AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016539.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016539.01.T01 MTR_3g091770 90.909 385 35 0 1 385 1 385 0.0 729
MsG0380016539.01.T01 MTR_1g007840 49.724 362 153 11 42 383 42 394 3.46e-97 296
MsG0380016539.01.T01 MTR_7g117715 41.096 219 121 2 172 382 164 382 5.38e-44 158
MsG0380016539.01.T01 MTR_8g027430 31.068 309 173 10 88 379 41 326 1.23e-33 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016539.01.T01 AT2G46550 42.640 197 83 2 156 351 20 187 4.03e-40 143
MsG0380016539.01.T01 AT2G46550 42.640 197 83 2 156 351 92 259 8.03e-39 142
MsG0380016539.01.T01 AT2G46550 42.640 197 83 2 156 351 160 327 3.36e-38 142
MsG0380016539.01.T01 AT1G01240 34.583 240 104 8 177 395 117 324 1.15e-18 86.7
MsG0380016539.01.T01 AT1G01240 34.583 240 104 8 177 395 117 324 1.15e-18 86.7
MsG0380016539.01.T01 AT1G01240 34.583 240 104 8 177 395 117 324 1.15e-18 86.7
MsG0380016539.01.T01 AT1G01240 34.583 240 104 8 177 395 117 324 1.15e-18 86.7
MsG0380016539.01.T01 AT1G01240 34.583 240 104 8 177 395 117 324 1.15e-18 86.7

Find 108 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGGTGCTGGTTTACTTCT+TGG 0.202469 3:-84927361 MsG0380016539.01.T01:three_prime_UTR
TCAATCTTGCAGGAATAATT+TGG 0.210922 3:+84930345 None:intergenic
TTTGATGATCTTTCTTATAT+TGG 0.224529 3:-84930252 MsG0380016539.01.T01:CDS
GTCCTTCTGATCTTTCTTCT+TGG 0.239340 3:+84930107 None:intergenic
TGCTTCCGTTCCGTGTAATA+TGG 0.249409 3:-84931155 MsG0380016539.01.T01:five_prime_UTR
GCTACATGTGAAAAGCAATT+TGG 0.257743 3:-84930376 MsG0380016539.01.T01:CDS
ATTCAATTAATGATCAAATT+CGG 0.272962 3:-84930461 MsG0380016539.01.T01:CDS
TTCTATGCTGAATTTCTTGA+TGG 0.282392 3:-84930312 MsG0380016539.01.T01:CDS
TCCTTCTGATCTTTCTTCTT+GGG 0.301671 3:+84930108 None:intergenic
CTGTGATGTTTCCAATTTCT+CGG 0.308026 3:-84930055 MsG0380016539.01.T01:CDS
TCCGGCCAGATCAAAGATTC+TGG 0.317206 3:-84927762 MsG0380016539.01.T01:CDS
TTCAATTAATGATCAAATTC+GGG 0.324422 3:-84930460 MsG0380016539.01.T01:CDS
GATATGCTCCTTCTCGTTGT+AGG 0.329509 3:+84927623 None:intergenic
CAGGATTTATTTGAGAATCT+TGG 0.331107 3:+84927730 None:intergenic
GCAGTGGGTTTAAGCCTTGC+TGG 0.332793 3:-84927379 MsG0380016539.01.T01:exon
TATTGGAAGTGATAATTTAT+CGG 0.333273 3:-84930235 MsG0380016539.01.T01:CDS
CTTATCAGAATTTCGATTAC+CGG 0.352732 3:+84930419 None:intergenic
ATCAAGAAATTCAGCATAGA+AGG 0.355749 3:+84930314 None:intergenic
AGGATTCAAACAGTCATTTC+AGG 0.361955 3:-84929744 MsG0380016539.01.T01:intron
TGTAGCCACCATTTCATATC+TGG 0.379942 3:+84930393 None:intergenic
GGAACCAAGCTCAATCTTGC+AGG 0.382446 3:+84930335 None:intergenic
TTCATGTAAATAATGACATC+TGG 0.392152 3:-84927314 MsG0380016539.01.T01:three_prime_UTR
ACCCACCACAATCTACTTCC+TGG 0.403927 3:+84926955 None:intergenic
GGTTTAAGCCTTGCTGGTGC+TGG 0.404695 3:-84927373 MsG0380016539.01.T01:exon
AGAGGAATATTTACAAATGA+TGG 0.406846 3:+84927172 None:intergenic
TCTGGAACAACGCCTACTTC+TGG 0.411020 3:-84929778 MsG0380016539.01.T01:CDS
CTTGATGGAAATGTCAAGAA+TGG 0.416125 3:-84930297 MsG0380016539.01.T01:CDS
GCTTCCGTTCCGTGTAATAT+GGG 0.419136 3:-84931154 MsG0380016539.01.T01:five_prime_UTR
TTGATGGAAATGTCAAGAAT+GGG 0.419864 3:-84930296 MsG0380016539.01.T01:CDS
AATGCCGCTGGTTATGCATC+TGG 0.421397 3:-84929796 MsG0380016539.01.T01:CDS
CAAGATTCTCAAATAAATCC+TGG 0.422025 3:-84927729 MsG0380016539.01.T01:CDS
GTGCTGGTTTACTTCTTGGT+TGG 0.423182 3:-84927357 MsG0380016539.01.T01:three_prime_UTR
GGGCCTTGGTGGCGCACTGC+TGG 0.425344 3:-84929988 MsG0380016539.01.T01:CDS
GAAACGAGAAACCCGGGCCT+TGG 0.438293 3:-84930002 MsG0380016539.01.T01:CDS
AGCAGTGCGCCACCAAGGCC+CGG 0.441562 3:+84929990 None:intergenic
ACCAGCGGCATTGGAAGAAC+CGG 0.443827 3:+84929807 None:intergenic
TTACTTCTTGGTTGGACCAT+GGG 0.448358 3:-84927349 MsG0380016539.01.T01:three_prime_UTR
ACTTCTTGATCTTCAAGTAA+TGG 0.455166 3:+84930537 None:intergenic
TTAAACCAGAATCTTTGATC+TGG 0.455178 3:+84927757 None:intergenic
AAATGCTTAGGCTGAGGATG+AGG 0.459320 3:+84929901 None:intergenic
ATAAGCTACCAGATATGAAA+TGG 0.460867 3:-84930401 MsG0380016539.01.T01:CDS
AAGTAGATTGTGGTGGGTGC+AGG 0.461385 3:-84926950 MsG0380016539.01.T01:three_prime_UTR
GAAGAAAGATCAGAAGGACT+TGG 0.467901 3:-84930103 MsG0380016539.01.T01:CDS
AGATGCATAACCAGCGGCAT+TGG 0.468321 3:+84929798 None:intergenic
TTAAGCCAGAAAACTGAAAC+CGG 0.469886 3:-84929826 MsG0380016539.01.T01:CDS
TTTACTTCTTGGTTGGACCA+TGG 0.487875 3:-84927350 MsG0380016539.01.T01:three_prime_UTR
TATTCCTGCAAGATTGAGCT+TGG 0.489370 3:-84930339 MsG0380016539.01.T01:CDS
CTGGATTCAGACATTGACTA+AGG 0.490930 3:-84927295 MsG0380016539.01.T01:three_prime_UTR
GCGGATTCAGTCTGCATGCC+CGG 0.491743 3:-84930438 MsG0380016539.01.T01:CDS
AATCTCTGATCAAAATGCTT+AGG 0.493793 3:+84929889 None:intergenic
CACTGCTGGTAAAGATGAGT+TGG 0.498893 3:-84929974 MsG0380016539.01.T01:CDS
TTCTTGGTTGGACCATGGGA+TGG 0.500107 3:-84927345 MsG0380016539.01.T01:three_prime_UTR
TCAAAAGAGTGTATATATGA+TGG 0.502956 3:-84927213 MsG0380016539.01.T01:three_prime_UTR
TGATCATTAATTGAATTGCT+AGG 0.503875 3:+84930468 None:intergenic
TCAGTAATGCTGCTGTTCCC+AGG 0.504610 3:+84927711 None:intergenic
CTCCTGCAAAAGTATGCGAC+AGG 0.504632 3:-84931222 None:intergenic
ACGAGAAACCCGGGCCTTGG+TGG 0.506203 3:-84929999 MsG0380016539.01.T01:CDS
GGAAATTGCTGGTTTAGTGT+TGG 0.507613 3:+84926882 None:intergenic
ACCGGTTCTTCCAATGCCGC+TGG 0.508138 3:-84929808 MsG0380016539.01.T01:CDS
AAATATATACTTACAACTAA+CGG 0.510530 3:+84927138 None:intergenic
ACCAGAATCTTTGATCTGGC+CGG 0.513244 3:+84927761 None:intergenic
TGTTTCTAAGTTGAAGGCAG+AGG 0.515040 3:+84927526 None:intergenic
CTAACGGTTCTTAACAAAAG+AGG 0.521804 3:+84927154 None:intergenic
AGATGTCATTATTTACATGA+AGG 0.526159 3:+84927316 None:intergenic
AATGATGGAAATTGAACCAA+TGG 0.530908 3:+84927187 None:intergenic
TTATCAGAATTTCGATTACC+GGG 0.547283 3:+84930420 None:intergenic
GCAGTGCGCCACCAAGGCCC+GGG 0.550264 3:+84929991 None:intergenic
ACTTGAAGATCAAGAAGTAA+TGG 0.550322 3:-84930532 MsG0380016539.01.T01:exon
TCTCGAGGAAGTGAACAGTC+AGG 0.552998 3:+84927047 None:intergenic
AAGAAAGATCAGAAGGACTT+GGG 0.556919 3:-84930102 MsG0380016539.01.T01:CDS
TGAAAAGAACAGCCAGAAGT+AGG 0.557563 3:+84929766 None:intergenic
TGCTAAATTGAGATGTGGAA+TGG 0.557944 3:+84931128 None:intergenic
AAGATTCTCAAATAAATCCT+GGG 0.558881 3:-84927728 MsG0380016539.01.T01:CDS
ATTATATACAAAGCCTTGCA+TGG 0.562366 3:+84927075 None:intergenic
TTTGATCAGAGATTCTCAAA+GGG 0.562672 3:-84929880 MsG0380016539.01.T01:CDS
TTCTCAAACAAGAGCAAGAG+AGG 0.562960 3:-84927667 MsG0380016539.01.T01:CDS
AATGCTTAGGCTGAGGATGA+GGG 0.578158 3:+84929902 None:intergenic
GTATATATGATGGTATCCAT+TGG 0.579504 3:-84927203 MsG0380016539.01.T01:three_prime_UTR
TCCCAAGAAGAAAGATCAGA+AGG 0.581602 3:-84930109 MsG0380016539.01.T01:CDS
TGTGTGATGTTTGCCATGCA+AGG 0.583928 3:-84927088 MsG0380016539.01.T01:three_prime_UTR
TGCCTTGCTAAATTGAGATG+TGG 0.591531 3:+84931123 None:intergenic
AACAGATCTCTGAGCAACAA+AGG 0.593658 3:+84929948 None:intergenic
TTCCACATCTCAATTTAGCA+AGG 0.594985 3:-84931125 MsG0380016539.01.T01:five_prime_UTR
AAAACGGCATCACATTTGAT+GGG 0.595069 3:-84930024 MsG0380016539.01.T01:CDS
TGCTAAATCTCTTTCCACAC+AGG 0.599079 3:-84927491 MsG0380016539.01.T01:CDS
TCAAGTTGCATTCGCCTGTG+TGG 0.599877 3:+84927477 None:intergenic
TGATCAAAATGCTTAGGCTG+AGG 0.600977 3:+84929895 None:intergenic
TCTGAGTTCTGAATTAAGCA+AGG 0.603883 3:-84931094 MsG0380016539.01.T01:intron
GACCAGGAAGTAGATTGTGG+TGG 0.606992 3:-84926957 MsG0380016539.01.T01:three_prime_UTR
TTACCAGCAGTGCGCCACCA+AGG 0.611001 3:+84929985 None:intergenic
ACCAGGAAGTAGATTGTGGT+GGG 0.611419 3:-84926956 MsG0380016539.01.T01:three_prime_UTR
AAATTGCAGTTATAGAGACC+AGG 0.613822 3:-84926973 MsG0380016539.01.T01:three_prime_UTR
TTGATGGGAAACGAGAAACC+CGG 0.620386 3:-84930009 MsG0380016539.01.T01:CDS
TGATGGGAAACGAGAAACCC+GGG 0.628784 3:-84930008 MsG0380016539.01.T01:CDS
GAATGGAATCCCATATTACA+CGG 0.635466 3:+84931145 None:intergenic
GCAAGAAGCCTACAACGAGA+AGG 0.635494 3:-84927631 MsG0380016539.01.T01:CDS
AGAGACCAGGAAGTAGATTG+TGG 0.637034 3:-84926960 MsG0380016539.01.T01:three_prime_UTR
GAAGTAAACCAGCACCAGCA+AGG 0.638132 3:+84927365 None:intergenic
AGCTACCAGATATGAAATGG+TGG 0.640041 3:-84930398 MsG0380016539.01.T01:CDS
TGATGGAAATGTCAAGAATG+GGG 0.645416 3:-84930295 MsG0380016539.01.T01:CDS
AACTCTTTGCATACAAACAG+TGG 0.649203 3:-84927572 MsG0380016539.01.T01:CDS
AATTAATGATCAAATTCGGG+CGG 0.649669 3:-84930457 MsG0380016539.01.T01:CDS
TGTGGAAAGAGATTTAGCAA+TGG 0.650005 3:+84927495 None:intergenic
GAATCCCATATTACACGGAA+CGG 0.650366 3:+84931150 None:intergenic
TGAAGGAAACATCCATCCCA+TGG 0.651460 3:+84927333 None:intergenic
TGTTCCAGATGCATAACCAG+CGG 0.695980 3:+84929792 None:intergenic
TCCTGCAAAAGTATGCGACA+GGG 0.714077 3:-84931221 None:intergenic
GTAGTAGGAGAGACATGATG+TGG 0.764403 3:+84930204 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAATACAATTTACAA+TGG + Chr3:84927168-84927187 None:intergenic 10.0%
!!! AACTGTTTTTTATATTAATT+AGG - Chr3:84927542-84927561 MsG0380016539.01.T01:CDS 10.0%
!!! ATTGTTTCTTTATTTTTTTT+TGG - Chr3:84930220-84930239 MsG0380016539.01.T01:CDS 10.0%
!!! TTGTTTCTTTATTTTTTTTT+GGG - Chr3:84930221-84930240 MsG0380016539.01.T01:CDS 10.0%
!! AAATATATACTTACAACTAA+CGG + Chr3:84930967-84930986 None:intergenic 15.0%
!! ATTCAATTAATGATCAAATT+CGG - Chr3:84927641-84927660 MsG0380016539.01.T01:CDS 15.0%
!! TCATAATTACTAATTTGAAT+GGG - Chr3:84928667-84928686 MsG0380016539.01.T01:intron 15.0%
!! TTCATAATTACTAATTTGAA+TGG - Chr3:84928666-84928685 MsG0380016539.01.T01:intron 15.0%
!! TTTAAATTATTAAACTGCTA+AGG - Chr3:84928479-84928498 MsG0380016539.01.T01:intron 15.0%
!!! ATATAAAAAACAGTTTTCTA+TGG + Chr3:84927537-84927556 None:intergenic 15.0%
!! AAATTTATTGTCAAACTATG+TGG - Chr3:84930302-84930321 MsG0380016539.01.T01:CDS 20.0%
!! AACTAAAACTAGTGTAATAT+TGG + Chr3:84929183-84929202 None:intergenic 20.0%
!! AAGATCAATAACAAAAAATG+TGG - Chr3:84930675-84930694 MsG0380016539.01.T01:intron 20.0%
!! AATAAAGAAACAATGTTGAT+AGG + Chr3:84930214-84930233 None:intergenic 20.0%
!! AGAATATAAATAGTGTGATT+CGG + Chr3:84929475-84929494 None:intergenic 20.0%
!! AGATCAATAACAAAAAATGT+GGG - Chr3:84930676-84930695 MsG0380016539.01.T01:intron 20.0%
!! ATCATTTCTATATGTTAAAG+AGG - Chr3:84930066-84930085 MsG0380016539.01.T01:CDS 20.0%
!! CAAAAAAATTAGTATCTGAT+TGG - Chr3:84927608-84927627 MsG0380016539.01.T01:CDS 20.0%
!! TAAATAAAAGAAAACAGGTA+AGG + Chr3:84929788-84929807 None:intergenic 20.0%
!! TAAATATTCAAATCGTGATT+TGG + Chr3:84929879-84929898 None:intergenic 20.0%
!! TAGTCATTTCTATATGTTAA+AGG - Chr3:84930134-84930153 MsG0380016539.01.T01:CDS 20.0%
!! TATAACGATTTATATCAACT+GGG + Chr3:84929377-84929396 None:intergenic 20.0%
!! TATTGGAAGTGATAATTTAT+CGG - Chr3:84927867-84927886 MsG0380016539.01.T01:intron 20.0%
!! TCAAATTAGTAATTATGAAG+AGG + Chr3:84928665-84928684 None:intergenic 20.0%
!! TTCAATTAATGATCAAATTC+GGG - Chr3:84927642-84927661 MsG0380016539.01.T01:CDS 20.0%
!!! AAATTTAAGTTAGCATAATC+AGG + Chr3:84930288-84930307 None:intergenic 20.0%
!!! ATACTAATTTTTTTGGAATC+TGG + Chr3:84927603-84927622 None:intergenic 20.0%
!!! CAATCAGATACTAATTTTTT+TGG + Chr3:84927610-84927629 None:intergenic 20.0%
!!! CTGTTCTTTTATAAAAGAAA+TGG + Chr3:84929572-84929591 None:intergenic 20.0%
!!! GAGAAAATTTTGCATTTTTT+AGG - Chr3:84931074-84931093 MsG0380016539.01.T01:intron 20.0%
!!! GATGATGATGATTAAATTAA+AGG + Chr3:84927054-84927073 None:intergenic 20.0%
!!! TAATTTTAAATGTATAGAGC+TGG - Chr3:84928937-84928956 MsG0380016539.01.T01:intron 20.0%
!!! TTTGATGATCTTTCTTATAT+TGG - Chr3:84927850-84927869 MsG0380016539.01.T01:intron 20.0%
!!! TTTTGCATTTTTTAGGAAAT+TGG - Chr3:84931081-84931100 MsG0380016539.01.T01:intron 20.0%
! AAGATTCTCAAATAAATCCT+GGG - Chr3:84930374-84930393 MsG0380016539.01.T01:CDS 25.0%
! AAGGAAAAACATATCTTTCA+AGG + Chr3:84929075-84929094 None:intergenic 25.0%
! AATAACAAAAAATGTGGGAT+TGG - Chr3:84930681-84930700 MsG0380016539.01.T01:intron 25.0%
! AATTAGTAATTATGAAGAGG+CGG + Chr3:84928662-84928681 None:intergenic 25.0%
! ACTAAGAATATCTTATCTCA+TGG + Chr3:84929123-84929142 None:intergenic 25.0%
! AGAGGAATATTTACAAATGA+TGG + Chr3:84930933-84930952 None:intergenic 25.0%
! AGATAAGATATTCTTAGTCA+TGG - Chr3:84929125-84929144 MsG0380016539.01.T01:intron 25.0%
! AGATATGTTTGAAAAAGCAA+TGG + Chr3:84927455-84927474 None:intergenic 25.0%
! AGATGAGGGATTAATATAAT+GGG - Chr3:84930006-84930025 MsG0380016539.01.T01:CDS 25.0%
! AGATGTCATTATTTACATGA+AGG + Chr3:84930789-84930808 None:intergenic 25.0%
! AGCAGTAAATAAAAGAAAAC+AGG + Chr3:84929793-84929812 None:intergenic 25.0%
! AGTGAACTAGATGATATTAA+TGG + Chr3:84930180-84930199 None:intergenic 25.0%
! AGTGGTTAAAAATTAACTAG+TGG + Chr3:84929155-84929174 None:intergenic 25.0%
! ATTCAAAAACACATAACAGT+TGG + Chr3:84928771-84928790 None:intergenic 25.0%
! ATTTCTATATGTTAAAGAGG+TGG - Chr3:84930069-84930088 MsG0380016539.01.T01:CDS 25.0%
! CTAAGAATATCTTATCTCAT+GGG + Chr3:84929122-84929141 None:intergenic 25.0%
! GATATTAATGGTGAAAACAA+TGG + Chr3:84930168-84930187 None:intergenic 25.0%
! GCATACAAAATGCAATTTAA+AGG + Chr3:84929211-84929230 None:intergenic 25.0%
! GTATAACGATTTATATCAAC+TGG + Chr3:84929378-84929397 None:intergenic 25.0%
! TAAGAATATCTTATCTCATG+GGG + Chr3:84929121-84929140 None:intergenic 25.0%
! TGATCATTAATTGAATTGCT+AGG + Chr3:84927637-84927656 None:intergenic 25.0%
! TTCATGTAAATAATGACATC+TGG - Chr3:84930788-84930807 MsG0380016539.01.T01:intron 25.0%
! TTTCTATATGTTAAAGAGGT+GGG - Chr3:84930070-84930089 MsG0380016539.01.T01:CDS 25.0%
!! AAAAATGCAAAATTTTCTCG+AGG + Chr3:84931073-84931092 None:intergenic 25.0%
!! ATTAATATCATCTAGTTCAC+TGG - Chr3:84930179-84930198 MsG0380016539.01.T01:CDS 25.0%
!!! ATTTTCAGATGTTGGTTTTT+TGG - Chr3:84928023-84928042 MsG0380016539.01.T01:intron 25.0%
!!! GTGAGTTTTTCTAAAGTTTA+AGG - Chr3:84929009-84929028 MsG0380016539.01.T01:intron 25.0%
!!! TCATTAATTATTTCTGTAGC+TGG - Chr3:84927322-84927341 MsG0380016539.01.T01:three_prime_UTR 25.0%
!!! TGTTTTTGTTTCTAAGTTGA+AGG + Chr3:84930585-84930604 None:intergenic 25.0%
!!! TTGTTTTTCATACATGTAGT+AGG + Chr3:84927916-84927935 None:intergenic 25.0%
AAAATTAAGTCTGTCGAACA+AGG + Chr3:84928924-84928943 None:intergenic 30.0%
AACAGCCAAATTGAAGAAAA+AGG + Chr3:84927269-84927288 None:intergenic 30.0%
AAGAATATCTTATCTCATGG+GGG + Chr3:84929120-84929139 None:intergenic 30.0%
AATCTCTGATCAAAATGCTT+AGG + Chr3:84928216-84928235 None:intergenic 30.0%
AATTAATGATCAAATTCGGG+CGG - Chr3:84927645-84927664 MsG0380016539.01.T01:CDS 30.0%
ACCATCATATATACACTCTT+TGG + Chr3:84930893-84930912 None:intergenic 30.0%
ACTTCTTGATCTTCAAGTAA+TGG + Chr3:84927568-84927587 None:intergenic 30.0%
ACTTGAAGATCAAGAAGTAA+TGG - Chr3:84927570-84927589 MsG0380016539.01.T01:CDS 30.0%
AGCTATCTTCAAGTAATATG+AGG - Chr3:84928632-84928651 MsG0380016539.01.T01:intron 30.0%
ATAAGCTACCAGATATGAAA+TGG - Chr3:84927701-84927720 MsG0380016539.01.T01:CDS 30.0%
ATCAAGAAATTCAGCATAGA+AGG + Chr3:84927791-84927810 None:intergenic 30.0%
ATCGTTATACGTATCTATTC+TGG - Chr3:84929388-84929407 MsG0380016539.01.T01:intron 30.0%
ATTAGTAATTATGAAGAGGC+GGG + Chr3:84928661-84928680 None:intergenic 30.0%
ATTATATACAAAGCCTTGCA+TGG + Chr3:84931030-84931049 None:intergenic 30.0%
CAAGATTCTCAAATAAATCC+TGG - Chr3:84930373-84930392 MsG0380016539.01.T01:CDS 30.0%
CAGGATTTATTTGAGAATCT+TGG + Chr3:84930375-84930394 None:intergenic 30.0%
CTTATCAGAATTTCGATTAC+CGG + Chr3:84927686-84927705 None:intergenic 30.0%
CTTCAATGATGATTCTATCT+TGG + Chr3:84929616-84929635 None:intergenic 30.0%
GAGATCCAACAAAATTAACT+TGG + Chr3:84928902-84928921 None:intergenic 30.0%
GAGATGAGGGATTAATATAA+TGG - Chr3:84930005-84930024 MsG0380016539.01.T01:CDS 30.0%
GCAGAAATCTCAATAAAACA+GGG + Chr3:84927218-84927237 None:intergenic 30.0%
GGAAAAAAATACTGTAGGAA+GGG + Chr3:84929664-84929683 None:intergenic 30.0%
GTATATATGATGGTATCCAT+TGG - Chr3:84930899-84930918 MsG0380016539.01.T01:intron 30.0%
GTGAATGATAGTACTAATGA+TGG + Chr3:84927402-84927421 None:intergenic 30.0%
TCAATCTTGCAGGAATAATT+TGG + Chr3:84927760-84927779 None:intergenic 30.0%
TCCTAATTAAATGACCATGA+TGG + Chr3:84928438-84928457 None:intergenic 30.0%
TTAAACCAGAATCTTTGATC+TGG + Chr3:84930348-84930367 None:intergenic 30.0%
TTATCAGAATTTCGATTACC+GGG + Chr3:84927685-84927704 None:intergenic 30.0%
TTATGTTTCAGACGCTTATA+TGG - Chr3:84929268-84929287 MsG0380016539.01.T01:intron 30.0%
TTCTATGCTGAATTTCTTGA+TGG - Chr3:84927790-84927809 MsG0380016539.01.T01:intron 30.0%
TTGATGGAAATGTCAAGAAT+GGG - Chr3:84927806-84927825 MsG0380016539.01.T01:intron 30.0%
TTTGATCAGAGATTCTCAAA+GGG - Chr3:84928222-84928241 MsG0380016539.01.T01:intron 30.0%
! AAACATTGATGACATTTGAC+AGG - Chr3:84929953-84929972 MsG0380016539.01.T01:CDS 30.0%
! AATGATGGAAATTGAACCAA+TGG + Chr3:84930918-84930937 None:intergenic 30.0%
! AGGGATTAATATAATGGGAT+AGG - Chr3:84930011-84930030 MsG0380016539.01.T01:CDS 30.0%
! ATATAAATAGTGTGATTCGG+AGG + Chr3:84929472-84929491 None:intergenic 30.0%
! ATCCAACAAAATTAACTTGG+TGG + Chr3:84928899-84928918 None:intergenic 30.0%
! ATTTTCTTCGATCTACGATT+TGG - Chr3:84929841-84929860 MsG0380016539.01.T01:CDS 30.0%
! CATGAGTCTTTTCTTTAAAC+AGG - Chr3:84930501-84930520 MsG0380016539.01.T01:CDS 30.0%
! TATAAATAGTGTGATTCGGA+GGG + Chr3:84929471-84929490 None:intergenic 30.0%
! TTGAAGATAGCTAGCTTATT+TGG + Chr3:84928624-84928643 None:intergenic 30.0%
! TTTTGATCAGAGATTCTCAA+AGG - Chr3:84928221-84928240 MsG0380016539.01.T01:intron 30.0%
!! CTGAATTTTGACAAACTGAA+CGG + Chr3:84929923-84929942 None:intergenic 30.0%
!! GCTGTTTTAGGTAATGAATT+TGG - Chr3:84927283-84927302 MsG0380016539.01.T01:three_prime_UTR 30.0%
!! TAATTATTTCTGTAGCTGGA+AGG - Chr3:84927326-84927345 MsG0380016539.01.T01:three_prime_UTR 30.0%
!! TGTTTTTGAATTCCCATGAT+AGG - Chr3:84928780-84928799 MsG0380016539.01.T01:intron 30.0%
!! TTCTTCAATTTGGCTGTTTT+AGG - Chr3:84927271-84927290 MsG0380016539.01.T01:three_prime_UTR 30.0%
!!! CTTTTTTATACCTCACTACT+GGG - Chr3:84928709-84928728 MsG0380016539.01.T01:intron 30.0%
!!! TGTTTTTCTAAAGTCTACTC+TGG - Chr3:84927191-84927210 MsG0380016539.01.T01:three_prime_UTR 30.0%
AAAAACGGCATCACATTTGA+TGG - Chr3:84928077-84928096 MsG0380016539.01.T01:intron 35.0%
AAAACGGCATCACATTTGAT+GGG - Chr3:84928078-84928097 MsG0380016539.01.T01:intron 35.0%
AAACAAGATAAGGCGACTAA+AGG + Chr3:84929742-84929761 None:intergenic 35.0%
AAACAGTTAGAAGGAGATGA+GGG - Chr3:84929992-84930011 MsG0380016539.01.T01:CDS 35.0%
AAATTGCAGTTATAGAGACC+AGG - Chr3:84931129-84931148 MsG0380016539.01.T01:five_prime_UTR 35.0%
AACAAGATAAGGCGACTAAA+GGG + Chr3:84929741-84929760 None:intergenic 35.0%
AACTCTTTGCATACAAACAG+TGG - Chr3:84930530-84930549 MsG0380016539.01.T01:exon 35.0%
AAGAAAGATCAGAAGGACTT+GGG - Chr3:84928000-84928019 MsG0380016539.01.T01:intron 35.0%
AATAGAGGGAAACAGTTAGA+AGG - Chr3:84929983-84930002 MsG0380016539.01.T01:CDS 35.0%
AATGGTTCTTCATGCATGTT+TGG + Chr3:84927150-84927169 None:intergenic 35.0%
ACCCAGGATAAGGATATTTA+TGG - Chr3:84928871-84928890 MsG0380016539.01.T01:intron 35.0%
AGAATATCTTATCTCATGGG+GGG + Chr3:84929119-84929138 None:intergenic 35.0%
AGCATATAATGAGAAGAGAG+TGG + Chr3:84929046-84929065 None:intergenic 35.0%
AGGATTCAAACAGTCATTTC+AGG - Chr3:84928358-84928377 MsG0380016539.01.T01:intron 35.0%
AGTGTAATATTGGAGAACAG+TGG + Chr3:84929173-84929192 None:intergenic 35.0%
ATAACAGTTGGCTAAGTGAT+GGG + Chr3:84928759-84928778 None:intergenic 35.0%
CACCATCTTCAAACAAGATA+AGG + Chr3:84929752-84929771 None:intergenic 35.0%
CCAGGATAAGGATATTTATG+GGG - Chr3:84928873-84928892 MsG0380016539.01.T01:intron 35.0%
CCAGTAGTGAGGTATAAAAA+AGG + Chr3:84928711-84928730 None:intergenic 35.0%
CCCAGGATAAGGATATTTAT+GGG - Chr3:84928872-84928891 MsG0380016539.01.T01:intron 35.0%
CCCATAAATATCCTTATCCT+GGG + Chr3:84928875-84928894 None:intergenic 35.0%
CTAACGGTTCTTAACAAAAG+AGG + Chr3:84930951-84930970 None:intergenic 35.0%
CTGTGATGTTTCCAATTTCT+CGG - Chr3:84928047-84928066 MsG0380016539.01.T01:intron 35.0%
CTTGATGGAAATGTCAAGAA+TGG - Chr3:84927805-84927824 MsG0380016539.01.T01:intron 35.0%
GAATGGAATCCCATATTACA+CGG + Chr3:84926960-84926979 None:intergenic 35.0%
GCATATAATGAGAAGAGAGT+GGG + Chr3:84929045-84929064 None:intergenic 35.0%
GCCATCATGGTCATTTAATT+AGG - Chr3:84928434-84928453 MsG0380016539.01.T01:intron 35.0%
GCTACATGTGAAAAGCAATT+TGG - Chr3:84927726-84927745 MsG0380016539.01.T01:CDS 35.0%
GGCAGAAATCTCAATAAAAC+AGG + Chr3:84927219-84927238 None:intergenic 35.0%
GGGAAAAAAATACTGTAGGA+AGG + Chr3:84929665-84929684 None:intergenic 35.0%
TCCTTCTGATCTTTCTTCTT+GGG + Chr3:84927997-84928016 None:intergenic 35.0%
TCTAACTGAGTTCAGTTCAT+TGG - Chr3:84927480-84927499 MsG0380016539.01.T01:CDS 35.0%
TGATGGAAATGTCAAGAATG+GGG - Chr3:84927807-84927826 MsG0380016539.01.T01:intron 35.0%
TGCAAAACACTGTTTAGACA+GGG + Chr3:84929689-84929708 None:intergenic 35.0%
TGCAAGAATGCGAAAAATTG+AGG - Chr3:84927942-84927961 MsG0380016539.01.T01:intron 35.0%
TGCTAAATTGAGATGTGGAA+TGG + Chr3:84926977-84926996 None:intergenic 35.0%
TGTGGAAAGAGATTTAGCAA+TGG + Chr3:84930610-84930629 None:intergenic 35.0%
TTAAGCCAGAAAACTGAAAC+CGG - Chr3:84928276-84928295 MsG0380016539.01.T01:intron 35.0%
TTATTCCATTGTTCGTGAGA+CGG - Chr3:84928533-84928552 MsG0380016539.01.T01:intron 35.0%
TTCCACATCTCAATTTAGCA+AGG - Chr3:84926977-84926996 MsG0380016539.01.T01:three_prime_UTR 35.0%
TTTCTCGGTCTCAGAAAAAA+CGG - Chr3:84928062-84928081 MsG0380016539.01.T01:intron 35.0%
! CGATCTACGATTTGGAAATT+AGG - Chr3:84929849-84929868 MsG0380016539.01.T01:CDS 35.0%
! GCACTCCTTTTTCTTCAATT+TGG - Chr3:84927261-84927280 MsG0380016539.01.T01:three_prime_UTR 35.0%
! TAACATGCCTTTAAGAAACC+AGG + Chr3:84929536-84929555 None:intergenic 35.0%
!! TCTGAGTTCTGAATTAAGCA+AGG - Chr3:84927008-84927027 MsG0380016539.01.T01:three_prime_UTR 35.0%
!!! CCTTTTTTATACCTCACTAC+TGG - Chr3:84928708-84928727 MsG0380016539.01.T01:intron 35.0%
!!! GAATTTGGCAGTTTTAAGTC+AGG - Chr3:84927298-84927317 MsG0380016539.01.T01:three_prime_UTR 35.0%
!!! GTTTTCTGGCTTAAAGATGA+TGG + Chr3:84928270-84928289 None:intergenic 35.0%
!!! TTTTTCTGAGACCGAGAAAT+TGG + Chr3:84928061-84928080 None:intergenic 35.0%
AAAACACTGTTTAGACAGGG+TGG + Chr3:84929686-84929705 None:intergenic 40.0%
AAACACTGTTTAGACAGGGT+GGG + Chr3:84929685-84929704 None:intergenic 40.0%
AACAGATCTCTGAGCAACAA+AGG + Chr3:84928157-84928176 None:intergenic 40.0%
AATGGAATGGCAAAGTCAGA+AGG + Chr3:84929094-84929113 None:intergenic 40.0%
ACAAGATAAGGCGACTAAAG+GGG + Chr3:84929740-84929759 None:intergenic 40.0%
ACCATGATGGCATATATCAC+AGG + Chr3:84928425-84928444 None:intergenic 40.0%
ACGACAACTTTCTCCTATCA+TGG + Chr3:84928796-84928815 None:intergenic 40.0%
ACTGTTTCCCTCTATTACAC+AGG + Chr3:84929979-84929998 None:intergenic 40.0%
AGCTACCAGATATGAAATGG+TGG - Chr3:84927704-84927723 MsG0380016539.01.T01:CDS 40.0%
ATAGAGCTGGTAACATATGC+AGG - Chr3:84928950-84928969 MsG0380016539.01.T01:intron 40.0%
CATAACAGTTGGCTAAGTGA+TGG + Chr3:84928760-84928779 None:intergenic 40.0%
CCCCATAAATATCCTTATCC+TGG + Chr3:84928876-84928895 None:intergenic 40.0%
CGAATGAATTGAGATTCCTG+CGG + Chr3:84929424-84929443 None:intergenic 40.0%
CGACAACTTTCTCCTATCAT+GGG + Chr3:84928795-84928814 None:intergenic 40.0%
GAAACAGTTAGAAGGAGATG+AGG - Chr3:84929991-84930010 MsG0380016539.01.T01:CDS 40.0%
GAAGAAAGATCAGAAGGACT+TGG - Chr3:84927999-84928018 MsG0380016539.01.T01:intron 40.0%
GAAGCTGAAGTATGGAACAT+TGG + Chr3:84928597-84928616 None:intergenic 40.0%
GAATCCCATATTACACGGAA+CGG + Chr3:84926955-84926974 None:intergenic 40.0%
GATAGGTCACATTTGTCTAG+TGG - Chr3:84930028-84930047 MsG0380016539.01.T01:CDS 40.0%
GGGTGGGAAAAAAATACTGT+AGG + Chr3:84929669-84929688 None:intergenic 40.0%
GTATGCCACCAAGTTAAACA+AGG - Chr3:84929225-84929244 MsG0380016539.01.T01:intron 40.0%
GTCCTTCTGATCTTTCTTCT+TGG + Chr3:84927998-84928017 None:intergenic 40.0%
GTGCAAAACACTGTTTAGAC+AGG + Chr3:84929690-84929709 None:intergenic 40.0%
GTGTACATAAGAGCAGTGTT+TGG + Chr3:84927240-84927259 None:intergenic 40.0%
TAGAGCTGGTAACATATGCA+GGG - Chr3:84928951-84928970 MsG0380016539.01.T01:intron 40.0%
TATTCCTGCAAGATTGAGCT+TGG - Chr3:84927763-84927782 MsG0380016539.01.T01:CDS 40.0%
TCCCAAGAAGAAAGATCAGA+AGG - Chr3:84927993-84928012 MsG0380016539.01.T01:intron 40.0%
TCCTGTGATATATGCCATCA+TGG - Chr3:84928421-84928440 MsG0380016539.01.T01:intron 40.0%
TGAAAAGAACAGCCAGAAGT+AGG + Chr3:84928339-84928358 None:intergenic 40.0%
TGAAGATGGTGCTCTTTCTT+TGG - Chr3:84929761-84929780 MsG0380016539.01.T01:CDS 40.0%
TGATCAAAATGCTTAGGCTG+AGG + Chr3:84928210-84928229 None:intergenic 40.0%
TGCCTTGCTAAATTGAGATG+TGG + Chr3:84926982-84927001 None:intergenic 40.0%
TGCTAAATCTCTTTCCACAC+AGG - Chr3:84930611-84930630 MsG0380016539.01.T01:intron 40.0%
TGTAGCCACCATTTCATATC+TGG + Chr3:84927712-84927731 None:intergenic 40.0%
TGTGAAACTTGTCTTGGTCT+CGG - Chr3:84928506-84928525 MsG0380016539.01.T01:intron 40.0%
TTACTTCTTGGTTGGACCAT+GGG - Chr3:84930753-84930772 MsG0380016539.01.T01:intron 40.0%
TTCTCAAACAAGAGCAAGAG+AGG - Chr3:84930435-84930454 MsG0380016539.01.T01:CDS 40.0%
TTTACTTCTTGGTTGGACCA+TGG - Chr3:84930752-84930771 MsG0380016539.01.T01:intron 40.0%
! CGCCTTATCTTGTTTGAAGA+TGG - Chr3:84929747-84929766 MsG0380016539.01.T01:CDS 40.0%
! CTGGATTCAGACATTGACTA+AGG - Chr3:84930807-84930826 MsG0380016539.01.T01:intron 40.0%
! GACTTGGGATTTTCAGATGT+TGG - Chr3:84928015-84928034 MsG0380016539.01.T01:intron 40.0%
! GGCCACCAAGTTAATTTTGT+TGG - Chr3:84928894-84928913 MsG0380016539.01.T01:intron 40.0%
! TCAACGCACCTTGTTTAACT+TGG + Chr3:84929236-84929255 None:intergenic 40.0%
! TGTTTCTAAGTTGAAGGCAG+AGG + Chr3:84930579-84930598 None:intergenic 40.0%
! TTTTATACCTCACTACTGGG+TGG - Chr3:84928712-84928731 MsG0380016539.01.T01:intron 40.0%
!! AAGAACCGGTTTCAGTTTTC+TGG + Chr3:84928284-84928303 None:intergenic 40.0%
!! TACTTCTGGCTGTTCTTTTC+AGG - Chr3:84928338-84928357 MsG0380016539.01.T01:intron 40.0%
!! TTGGCTTTGAAGCTGAAGTA+TGG + Chr3:84928605-84928624 None:intergenic 40.0%
AAATGCTTAGGCTGAGGATG+AGG + Chr3:84928204-84928223 None:intergenic 45.0%
AACTGAACGGCTGCAAATCA+TGG + Chr3:84929910-84929929 None:intergenic 45.0%
AAGGGGGACAAAAATGGAGA+AGG + Chr3:84929723-84929742 None:intergenic 45.0%
AATGCTTAGGCTGAGGATGA+GGG + Chr3:84928203-84928222 None:intergenic 45.0%
AATTCACTCATGGCTAACCC+AGG - Chr3:84928855-84928874 MsG0380016539.01.T01:intron 45.0%
ACCAGAATCTTTGATCTGGC+CGG + Chr3:84930344-84930363 None:intergenic 45.0%
ACCAGGAAGTAGATTGTGGT+GGG - Chr3:84931146-84931165 MsG0380016539.01.T01:five_prime_UTR 45.0%
AGAGACCAGGAAGTAGATTG+TGG - Chr3:84931142-84931161 MsG0380016539.01.T01:five_prime_UTR 45.0%
CAAGATAAGGCGACTAAAGG+GGG + Chr3:84929739-84929758 None:intergenic 45.0%
CACTGCTGGTAAAGATGAGT+TGG - Chr3:84928128-84928147 MsG0380016539.01.T01:intron 45.0%
CAGACCATGCACCATTAAGT+GGG - Chr3:84928821-84928840 MsG0380016539.01.T01:intron 45.0%
CATAGGTCACATTTGTCGAG+TGG - Chr3:84930096-84930115 MsG0380016539.01.T01:CDS 45.0%
CGACTAAAGGGGGACAAAAA+TGG + Chr3:84929729-84929748 None:intergenic 45.0%
CTGTATGTGCAGCCTTGAAA+CGG - Chr3:84929496-84929515 MsG0380016539.01.T01:intron 45.0%
CTTATCTCATGGGGGGATAA+TGG + Chr3:84929112-84929131 None:intergenic 45.0%
GATATGCTCCTTCTCGTTGT+AGG + Chr3:84930482-84930501 None:intergenic 45.0%
GCTTCCGTTCCGTGTAATAT+GGG - Chr3:84926948-84926967 MsG0380016539.01.T01:three_prime_UTR 45.0%
GGCAACTGTGAAACTTGTCT+TGG - Chr3:84928500-84928519 MsG0380016539.01.T01:intron 45.0%
GTAGTAGGAGAGACATGATG+TGG + Chr3:84927901-84927920 None:intergenic 45.0%
GTGAAACTTGTCTTGGTCTC+GGG - Chr3:84928507-84928526 MsG0380016539.01.T01:intron 45.0%
GTTAAAGAGGTGGGAGTCAT+AGG - Chr3:84930079-84930098 MsG0380016539.01.T01:CDS 45.0%
TCAGACCATGCACCATTAAG+TGG - Chr3:84928820-84928839 MsG0380016539.01.T01:intron 45.0%
TCCTAGACCCAATTCACTCA+TGG - Chr3:84928845-84928864 MsG0380016539.01.T01:intron 45.0%
TCTATGGATCAAGCAGCATC+TGG + Chr3:84927521-84927540 None:intergenic 45.0%
TGAAGGAAACATCCATCCCA+TGG + Chr3:84930772-84930791 None:intergenic 45.0%
TGACAGGCCTGTGTAATAGA+GGG - Chr3:84929969-84929988 MsG0380016539.01.T01:CDS 45.0%
TGCTTCCGTTCCGTGTAATA+TGG - Chr3:84926947-84926966 MsG0380016539.01.T01:three_prime_UTR 45.0%
TGTATGTGCAGCCTTGAAAC+GGG - Chr3:84929497-84929516 MsG0380016539.01.T01:intron 45.0%
TGTGTGATGTTTGCCATGCA+AGG - Chr3:84931014-84931033 MsG0380016539.01.T01:intron 45.0%
TGTTCCAGATGCATAACCAG+CGG + Chr3:84928313-84928332 None:intergenic 45.0%
TTCATTACCACCCAGTAGTG+AGG + Chr3:84928722-84928741 None:intergenic 45.0%
TTCTGGACATGAATTACCGC+AGG - Chr3:84929405-84929424 MsG0380016539.01.T01:intron 45.0%
TTGACAGGCCTGTGTAATAG+AGG - Chr3:84929968-84929987 MsG0380016539.01.T01:CDS 45.0%
TTGATGGGAAACGAGAAACC+CGG - Chr3:84928093-84928112 MsG0380016539.01.T01:intron 45.0%
! TGCCTTTAAGAAACCAGGTG+CGG + Chr3:84929531-84929550 None:intergenic 45.0%
!! AAACAAGGTGCGTTGACTGT+GGG - Chr3:84929240-84929259 MsG0380016539.01.T01:intron 45.0%
!! ACGCACCTTGTTTAACTTGG+TGG + Chr3:84929233-84929252 None:intergenic 45.0%
!! GGGTTAGCCATGAGTGAATT+GGG + Chr3:84928855-84928874 None:intergenic 45.0%
!! GTGCTGGTTTACTTCTTGGT+TGG - Chr3:84930745-84930764 MsG0380016539.01.T01:intron 45.0%
!! TAAACAAGGTGCGTTGACTG+TGG - Chr3:84929239-84929258 MsG0380016539.01.T01:intron 45.0%
!! TGGGTTAGCCATGAGTGAAT+TGG + Chr3:84928856-84928875 None:intergenic 45.0%
!!! ATGTGTCGTTGCTTTTGCAG+TGG - Chr3:84930707-84930726 MsG0380016539.01.T01:intron 45.0%
!!! TGTGTCGTTGCTTTTGCAGT+GGG - Chr3:84930708-84930727 MsG0380016539.01.T01:intron 45.0%
ACCCACCACAATCTACTTCC+TGG + Chr3:84931150-84931169 None:intergenic 50.0%
AGATGCATAACCAGCGGCAT+TGG + Chr3:84928307-84928326 None:intergenic 50.0%
ATCTTTGATCTGGCCGGAAC+TGG + Chr3:84930338-84930357 None:intergenic 50.0%
CTCATGGCTAACCCAGGATA+AGG - Chr3:84928861-84928880 MsG0380016539.01.T01:intron 50.0%
GAAGTAAACCAGCACCAGCA+AGG + Chr3:84930740-84930759 None:intergenic 50.0%
GACCAGGAAGTAGATTGTGG+TGG - Chr3:84931145-84931164 MsG0380016539.01.T01:five_prime_UTR 50.0%
GCAAGAAGCCTACAACGAGA+AGG - Chr3:84930471-84930490 MsG0380016539.01.T01:CDS 50.0%
GCCATGAGTGAATTGGGTCT+AGG + Chr3:84928849-84928868 None:intergenic 50.0%
GGAACCAAGCTCAATCTTGC+AGG + Chr3:84927770-84927789 None:intergenic 50.0%
GGATCCCACTTAATGGTGCA+TGG + Chr3:84928828-84928847 None:intergenic 50.0%
GGGGACAAAAATGGAGAAGG+AGG + Chr3:84929720-84929739 None:intergenic 50.0%
TCAGTAATGCTGCTGTTCCC+AGG + Chr3:84930394-84930413 None:intergenic 50.0%
TCCGGCCAGATCAAAGATTC+TGG - Chr3:84930340-84930359 MsG0380016539.01.T01:CDS 50.0%
TCTCGAGGAAGTGAACAGTC+AGG + Chr3:84931058-84931077 None:intergenic 50.0%
TGATGGGAAACGAGAAACCC+GGG - Chr3:84928094-84928113 MsG0380016539.01.T01:intron 50.0%
TGGTTCTTCACGTCCAGTTC+CGG - Chr3:84930322-84930341 MsG0380016539.01.T01:CDS 50.0%
TTCTTGGTTGGACCATGGGA+TGG - Chr3:84930757-84930776 MsG0380016539.01.T01:intron 50.0%
! AAGCACCGTCTCACGAACAA+TGG + Chr3:84928541-84928560 None:intergenic 50.0%
! AATGCCGCTGGTTATGCATC+TGG - Chr3:84928306-84928325 MsG0380016539.01.T01:intron 50.0%
! CAGTTGGCTAAGTGATGGGA+AGG + Chr3:84928755-84928774 None:intergenic 50.0%
! CCTTTAAGAAACCAGGTGCG+GGG + Chr3:84929529-84929548 None:intergenic 50.0%
! GCCTTTAAGAAACCAGGTGC+GGG + Chr3:84929530-84929549 None:intergenic 50.0%
! GGGTCTAGGATCCCACTTAA+TGG + Chr3:84928835-84928854 None:intergenic 50.0%
! TCAAGTTGCATTCGCCTGTG+TGG + Chr3:84930628-84930647 None:intergenic 50.0%
! TCTGGAACAACGCCTACTTC+TGG - Chr3:84928324-84928343 MsG0380016539.01.T01:intron 50.0%
!! AAGTAGATTGTGGTGGGTGC+AGG - Chr3:84931152-84931171 MsG0380016539.01.T01:five_prime_UTR 50.0%
!! CTCATGGGGGGATAATGGAA+TGG + Chr3:84929107-84929126 None:intergenic 50.0%
!! GCTGGTGCTGGTTTACTTCT+TGG - Chr3:84930741-84930760 MsG0380016539.01.T01:intron 50.0%
CCCCGCACCTGGTTTCTTAA+AGG - Chr3:84929526-84929545 MsG0380016539.01.T01:intron 55.0%
GGTTTAAGCCTTGCTGGTGC+TGG - Chr3:84930729-84930748 MsG0380016539.01.T01:intron 55.0%
! ACCAGCGGCATTGGAAGAAC+CGG + Chr3:84928298-84928317 None:intergenic 55.0%
! GCAGTGGGTTTAAGCCTTGC+TGG - Chr3:84930723-84930742 MsG0380016539.01.T01:intron 55.0%
AGAAACCAGGTGCGGGGACA+TGG + Chr3:84929523-84929542 None:intergenic 60.0%
GAAACGAGAAACCCGGGCCT+TGG - Chr3:84928100-84928119 MsG0380016539.01.T01:intron 60.0%
GCGGATTCAGTCTGCATGCC+CGG - Chr3:84927664-84927683 MsG0380016539.01.T01:CDS 60.0%
TTACCAGCAGTGCGCCACCA+AGG + Chr3:84928120-84928139 None:intergenic 60.0%
! ACCGGTTCTTCCAATGCCGC+TGG - Chr3:84928294-84928313 MsG0380016539.01.T01:intron 60.0%
ACGAGAAACCCGGGCCTTGG+TGG - Chr3:84928103-84928122 MsG0380016539.01.T01:intron 65.0%
CGGGGACATGGCCCGTTTCA+AGG + Chr3:84929511-84929530 None:intergenic 65.0%
AGCAGTGCGCCACCAAGGCC+CGG + Chr3:84928115-84928134 None:intergenic 70.0%
ACGGGCCATGTCCCCGCACC+TGG - Chr3:84929515-84929534 MsG0380016539.01.T01:intron 75.0%
GCAGTGCGCCACCAAGGCCC+GGG + Chr3:84928114-84928133 None:intergenic 75.0%
!! GGGCCTTGGTGGCGCACTGC+TGG - Chr3:84928114-84928133 MsG0380016539.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 84926892 84931232 84926892 ID=MsG0380016539.01;Name=MsG0380016539.01
Chr3 mRNA 84926892 84931232 84926892 ID=MsG0380016539.01.T01;Parent=MsG0380016539.01;Name=MsG0380016539.01.T01;_AED=0.39;_eAED=0.39;_QI=205|1|1|1|0.5|0.33|3|497|395
Chr3 exon 84926892 84927785 84926892 ID=MsG0380016539.01.T01:exon:14392;Parent=MsG0380016539.01.T01
Chr3 exon 84929745 84930602 84929745 ID=MsG0380016539.01.T01:exon:14391;Parent=MsG0380016539.01.T01
Chr3 exon 84931095 84931232 84931095 ID=MsG0380016539.01.T01:exon:14390;Parent=MsG0380016539.01.T01
Chr3 five_prime_UTR 84931095 84931232 84931095 ID=MsG0380016539.01.T01:five_prime_utr;Parent=MsG0380016539.01.T01
Chr3 five_prime_UTR 84930536 84930602 84930536 ID=MsG0380016539.01.T01:five_prime_utr;Parent=MsG0380016539.01.T01
Chr3 CDS 84929745 84930535 84929745 ID=MsG0380016539.01.T01:cds;Parent=MsG0380016539.01.T01
Chr3 CDS 84927389 84927785 84927389 ID=MsG0380016539.01.T01:cds;Parent=MsG0380016539.01.T01
Chr3 three_prime_UTR 84926892 84927388 84926892 ID=MsG0380016539.01.T01:three_prime_utr;Parent=MsG0380016539.01.T01
Gene Sequence

>MsG0380016539.01.T01

ATGGCAAATTTCCAGATTCCAAAAAAATTAGTATCTGATTGGAAACCTAGCAATTCAATTAATGATCAAATTCGGGCGGATTCAGTCTGCATGCCCGGTAATCGAAATTCTGATAAGCTACCAGATATGAAATGGTGGCTACATGTGAAAAGCAATTTGGATTGTGAACCAAATTATTCCTGCAAGATTGAGCTTGGTTCCTTCTATGCTGAATTTCTTGATGGAAATGTCAAGAATGGGGAAGATCAATCTATCATTGACTTTGATGATCTTTCTTATATTGGAAGTGATAATTTATCGGTTGATCAGCCACATCATGTCTCTCCTACTACATGTATGAAAAACAACAATAATGCAAGAATGCGAAAAATTGAGGCTTCATTGAACAATGATTTTCATTTTACTCCCAAGAAGAAAGATCAGAAGGACTTGGGATTTTCAGATGTTGGTTTTTTGGACTGTGATGTTTCCAATTTCTCGGTCTCAGAAAAAACGGCATCACATTTGATGGGAAACGAGAAACCCGGGCCTTGGTGGCGCACTGCTGGTAAAGATGAGTTGGCTTCCTTTGTTGCTCAGAGATCTGTTGAGCATGTTGAAAATTGTGATCTCCCTCATCCTCAGCCTAAGCATTTTGATCAGAGATTCTCAAAGGGTGTTGATACTGATAAGATTCTACCATCATCTTTAAGCCAGAAAACTGAAACCGGTTCTTCCAATGCCGCTGGTTATGCATCTGGAACAACGCCTACTTCTGGCTGTTCTTTTCAGGATTCAAACAGTCATTTCAGTTCCGGCCAGATCAAAGATTCTGGTTTAAGCAACCAAGATTCTCAAATAAATCCTGGGAACAGCAGCATTACTGAGCTGTTAGAAGCACTGTGTCATTCTCAAACAAGAGCAAGAGAGGCTGAGAAAGCAGCGCAAGAAGCCTACAACGAGAAGGAGCATATCATGAGTCTTTTCTTTAAACAGGCTTCTCAACTCTTTGCATACAAACAGTGGTACTACATGCTGCAGCTCGAGAACCTCTGCCTTCAACTTAGAAACAAAAACAAACCATTGCTAAATCTCTTTCCACACAGGCGAATGCAACTTGAGAAAAATCGCAACAGAGCTGAAAAGAGAAGATCAATAACAAAAAATGTGGGATTGGAAAATGTGTCGTTGCTTTTGCAGTGGGTTTAA
Protein sequence

>MsG0380016539.01.T01

MANFQIPKKLVSDWKPSNSINDQIRADSVCMPGNRNSDKLPDMKWWLHVKSNLDCEPNYSCKIELGSFYAEFLDGNVKNGEDQSIIDFDDLSYIGSDNLSVDQPHHVSPTTCMKNNNNARMRKIEASLNNDFHFTPKKKDQKDLGFSDVGFLDCDVSNFSVSEKTASHLMGNEKPGPWWRTAGKDELASFVAQRSVEHVENCDLPHPQPKHFDQRFSKGVDTDKILPSSLSQKTETGSSNAAGYASGTTPTSGCSFQDSNSHFSSGQIKDSGLSNQDSQINPGNSSITELLEALCHSQTRAREAEKAAQEAYNEKEHIMSLFFKQASQLFAYKQWYYMLQLENLCLQLRNKNKPLLNLFPHRRMQLEKNRNRAEKRRSITKNVGLENVSLLLQWV*