AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015608.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015608.01.T01 MTR_3g073250 98.450 129 2 0 41 169 412 540 1.61e-93 281
MsG0380015608.01.T01 MTR_5g060350 80.702 114 22 0 41 154 463 576 1.79e-65 210
MsG0380015608.01.T01 MTR_5g059940 78.151 119 26 0 36 154 262 380 3.47e-65 204
MsG0380015608.01.T01 MTR_0685s0020 76.724 116 27 0 36 151 128 243 3.51e-64 198
MsG0380015608.01.T01 MTR_5g059880 78.151 119 26 0 36 154 329 447 3.93e-64 204
MsG0380015608.01.T01 MTR_4g094415 74.400 125 31 1 41 165 306 429 2.61e-59 192
MsG0380015608.01.T01 MTR_5g059910 71.186 118 34 0 36 153 268 385 3.75e-57 184
MsG0380015608.01.T01 MTR_3g073250 94.805 77 4 0 41 117 425 501 5.39e-46 157
MsG0380015608.01.T01 MTR_3g096230 53.043 115 51 3 41 153 388 501 1.34e-30 116
MsG0380015608.01.T01 MTR_3g096230 53.043 115 51 3 41 153 388 501 1.60e-30 116
MsG0380015608.01.T01 MTR_8g093730 52.174 115 52 3 41 153 443 556 7.92e-30 114
MsG0380015608.01.T01 MTR_1g100250 51.818 110 45 3 54 156 569 677 1.20e-28 111
MsG0380015608.01.T01 MTR_8g098425 50.435 115 54 3 41 153 552 665 1.43e-28 111
MsG0380015608.01.T01 MTR_4g074875 46.154 130 64 3 35 160 157 284 1.03e-26 105
MsG0380015608.01.T01 MTR_4g074875 46.154 130 64 3 35 160 157 284 1.08e-26 105
MsG0380015608.01.T01 MTR_4g075410 45.528 123 63 2 33 153 155 275 1.57e-26 105
MsG0380015608.01.T01 MTR_4g075410 45.528 123 63 2 33 153 155 275 1.64e-26 105
MsG0380015608.01.T01 MTR_1g105290 48.598 107 50 3 49 152 214 318 1.96e-26 104
MsG0380015608.01.T01 MTR_7g113490 47.899 119 53 4 41 152 215 331 3.17e-26 104
MsG0380015608.01.T01 MTR_0154s0020 45.038 131 63 5 41 165 147 274 8.40e-26 100
MsG0380015608.01.T01 MTR_3g101210 41.304 138 74 3 35 166 446 582 1.11e-25 102
MsG0380015608.01.T01 MTR_3g101210 41.304 138 74 3 35 166 446 582 1.43e-25 102
MsG0380015608.01.T01 MTR_4g094415 77.049 61 14 0 41 101 306 366 1.74e-25 100
MsG0380015608.01.T01 MTR_0189s0010 46.212 132 60 6 41 165 167 294 3.08e-25 99.8
MsG0380015608.01.T01 MTR_5g017890 39.416 137 76 3 35 165 511 646 4.91e-25 100
MsG0380015608.01.T01 MTR_1g105290 48.598 107 50 3 49 152 214 318 6.42e-25 100
MsG0380015608.01.T01 MTR_1g105290 48.598 107 50 3 49 152 214 318 9.45e-25 99.8
MsG0380015608.01.T01 MTR_2g023890 42.241 116 61 4 41 154 145 256 1.56e-24 97.4
MsG0380015608.01.T01 MTR_0154s0040 44.275 131 64 5 41 165 147 274 4.76e-24 96.3
MsG0380015608.01.T01 MTR_4g049730 45.378 119 58 5 41 156 139 253 5.96e-24 96.7
MsG0380015608.01.T01 MTR_2g088020 44.348 115 58 4 41 153 147 257 1.62e-23 95.5
MsG0380015608.01.T01 MTR_3g073260 59.036 83 30 2 86 167 82 161 1.90e-23 90.9
MsG0380015608.01.T01 MTR_2g078740 43.564 101 56 1 53 153 169 268 2.94e-23 95.9
MsG0380015608.01.T01 MTR_2g078740 43.564 101 56 1 53 153 169 268 2.94e-23 95.9
MsG0380015608.01.T01 MTR_2g078740 43.564 101 56 1 53 153 169 268 2.94e-23 95.9
MsG0380015608.01.T01 MTR_2g005290 42.647 136 54 5 41 152 153 288 1.15e-21 90.1
MsG0380015608.01.T01 MTR_5g017110 39.456 147 63 6 41 165 150 292 1.48e-19 84.3
MsG0380015608.01.T01 MTR_5g017140 43.103 116 60 4 41 152 149 262 1.90e-18 80.9
MsG0380015608.01.T01 MTR_6g005210 40.336 119 63 5 41 154 227 342 4.41e-18 80.9
MsG0380015608.01.T01 MTR_5g071560 39.496 119 68 3 35 152 148 263 9.57e-18 79.7
MsG0380015608.01.T01 MTR_1g048630 35.507 138 82 4 35 169 141 274 1.20e-17 79.7
MsG0380015608.01.T01 MTR_4g005730 37.500 112 62 3 57 164 187 294 2.91e-16 75.9
MsG0380015608.01.T01 MTR_4g005730 37.500 112 62 3 57 164 187 294 3.05e-16 75.5
MsG0380015608.01.T01 MTR_4g005730 37.500 112 62 3 57 164 187 294 3.05e-16 75.5
MsG0380015608.01.T01 MTR_1g052115 36.842 114 69 2 41 153 60 171 1.76e-15 73.6
MsG0380015608.01.T01 MTR_1g052115 36.842 114 69 2 41 153 148 259 1.78e-15 73.6
MsG0380015608.01.T01 MTR_8g107000 34.028 144 83 6 34 168 864 1004 2.04e-15 73.2
MsG0380015608.01.T01 MTR_4g088750 43.529 85 45 2 57 140 364 446 4.34e-15 72.4
MsG0380015608.01.T01 MTR_4g051648 35.294 119 74 2 41 158 152 268 5.23e-15 72.0
MsG0380015608.01.T01 MTR_2g100030 35.780 109 57 3 57 153 198 305 5.45e-15 72.0
MsG0380015608.01.T01 MTR_1g071480 40.870 115 63 4 41 153 148 259 9.78e-15 71.2
MsG0380015608.01.T01 MTR_1g016300 30.882 136 89 3 33 165 797 930 1.16e-14 71.2
MsG0380015608.01.T01 MTR_4g068740 35.537 121 49 3 55 146 742 862 1.77e-14 70.5
MsG0380015608.01.T01 MTR_1g077800 35.294 102 61 2 57 154 178 278 1.98e-14 70.5
MsG0380015608.01.T01 MTR_6g090470 33.333 132 76 4 33 154 202 331 2.10e-14 70.1
MsG0380015608.01.T01 MTR_4g088755 39.130 92 53 2 57 147 203 292 2.55e-14 69.7
MsG0380015608.01.T01 MTR_4g088745 41.176 85 47 2 57 140 208 290 2.75e-14 69.7
MsG0380015608.01.T01 MTR_7g095450 36.842 114 69 2 41 153 148 259 2.78e-14 70.1
MsG0380015608.01.T01 MTR_4g068740 35.537 121 49 3 55 146 983 1103 3.37e-14 69.7
MsG0380015608.01.T01 MTR_5g023150 34.167 120 72 4 35 149 332 449 5.34e-14 68.9
MsG0380015608.01.T01 MTR_2g040510 38.318 107 56 3 57 153 229 335 5.50e-14 68.9
MsG0380015608.01.T01 MTR_7g092360 35.965 114 70 2 41 153 160 271 5.75e-14 68.9
MsG0380015608.01.T01 MTR_5g023150 34.167 120 72 4 35 149 429 546 6.30e-14 68.9
MsG0380015608.01.T01 MTR_6g006770 36.634 101 59 2 57 153 179 278 6.43e-14 68.9
MsG0380015608.01.T01 MTR_2g013900 40.217 92 52 2 57 147 325 414 1.17e-13 68.2
MsG0380015608.01.T01 MTR_6g071280 37.705 122 65 5 41 152 198 318 1.57e-13 67.4
MsG0380015608.01.T01 MTR_1g081000 34.211 114 72 2 41 153 148 259 2.14e-13 67.4
MsG0380015608.01.T01 MTR_1g081000 34.211 114 72 2 41 153 148 259 2.19e-13 67.4
MsG0380015608.01.T01 MTR_4g019410 28.777 139 93 3 33 167 155 291 2.43e-13 67.4
MsG0380015608.01.T01 MTR_7g089480 35.878 131 69 5 41 163 291 414 3.28e-13 67.0
MsG0380015608.01.T01 MTR_5g045190 35.644 101 59 3 57 154 398 495 3.47e-13 67.0
MsG0380015608.01.T01 MTR_4g019410 28.777 139 93 3 33 167 155 291 3.98e-13 66.6
MsG0380015608.01.T01 MTR_4g005830 32.847 137 78 5 41 165 220 354 4.87e-13 66.2
MsG0380015608.01.T01 MTR_8g011780 33.663 101 63 2 53 153 248 344 8.00e-13 65.5
MsG0380015608.01.T01 MTR_1g077800 35.294 102 61 2 57 154 178 278 1.24e-12 65.1
MsG0380015608.01.T01 MTR_4g125800 34.615 104 60 3 57 152 176 279 1.39e-12 64.3
MsG0380015608.01.T01 MTR_8g099095 35.938 128 71 6 41 162 212 334 1.48e-12 65.1
MsG0380015608.01.T01 MTR_4g125800 34.615 104 60 3 57 152 252 355 1.99e-12 64.3
MsG0380015608.01.T01 MTR_4g125800 34.615 104 60 3 57 152 229 332 2.05e-12 64.3
MsG0380015608.01.T01 MTR_1g052115 35.870 92 57 1 62 153 1 90 4.61e-12 63.5
MsG0380015608.01.T01 MTR_6g012990 32.540 126 82 3 32 156 152 275 6.85e-12 62.8
MsG0380015608.01.T01 MTR_1g113960 33.043 115 73 3 35 147 435 547 7.78e-12 62.8
MsG0380015608.01.T01 MTR_1g113960 33.043 115 73 3 35 147 435 547 8.41e-12 62.8
MsG0380015608.01.T01 MTR_6g012990 32.540 126 82 3 32 156 152 275 1.03e-11 62.4
MsG0380015608.01.T01 MTR_5g092810 34.559 136 78 6 33 162 230 360 1.14e-11 62.4
MsG0380015608.01.T01 MTR_3g078000 28.676 136 86 3 14 148 184 309 1.28e-11 62.0
MsG0380015608.01.T01 MTR_3g098090 35.484 124 69 6 35 152 172 290 1.47e-11 62.0
MsG0380015608.01.T01 MTR_3g095680 34.677 124 75 3 41 162 37 156 1.51e-11 62.0
MsG0380015608.01.T01 MTR_4g132860 34.737 95 59 2 47 140 232 324 1.58e-11 61.6
MsG0380015608.01.T01 MTR_1g026160 31.148 122 77 4 33 149 277 396 2.33e-11 61.2
MsG0380015608.01.T01 MTR_1g054865 37.624 101 55 4 57 153 324 420 2.97e-11 61.2
MsG0380015608.01.T01 MTR_8g024100 29.661 118 76 3 41 153 159 274 3.35e-11 61.2
MsG0380015608.01.T01 MTR_3g095680 32.117 137 87 3 28 162 168 300 3.83e-11 60.8
MsG0380015608.01.T01 MTR_3g095680 32.117 137 87 3 28 162 200 332 3.98e-11 60.8
MsG0380015608.01.T01 MTR_7g118020 33.858 127 66 6 41 156 294 413 8.55e-11 59.7
MsG0380015608.01.T01 MTR_7g106730 34.000 100 60 2 57 153 251 347 9.62e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015608.01.T01 AT4G08500 71.795 117 32 1 41 156 475 591 2.73e-55 184
MsG0380015608.01.T01 AT4G08480 67.241 116 37 1 41 155 643 758 5.04e-52 177
MsG0380015608.01.T01 AT4G08470 66.372 113 37 1 41 152 363 475 3.89e-49 165
MsG0380015608.01.T01 AT4G08470 66.372 113 37 1 41 152 445 557 1.26e-48 165
MsG0380015608.01.T01 AT4G12020 61.667 120 36 3 41 156 1693 1806 4.04e-38 138
MsG0380015608.01.T01 AT4G12020 61.667 120 36 3 41 156 1768 1881 4.17e-38 138
MsG0380015608.01.T01 AT4G12020 61.667 120 36 3 41 156 1760 1873 4.21e-38 138
MsG0380015608.01.T01 AT4G12020 61.538 104 39 1 54 156 1762 1865 1.33e-35 131
MsG0380015608.01.T01 AT4G12020 61.538 104 39 1 54 156 1754 1857 1.53e-35 131
MsG0380015608.01.T01 AT1G53570 54.783 115 49 3 41 153 358 471 4.74e-32 120
MsG0380015608.01.T01 AT1G53570 54.783 115 49 3 41 153 358 471 5.02e-32 120
MsG0380015608.01.T01 AT1G53570 54.783 115 49 3 41 153 358 471 7.60e-32 120
MsG0380015608.01.T01 AT1G53570 54.783 115 49 3 41 153 358 471 8.03e-32 120
MsG0380015608.01.T01 AT1G53570 54.783 115 49 3 41 153 358 471 8.03e-32 120
MsG0380015608.01.T01 AT1G53570 54.783 115 49 3 41 153 358 471 8.36e-32 120
MsG0380015608.01.T01 AT1G63700 50.833 120 56 3 36 153 539 657 3.84e-30 115
MsG0380015608.01.T01 AT1G63700 50.833 120 56 3 36 153 539 657 3.84e-30 115
MsG0380015608.01.T01 AT1G53570 57.576 99 40 2 56 153 348 445 7.84e-30 114
MsG0380015608.01.T01 AT1G54960 42.953 149 70 5 18 161 201 339 2.38e-29 113
MsG0380015608.01.T01 AT1G54960 42.953 149 70 5 18 161 201 339 2.38e-29 113
MsG0380015608.01.T01 AT1G09000 47.934 121 59 3 43 161 222 340 3.86e-29 112
MsG0380015608.01.T01 AT1G09000 47.934 121 59 3 43 161 222 340 5.23e-29 112
MsG0380015608.01.T01 AT3G13530 46.825 126 55 3 38 153 152 275 9.63e-27 105
MsG0380015608.01.T01 AT3G06030 46.610 118 55 4 41 152 215 330 7.47e-26 103
MsG0380015608.01.T01 AT5G66850 42.537 134 69 4 35 162 485 616 7.68e-26 103
MsG0380015608.01.T01 AT5G66850 42.537 134 69 4 35 162 485 616 1.06e-25 102
MsG0380015608.01.T01 AT3G07980 44.444 126 58 3 38 153 152 275 5.94e-25 100
MsG0380015608.01.T01 AT3G07980 44.444 126 58 3 38 153 152 275 6.30e-25 100
MsG0380015608.01.T01 AT3G15220 44.554 101 55 1 53 153 169 268 6.59e-25 100
MsG0380015608.01.T01 AT1G05100 44.828 116 58 3 41 152 150 263 7.15e-25 98.6
MsG0380015608.01.T01 AT1G53165 44.554 101 55 1 53 153 169 268 3.17e-24 98.6
MsG0380015608.01.T01 AT1G53165 44.554 101 55 1 53 153 169 268 3.18e-24 98.6
MsG0380015608.01.T01 AT1G53165 44.554 101 55 1 53 153 169 268 3.18e-24 98.6
MsG0380015608.01.T01 AT5G55090 39.844 128 73 3 35 160 139 264 4.64e-24 97.4
MsG0380015608.01.T01 AT5G55090 40.157 127 72 3 35 159 201 325 5.82e-24 97.4
MsG0380015608.01.T01 AT2G32510 46.535 101 47 3 57 152 161 259 6.37e-23 93.6
MsG0380015608.01.T01 AT4G26890 40.310 129 70 4 35 161 139 262 1.85e-22 93.2
MsG0380015608.01.T01 AT5G67080 42.400 125 62 4 36 152 147 269 1.03e-21 90.1
MsG0380015608.01.T01 AT3G50310 40.458 131 67 4 37 158 146 274 1.12e-20 87.4
MsG0380015608.01.T01 AT4G36950 45.000 120 54 5 41 152 150 265 5.94e-20 85.1
MsG0380015608.01.T01 AT3G07980 46.739 92 47 1 62 153 1 90 9.20e-20 85.9
MsG0380015608.01.T01 AT2G42550 45.361 97 51 1 57 153 181 275 2.69e-19 83.6
MsG0380015608.01.T01 AT1G07150 40.741 108 58 4 56 162 185 287 1.24e-18 82.4
MsG0380015608.01.T01 AT1G07150 40.741 108 58 4 56 162 171 273 1.58e-18 82.0
MsG0380015608.01.T01 AT2G30040 44.898 98 50 3 56 152 176 270 3.60e-18 80.9
MsG0380015608.01.T01 AT5G27510 40.196 102 59 1 57 158 176 275 1.49e-17 78.2
MsG0380015608.01.T01 AT3G46140 38.281 128 69 4 34 153 245 370 3.63e-17 77.8
MsG0380015608.01.T01 AT5G40440 40.000 120 62 6 41 154 144 259 1.21e-16 76.6
MsG0380015608.01.T01 AT5G40440 43.564 101 51 4 57 154 244 341 1.30e-16 76.6
MsG0380015608.01.T01 AT5G40440 43.564 101 51 4 57 154 244 341 1.30e-16 76.6
MsG0380015608.01.T01 AT5G40440 40.000 120 62 6 41 154 208 323 1.35e-16 76.6
MsG0380015608.01.T01 AT5G40440 40.000 120 62 6 41 154 208 323 1.35e-16 76.6
MsG0380015608.01.T01 AT5G40440 40.000 120 62 6 41 154 208 323 1.35e-16 76.6
MsG0380015608.01.T01 AT2G41910 38.393 112 57 3 57 164 185 288 1.90e-16 75.9
MsG0380015608.01.T01 AT1G69220 39.316 117 63 5 57 168 408 521 2.58e-16 75.9
MsG0380015608.01.T01 AT1G50240 35.821 134 79 4 35 165 140 269 1.24e-15 73.9
MsG0380015608.01.T01 AT1G50240 35.821 134 79 4 35 165 140 269 1.24e-15 73.9
MsG0380015608.01.T01 AT1G18160 32.331 133 84 4 34 162 850 980 2.30e-15 73.2
MsG0380015608.01.T01 AT4G14480 37.273 110 55 3 57 153 186 294 3.20e-15 72.8
MsG0380015608.01.T01 AT4G10730 37.624 101 58 2 57 153 210 309 3.68e-15 72.4
MsG0380015608.01.T01 AT1G69220 38.462 117 64 5 57 168 381 494 3.68e-15 72.8
MsG0380015608.01.T01 AT2G34290 37.984 129 68 4 31 153 143 265 5.00e-15 70.9
MsG0380015608.01.T01 AT4G29810 41.509 106 52 6 57 154 229 332 6.42e-15 71.6
MsG0380015608.01.T01 AT4G29810 41.509 106 52 6 57 154 238 341 6.52e-15 71.6
MsG0380015608.01.T01 AT1G79640 39.286 112 60 3 57 164 176 283 6.56e-15 72.0
MsG0380015608.01.T01 AT1G79640 39.286 112 60 3 57 164 176 283 6.56e-15 72.0
MsG0380015608.01.T01 AT1G79640 39.286 112 60 3 57 164 176 283 6.56e-15 72.0
MsG0380015608.01.T01 AT1G79640 39.286 112 60 3 57 164 179 286 6.69e-15 72.0
MsG0380015608.01.T01 AT1G73660 34.328 134 80 5 34 162 883 1013 6.77e-15 72.0
MsG0380015608.01.T01 AT1G79640 39.286 112 60 3 57 164 176 283 6.82e-15 71.6
MsG0380015608.01.T01 AT5G27790 40.323 124 62 5 41 158 179 296 7.06e-15 71.2
MsG0380015608.01.T01 AT1G79640 39.286 112 60 3 57 164 176 283 7.11e-15 71.6
MsG0380015608.01.T01 AT5G14720 37.624 101 58 2 57 153 179 278 7.86e-15 71.6
MsG0380015608.01.T01 AT5G14720 37.624 101 58 2 57 153 179 278 7.86e-15 71.6
MsG0380015608.01.T01 AT3G46160 42.718 103 49 4 57 153 235 333 8.96e-15 71.2
MsG0380015608.01.T01 AT2G41930 33.333 138 79 5 32 161 153 285 1.24e-14 70.5
MsG0380015608.01.T01 AT3G63280 37.288 118 71 2 41 157 148 263 2.34e-14 70.1
MsG0380015608.01.T01 AT3G63280 37.288 118 71 2 41 157 148 263 2.34e-14 70.1
MsG0380015608.01.T01 AT3G63280 37.288 118 71 2 41 157 148 263 2.34e-14 70.1
MsG0380015608.01.T01 AT3G44200 33.613 119 76 2 41 158 152 268 2.52e-14 70.1
MsG0380015608.01.T01 AT3G44200 33.613 119 76 2 41 158 152 268 2.52e-14 70.1
MsG0380015608.01.T01 AT4G23650 35.433 127 73 4 41 162 224 346 2.52e-14 70.1
MsG0380015608.01.T01 AT4G04632 34.259 108 65 3 62 165 1 106 5.23e-14 65.1
MsG0380015608.01.T01 AT3G20860 36.975 119 72 2 41 158 147 263 8.90e-14 68.6
MsG0380015608.01.T01 AT5G11850 33.051 118 74 3 33 147 743 858 9.21e-14 68.6
MsG0380015608.01.T01 AT1G51660 36.842 133 71 6 41 162 215 345 1.29e-13 67.8
MsG0380015608.01.T01 AT3G63280 37.719 114 68 2 41 153 202 313 1.66e-13 67.8
MsG0380015608.01.T01 AT3G45670 36.220 127 71 5 34 152 241 365 1.98e-13 67.4
MsG0380015608.01.T01 AT4G10730 37.624 101 58 2 57 153 190 289 2.21e-13 67.4
MsG0380015608.01.T01 AT4G24100 39.175 97 54 2 57 149 212 307 2.83e-13 67.0
MsG0380015608.01.T01 AT4G24100 39.175 97 54 2 57 149 196 291 2.85e-13 67.0
MsG0380015608.01.T01 AT4G24100 39.175 97 54 2 57 149 196 291 2.97e-13 67.0
MsG0380015608.01.T01 AT4G24100 39.175 97 54 2 57 149 212 307 3.10e-13 67.0
MsG0380015608.01.T01 AT2G05060 35.135 111 68 2 57 167 184 290 5.08e-13 65.9
MsG0380015608.01.T01 AT3G04810 39.130 115 65 4 41 153 148 259 6.94e-13 65.9
MsG0380015608.01.T01 AT3G04810 39.130 115 65 4 41 153 148 259 6.94e-13 65.9
MsG0380015608.01.T01 AT3G04810 39.130 115 65 4 41 153 148 259 6.94e-13 65.9
MsG0380015608.01.T01 AT5G12090 40.541 74 44 0 79 152 220 293 7.36e-13 65.5
MsG0380015608.01.T01 AT2G41920 41.414 99 50 3 57 153 187 279 9.14e-13 65.1
MsG0380015608.01.T01 AT2G35890 34.545 110 64 3 57 162 295 400 1.26e-12 65.1
MsG0380015608.01.T01 AT2G35890 34.545 110 64 3 57 162 295 400 1.26e-12 65.1
MsG0380015608.01.T01 AT5G58950 39.785 93 53 2 57 148 371 461 1.30e-12 65.1
MsG0380015608.01.T01 AT5G04870 37.398 123 66 6 37 153 292 409 1.45e-12 65.1
MsG0380015608.01.T01 AT3G21220 31.967 122 71 4 41 152 206 325 1.47e-12 64.7
MsG0380015608.01.T01 AT3G21220 31.967 122 71 4 41 152 206 325 1.47e-12 64.7
MsG0380015608.01.T01 AT4G35780 33.621 116 73 3 35 148 426 539 1.65e-12 64.7
MsG0380015608.01.T01 AT1G04210 31.707 123 53 2 55 146 979 1101 2.37e-12 64.7
MsG0380015608.01.T01 AT1G61950 36.036 111 61 5 57 162 262 367 3.60e-12 63.9
MsG0380015608.01.T01 AT1G54510 37.391 115 67 4 41 153 148 259 6.12e-12 63.2
MsG0380015608.01.T01 AT1G54510 37.391 115 67 4 41 153 148 259 6.12e-12 63.2
MsG0380015608.01.T01 AT1G54510 37.391 115 67 4 41 153 148 259 6.12e-12 63.2
MsG0380015608.01.T01 AT1G54510 37.391 115 67 4 41 153 148 259 6.12e-12 63.2
MsG0380015608.01.T01 AT4G04720 36.634 101 56 3 57 153 243 339 6.53e-12 63.2
MsG0380015608.01.T01 AT4G04720 36.634 101 56 3 57 153 243 339 6.53e-12 63.2
MsG0380015608.01.T01 AT5G28290 37.391 115 67 4 41 153 148 259 6.65e-12 63.2
MsG0380015608.01.T01 AT5G28290 37.391 115 67 4 41 153 148 259 7.88e-12 62.8
MsG0380015608.01.T01 AT5G28290 37.391 115 67 4 41 153 148 259 7.88e-12 62.8
MsG0380015608.01.T01 AT5G12180 36.585 123 69 5 37 154 215 333 9.74e-12 62.8
MsG0380015608.01.T01 AT1G18350 34.400 125 72 5 41 156 184 307 1.48e-11 61.6
MsG0380015608.01.T01 AT3G49370 35.433 127 67 5 35 153 286 405 2.03e-11 61.6
MsG0380015608.01.T01 AT5G19360 36.508 126 65 6 37 154 210 328 2.61e-11 61.2
MsG0380015608.01.T01 AT1G62400 34.737 95 59 2 47 140 238 330 2.86e-11 61.2
MsG0380015608.01.T01 AT3G53930 32.323 99 62 2 57 152 181 277 3.14e-11 61.2
MsG0380015608.01.T01 AT3G24715 33.333 108 70 2 35 140 982 1089 3.21e-11 61.2
MsG0380015608.01.T01 AT3G24715 33.333 108 70 2 35 140 982 1089 3.21e-11 61.2
MsG0380015608.01.T01 AT3G24715 33.333 108 70 2 35 140 982 1089 3.21e-11 61.2
MsG0380015608.01.T01 AT3G53930 32.323 99 62 2 57 152 181 277 3.39e-11 61.2
MsG0380015608.01.T01 AT4G29810 40.404 99 49 6 57 147 238 334 4.26e-11 60.5
MsG0380015608.01.T01 AT5G24430 33.858 127 69 5 35 153 287 406 6.22e-11 60.5
MsG0380015608.01.T01 AT5G18700 32.773 119 70 4 39 151 138 252 7.80e-11 60.1
MsG0380015608.01.T01 AT4G21940 33.065 124 74 4 35 153 242 361 9.79e-11 59.7

Find 69 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATTGGAGTACGGAATT+TGG 0.172872 3:+72480402 None:intergenic
CCAAATTCCGTACTCCAATT+TGG 0.220367 3:-72480402 MsG0380015608.01.T01:CDS
GTCTGTCAAACTTGCAGATT+TGG 0.235625 3:-72482019 MsG0380015608.01.T01:CDS
TGATTTAACATCGTTCAATT+TGG 0.246228 3:+72481851 None:intergenic
GAGTCTGGGATGCACTGTTC+TGG 0.281175 3:-72480438 MsG0380015608.01.T01:CDS
GCATCTCTTGAAAGACTATC+AGG 0.286814 3:+72479877 None:intergenic
ACGGGCTTCCAGCCGATATT+TGG 0.299274 3:-72480460 MsG0380015608.01.T01:CDS
TCCAGCCGATATTTGGAGTC+TGG 0.302263 3:-72480453 MsG0380015608.01.T01:CDS
TCTTCATCTCCTTACATTCA+TGG 0.333112 3:-72479754 MsG0380015608.01.T01:CDS
CTGCTTTGGATCAATTGATA+TGG 0.335311 3:-72479097 MsG0380015608.01.T01:three_prime_UTR
CATGCAAGGGAACAGCATTC+TGG 0.339790 3:-72481830 MsG0380015608.01.T01:CDS
GACACATACAGGTTCCAAAT+TGG 0.365263 3:+72480388 None:intergenic
CTACCACAAAAGCATTTGTT+TGG 0.368040 3:+72482331 None:intergenic
TATCAAATGTGCAAATATAT+TGG 0.378073 3:-72482055 MsG0380015608.01.T01:CDS
TACCACAAAAGCATTTGTTT+GGG 0.389117 3:+72482332 None:intergenic
AATAATATTTACAGTAAGAA+TGG 0.396887 3:+72478929 None:intergenic
TCTGTCAAACTTGCAGATTT+GGG 0.397754 3:-72482018 MsG0380015608.01.T01:CDS
CTTGAAAGACTATCAGGAAT+AGG 0.399061 3:+72479883 None:intergenic
AGTTGGCTCATTTGACTAGA+AGG 0.406443 3:+72479008 None:intergenic
CCCCTTCTGCCATGAATGTA+AGG 0.410368 3:+72479745 None:intergenic
GCATTTGTTTGGGGCAAGAA+AGG 0.423501 3:+72482342 None:intergenic
AAGACTGGGAAAGTGGCCTT+TGG 0.451059 3:+72479773 None:intergenic
GAAAGTGGCCTTTGGAGAAA+TGG 0.456847 3:+72479781 None:intergenic
GAATGTAAGGAGATGAAGAC+TGG 0.460121 3:+72479758 None:intergenic
ATGCAGGCATTATTTAGAAT+AGG 0.461360 3:-72479922 MsG0380015608.01.T01:CDS
GAGGAAAGAACAAAGGTTAC+GGG 0.462775 3:-72480478 MsG0380015608.01.T01:CDS
GCATCCCAGACTCCAAATAT+CGG 0.464258 3:+72480448 None:intergenic
GATCATCAGGATTAACTTGA+AGG 0.467582 3:+72479833 None:intergenic
GGAATGGCAATGGCAATCAT+TGG 0.471743 3:+72482363 None:intergenic
CCAGCCGATATTTGGAGTCT+GGG 0.474961 3:-72480452 MsG0380015608.01.T01:CDS
GGCTCATTTGACTAGAAGGC+GGG 0.475791 3:+72479012 None:intergenic
TGACATTGTCTTTGCTTCAA+AGG 0.491823 3:+72479052 None:intergenic
AGAGGAAAGAACAAAGGTTA+CGG 0.501180 3:-72480479 MsG0380015608.01.T01:CDS
CCCAGACTCCAAATATCGGC+TGG 0.502333 3:+72480452 None:intergenic
CTCCTTACATTCATGGCAGA+AGG 0.508424 3:-72479747 MsG0380015608.01.T01:CDS
ACTGTTCTGGAGATGCTAAC+GGG 0.513889 3:-72480425 MsG0380015608.01.T01:CDS
GCAGCAGTAGAACGATCATC+AGG 0.533757 3:+72479820 None:intergenic
GCATTATTTAGAATAGGAAA+AGG 0.537205 3:-72479916 MsG0380015608.01.T01:CDS
CACTGTTCTGGAGATGCTAA+CGG 0.541651 3:-72480426 MsG0380015608.01.T01:CDS
TCCTTACATTCATGGCAGAA+GGG 0.550032 3:-72479746 MsG0380015608.01.T01:CDS
GAACGATGTTAAATCATGCA+AGG 0.550856 3:-72481844 MsG0380015608.01.T01:CDS
TTGCAGATTTGGGTTAGCAA+AGG 0.555821 3:-72482008 MsG0380015608.01.T01:intron
GGAGATGAAGACTGGGAAAG+TGG 0.561999 3:+72479766 None:intergenic
TCAACTATGAAACATAATGA+AGG 0.562900 3:-72479706 MsG0380015608.01.T01:intron
TAAACCATCCATTTCTCCAA+AGG 0.566996 3:-72479789 MsG0380015608.01.T01:CDS
AAAATGCAGAGCTTAGATGT+TGG 0.577212 3:-72478977 MsG0380015608.01.T01:three_prime_UTR
GTGGCCTTTGGAGAAATGGA+TGG 0.577443 3:+72479785 None:intergenic
CTCATTTGACTAGAAGGCGG+GGG 0.586149 3:+72479014 None:intergenic
AACGATGTTAAATCATGCAA+GGG 0.593956 3:-72481843 MsG0380015608.01.T01:CDS
AGACTATCAGGAATAGGAGG+TGG 0.594613 3:+72479889 None:intergenic
ACAGGTTCCAAATTGGAGTA+CGG 0.596468 3:+72480395 None:intergenic
ACCACAAAAGCATTTGTTTG+GGG 0.599878 3:+72482333 None:intergenic
GCTCATTTGACTAGAAGGCG+GGG 0.600650 3:+72479013 None:intergenic
CCTTACATTCATGGCAGAAG+GGG 0.605404 3:-72479745 MsG0380015608.01.T01:CDS
AAAGGACAAATCATCATCTG+TGG 0.605692 3:+72479070 None:intergenic
GAAAGACTATCAGGAATAGG+AGG 0.610860 3:+72479886 None:intergenic
AATGTAAGGAGATGAAGACT+GGG 0.615369 3:+72479759 None:intergenic
ATGTATATGCAGGTTGTGAG+AGG 0.617995 3:-72480497 MsG0380015608.01.T01:intron
CAAGGGAACAGCATTCTGGA+TGG 0.621003 3:-72481826 MsG0380015608.01.T01:CDS
AATATATTGGTGCATGCAAG+TGG 0.625718 3:-72482042 MsG0380015608.01.T01:CDS
TGTTTGGGGCAAGAAAGGAA+TGG 0.625899 3:+72482347 None:intergenic
AGCATTCTGGATGGCCCCTG+AGG 0.633417 3:-72481817 MsG0380015608.01.T01:intron
TGGCTCATTTGACTAGAAGG+CGG 0.637438 3:+72479011 None:intergenic
GGGCAAGAAAGGAATGGCAA+TGG 0.638166 3:+72482353 None:intergenic
ATGTTGGAACAACAGTGGCA+AGG 0.658982 3:-72478961 MsG0380015608.01.T01:three_prime_UTR
ATATATTGGTGCATGCAAGT+GGG 0.677730 3:-72482041 MsG0380015608.01.T01:CDS
CTTAGATGTTGGAACAACAG+TGG 0.700001 3:-72478966 MsG0380015608.01.T01:three_prime_UTR
GTTGTGAGAGGAAAGAACAA+AGG 0.709086 3:-72480485 MsG0380015608.01.T01:CDS
AGATTGAAGGCAAACCTCAG+GGG 0.724318 3:+72481803 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAATATACACAAAAA+TGG + Chr3:72482286-72482305 None:intergenic 10.0%
!! TTATAGTTATAAAAACAAAA+TGG - Chr3:72481131-72481150 MsG0380015608.01.T01:intron 10.0%
!!! AGATAAATTTTAATATTTCA+TGG + Chr3:72481165-72481184 None:intergenic 10.0%
!! AATAATATTTACAGTAAGAA+TGG + Chr3:72482253-72482272 None:intergenic 15.0%
!! AATTATATTTCTCCAATTTA+AGG - Chr3:72479099-72479118 MsG0380015608.01.T01:three_prime_UTR 15.0%
!! ATTATATTTCTCCAATTTAA+GGG - Chr3:72479100-72479119 MsG0380015608.01.T01:three_prime_UTR 15.0%
!! TAGTAAATATACCATTAATT+GGG - Chr3:72480330-72480349 MsG0380015608.01.T01:intron 15.0%
!! TTAATTTACAAATAAATAGC+AGG + Chr3:72481045-72481064 None:intergenic 15.0%
!! TTAGTAAATATACCATTAAT+TGG - Chr3:72480329-72480348 MsG0380015608.01.T01:intron 15.0%
!!! AATTTTCTAATGATTAAAGA+AGG - Chr3:72478890-72478909 MsG0380015608.01.T01:three_prime_UTR 15.0%
!!! TCTGTTTTGAAAAAATTATT+TGG - Chr3:72478978-72478997 MsG0380015608.01.T01:three_prime_UTR 15.0%
!!! TGAAATTTTCTAAAATTATC+TGG - Chr3:72480056-72480075 MsG0380015608.01.T01:intron 15.0%
!!! TTATTTGTAAATTAACTTGT+GGG - Chr3:72481050-72481069 MsG0380015608.01.T01:intron 15.0%
!!! TTTATTTGTAAATTAACTTG+TGG - Chr3:72481049-72481068 MsG0380015608.01.T01:intron 15.0%
!! AAAAATAATATGACACATAC+AGG + Chr3:72480805-72480824 None:intergenic 20.0%
!! AAACGTTCAAATTTATTTCA+TGG - Chr3:72479433-72479452 MsG0380015608.01.T01:intron 20.0%
!! AAATAAATAGCAGGAAAATT+AGG + Chr3:72481036-72481055 None:intergenic 20.0%
!! ACCAAATGAAAATGAAATTA+AGG - Chr3:72479984-72480003 MsG0380015608.01.T01:intron 20.0%
!! ATTATTAATCATGTATATGC+AGG - Chr3:72480672-72480691 MsG0380015608.01.T01:intron 20.0%
!! ATTTCTATATTTAAATTGGG+TGG - Chr3:72481689-72481708 MsG0380015608.01.T01:intron 20.0%
!! CCAAATGAAAATGAAATTAA+GGG - Chr3:72479985-72480004 MsG0380015608.01.T01:intron 20.0%
!! GTATATTTACTAAATCTCTT+GGG + Chr3:72480322-72480341 None:intergenic 20.0%
!! TATATTTACTAAATCTCTTG+GGG + Chr3:72480321-72480340 None:intergenic 20.0%
!! TATCAAATGTGCAAATATAT+TGG - Chr3:72479124-72479143 MsG0380015608.01.T01:three_prime_UTR 20.0%
!! TCAATCAAAAAATCAAAAGT+CGG + Chr3:72481221-72481240 None:intergenic 20.0%
!! TGAATAGTTACAATACAATT+GGG - Chr3:72478951-72478970 MsG0380015608.01.T01:three_prime_UTR 20.0%
!! TTGAATAGTTACAATACAAT+TGG - Chr3:72478950-72478969 MsG0380015608.01.T01:three_prime_UTR 20.0%
!! TTTCTATATTTAAATTGGGT+GGG - Chr3:72481690-72481709 MsG0380015608.01.T01:intron 20.0%
!!! AAAGTATCTACATAGTTTAA+GGG - Chr3:72479678-72479697 MsG0380015608.01.T01:intron 20.0%
!!! AAATATAACAACATTTTGCT+AGG - Chr3:72480611-72480630 MsG0380015608.01.T01:intron 20.0%
!!! AATGTTTTTCTCTGAAAATT+TGG - Chr3:72482351-72482370 MsG0380015608.01.T01:CDS 20.0%
!!! CATTTTCATTTGGTTTAATA+TGG + Chr3:72479978-72479997 None:intergenic 20.0%
!!! TTGATAATTTATGTAGAAGT+TGG + Chr3:72479472-72479491 None:intergenic 20.0%
!!! TTTTAAATGAAAGGATCAAA+TGG + Chr3:72480439-72480458 None:intergenic 20.0%
! AAAAGCAAAAACTTATGTAG+AGG + Chr3:72480960-72480979 None:intergenic 25.0%
! AAAATCATCGTAACATAACA+TGG - Chr3:72481860-72481879 MsG0380015608.01.T01:intron 25.0%
! AATGACATGGACAAAAAATA+TGG - Chr3:72481622-72481641 MsG0380015608.01.T01:intron 25.0%
! ACAATATTATATGCATGCAT+TGG - Chr3:72481836-72481855 MsG0380015608.01.T01:CDS 25.0%
! ACATTTGATATCCCTTAAAT+TGG + Chr3:72479114-72479133 None:intergenic 25.0%
! ATTGCTCATTAGTTATGAAT+GGG + Chr3:72481605-72481624 None:intergenic 25.0%
! CAATATTATATGCATGCATT+GGG - Chr3:72481837-72481856 MsG0380015608.01.T01:CDS 25.0%
! CCAACATTTCTATGTTATAT+AGG + Chr3:72481104-72481123 None:intergenic 25.0%
! CCTATATAACATAGAAATGT+TGG - Chr3:72481101-72481120 MsG0380015608.01.T01:intron 25.0%
! GGTATATTTACTAAATCTCT+TGG + Chr3:72480323-72480342 None:intergenic 25.0%
! GTGATTTCTCTTGAAATAAA+AGG - Chr3:72480374-72480393 MsG0380015608.01.T01:intron 25.0%
! GTTCATTAAGTTAAGATTGA+AGG + Chr3:72479392-72479411 None:intergenic 25.0%
! GTTGAAATAAATTCAAACTG+AGG - Chr3:72480294-72480313 MsG0380015608.01.T01:intron 25.0%
! TAACCATTATTAAACAGTTC+AGG - Chr3:72480989-72481008 MsG0380015608.01.T01:intron 25.0%
! TAGTTATACTTCTCTTTCAA+GGG - Chr3:72479201-72479220 MsG0380015608.01.T01:intron 25.0%
! TCAACTATGAAACATAATGA+AGG - Chr3:72481473-72481492 MsG0380015608.01.T01:intron 25.0%
! TGATTTAACATCGTTCAATT+TGG + Chr3:72479331-72479350 None:intergenic 25.0%
! TTAGTTATACTTCTCTTTCA+AGG - Chr3:72479200-72479219 MsG0380015608.01.T01:intron 25.0%
! TTCAGAGAAAAACATTAACA+TGG + Chr3:72482347-72482366 None:intergenic 25.0%
! TTCTATATTTAAATTGGGTG+GGG - Chr3:72481691-72481710 MsG0380015608.01.T01:intron 25.0%
!! AAATGGCAAATGCATATTTT+GGG + Chr3:72480422-72480441 None:intergenic 25.0%
!! ATTTTCACTCTTAAAATTGC+TGG - Chr3:72481964-72481983 MsG0380015608.01.T01:intron 25.0%
!! CAAAGTATCTACATAGTTTA+AGG - Chr3:72479677-72479696 MsG0380015608.01.T01:intron 25.0%
!! CAATTTTCAAAGTTTCAGTT+TGG - Chr3:72480893-72480912 MsG0380015608.01.T01:intron 25.0%
!! CCCTTAATTTCATTTTCATT+TGG + Chr3:72479988-72480007 None:intergenic 25.0%
!! CTTTCATTTAAAACAAAGCT+GGG - Chr3:72480446-72480465 MsG0380015608.01.T01:CDS 25.0%
!! GCATTATTTAGAATAGGAAA+AGG - Chr3:72481263-72481282 MsG0380015608.01.T01:intron 25.0%
!! TGAACGAAAATACTGATTAA+TGG - Chr3:72479407-72479426 MsG0380015608.01.T01:intron 25.0%
!! TTATAGAGCATTATCAGAAA+TGG + Chr3:72479293-72479312 None:intergenic 25.0%
!! TTGAAAGAGAAGTATAACTA+AGG + Chr3:72479201-72479220 None:intergenic 25.0%
!!! ATATTATTTTTGCTCCCATT+AGG - Chr3:72480814-72480833 MsG0380015608.01.T01:intron 25.0%
!!! GATGTTTAAAATTCCAGTTT+TGG - Chr3:72481647-72481666 MsG0380015608.01.T01:intron 25.0%
!!! GCAATTTTAAGAGTGAAAAT+TGG + Chr3:72481964-72481983 None:intergenic 25.0%
!!! TATTATTTTTGCTCCCATTA+GGG - Chr3:72480815-72480834 MsG0380015608.01.T01:intron 25.0%
!!! TATTCCTTTTCATAGTTTGT+CGG + Chr3:72481768-72481787 None:intergenic 25.0%
!!! TGAAGGTGAATATTTTTACA+TGG - Chr3:72481490-72481509 MsG0380015608.01.T01:intron 25.0%
!!! TTTTCTAAAATTATCTGGCT+TGG - Chr3:72480061-72480080 MsG0380015608.01.T01:intron 25.0%
AAAAACAAGCAAACTCTGAA+TGG + Chr3:72482041-72482060 None:intergenic 30.0%
AACGATGTTAAATCATGCAA+GGG - Chr3:72479336-72479355 MsG0380015608.01.T01:intron 30.0%
AATGAAATTAAGGGCTAACA+TGG - Chr3:72479994-72480013 MsG0380015608.01.T01:intron 30.0%
ACTATGAAAAGGAATAAAGC+AGG - Chr3:72481772-72481791 MsG0380015608.01.T01:intron 30.0%
AGAAAAGGGAAACATAATCA+GGG + Chr3:72480853-72480872 None:intergenic 30.0%
AGTGTCATCATGATATAAAG+AGG + Chr3:72481540-72481559 None:intergenic 30.0%
AGTGTGATTTCACTCTTATT+TGG - Chr3:72481718-72481737 MsG0380015608.01.T01:intron 30.0%
ATAACCGACAAACTATGAAA+AGG - Chr3:72481761-72481780 MsG0380015608.01.T01:intron 30.0%
ATAACTAATGAGCAATGACA+TGG - Chr3:72481609-72481628 MsG0380015608.01.T01:intron 30.0%
ATCACATTTCTATACACCAT+TGG - Chr3:72480190-72480209 MsG0380015608.01.T01:intron 30.0%
ATGAAATTAAGGGCTAACAT+GGG - Chr3:72479995-72480014 MsG0380015608.01.T01:intron 30.0%
ATGCTCTATAAATTGCTTTC+AGG - Chr3:72479302-72479321 MsG0380015608.01.T01:intron 30.0%
ATTGAATTGATCTCTTTCAG+TGG - Chr3:72481883-72481902 MsG0380015608.01.T01:intron 30.0%
CATTGCTCATTAGTTATGAA+TGG + Chr3:72481606-72481625 None:intergenic 30.0%
TAGCAGGAAAATTAGGTATT+TGG + Chr3:72481029-72481048 None:intergenic 30.0%
TAGCCTGAACTGTTTAATAA+TGG + Chr3:72480995-72481014 None:intergenic 30.0%
TCATCATTTCAAAATTCCAC+CGG + Chr3:72481816-72481835 None:intergenic 30.0%
TCCAGGCTATTAACATAATA+CGG + Chr3:72479522-72479541 None:intergenic 30.0%
TCTTTATATCATGATGACAC+TGG - Chr3:72481539-72481558 MsG0380015608.01.T01:intron 30.0%
TTACTTCAAGAACTTCAACT+AGG + Chr3:72480527-72480546 None:intergenic 30.0%
! ATGCAGGCATTATTTAGAAT+AGG - Chr3:72481257-72481276 MsG0380015608.01.T01:intron 30.0%
! ATTAGGTATTTGGAGCAAAA+TGG + Chr3:72481019-72481038 None:intergenic 30.0%
! CAAATGGCAAATGCATATTT+TGG + Chr3:72480423-72480442 None:intergenic 30.0%
! CCTTTCATTTAAAACAAAGC+TGG - Chr3:72480445-72480464 MsG0380015608.01.T01:CDS 30.0%
! GTGTGATTTCACTCTTATTT+GGG - Chr3:72481719-72481738 MsG0380015608.01.T01:intron 30.0%
! GTTGTTATATTTTCTGTCAG+AGG + Chr3:72480603-72480622 None:intergenic 30.0%
! TGAATGGGAATTCTTTTGAA+AGG + Chr3:72481590-72481609 None:intergenic 30.0%
! TGTGATTTCACTCTTATTTG+GGG - Chr3:72481720-72481739 MsG0380015608.01.T01:intron 30.0%
! TTAGGTATTTGGAGCAAAAT+GGG + Chr3:72481018-72481037 None:intergenic 30.0%
!! TACCACAAAAGCATTTGTTT+GGG + Chr3:72478850-72478869 None:intergenic 30.0%
!!! ATTATTTTTGCTCCCATTAG+GGG - Chr3:72480816-72480835 MsG0380015608.01.T01:intron 30.0%
!!! CCAGCTTTGTTTTAAATGAA+AGG + Chr3:72480448-72480467 None:intergenic 30.0%
!!! CTGCATTTTTTTTCATCAGT+TGG + Chr3:72482191-72482210 None:intergenic 30.0%
!!! TTTTAATGTTGTTTCCACCA+TGG - Chr3:72480565-72480584 MsG0380015608.01.T01:intron 30.0%
AAAATGCAGAGCTTAGATGT+TGG - Chr3:72482202-72482221 MsG0380015608.01.T01:intron 35.0%
AAAGGACAAATCATCATCTG+TGG + Chr3:72482112-72482131 None:intergenic 35.0%
AATATATTGGTGCATGCAAG+TGG - Chr3:72479137-72479156 MsG0380015608.01.T01:three_prime_UTR 35.0%
AATGTAAGGAGATGAAGACT+GGG + Chr3:72481423-72481442 None:intergenic 35.0%
ACCGTATTATGTTAATAGCC+TGG - Chr3:72479518-72479537 MsG0380015608.01.T01:intron 35.0%
AGAGATCTCAAAGACATGAT+AGG + Chr3:72479022-72479041 None:intergenic 35.0%
AGAGGAAAGAACAAAGGTTA+CGG - Chr3:72480700-72480719 MsG0380015608.01.T01:intron 35.0%
AGCAACAATTGCTGCAAAAA+TGG + Chr3:72482004-72482023 None:intergenic 35.0%
ATATATTGGTGCATGCAAGT+GGG - Chr3:72479138-72479157 MsG0380015608.01.T01:three_prime_UTR 35.0%
CAGAAAAGGGAAACATAATC+AGG + Chr3:72480854-72480873 None:intergenic 35.0%
CCTAATTACACAACTGATAC+AGG + Chr3:72479052-72479071 None:intergenic 35.0%
CCTGTATCAGTTGTGTAATT+AGG - Chr3:72479049-72479068 MsG0380015608.01.T01:three_prime_UTR 35.0%
CGTTTACTTATCTGTGAAGT+TGG - Chr3:72479612-72479631 MsG0380015608.01.T01:intron 35.0%
CTACATAGTTTAAGGGATCA+TGG - Chr3:72479685-72479704 MsG0380015608.01.T01:intron 35.0%
CTTGAAAGACTATCAGGAAT+AGG + Chr3:72481299-72481318 None:intergenic 35.0%
GAAAAGGGAAACATAATCAG+GGG + Chr3:72480852-72480871 None:intergenic 35.0%
GAACGATGTTAAATCATGCA+AGG - Chr3:72479335-72479354 MsG0380015608.01.T01:intron 35.0%
GGTTATATAATCCCCCTAAT+GGG + Chr3:72480831-72480850 None:intergenic 35.0%
GTATTCTCACGTAGAATTCA+AGG - Chr3:72479637-72479656 MsG0380015608.01.T01:intron 35.0%
GTCACTCATGAACTTAGAAT+TGG - Chr3:72479918-72479937 MsG0380015608.01.T01:CDS 35.0%
TAAACCATCCATTTCTCCAA+AGG - Chr3:72481390-72481409 MsG0380015608.01.T01:intron 35.0%
TACCAAAACTGCATTAATGC+TGG - Chr3:72481193-72481212 MsG0380015608.01.T01:intron 35.0%
TCAAGTCTCATGGCAATAAA+TGG + Chr3:72479823-72479842 None:intergenic 35.0%
TCTCTTCTAATAACAGATGC+AGG - Chr3:72481241-72481260 MsG0380015608.01.T01:intron 35.0%
TCTGTCAAACTTGCAGATTT+GGG - Chr3:72479161-72479180 MsG0380015608.01.T01:three_prime_UTR 35.0%
TCTTCATCTCCTTACATTCA+TGG - Chr3:72481425-72481444 MsG0380015608.01.T01:intron 35.0%
TGACATTGTCTTTGCTTCAA+AGG + Chr3:72482130-72482149 None:intergenic 35.0%
TGCAACAAGAAAACCAAAAC+TGG + Chr3:72481663-72481682 None:intergenic 35.0%
TTACTTATCTGTGAAGTTGG+TGG - Chr3:72479615-72479634 MsG0380015608.01.T01:intron 35.0%
! AACCAGCATTAATGCAGTTT+TGG + Chr3:72481198-72481217 None:intergenic 35.0%
! AAGAGGAAATCAAAGCATCA+AGG + Chr3:72481523-72481542 None:intergenic 35.0%
! ATTCCACTCACAGTCTTTTT+CGG - Chr3:72480922-72480941 MsG0380015608.01.T01:intron 35.0%
! CAAACAAATGCTTTTGTGGT+AGG - Chr3:72478849-72478868 MsG0380015608.01.T01:three_prime_UTR 35.0%
! CTGCTTTGGATCAATTGATA+TGG - Chr3:72482082-72482101 MsG0380015608.01.T01:intron 35.0%
! GATCATCAGGATTAACTTGA+AGG + Chr3:72481349-72481368 None:intergenic 35.0%
! GTGATTTCACTCTTATTTGG+GGG - Chr3:72481721-72481740 MsG0380015608.01.T01:intron 35.0%
!! ACCACAAAAGCATTTGTTTG+GGG + Chr3:72478849-72478868 None:intergenic 35.0%
!! CTACCACAAAAGCATTTGTT+TGG + Chr3:72478851-72478870 None:intergenic 35.0%
!! GTAGATTTTAAGCACTGCTT+TGG - Chr3:72482068-72482087 MsG0380015608.01.T01:intron 35.0%
!! TATTTTGGGCGAACATTTTC+TGG + Chr3:72480408-72480427 None:intergenic 35.0%
!!! GAAATGTTTTAACCAGTCTC+CGG - Chr3:72481794-72481813 MsG0380015608.01.T01:intron 35.0%
!!! TTATTTTTGCTCCCATTAGG+GGG - Chr3:72480817-72480836 MsG0380015608.01.T01:intron 35.0%
AAGATTGAAGGCAAACCTCA+GGG + Chr3:72479380-72479399 None:intergenic 40.0%
ACAGGTTCCAAATTGGAGTA+CGG + Chr3:72480787-72480806 None:intergenic 40.0%
AGAGGTAGAATACAATGCCA+TGG + Chr3:72480585-72480604 None:intergenic 40.0%
ATCACATCGATCAAGTCTCA+TGG + Chr3:72479833-72479852 None:intergenic 40.0%
ATGTATATGCAGGTTGTGAG+AGG - Chr3:72480682-72480701 MsG0380015608.01.T01:intron 40.0%
CAACTTCAACGCCCAATTAA+TGG + Chr3:72480344-72480363 None:intergenic 40.0%
CCAAATTCCGTACTCCAATT+TGG - Chr3:72480777-72480796 MsG0380015608.01.T01:intron 40.0%
CCAAATTGGAGTACGGAATT+TGG + Chr3:72480780-72480799 None:intergenic 40.0%
CCTGTTGAACTCTGTTACAT+GGG - Chr3:72479714-72479733 MsG0380015608.01.T01:three_prime_UTR 40.0%
CTTAGATGTTGGAACAACAG+TGG - Chr3:72482213-72482232 MsG0380015608.01.T01:intron 40.0%
GAAAGACTATCAGGAATAGG+AGG + Chr3:72481296-72481315 None:intergenic 40.0%
GAATGTAAGGAGATGAAGAC+TGG + Chr3:72481424-72481443 None:intergenic 40.0%
GACACATACAGGTTCCAAAT+TGG + Chr3:72480794-72480813 None:intergenic 40.0%
GAGGAAAGAACAAAGGTTAC+GGG - Chr3:72480701-72480720 MsG0380015608.01.T01:intron 40.0%
GCATCTCTTGAAAGACTATC+AGG + Chr3:72481305-72481324 None:intergenic 40.0%
GGGTTATATAATCCCCCTAA+TGG + Chr3:72480832-72480851 None:intergenic 40.0%
GTCTGTCAAACTTGCAGATT+TGG - Chr3:72479160-72479179 MsG0380015608.01.T01:three_prime_UTR 40.0%
GTTGTGAGAGGAAAGAACAA+AGG - Chr3:72480694-72480713 MsG0380015608.01.T01:intron 40.0%
TAAAATTGCTGGAGTTGACC+CGG - Chr3:72481975-72481994 MsG0380015608.01.T01:intron 40.0%
TAAGATTGAAGGCAAACCTC+AGG + Chr3:72479381-72479400 None:intergenic 40.0%
TCCTGTTGAACTCTGTTACA+TGG - Chr3:72479713-72479732 MsG0380015608.01.T01:three_prime_UTR 40.0%
TCCTTACATTCATGGCAGAA+GGG - Chr3:72481433-72481452 MsG0380015608.01.T01:intron 40.0%
TTGAGTCTAGGTGCAATTAG+AGG - Chr3:72480029-72480048 MsG0380015608.01.T01:intron 40.0%
! AGTTGGCTCATTTGACTAGA+AGG + Chr3:72482174-72482193 None:intergenic 40.0%
! GTTTCCCTTTTCTGTCTCAA+GGG - Chr3:72480860-72480879 MsG0380015608.01.T01:intron 40.0%
! TGTTTCCCTTTTCTGTCTCA+AGG - Chr3:72480859-72480878 MsG0380015608.01.T01:intron 40.0%
!! GGCGAACATTTTCTGGAAAA+CGG + Chr3:72480401-72480420 None:intergenic 40.0%
!! TTGCAGATTTGGGTTAGCAA+AGG - Chr3:72479171-72479190 MsG0380015608.01.T01:intron 40.0%
AAAATTGCTGGAGTTGACCC+GGG - Chr3:72481976-72481995 MsG0380015608.01.T01:intron 45.0%
AGACTATCAGGAATAGGAGG+TGG + Chr3:72481293-72481312 None:intergenic 45.0%
AGATTGAAGGCAAACCTCAG+GGG + Chr3:72479379-72479398 None:intergenic 45.0%
ATGTTGGAACAACAGTGGCA+AGG - Chr3:72482218-72482237 MsG0380015608.01.T01:intron 45.0%
ATTAAGGGCTAACATGGGAG+CGG - Chr3:72480000-72480019 MsG0380015608.01.T01:intron 45.0%
ATTGCTGCAAAAATGGACCC+CGG + Chr3:72481997-72482016 None:intergenic 45.0%
CCCATGTAACAGAGTTCAAC+AGG + Chr3:72479717-72479736 None:intergenic 45.0%
CCTTACATTCATGGCAGAAG+GGG - Chr3:72481434-72481453 MsG0380015608.01.T01:intron 45.0%
CTCCTTACATTCATGGCAGA+AGG - Chr3:72481432-72481451 MsG0380015608.01.T01:intron 45.0%
CTCTCCCTTGAGACAGAAAA+GGG + Chr3:72480867-72480886 None:intergenic 45.0%
GAAATGCATGTTCCAGCTTG+CGG + Chr3:72480259-72480278 None:intergenic 45.0%
GAACCGAAAAAGACTGTGAG+TGG + Chr3:72480928-72480947 None:intergenic 45.0%
GCATCCCAGACTCCAAATAT+CGG + Chr3:72480734-72480753 None:intergenic 45.0%
GGAATGGCAATGGCAATCAT+TGG + Chr3:72478819-72478838 None:intergenic 45.0%
GGTAGAATACAATGCCATGG+TGG + Chr3:72480582-72480601 None:intergenic 45.0%
TGGCTCATTTGACTAGAAGG+CGG + Chr3:72482171-72482190 None:intergenic 45.0%
TTCAAAATTCCACCGGAGAC+TGG + Chr3:72481809-72481828 None:intergenic 45.0%
! GAAAGTGGCCTTTGGAGAAA+TGG + Chr3:72481401-72481420 None:intergenic 45.0%
! GCATTTGTTTGGGGCAAGAA+AGG + Chr3:72478840-72478859 None:intergenic 45.0%
! GCCCCAAACAAATGCTTTTG+TGG - Chr3:72478845-72478864 MsG0380015608.01.T01:three_prime_UTR 45.0%
! TGTTTGGGGCAAGAAAGGAA+TGG + Chr3:72478835-72478854 None:intergenic 45.0%
!! ACTGTTCTGGAGATGCTAAC+GGG - Chr3:72480754-72480773 MsG0380015608.01.T01:intron 45.0%
!! CACTGTTCTGGAGATGCTAA+CGG - Chr3:72480753-72480772 MsG0380015608.01.T01:intron 45.0%
!!! ATGTTTTAACCAGTCTCCGG+TGG - Chr3:72481797-72481816 MsG0380015608.01.T01:intron 45.0%
!! AAAATTTCTATATTTAAATT+GGG - Chr3:72481686-72481705 MsG0380015608.01.T01:intron 5.0%
!! TAAAATTTCTATATTTAAAT+TGG - Chr3:72481685-72481704 MsG0380015608.01.T01:intron 5.0%
AAATTGCTGGAGTTGACCCG+GGG - Chr3:72481977-72481996 MsG0380015608.01.T01:intron 50.0%
AAGACTGGGAAAGTGGCCTT+TGG + Chr3:72481409-72481428 None:intergenic 50.0%
CAAGCTAGAGTTCTGCATCC+AGG + Chr3:72479539-72479558 None:intergenic 50.0%
CAAGGGAACAGCATTCTGGA+TGG - Chr3:72479353-72479372 MsG0380015608.01.T01:intron 50.0%
CATGCAAGGGAACAGCATTC+TGG - Chr3:72479349-72479368 MsG0380015608.01.T01:intron 50.0%
CCCCTTCTGCCATGAATGTA+AGG + Chr3:72481437-72481456 None:intergenic 50.0%
CTCATTTGACTAGAAGGCGG+GGG + Chr3:72482168-72482187 None:intergenic 50.0%
GAGCGGACATAGTTGAGTCT+AGG - Chr3:72480017-72480036 MsG0380015608.01.T01:intron 50.0%
GCAGCAGTAGAACGATCATC+AGG + Chr3:72481362-72481381 None:intergenic 50.0%
GCTCATTTGACTAGAAGGCG+GGG + Chr3:72482169-72482188 None:intergenic 50.0%
GCTCTCCCTTGAGACAGAAA+AGG + Chr3:72480868-72480887 None:intergenic 50.0%
GGAGATGAAGACTGGGAAAG+TGG + Chr3:72481416-72481435 None:intergenic 50.0%
GGCTCATTTGACTAGAAGGC+GGG + Chr3:72482170-72482189 None:intergenic 50.0%
GGGCAAGAAAGGAATGGCAA+TGG + Chr3:72478829-72478848 None:intergenic 50.0%
TCACGCATGCATTGCACCAA+TGG + Chr3:72480209-72480228 None:intergenic 50.0%
TTGCTGCAAAAATGGACCCC+GGG + Chr3:72481996-72482015 None:intergenic 50.0%
! CCAGCCGATATTTGGAGTCT+GGG - Chr3:72480727-72480746 MsG0380015608.01.T01:intron 50.0%
! GTGGCCTTTGGAGAAATGGA+TGG + Chr3:72481397-72481416 None:intergenic 50.0%
! TCCAGCCGATATTTGGAGTC+TGG - Chr3:72480726-72480745 MsG0380015608.01.T01:intron 50.0%
! TCTCACACTTTTCCGCAAGC+TGG - Chr3:72480244-72480263 MsG0380015608.01.T01:intron 50.0%
ACGGGCTTCCAGCCGATATT+TGG - Chr3:72480719-72480738 MsG0380015608.01.T01:intron 55.0%
CCCAGACTCCAAATATCGGC+TGG + Chr3:72480730-72480749 None:intergenic 55.0%
! GAGTCTGGGATGCACTGTTC+TGG - Chr3:72480741-72480760 MsG0380015608.01.T01:intron 55.0%
AGCATTCTGGATGGCCCCTG+AGG - Chr3:72479362-72479381 MsG0380015608.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 72478804 72482397 72478804 ID=MsG0380015608.01;Name=MsG0380015608.01
Chr3 mRNA 72478804 72482397 72478804 ID=MsG0380015608.01.T01;Parent=MsG0380015608.01;Name=MsG0380015608.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0.8|0.83|0.83|0.6|0.5|6|419|169
Chr3 exon 72478804 72479188 72478804 ID=MsG0380015608.01.T01:exon:24094;Parent=MsG0380015608.01.T01
Chr3 exon 72479707 72479944 72479707 ID=MsG0380015608.01.T01:exon:24093;Parent=MsG0380015608.01.T01
Chr3 exon 72480397 72480507 72480397 ID=MsG0380015608.01.T01:exon:24092;Parent=MsG0380015608.01.T01
Chr3 exon 72481818 72481877 72481818 ID=MsG0380015608.01.T01:exon:24091;Parent=MsG0380015608.01.T01
Chr3 exon 72482009 72482080 72482009 ID=MsG0380015608.01.T01:exon:24090;Parent=MsG0380015608.01.T01
Chr3 exon 72482335 72482397 72482335 ID=MsG0380015608.01.T01:exon:24089;Parent=MsG0380015608.01.T01
Chr3 CDS 72482335 72482397 72482335 ID=MsG0380015608.01.T01:cds;Parent=MsG0380015608.01.T01
Chr3 CDS 72482009 72482080 72482009 ID=MsG0380015608.01.T01:cds;Parent=MsG0380015608.01.T01
Chr3 CDS 72481818 72481877 72481818 ID=MsG0380015608.01.T01:cds;Parent=MsG0380015608.01.T01
Chr3 CDS 72480397 72480507 72480397 ID=MsG0380015608.01.T01:cds;Parent=MsG0380015608.01.T01
Chr3 CDS 72479741 72479944 72479741 ID=MsG0380015608.01.T01:cds;Parent=MsG0380015608.01.T01
Chr3 three_prime_UTR 72479707 72479740 72479707 ID=MsG0380015608.01.T01:three_prime_utr;Parent=MsG0380015608.01.T01
Chr3 three_prime_UTR 72478804 72479188 72478804 ID=MsG0380015608.01.T01:three_prime_utr;Parent=MsG0380015608.01.T01
Gene Sequence

>MsG0380015608.01.T01

ATGATTTTTCATCCAATGATTGCCATTGCCATTCCTTTCTTGCCCCAAACAAATGCTTTTGTGGGATATCAAATGTGCAAATATATTGGTGCATGCAAGTGGGTCTGTCAAACTTGCAGATTTGGGTTAGCAAAGGCAACCAAATTGAACGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCTGAGGTTGTGAGAGGAAAGAACAAAGGTTACGGGCTTCCAGCCGATATTTGGAGTCTGGGATGCACTGTTCTGGAGATGCTAACGGGCCAAATTCCGTACTCCAATTTGGAACCTATGCAGGCATTATTTAGAATAGGAAAAGGTGAGCCACCTCCTATTCCTGATAGTCTTTCAAGAGATGCAAAAGATTTTATCATGCAGTGCCTTCAAGTTAATCCTGATGATCGTTCTACTGCTGCTCAACTCTTAAACCATCCATTTCTCCAAAGGCCACTTTCCCAGTCTTCATCTCCTTACATTCATGGCAGAAGGGGTTAA
Protein sequence

>MsG0380015608.01.T01

MIFHPMIAIAIPFLPQTNAFVGYQMCKYIGACKWVCQTCRFGLAKATKLNDVKSCKGTAFWMAPEVVRGKNKGYGLPADIWSLGCTVLEMLTGQIPYSNLEPMQALFRIGKGEPPPIPDSLSRDAKDFIMQCLQVNPDDRSTAAQLLNHPFLQRPLSQSSSPYIHGRRG*