.T01:intron 35.0%
CTTATTTCCATAAGCTCTCT+AGG - Chr5:96051011-96051030 MsG0580029371.01.T01:intron 35.0%
GAATCAGTTTCGTCAAATAG+CGG - Chr5:96052478-96052497 MsG0580029371.01.T01:intron 35.0%
GATATACAATACGTCGAGTA+TGG + Chr5:96051284-96051303 None:intergenic 35.0%
GTAAAAAATTAGCTCCTGAG+TGG - Chr5:96052342-96052361 MsG0580029371.01.T01:intron 35.0%
GTAGAATTACATGTTCAGTC+AGG + Chr5:96052252-96052271 None:intergenic 35.0%
GTTCTTGTATGAAGAGAAGA+AGG + Chr5:96048948-96048967 None:intergenic 35.0%
GTTTATCCAAATAGGGTCAA+GGG - Chr5:96051149-96051168 MsG0580029371.01.T01:intron 35.0%
TAAGTACCTGTTAGACAGTT+AGG - Chr5:96050941-96050960 MsG0580029371.01.T01:intron 35.0%
TACACAACATCTATGAAGCA+TGG + Chr5:96049707-96049726 None:intergenic 35.0%
TACATACCTTTGATGAACCA+TGG - Chr5:96050858-96050877 MsG0580029371.01.T01:intron 35.0%
TCATAACAGGAGAAAGTTAC+AGG + Chr5:96051481-96051500 None:intergenic 35.0%
TGTAGTGTAGTGTGTGAATA+TGG - Chr5:96049322-96049341 MsG0580029371.01.T01:CDS 35.0%
TGTTTATCCAAATAGGGTCA+AGG - Chr5:96051148-96051167 MsG0580029371.01.T01:intron 35.0%
TTAAATGGAAAAGCAACAGG+TGG - Chr5:96052077-96052096 MsG0580029371.01.T01:intron 35.0%
TTACATAGAAAGGGAAGACT+AGG + Chr5:96051338-96051357 None:intergenic 35.0%
TTCCCAACAATCTTGGTATT+TGG - Chr5:96052792-96052811 MsG0580029371.01.T01:intron 35.0%
TTGAAAGGGAAGGTTAAACT+GGG - Chr5:96052383-96052402 MsG0580029371.01.T01:intron 35.0%
TTGTTGAATTCTTTGCTCCA+TGG - Chr5:96050555-96050574 MsG0580029371.01.T01:intron 35.0%
TTTGAAAGGGAAGGTTAAAC+TGG - Chr5:96052382-96052401 MsG0580029371.01.T01:intron 35.0%
! GCTTCAGGTAGAATCTATTT+TGG - Chr5:96049906-96049925 MsG0580029371.01.T01:intron 35.0%
! GGTATTGAACCTGTTTAGAT+TGG - Chr5:96050895-96050914 MsG0580029371.01.T01:intron 35.0%
! GTGTTGTCTATAGGATGTTT+TGG - Chr5:96053015-96053034 MsG0580029371.01.T01:CDS 35.0%
! TTGTAGAATTTTTCGCACCT+TGG - Chr5:96052195-96052214 MsG0580029371.01.T01:intron 35.0%
!! AATATAGGAAGTACTCACCA+AGG + Chr5:96052215-96052234 None:intergenic 35.0%
!! CTTTTGAAGGAACGGTTAAA+TGG - Chr5:96052062-96052081 MsG0580029371.01.T01:intron 35.0%
!! TAAAGGCTCTTTTGAAGGAA+CGG - Chr5:96052054-96052073 MsG0580029371.01.T01:intron 35.0%
!! TCAGGTAGAATCTATTTTGG+AGG - Chr5:96049909-96049928 MsG0580029371.01.T01:CDS 35.0%
!! TGACAGGTTCTGAATTCAAA+TGG - Chr5:96050524-96050543 MsG0580029371.01.T01:intron 35.0%
!!! GATGTTTTGGAAGAGAAATG+TGG - Chr5:96053028-96053047 MsG0580029371.01.T01:CDS 35.0%
!!! GTGCTGTTTTGAATAATGAC+AGG - Chr5:96050508-96050527 MsG0580029371.01.T01:intron 35.0%
!!! TGTTTTTTTCCTTGCCTGTA+AGG + Chr5:96053169-96053188 None:intergenic 35.0%
AAAAAAGTGGGATCACGAAC+TGG + Chr5:96049171-96049190 None:intergenic 40.0%
AAAAAGTGGGATCACGAACT+GGG + Chr5:96049170-96049189 None:intergenic 40.0%
AAACCACCAGTTGATTACCA+AGG - Chr5:96051652-96051671 MsG0580029371.01.T01:intron 40.0%
AACCTGTTGAAGTGCGAATT+CGG + Chr5:96051701-96051720 None:intergenic 40.0%
AACTACACCCTTTAACACAG+TGG + Chr5:96050624-96050643 None:intergenic 40.0%
AAGCTACAATTTCCAGCTTC+AGG - Chr5:96049891-96049910 MsG0580029371.01.T01:intron 40.0%
AAGGGAAGACTAGGAATGTA+AGG + Chr5:96051329-96051348 None:intergenic 40.0%
ACCTTGGACTTGAAGTTGTT+AGG + Chr5:96049121-96049140 None:intergenic 40.0%
ACTCTTCTTGCAACATCACT+TGG - Chr5:96051918-96051937 MsG0580029371.01.T01:intron 40.0%
ACTTTCCCTAACTGTCTAAC+AGG + Chr5:96050950-96050969 None:intergenic 40.0%
AGATACTCCAATTCCTTACG+AGG - Chr5:96052824-96052843 MsG0580029371.01.T01:intron 40.0%
AGTTCAAAAGGAGTCCTTAC+AGG - Chr5:96053152-96053171 MsG0580029371.01.T01:CDS 40.0%
ATGAGCAGGTTCAATGTTCA+AGG - Chr5:96052768-96052787 MsG0580029371.01.T01:intron 40.0%
ATGCTGACAAGGTAAGCTTA+TGG - Chr5:96052420-96052439 MsG0580029371.01.T01:intron 40.0%
CAGTTGCAGAGAAGTTCAAA+AGG - Chr5:96053140-96053159 MsG0580029371.01.T01:CDS 40.0%
CGGTTAAATGGAAAAGCAAC+AGG - Chr5:96052074-96052093 MsG0580029371.01.T01:intron 40.0%
GAAGACTAGGAATGTAAGGA+AGG + Chr5:96051325-96051344 None:intergenic 40.0%
GAATCTGCGAGTGATGAAAA+TGG + Chr5:96048972-96048991 None:intergenic 40.0%
GATACTCCAATTCCTTACGA+GGG - Chr5:96052825-96052844 MsG0580029371.01.T01:intron 40.0%
GCTCCAAATACCAAGATTGT+TGG + Chr5:96052798-96052817 None:intergenic 40.0%
GGCAAAATCAATTCGACTCT+AGG - Chr5:96049930-96049949 MsG0580029371.01.T01:CDS 40.0%
GGTGCAAACACCTTTATAGT+TGG + Chr5:96051628-96051647 None:intergenic 40.0%
TACAATACGTCGAGTATGGT+AGG + Chr5:96051280-96051299 None:intergenic 40.0%
TCAAGGATTCCCAACAATCT+TGG - Chr5:96052785-96052804 MsG0580029371.01.T01:intron 40.0%
TCACTACGCTTCTTCAACAA+TGG - Chr5:96048997-96049016 MsG0580029371.01.T01:CDS 40.0%
TCCTAACAACTTCAAGTCCA+AGG - Chr5:96049117-96049136 MsG0580029371.01.T01:intron 40.0%
TGCTATAGTGCTTCTATAGC+TGG + Chr5:96052579-96052598 None:intergenic 40.0%
TTTGTCAGTCTCTAATGAGC+AGG - Chr5:96052754-96052773 MsG0580029371.01.T01:intron 40.0%
! ACAGGTAAAGGCTCTTTTGA+AGG - Chr5:96052049-96052068 MsG0580029371.01.T01:intron 40.0%
! CTATATAGCTCTGTCACTTC+TGG + Chr5:96052915-96052934 None:intergenic 40.0%
! CTATCTGGGTGTTTTGTGTT+TGG - Chr5:96049254-96049273 MsG0580029371.01.T01:CDS 40.0%
! GGAGCAAAAATTGACTCTAG+AGG + Chr5:96049986-96050005 None:intergenic 40.0%
! GGCAATTGGTTTAACATCTC+TGG + Chr5:96051680-96051699 None:intergenic 40.0%
! GTTAGGAGTGAGTTGAAGAA+CGG + Chr5:96049104-96049123 None:intergenic 40.0%
! TAAGGCTCTGACTCCTATAT+GGG - Chr5:96050589-96050608 MsG0580029371.01.T01:intron 40.0%
! TAATCAACTGGTGGTTTTCC+AGG + Chr5:96051649-96051668 None:intergenic 40.0%
! TAGTTCTACCGAAGAAGAAG+CGG + Chr5:96052126-96052145 None:intergenic 40.0%
! TTAGGAGTGAGTTGAAGAAC+GGG + Chr5:96049103-96049122 None:intergenic 40.0%
! TTGTTGAAGAAGCGTAGTGA+TGG + Chr5:96048997-96049016 None:intergenic 40.0%
!! ACTATAAAGGTGTTTGCACC+TGG - Chr5:96051628-96051647 MsG0580029371.01.T01:intron 40.0%
!! CACCGACACATTTGTTTTCA+TGG - Chr5:96049616-96049635 MsG0580029371.01.T01:intron 40.0%
!! GGTTCTGAATTCAAATGGAG+TGG - Chr5:96050529-96050548 MsG0580029371.01.T01:intron 40.0%
!! GGTTTGTTGGAATCTCTTCT+TGG - Chr5:96051717-96051736 MsG0580029371.01.T01:intron 40.0%
!!! TGATGTTTTAAGGCATGTCC+AGG - Chr5:96051252-96051271 MsG0580029371.01.T01:intron 40.0%
AAAAGGAGTCCTTACAGGCA+AGG - Chr5:96053157-96053176 MsG0580029371.01.T01:CDS 45.0%
AAGGCAGCCACTGTGTTAAA+GGG - Chr5:96050614-96050633 MsG0580029371.01.T01:intron 45.0%
AATTCTTTGCTCCATGGTGC+GGG - Chr5:96050561-96050580 MsG0580029371.01.T01:intron 45.0%
ACCATGGACGATGCAAAACA+TGG - Chr5:96050874-96050893 MsG0580029371.01.T01:intron 45.0%
AGAAACCACCGCTTCTTCTT+CGG - Chr5:96052115-96052134 MsG0580029371.01.T01:intron 45.0%
ATCCAAAATGTCGGGAAGGA+AGG + Chr5:96053077-96053096 None:intergenic 45.0%
ATCCTTTCTCACGCTCTCTA+CGG - Chr5:96049067-96049086 MsG0580029371.01.T01:CDS 45.0%
CATCGTCCATGGTTCATCAA+AGG + Chr5:96050867-96050886 None:intergenic 45.0%
CGCCTTGGAATCCAAAATGT+CGG + Chr5:96053086-96053105 None:intergenic 45.0%
CTCTAGTGCGAATGATTCGA+TGG + Chr5:96052868-96052887 None:intergenic 45.0%
GAATTCTTTGCTCCATGGTG+CGG - Chr5:96050560-96050579 MsG0580029371.01.T01:intron 45.0%
GCCTTGGAATCCAAAATGTC+GGG + Chr5:96053085-96053104 None:intergenic 45.0%
TCGCACTTCAACAGGTTTGT+TGG - Chr5:96051704-96051723 MsG0580029371.01.T01:intron 45.0%
TCTGACTCCTATATGGGAGA+AGG - Chr5:96050595-96050614 MsG0580029371.01.T01:intron 45.0%
TGAAGTGCGAATTCGGCAAT+TGG + Chr5:96051694-96051713 None:intergenic 45.0%
TGGAATCCAAAATGTCGGGA+AGG + Chr5:96053081-96053100 None:intergenic 45.0%
! ACCATGTTTTGCATCGTCCA+TGG + Chr5:96050878-96050897 None:intergenic 45.0%
! ATTTTGGATTCCAAGGCGGA+GGG - Chr5:96053088-96053107 MsG0580029371.01.T01:CDS 45.0%
! CGACATTTTGGATTCCAAGG+CGG - Chr5:96053084-96053103 MsG0580029371.01.T01:CDS 45.0%
! GAAGCACTATAGCACTGTAG+TGG - Chr5:96052585-96052604 MsG0580029371.01.T01:intron 45.0%
! GTAAGGCTCTGACTCCTATA+TGG - Chr5:96050588-96050607 MsG0580029371.01.T01:intron 45.0%
! GTTTAACATCTCTGGCTCCT+TGG + Chr5:96051672-96051691 None:intergenic 45.0%
! TATAGCTCTGTCACTTCTGG+AGG + Chr5:96052912-96052931 None:intergenic 45.0%
! TCCCGACATTTTGGATTCCA+AGG - Chr5:96053081-96053100 MsG0580029371.01.T01:CDS 45.0%
! TGTTGACTGTGATGCTGACA+AGG - Chr5:96052409-96052428 MsG0580029371.01.T01:intron 45.0%
! TTCCTTCCTTCCCGACATTT+TGG - Chr5:96053072-96053091 MsG0580029371.01.T01:CDS 45.0%
! TTGGATGCTCTTTTCCACTC+AGG + Chr5:96052359-96052378 None:intergenic 45.0%
!! TATGAAGCACTGACCCTCTT+CGG - Chr5:96049542-96049561 MsG0580029371.01.T01:intron 45.0%
!!! AAAAAATAATTTAGATTTTT+GGG - Chr5:96051560-96051579 MsG0580029371.01.T01:CDS 5.0%
ATCATTCGCACTAGAGCAGC+TGG - Chr5:96052872-96052891 MsG0580029371.01.T01:intron 50.0%
CATGGACACCTGATACGATG+TGG + Chr5:96049689-96049708 None:intergenic 50.0%
CTAGCACCCTCGTAAGGAAT+TGG + Chr5:96052834-96052853 None:intergenic 50.0%
GAAGGCAGCCACTGTGTTAA+AGG - Chr5:96050613-96050632 MsG0580029371.01.T01:intron 50.0%
GCAGGAGAACAAACACTCAC+TGG + Chr5:96052939-96052958 None:intergenic 50.0%
GGAAAACCTGAGCCAGAGAT+TGG + Chr5:96050676-96050695 None:intergenic 50.0%
GGACACGTCTAATCCGAAGA+GGG + Chr5:96049558-96049577 None:intergenic 50.0%
GTCAGTGTCCACATCGTATC+AGG - Chr5:96049678-96049697 MsG0580029371.01.T01:intron 50.0%
TGCCGAATTCGCACTTCAAC+AGG - Chr5:96051696-96051715 MsG0580029371.01.T01:intron 50.0%
TGCTGATGCTCACCAATCTC+TGG - Chr5:96050661-96050680 MsG0580029371.01.T01:intron 50.0%
TTCTACCGAAGAAGAAGCGG+TGG + Chr5:96052123-96052142 None:intergenic 50.0%
! AACCGTAGAGAGCGTGAGAA+AGG + Chr5:96049072-96049091 None:intergenic 50.0%
! AGTGAGTTGAAGAACGGGTG+AGG + Chr5:96049098-96049117 None:intergenic 50.0%
! CATTTTGGATTCCAAGGCGG+AGG - Chr5:96053087-96053106 MsG0580029371.01.T01:CDS 50.0%
! CTCTTCGGATTAGACGTGTC+CGG - Chr5:96049557-96049576 MsG0580029371.01.T01:intron 50.0%
! CTGGCTCCTTGGTAATCAAC+TGG + Chr5:96051661-96051680 None:intergenic 50.0%
! GCTCCTTGGTAATCAACTGG+TGG + Chr5:96051658-96051677 None:intergenic 50.0%
! TCTTCGGATTAGACGTGTCC+GGG - Chr5:96049558-96049577 MsG0580029371.01.T01:intron 50.0%
! TTTTGGATTCCAAGGCGGAG+GGG - Chr5:96053089-96053108 MsG0580029371.01.T01:CDS 50.0%
!! TGTCGGTGTCAATGTCGTGT+CGG + Chr5:96049604-96049623 None:intergenic 50.0%
ACACACGCATGTCTGACACC+CGG + Chr5:96049579-96049598 None:intergenic 55.0%
ACGATGTGGACACTGACACG+TGG + Chr5:96049675-96049694 None:intergenic 55.0%
CGGACACGTCTAATCCGAAG+AGG + Chr5:96049559-96049578 None:intergenic 55.0%
CGTCGAGTATGGTAGGATCC+TGG + Chr5:96051273-96051292 None:intergenic 55.0%
GGAGGACCCTTGACCCTATT+TGG + Chr5:96051158-96051177 None:intergenic 55.0%
GTGGCTGCCTTCTCCCATAT+AGG + Chr5:96050605-96050624 None:intergenic 55.0%
! GCAGTTCTAGCACCCTCGTA+AGG + Chr5:96052840-96052859 None:intergenic 55.0%
! TGCTCACCAATCTCTGGCTC+AGG - Chr5:96050667-96050686 MsG0580029371.01.T01:intron 55.0%
! TCCATGGTGCGGGCACTGTA+AGG - Chr5:96050571-96050590 MsG0580029371.01.T01:intron 60.0%
! TCTGTTTCTCCCCTCCGCCT+TGG + Chr5:96053101-96053120 None:intergenic 60.0%
GCCTTACAGTGCCCGCACCA+TGG + Chr5:96050575-96050594 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 96048918 96053207 96048918 ID=MsG0580029371.01;Name=MsG0580029371.01
Chr5 mRNA 96048918 96053207 96048918 ID=MsG0580029371.01.T01;Parent=MsG0580029371.01;Name=MsG0580029371.01.T01;_AED=0.50;_eAED=0.51;_QI=2|1|0.85|1|0.83|0.85|7|0|370
Chr5 exon 96048918 96049097 96048918 ID=MsG0580029371.01.T01:exon:36120;Parent=MsG0580029371.01.T01
Chr5 exon 96049187 96049363 96049187 ID=MsG0580029371.01.T01:exon:36119;Parent=MsG0580029371.01.T01
Chr5 exon 96049695 96049794 96049695 ID=MsG0580029371.01.T01:exon:36118;Parent=MsG0580029371.01.T01
Chr5 exon 96049909 96050072 96049909 ID=MsG0580029371.01.T01:exon:36117;Parent=MsG0580029371.01.T01
Chr5 exon 96050408 96050521 96050408 ID=MsG0580029371.01.T01:exon:36116;Parent=MsG0580029371.01.T01
Chr5 exon 96051437 96051595 96051437 ID=MsG0580029371.01.T01:exon:36115;Parent=MsG0580029371.01.T01
Chr5 exon 96052987 96053207 96052987 ID=MsG0580029371.01.T01:exon:36114;Parent=MsG0580029371.01.T01
Chr5 five_prime_UTR 96053206 96053207 96053206 ID=MsG0580029371.01.T01:five_prime_utr;Parent=MsG0580029371.01.T01
Chr5 CDS 96052987 96053205 96052987 ID=MsG0580029371.01.T01:cds;Parent=MsG0580029371.01.T01
Chr5 CDS 96051437 96051595 96051437 ID=MsG0580029371.01.T01:cds;Parent=MsG0580029371.01.T01
Chr5 CDS 96050408 96050521 96050408 ID=MsG0580029371.01.T01:cds;Parent=MsG0580029371.01.T01
Chr5 CDS 96049909 96050072 96049909 ID=MsG0580029371.01.T01:cds;Parent=MsG0580029371.01.T01
Chr5 CDS 96049695 96049794 96049695 ID=MsG0580029371.01.T01:cds;Parent=MsG0580029371.01.T01
Chr5 CDS 96049187 96049363 96049187 ID=MsG0580029371.01.T01:cds;Parent=MsG0580029371.01.T01
Chr5 CDS 96048918 96049097 96048918 ID=MsG0580029371.01.T01:cds;Parent=MsG0580029371.01.T01
Gene Sequence

>MsG0580029371.01.T01

ATGACACACGTTGCAATAGAGAGTTCCTTCTTCTCTTCATACAAGAACGCCATTTTCATCACTCGCAGATTCATCCATCACTACGCTTCTTCAACAATGGCGAAACTCTCATTCATTGCTGTAACTATCTTTCTCTTCAACAATCTCATCCTTTCTCACGCTCTCTACGGTTCTTCCTCACCCGTTCTTCAACTCACTCCTAACAACTTCAAGTCCAAGGTTCTGAATTCAAATGGAGTGGTTCTTGTTGAATTCTTTGCTCCATGGTGCGGGCACTGTAAGGCTCTGACTCCTATATGGGAGAAGGCAGCCACTGTGTTAAAGGGTGTAGTTACTGTAGCAGCACTTGATGCTGATGCTCACCAATCTCTGGCTCAGGAATATGGTATTAGAGGATTTCCAACTATAAAGGTGTTTGCACCTGGAAAACCACCAGTTGATTACCAAGGAGCCAGAGATGTTAAACCAATTGCCGAATTCGCACTTCAACAGGTAAAGGCTCTTTTGAAGGAACGGTTAAATGGAAAAGCAACAGGTGGATCAAATGAAAAAAAAGAAACCACCGCTTCTTCTTCGGTAGAACTAAACTCTAGTAACTTCGATGAATTGGTTATCAAAAGCAAAGAACTTTGGATTGTAGAATTTTTCGCACCTTGGTGTGGCCATTGTAAAAAATTAGCTCCTGAGTGGAAAAGAGCATCCAATAATTTGAAAGGGAAGGTTAAACTGGGTCATGTTGACTGTGATGCTGACAAGTCTCTAATGAGCAGGTTCAATGTTCAAGGATTCCCAACAATCTTGGTATTTGGAGCCGATAAAGATACTCCAATTCCTTACGAGGGTGCTAGAACTGCATCAGCCATCGAATCATTCGCACTAGAGCAGCTGGAAACAAATGTTGCTCCTCCAGAAGTGACAGAGCTATATAGTCCAGATGTTTTGGAAGAGAAATGTGGTTCTGCTGCTATCTGTTTTGTTTCCTTCCTTCCCGACATTTTGGATTCCAAGGCGGAGGGGAGAAACAGATACCTTCAGCAGTTATTAACAGTTGCAGAGAAGTTCAAAAGGAGTCCTTACAGGCAAGGAAAAAAACATTTTGCTTACATTTCATAG

Protein sequence

>MsG0580029371.01.T01

MTHVAIESSFFSSYKNAIFITRRFIHHYASSTMAKLSFIAVTIFLFNNLILSHALYGSSSPVLQLTPNNFKSKVLNSNGVVLVEFFAPWCGHCKALTPIWEKAATVLKGVVTVAALDADAHQSLAQEYGIRGFPTIKVFAPGKPPVDYQGARDVKPIAEFALQQVKALLKERLNGKATGGSNEKKETTASSSVELNSSNFDELVIKSKELWIVEFFAPWCGHCKKLAPEWKRASNNLKGKVKLGHVDCDADKSLMSRFNVQGFPTILVFGADKDTPIPYEGARTASAIESFALEQLETNVAPPEVTELYSPDVLEEKCGSAAICFVSFLPDILDSKAEGRNRYLQQLLTVAEKFKRSPYRQGKKHFAYIS*