AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015850.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015850.01.T01 MTR_3g078613 97.512 201 5 0 1 201 1 201 3.34e-141 392
MsG0380015850.01.T01 MTR_3g078613 97.015 201 5 1 1 201 1 200 1.73e-138 385
MsG0380015850.01.T01 MTR_4g106590 68.981 216 51 5 1 201 1 215 3.77e-90 263
MsG0380015850.01.T01 MTR_1g049100 61.688 154 53 3 22 173 7 156 1.80e-58 182
MsG0380015850.01.T01 MTR_5g036480 65.035 143 45 2 17 155 10 151 1.72e-57 181
MsG0380015850.01.T01 MTR_7g490310 52.761 163 67 3 18 171 4 165 1.29e-52 169
MsG0380015850.01.T01 MTR_3g093860 58.647 133 50 2 24 153 19 149 1.42e-49 158
MsG0380015850.01.T01 MTR_8g038620 54.667 150 57 3 18 158 4 151 1.13e-48 157
MsG0380015850.01.T01 MTR_3g088630 50.667 150 54 2 22 153 21 168 3.62e-46 152
MsG0380015850.01.T01 MTR_3g015490 49.390 164 70 4 20 174 1 160 6.99e-44 144
MsG0380015850.01.T01 MTR_6g007460 39.286 196 67 2 15 158 3 198 2.55e-37 129
MsG0380015850.01.T01 MTR_4g051330 46.053 76 41 0 99 174 74 149 3.73e-17 75.1
MsG0380015850.01.T01 MTR_3g092780 28.859 149 96 3 23 171 56 194 1.55e-13 68.9
MsG0380015850.01.T01 MTR_3g092780 28.859 149 96 3 23 171 56 194 1.81e-13 68.6
MsG0380015850.01.T01 MTR_3g092780 30.534 131 81 3 23 153 56 176 1.07e-12 66.2
MsG0380015850.01.T01 MTR_3g092780 30.534 131 81 3 23 153 56 176 1.25e-12 66.2
MsG0380015850.01.T01 MTR_4g061360 30.597 134 83 2 20 153 86 209 7.35e-12 63.9
MsG0380015850.01.T01 MTR_8g024260 28.682 129 82 2 25 153 38 156 9.13e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015850.01.T01 AT3G48100 63.736 182 59 3 5 180 2 182 1.98e-75 225
MsG0380015850.01.T01 AT1G74890 75.333 150 30 3 22 167 17 163 1.11e-71 216
MsG0380015850.01.T01 AT5G62920 74.483 145 35 2 23 167 25 167 1.57e-70 213
MsG0380015850.01.T01 AT1G19050 67.089 158 49 2 3 158 2 158 3.47e-69 210
MsG0380015850.01.T01 AT1G59940 62.857 175 45 5 1 158 1 172 1.94e-66 204
MsG0380015850.01.T01 AT1G59940 62.857 175 45 5 1 158 93 264 3.86e-65 204
MsG0380015850.01.T01 AT1G10470 66.443 149 49 1 14 162 11 158 2.13e-63 196
MsG0380015850.01.T01 AT1G10470 72.727 132 35 1 22 153 33 163 3.63e-63 196
MsG0380015850.01.T01 AT2G41310 56.667 150 56 3 21 162 7 155 3.92e-53 170
MsG0380015850.01.T01 AT3G57040 57.534 146 51 2 18 153 4 148 4.16e-53 170
MsG0380015850.01.T01 AT3G57040 57.534 146 51 2 18 153 4 148 4.16e-53 170
MsG0380015850.01.T01 AT2G40670 59.559 136 50 2 22 153 28 162 5.06e-53 167
MsG0380015850.01.T01 AT3G56380 58.647 133 54 1 22 153 19 151 1.09e-52 166
MsG0380015850.01.T01 AT2G40670 58.824 136 50 3 22 153 28 161 3.00e-50 160
MsG0380015850.01.T01 AT3G56380 57.895 133 54 2 22 153 19 150 6.07e-50 159
MsG0380015850.01.T01 AT1G10470 61.111 72 28 0 91 162 25 96 8.05e-23 90.9
MsG0380015850.01.T01 AT2G07440 52.941 68 32 0 95 162 2 69 1.16e-16 73.6
MsG0380015850.01.T01 AT5G07210 30.508 177 97 6 1 175 1 153 6.84e-15 72.8
MsG0380015850.01.T01 AT5G24470 29.771 131 82 3 23 153 50 170 2.61e-12 65.5
MsG0380015850.01.T01 AT1G67710 30.137 146 89 3 14 159 2 134 1.08e-11 63.5
MsG0380015850.01.T01 AT2G46790 27.481 131 85 2 23 153 37 157 1.83e-11 62.8
MsG0380015850.01.T01 AT2G46790 27.481 131 85 2 23 153 37 157 2.14e-11 62.4
MsG0380015850.01.T01 AT5G60100 31.343 134 82 3 20 153 61 184 6.76e-11 60.8
MsG0380015850.01.T01 AT5G60100 31.343 134 82 3 20 153 61 184 6.76e-11 60.8
MsG0380015850.01.T01 AT5G60100 31.343 134 82 3 20 153 61 184 6.76e-11 60.8
MsG0380015850.01.T01 AT5G60100 31.343 134 82 3 20 153 61 184 7.32e-11 60.8

Find 41 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGATCTTACCTATCAATT+CGG 0.347926 3:-75840369 None:intergenic
TGAATTGCTCAAGAAGATTA+AGG 0.356380 3:+75840129 MsG0380015850.01.T01:CDS
ACTAGAGCTTTACAGTATCT+TGG 0.363036 3:+75839899 MsG0380015850.01.T01:CDS
AGCTTTACAGTATCTTGGTT+TGG 0.366392 3:+75839904 MsG0380015850.01.T01:CDS
CTACTGCTGGTGATGTTCTC+AGG 0.387823 3:+75839631 MsG0380015850.01.T01:CDS
TGTTCTCAGGCAGAGTTTAC+CGG 0.414947 3:+75839644 MsG0380015850.01.T01:CDS
TTCACATCTGCCAACTTGAC+AGG 0.430476 3:-75841529 None:intergenic
ATGAATCAATGGTTATAGTC+TGG 0.434730 3:-75841713 None:intergenic
ACATCTTGACCCGAATTGAT+AGG 0.448548 3:+75840359 MsG0380015850.01.T01:CDS
ATGACAGATTATTCTATGCC+TGG 0.452458 3:+75840094 MsG0380015850.01.T01:CDS
TATTCTATGCCTGGGATGAC+AGG 0.453139 3:+75840103 MsG0380015850.01.T01:CDS
CTTAAATTCACTTCTTGCAA+AGG 0.463478 3:+75839750 MsG0380015850.01.T01:CDS
ATTGACAGTTGCTTGGAAGA+AGG 0.475916 3:+75841484 MsG0380015850.01.T01:intron
ACACCAGCACCACTTACTTC+CGG 0.479536 3:-75839663 None:intergenic
TTACAGTATCTTGGTTTGGA+TGG 0.481557 3:+75839908 MsG0380015850.01.T01:CDS
GATGGTGACACGAGTTCCAT+TGG 0.497003 3:+75839926 MsG0380015850.01.T01:CDS
AAGATCTTACCTATCAATTC+GGG 0.507592 3:-75840368 None:intergenic
TTTGTTCATTGACAGTTGCT+TGG 0.513588 3:+75841477 MsG0380015850.01.T01:intron
AGAGGTGAAGGAAAGAAAGT+CGG 0.518178 3:+75841574 MsG0380015850.01.T01:CDS
TTTGCTTACATCAAAACCAA+TGG 0.528283 3:-75839942 None:intergenic
TTACCGGAAGTAAGTGGTGC+TGG 0.532656 3:+75839660 MsG0380015850.01.T01:CDS
GAAGTAAGTGGTGCTGGTGT+TGG 0.533059 3:+75839666 MsG0380015850.01.T01:CDS
TTGATCGCAAAGTCATTGAA+AGG 0.535022 3:+75839724 MsG0380015850.01.T01:CDS
GCAGTTACTGTTGTTGAGAG+TGG 0.535906 3:+75839875 MsG0380015850.01.T01:intron
AATTCATATCCTGTCATCCC+AGG 0.536075 3:-75840112 None:intergenic
TTGTATTTCATCTCTATCAA+CGG 0.543618 3:+75841633 MsG0380015850.01.T01:CDS
TGACAGATTATTCTATGCCT+GGG 0.547632 3:+75840095 MsG0380015850.01.T01:CDS
TCAGAGGACATAACCACCAC+TGG 0.556667 3:-75840334 None:intergenic
TCTATTGAAACCTGTCAAGT+TGG 0.561378 3:+75841519 MsG0380015850.01.T01:CDS
TTCTTTGACGACATTGCAGA+CGG 0.571495 3:-75841688 None:intergenic
GGTGAAGGAAAGAAAGTCGG+AGG 0.571633 3:+75841577 MsG0380015850.01.T01:CDS
AGAGTTGCACGTTCTTGCAG+TGG 0.580799 3:+75839689 MsG0380015850.01.T01:CDS
ATTTAGAGAAATTCCAGTGG+TGG 0.593101 3:+75840321 MsG0380015850.01.T01:CDS
GATTTCATAATGAGAGGTGA+AGG 0.593144 3:+75841562 MsG0380015850.01.T01:CDS
TTAACAGATTTCATAATGAG+AGG 0.593540 3:+75841556 MsG0380015850.01.T01:CDS
GACATTGCAGACGGTGACAA+TGG 0.595350 3:-75841679 None:intergenic
CAGAGTTTACCGGAAGTAAG+TGG 0.596307 3:+75839654 MsG0380015850.01.T01:CDS
TTGCTTGGAAGAAGGAGCAG+AGG 0.596704 3:+75841492 MsG0380015850.01.T01:CDS
AATATGGTTACAGGGTGTGA+AGG 0.609461 3:+75840060 MsG0380015850.01.T01:intron
TGTATTTAGAGAAATTCCAG+TGG 0.707997 3:+75840318 MsG0380015850.01.T01:CDS
TCGGGTCAAGATGTTCTCAG+AGG 0.723155 3:-75840350 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAAAGAATTGCAT+AGG - Chr3:75840516-75840535 None:intergenic 15.0%
!! AAACACATAAAAAATTCAAA+AGG - Chr3:75839801-75839820 None:intergenic 15.0%
!! AACACATAAAAAATTCAAAA+GGG - Chr3:75839800-75839819 None:intergenic 15.0%
!!! ATTAAAGACATGTATATTTT+TGG + Chr3:75840552-75840571 MsG0380015850.01.T01:intron 15.0%
!!! GTGTTTTTTTTTTTTTTTTG+AGG + Chr3:75839994-75840013 MsG0380015850.01.T01:intron 15.0%
!! AAACAATACTAATTCAAAAG+AGG - Chr3:75840408-75840427 None:intergenic 20.0%
!! AAAGATCTCAATATCTAATT+AGG + Chr3:75840790-75840809 MsG0380015850.01.T01:intron 20.0%
!! AAATATCTCAAAAAAGAAGT+CGG + Chr3:75841602-75841621 MsG0380015850.01.T01:CDS 20.0%
!! AATCTAATCTAATCTAATCT+AGG - Chr3:75840227-75840246 None:intergenic 20.0%
!! ATAATTTCAGGAATAAAAGT+AGG - Chr3:75841295-75841314 None:intergenic 20.0%
!! ATGATCAATAAATATGAAAC+AGG - Chr3:75841452-75841471 None:intergenic 20.0%
!! GTCTTTAATACAAAAACTAA+AGG - Chr3:75840541-75840560 None:intergenic 20.0%
!!! GATTAGTTATAGTTACATAT+TGG + Chr3:75840472-75840491 MsG0380015850.01.T01:intron 20.0%
!!! TTTATGTGTTTTTGTTCATT+TGG + Chr3:75839810-75839829 MsG0380015850.01.T01:intron 20.0%
! AATCCTTTCACTAAAATGAT+AGG + Chr3:75841018-75841037 MsG0380015850.01.T01:intron 25.0%
! AATCTCAGCTAAAAAACAAT+AGG - Chr3:75840439-75840458 None:intergenic 25.0%
! ATCCATTTGTGAAATATGTA+TGG + Chr3:75840599-75840618 MsG0380015850.01.T01:intron 25.0%
! CTCAATATCTAATTAGGTTT+AGG + Chr3:75840796-75840815 MsG0380015850.01.T01:intron 25.0%
! GTGAAATATGTATGGTATAT+GGG + Chr3:75840607-75840626 MsG0380015850.01.T01:intron 25.0%
! TAACATGGTGATATTATTGA+GGG - Chr3:75841089-75841108 None:intergenic 25.0%
! TACCATACATATTTCACAAA+TGG - Chr3:75840604-75840623 None:intergenic 25.0%
! TAGAATAAGAAAAAACGTGT+GGG - Chr3:75840642-75840661 None:intergenic 25.0%
! TATAATTGCCACACAATTAT+AGG + Chr3:75841246-75841265 MsG0380015850.01.T01:intron 25.0%
! TGATAAAACCTATAATTGTG+TGG - Chr3:75841257-75841276 None:intergenic 25.0%
! TGTGAAATATGTATGGTATA+TGG + Chr3:75840606-75840625 MsG0380015850.01.T01:intron 25.0%
! TTAACAGATTTCATAATGAG+AGG + Chr3:75841556-75841575 MsG0380015850.01.T01:CDS 25.0%
! TTGCAAAATCTTTCTACTAA+TGG + Chr3:75841052-75841071 MsG0380015850.01.T01:intron 25.0%
! TTGTATTTCATCTCTATCAA+CGG + Chr3:75841633-75841652 MsG0380015850.01.T01:CDS 25.0%
!! GATTGGATTCTAATGTTTTT+CGG + Chr3:75839832-75839851 MsG0380015850.01.T01:intron 25.0%
!! GGTATTTTCAGTTTTTTGTT+TGG + Chr3:75840015-75840034 MsG0380015850.01.T01:intron 25.0%
!! GTAAGCAAAGTTTCTAATTT+TGG + Chr3:75839956-75839975 MsG0380015850.01.T01:intron 25.0%
!! TTTTGATGAATATGGTTACA+GGG + Chr3:75840052-75840071 MsG0380015850.01.T01:intron 25.0%
!!! TAACCTATCATTTTAGTGAA+AGG - Chr3:75841024-75841043 None:intergenic 25.0%
!!! TCATTTTAGTGAAAGGATTT+TGG - Chr3:75841017-75841036 None:intergenic 25.0%
!!! TGTTGTTGTTTTGATGAATA+TGG + Chr3:75840044-75840063 MsG0380015850.01.T01:intron 25.0%
!!! TTATTTCTGTTAATTTCAGC+AGG + Chr3:75840288-75840307 MsG0380015850.01.T01:intron 25.0%
AAGATCTTACCTATCAATTC+GGG - Chr3:75840371-75840390 None:intergenic 30.0%
AAGTAAGAAACTTCCATTCA+TGG - Chr3:75841424-75841443 None:intergenic 30.0%
ACAAAAATACAACATAGCCT+TGG - Chr3:75840938-75840957 None:intergenic 30.0%
ATATCTAATTAGGTTTAGGC+TGG + Chr3:75840800-75840819 MsG0380015850.01.T01:intron 30.0%
ATATTACCAATTTACCACCA+AGG + Chr3:75840918-75840937 MsG0380015850.01.T01:intron 30.0%
CAAGATCTTACCTATCAATT+CGG - Chr3:75840372-75840391 None:intergenic 30.0%
CATATTGCCAATCATTAAGA+AGG - Chr3:75840864-75840883 None:intergenic 30.0%
CATTAAGCCTTCTTAATGAT+TGG + Chr3:75840854-75840873 MsG0380015850.01.T01:intron 30.0%
CTAACATGGTGATATTATTG+AGG - Chr3:75841090-75841109 None:intergenic 30.0%
CTAGAATAAGAAAAAACGTG+TGG - Chr3:75840643-75840662 None:intergenic 30.0%
CTTAAATTCACTTCTTGCAA+AGG + Chr3:75839750-75839769 MsG0380015850.01.T01:CDS 30.0%
GAAGGTTCAACATAACAAAA+TGG - Chr3:75841327-75841346 None:intergenic 30.0%
GAGAAAAGGGATTTATTGTT+TGG - Chr3:75840982-75841001 None:intergenic 30.0%
TGAATTGCTCAAGAAGATTA+AGG + Chr3:75840129-75840148 MsG0380015850.01.T01:CDS 30.0%
TGGTGTTTGTCAATAATTTC+AGG - Chr3:75841307-75841326 None:intergenic 30.0%
TGTATTTAGAGAAATTCCAG+TGG + Chr3:75840318-75840337 MsG0380015850.01.T01:CDS 30.0%
TTTGCTTACATCAAAACCAA+TGG - Chr3:75839945-75839964 None:intergenic 30.0%
! AAATGGATTTCATGTCTAGA+TGG - Chr3:75840587-75840606 None:intergenic 30.0%
! AATGGATTTCATGTCTAGAT+GGG - Chr3:75840586-75840605 None:intergenic 30.0%
! ATGAAATCCATTTTCCTACA+AGG + Chr3:75841190-75841209 MsG0380015850.01.T01:intron 30.0%
! CAAATTTGATGATCCATGAA+TGG + Chr3:75841408-75841427 MsG0380015850.01.T01:intron 30.0%
! GATGTATGTATTGATGAAAG+AGG + Chr3:75840195-75840214 MsG0380015850.01.T01:intron 30.0%
!! GTGTTTTTGTTCATTTGGAT+TGG + Chr3:75839815-75839834 MsG0380015850.01.T01:intron 30.0%
!! GTTTTGATGAATATGGTTAC+AGG + Chr3:75840051-75840070 MsG0380015850.01.T01:intron 30.0%
!!! CACACGTTTTTTCTTATTCT+AGG + Chr3:75840641-75840660 MsG0380015850.01.T01:intron 30.0%
!!! CGTTTTTTCTTATTCTAGGT+TGG + Chr3:75840645-75840664 MsG0380015850.01.T01:intron 30.0%
AAATCCAAAAATAGCCATGG+TGG + Chr3:75840715-75840734 MsG0380015850.01.T01:intron 35.0%
AATCCAAAAATAGCCATGGT+GGG + Chr3:75840716-75840735 MsG0380015850.01.T01:intron 35.0%
ACCAAATCCAAAAATAGCCA+TGG + Chr3:75840712-75840731 MsG0380015850.01.T01:intron 35.0%
ACTAGAGCTTTACAGTATCT+TGG + Chr3:75839899-75839918 MsG0380015850.01.T01:CDS 35.0%
AGCTTTACAGTATCTTGGTT+TGG + Chr3:75839904-75839923 MsG0380015850.01.T01:CDS 35.0%
ATGACAGATTATTCTATGCC+TGG + Chr3:75840094-75840113 MsG0380015850.01.T01:CDS 35.0%
ATTTAGAGAAATTCCAGTGG+TGG + Chr3:75840321-75840340 MsG0380015850.01.T01:CDS 35.0%
CATGGATCATCAAATTTGCA+AGG - Chr3:75841406-75841425 None:intergenic 35.0%
GATTTCATAATGAGAGGTGA+AGG + Chr3:75841562-75841581 MsG0380015850.01.T01:CDS 35.0%
TCTATTGAAACCTGTCAAGT+TGG + Chr3:75841519-75841538 MsG0380015850.01.T01:CDS 35.0%
TGACAGATTATTCTATGCCT+GGG + Chr3:75840095-75840114 MsG0380015850.01.T01:CDS 35.0%
TTGATCGCAAAGTCATTGAA+AGG + Chr3:75839724-75839743 MsG0380015850.01.T01:CDS 35.0%
TTTGTTCATTGACAGTTGCT+TGG + Chr3:75841477-75841496 MsG0380015850.01.T01:intron 35.0%
! AAAATACAACATAGCCTTGG+TGG - Chr3:75840935-75840954 None:intergenic 35.0%
!! TTACAGTATCTTGGTTTGGA+TGG + Chr3:75839908-75839927 MsG0380015850.01.T01:CDS 35.0%
!!! ACCATGGCTATTTTTGGATT+TGG - Chr3:75840716-75840735 None:intergenic 35.0%
!!! ATGGCTATTTTTGGATTTGG+TGG - Chr3:75840713-75840732 None:intergenic 35.0%
AATAATGTTGTCATGCCAGC+AGG - Chr3:75841218-75841237 None:intergenic 40.0%
AATATGGTTACAGGGTGTGA+AGG + Chr3:75840060-75840079 MsG0380015850.01.T01:intron 40.0%
AATTCATATCCTGTCATCCC+AGG - Chr3:75840115-75840134 None:intergenic 40.0%
ACATCTTGACCCGAATTGAT+AGG + Chr3:75840359-75840378 MsG0380015850.01.T01:CDS 40.0%
AGAGGTGAAGGAAAGAAAGT+CGG + Chr3:75841574-75841593 MsG0380015850.01.T01:CDS 40.0%
ATAATGTTGTCATGCCAGCA+GGG - Chr3:75841217-75841236 None:intergenic 40.0%
ATGATTATGATCACCCACCA+TGG - Chr3:75840732-75840751 None:intergenic 40.0%
ATTCCCTTATAAGGCTGAGA+AGG - Chr3:75841345-75841364 None:intergenic 40.0%
ATTGACAGTTGCTTGGAAGA+AGG + Chr3:75841484-75841503 MsG0380015850.01.T01:intron 40.0%
CCATGTGTCTAACTCTAACA+TGG - Chr3:75841104-75841123 None:intergenic 40.0%
CCATGTTAGAGTTAGACACA+TGG + Chr3:75841101-75841120 MsG0380015850.01.T01:intron 40.0%
CTCATGCACATTCCCTTATA+AGG - Chr3:75841354-75841373 None:intergenic 40.0%
TTCTTTGACGACATTGCAGA+CGG - Chr3:75841691-75841710 None:intergenic 40.0%
! ACATAGCCTTGGTGGTAAAT+TGG - Chr3:75840927-75840946 None:intergenic 40.0%
! GAACCTTCTCAGCCTTATAA+GGG + Chr3:75841339-75841358 MsG0380015850.01.T01:intron 40.0%
! TGAACCTTCTCAGCCTTATA+AGG + Chr3:75841338-75841357 MsG0380015850.01.T01:intron 40.0%
!! AAAGGATTTTGGCCATGTGT+TGG - Chr3:75841006-75841025 None:intergenic 40.0%
AGAGTTAGACACATGGAGTG+TGG + Chr3:75841108-75841127 MsG0380015850.01.T01:intron 45.0%
CAGAGTTTACCGGAAGTAAG+TGG + Chr3:75839654-75839673 MsG0380015850.01.T01:CDS 45.0%
GCAGTTACTGTTGTTGAGAG+TGG + Chr3:75839875-75839894 MsG0380015850.01.T01:intron 45.0%
TATTCTATGCCTGGGATGAC+AGG + Chr3:75840103-75840122 MsG0380015850.01.T01:CDS 45.0%
TGTTCTCAGGCAGAGTTTAC+CGG + Chr3:75839644-75839663 MsG0380015850.01.T01:CDS 45.0%
TTCACATCTGCCAACTTGAC+AGG - Chr3:75841532-75841551 None:intergenic 45.0%
! GCCATGTGTTGGTGAGAAAA+GGG - Chr3:75840995-75841014 None:intergenic 45.0%
! TCCCTTTTCTCACCAACACA+TGG + Chr3:75840991-75841010 MsG0380015850.01.T01:intron 45.0%
!! TCACCCACCATGGCTATTTT+TGG - Chr3:75840722-75840741 None:intergenic 45.0%
ACACCAGCACCACTTACTTC+CGG - Chr3:75839666-75839685 None:intergenic 50.0%
AGAGTTGCACGTTCTTGCAG+TGG + Chr3:75839689-75839708 MsG0380015850.01.T01:CDS 50.0%
GACATTGCAGACGGTGACAA+TGG - Chr3:75841682-75841701 None:intergenic 50.0%
GATGGTGACACGAGTTCCAT+TGG + Chr3:75839926-75839945 MsG0380015850.01.T01:CDS 50.0%
GCAGGGTCCTTGTAGGAAAA+TGG - Chr3:75841200-75841219 None:intergenic 50.0%
GGTGAAGGAAAGAAAGTCGG+AGG + Chr3:75841577-75841596 MsG0380015850.01.T01:CDS 50.0%
TCAGAGGACATAACCACCAC+TGG - Chr3:75840337-75840356 None:intergenic 50.0%
TCGGGTCAAGATGTTCTCAG+AGG - Chr3:75840353-75840372 None:intergenic 50.0%
TTACCGGAAGTAAGTGGTGC+TGG + Chr3:75839660-75839679 MsG0380015850.01.T01:CDS 50.0%
TTGCTTGGAAGAAGGAGCAG+AGG + Chr3:75841492-75841511 MsG0380015850.01.T01:CDS 50.0%
! CTACTGCTGGTGATGTTCTC+AGG + Chr3:75839631-75839650 MsG0380015850.01.T01:CDS 50.0%
! GGCCATGTGTTGGTGAGAAA+AGG - Chr3:75840996-75841015 None:intergenic 50.0%
! GTTTAGGCTGGCACTGAATG+TGG + Chr3:75840812-75840831 MsG0380015850.01.T01:intron 50.0%
! TTTTCCTACAAGGACCCTGC+TGG + Chr3:75841200-75841219 MsG0380015850.01.T01:intron 50.0%
!! GAAGTAAGTGGTGCTGGTGT+TGG + Chr3:75839666-75839685 MsG0380015850.01.T01:CDS 50.0%
CATGCCAGCAGGGTCCTTGT+AGG - Chr3:75841207-75841226 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 75839627 75841723 75839627 ID=MsG0380015850.01;Name=MsG0380015850.01
Chr3 mRNA 75839627 75841723 75839627 ID=MsG0380015850.01.T01;Parent=MsG0380015850.01;Name=MsG0380015850.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|201
Chr3 exon 75839627 75839771 75839627 ID=MsG0380015850.01.T01:exon:24783;Parent=MsG0380015850.01.T01
Chr3 exon 75839879 75839955 75839879 ID=MsG0380015850.01.T01:exon:24784;Parent=MsG0380015850.01.T01
Chr3 exon 75840073 75840150 75840073 ID=MsG0380015850.01.T01:exon:24785;Parent=MsG0380015850.01.T01
Chr3 exon 75840307 75840380 75840307 ID=MsG0380015850.01.T01:exon:24786;Parent=MsG0380015850.01.T01
Chr3 exon 75841492 75841723 75841492 ID=MsG0380015850.01.T01:exon:24787;Parent=MsG0380015850.01.T01
Chr3 CDS 75839627 75839771 75839627 ID=MsG0380015850.01.T01:cds;Parent=MsG0380015850.01.T01
Chr3 CDS 75839879 75839955 75839879 ID=MsG0380015850.01.T01:cds;Parent=MsG0380015850.01.T01
Chr3 CDS 75840073 75840150 75840073 ID=MsG0380015850.01.T01:cds;Parent=MsG0380015850.01.T01
Chr3 CDS 75840307 75840380 75840307 ID=MsG0380015850.01.T01:cds;Parent=MsG0380015850.01.T01
Chr3 CDS 75841492 75841723 75841492 ID=MsG0380015850.01.T01:cds;Parent=MsG0380015850.01.T01
Gene Sequence

>MsG0380015850.01.T01

ATGGCTACTGCTGGTGATGTTCTCAGGCAGAGTTTACCGGAAGTAAGTGGTGCTGGTGTTGGAGAGTTGCACGTTCTTGCAGTGGATGATAGTTTTGTTGATCGCAAAGTCATTGAAAGGTTGCTTAAATTCACTTCTTGCAAAGTTACTGTTGTTGAGAGTGGAACTAGAGCTTTACAGTATCTTGGTTTGGATGGTGACACGAGTTCCATTGGTTTTGATGGTGTGAAGGTTAATATGATAATGACAGATTATTCTATGCCTGGGATGACAGGATATGAATTGCTCAAGAAGATTAAGCAGGAATCATCTGTATTTAGAGAAATTCCAGTGGTGGTTATGTCCTCTGAGAACATCTTGACCCGAATTGATAGTTGCTTGGAAGAAGGAGCAGAGGAGTTTCTATTGAAACCTGTCAAGTTGGCAGATGTGAAACGCTTAACAGATTTCATAATGAGAGGTGAAGGAAAGAAAGTCGGAGGAAAAATATCTCAAAAAAGAAGTCGGTCAGATGATTGTATTTCATCTCTATCAACGGCTTGTTCAACATGTGATCTGTCGCCATTGTCACCGTCTGCAATGTCGTCAAAGAAATCCAGACTATAA
Protein sequence

>MsG0380015850.01.T01

MATAGDVLRQSLPEVSGAGVGELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQYLGLDGDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLADVKRLTDFIMRGEGKKVGGKISQKRSRSDDCISSLSTACSTCDLSPLSPSAMSSKKSRL*