Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000597.01.T01 | AES59028.2 | 91.048 | 525 | 29 | 1 | 1 | 507 | 1 | 525 | 0 | 972 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000597.01.T01 | Q9FY48 | 32.014 | 278 | 156 | 9 | 54 | 302 | 137 | 410 | 2.66E-31 | 132 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000597.01.T01 | G7I717 | 91.048 | 525 | 29 | 1 | 1 | 507 | 1 | 525 | 0.0 | 972 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000597.01 | MsG0180003574.01 | 0.805080 | 1.586313e-49 | 8.315661e-47 |
MsG0180000597.01 | MsG0180003673.01 | 0.812160 | 4.876446e-51 | 3.077384e-48 |
MsG0180000597.01 | MsG0180003686.01 | 0.811309 | 7.465699e-51 | 4.605389e-48 |
MsG0180000597.01 | MsG0180004462.01 | 0.823846 | 1.111632e-53 | 9.683033e-51 |
MsG0180000597.01 | MsG0180004464.01 | 0.835228 | 1.896247e-56 | 2.304487e-53 |
MsG0180000597.01 | MsG0280007023.01 | 0.808238 | 3.415814e-50 | 1.942928e-47 |
MsG0180000597.01 | MsG0280007072.01 | 0.803711 | 3.059708e-49 | 1.548328e-46 |
MsG0180000597.01 | MsG0280009024.01 | 0.808141 | 3.583801e-50 | 2.033208e-47 |
MsG0180000597.01 | MsG0380014573.01 | 0.812172 | 4.845696e-51 | 3.058977e-48 |
MsG0180000597.01 | MsG0380016539.01 | 0.836349 | 9.860268e-57 | 1.239395e-53 |
MsG0180000597.01 | MsG0380017048.01 | 0.830436 | 2.940800e-55 | 3.098083e-52 |
MsG0180000597.01 | MsG0380017092.01 | 0.801047 | 1.082370e-48 | 5.118655e-46 |
MsG0180000597.01 | MsG0480018318.01 | 0.816053 | 6.743825e-52 | 4.728761e-49 |
MsG0180000597.01 | MsG0480019574.01 | 0.806789 | 6.934869e-50 | 3.798037e-47 |
MsG0180000597.01 | MsG0580024038.01 | 0.820128 | 8.077663e-53 | 6.337462e-50 |
MsG0180000597.01 | MsG0580025758.01 | 0.834682 | 2.601944e-56 | 3.110063e-53 |
MsG0180000597.01 | MsG0680032957.01 | 0.813628 | 2.324675e-51 | 1.525962e-48 |
MsG0180000597.01 | MsG0780039144.01 | 0.803400 | 3.549711e-49 | 1.782113e-46 |
MsG0180000597.01 | MsG0780040177.01 | 0.806225 | 9.121276e-50 | 4.924237e-47 |
MsG0180000597.01 | MsG0780041242.01 | 0.815820 | 7.600546e-52 | 5.295198e-49 |
MsG0180000597.01 | MsG0880043144.01 | 0.804737 | 1.870975e-49 | 9.722372e-47 |
MsG0180000597.01 | MsG0880046531.01 | 0.816593 | 5.105610e-52 | 3.633067e-49 |
MsG0180000597.01 | MsG0880046995.01 | 0.808624 | 2.826110e-50 | 1.623684e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000597.01.T01 | MTR_1g012610 | 91.048 | 525 | 29 | 1 | 1 | 507 | 1 | 525 | 0.0 | 972 |
MsG0180000597.01.T01 | MTR_1g012610 | 90.927 | 518 | 29 | 1 | 8 | 507 | 9 | 526 | 0.0 | 961 |
MsG0180000597.01.T01 | MTR_1g012610 | 91.085 | 516 | 28 | 1 | 10 | 507 | 1 | 516 | 0.0 | 957 |
MsG0180000597.01.T01 | MTR_3g014090 | 31.295 | 278 | 159 | 6 | 52 | 302 | 141 | 413 | 7.87e-32 | 130 |
MsG0180000597.01.T01 | MTR_3g014090 | 31.295 | 278 | 159 | 6 | 52 | 302 | 139 | 411 | 7.89e-32 | 130 |
MsG0180000597.01.T01 | MTR_0137s0080 | 31.250 | 288 | 163 | 7 | 45 | 302 | 131 | 413 | 1.16e-31 | 129 |
MsG0180000597.01.T01 | MTR_5g023150 | 27.106 | 273 | 175 | 10 | 35 | 302 | 178 | 431 | 1.50e-18 | 88.6 |
MsG0180000597.01.T01 | MTR_5g023150 | 27.106 | 273 | 175 | 10 | 35 | 302 | 275 | 528 | 1.84e-18 | 89.0 |
MsG0180000597.01.T01 | MTR_4g088745 | 31.034 | 174 | 111 | 4 | 133 | 305 | 121 | 286 | 3.88e-16 | 80.5 |
MsG0180000597.01.T01 | MTR_4g088755 | 31.034 | 174 | 111 | 4 | 133 | 305 | 116 | 281 | 4.18e-16 | 80.1 |
MsG0180000597.01.T01 | MTR_5g066490 | 25.455 | 275 | 183 | 8 | 33 | 300 | 623 | 882 | 1.94e-15 | 80.1 |
MsG0180000597.01.T01 | MTR_4g088750 | 29.885 | 174 | 113 | 4 | 133 | 305 | 277 | 442 | 1.26e-14 | 76.6 |
MsG0180000597.01.T01 | MTR_3g100090 | 25.455 | 275 | 183 | 8 | 33 | 300 | 630 | 889 | 2.85e-14 | 76.3 |
MsG0180000597.01.T01 | MTR_2g020380 | 35.766 | 137 | 83 | 4 | 144 | 277 | 81 | 215 | 3.91e-14 | 75.9 |
MsG0180000597.01.T01 | MTR_1g113960 | 25.243 | 309 | 188 | 13 | 39 | 327 | 285 | 570 | 4.14e-14 | 75.1 |
MsG0180000597.01.T01 | MTR_2g013900 | 29.586 | 169 | 111 | 3 | 133 | 300 | 238 | 399 | 5.18e-14 | 74.7 |
MsG0180000597.01.T01 | MTR_1g113960 | 26.172 | 256 | 163 | 11 | 39 | 288 | 285 | 520 | 6.87e-14 | 74.7 |
MsG0180000597.01.T01 | MTR_3g101210 | 26.295 | 251 | 164 | 7 | 60 | 302 | 313 | 550 | 1.41e-13 | 73.6 |
MsG0180000597.01.T01 | MTR_3g101210 | 26.295 | 251 | 164 | 7 | 60 | 302 | 313 | 550 | 1.44e-13 | 73.9 |
MsG0180000597.01.T01 | MTR_4g049730 | 29.861 | 144 | 88 | 5 | 160 | 301 | 98 | 230 | 9.67e-13 | 70.5 |
MsG0180000597.01.T01 | MTR_4g106980 | 23.053 | 321 | 209 | 10 | 10 | 303 | 39 | 348 | 3.45e-12 | 68.6 |
MsG0180000597.01.T01 | MTR_4g132860 | 25.581 | 172 | 120 | 3 | 133 | 303 | 155 | 319 | 1.50e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000597.01.T01 | AT4G32250 | 60.437 | 503 | 174 | 7 | 24 | 507 | 14 | 510 | 0.0 | 595 |
MsG0180000597.01.T01 | AT4G32250 | 60.437 | 503 | 174 | 7 | 24 | 507 | 14 | 510 | 0.0 | 595 |
MsG0180000597.01.T01 | AT4G32250 | 60.437 | 503 | 174 | 7 | 24 | 507 | 14 | 510 | 0.0 | 595 |
MsG0180000597.01.T01 | AT5G13530 | 32.014 | 278 | 156 | 9 | 54 | 302 | 137 | 410 | 2.68e-32 | 132 |
MsG0180000597.01.T01 | AT5G13530 | 32.014 | 278 | 156 | 9 | 54 | 302 | 137 | 410 | 2.71e-32 | 132 |
MsG0180000597.01.T01 | AT4G24480 | 26.490 | 302 | 184 | 9 | 22 | 300 | 624 | 910 | 5.99e-17 | 84.7 |
MsG0180000597.01.T01 | AT4G24480 | 26.510 | 298 | 184 | 9 | 22 | 300 | 624 | 905 | 4.37e-16 | 82.0 |
MsG0180000597.01.T01 | AT4G24480 | 26.510 | 298 | 184 | 9 | 22 | 300 | 624 | 905 | 4.42e-16 | 82.0 |
MsG0180000597.01.T01 | AT1G05100 | 33.333 | 168 | 95 | 7 | 141 | 302 | 89 | 245 | 1.06e-15 | 79.0 |
MsG0180000597.01.T01 | AT4G38470 | 25.175 | 286 | 190 | 10 | 22 | 302 | 257 | 523 | 8.95e-15 | 77.4 |
MsG0180000597.01.T01 | AT4G38470 | 25.175 | 286 | 190 | 10 | 22 | 302 | 257 | 523 | 9.63e-15 | 77.4 |
MsG0180000597.01.T01 | AT4G38470 | 25.856 | 263 | 171 | 10 | 22 | 279 | 257 | 500 | 2.40e-14 | 75.9 |
MsG0180000597.01.T01 | AT3G63260 | 26.286 | 175 | 121 | 3 | 130 | 302 | 178 | 346 | 1.09e-13 | 73.2 |
MsG0180000597.01.T01 | AT4G26890 | 32.061 | 131 | 78 | 2 | 134 | 264 | 77 | 196 | 3.96e-13 | 71.6 |
MsG0180000597.01.T01 | AT3G45790 | 28.326 | 233 | 145 | 6 | 42 | 264 | 90 | 310 | 1.69e-12 | 69.3 |
MsG0180000597.01.T01 | AT3G46140 | 27.897 | 233 | 146 | 6 | 42 | 264 | 90 | 310 | 5.93e-12 | 67.8 |
MsG0180000597.01.T01 | AT3G46930 | 27.168 | 173 | 117 | 4 | 133 | 303 | 275 | 440 | 9.04e-12 | 67.8 |
MsG0180000597.01.T01 | AT3G46930 | 27.168 | 173 | 117 | 4 | 133 | 303 | 240 | 405 | 1.03e-11 | 67.4 |
MsG0180000597.01.T01 | AT1G62400 | 26.036 | 169 | 117 | 3 | 133 | 300 | 161 | 322 | 2.38e-11 | 65.9 |
MsG0180000597.01.T01 | AT2G19190 | 25.468 | 267 | 166 | 9 | 56 | 315 | 576 | 816 | 2.65e-11 | 66.6 |
MsG0180000597.01.T01 | AT2G42640 | 28.221 | 163 | 106 | 5 | 138 | 300 | 567 | 718 | 4.24e-11 | 65.9 |
MsG0180000597.01.T01 | AT1G08720 | 25.573 | 262 | 170 | 8 | 47 | 303 | 665 | 906 | 5.01e-11 | 65.9 |
MsG0180000597.01.T01 | AT2G42640 | 28.221 | 163 | 106 | 5 | 138 | 300 | 605 | 756 | 5.74e-11 | 65.5 |
MsG0180000597.01.T01 | AT1G08720 | 25.573 | 262 | 170 | 8 | 47 | 303 | 665 | 906 | 6.40e-11 | 65.5 |
Find 206 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATGAGTTGGGAGGCTTTC+TGG | 0.085084 | 1:+8442897 | None:intergenic |
TGACAACGATCAAGCGATTT+TGG | 0.146585 | 1:-8443916 | MsG0180000597.01.T01:CDS |
GATTCGAATGGCGTCGTAAA+AGG | 0.159414 | 1:-8442516 | MsG0180000597.01.T01:CDS |
GGTTGAGTGTTAAGTTTATT+TGG | 0.163491 | 1:-8445050 | MsG0180000597.01.T01:five_prime_UTR |
GAAGAACATTACATGGTTTA+AGG | 0.171246 | 1:+8443943 | None:intergenic |
AGAGCTTCTGTTGGATTTAT+TGG | 0.180068 | 1:-8442640 | MsG0180000597.01.T01:CDS |
GAAGTTGTAAATATCCTTTA+AGG | 0.191080 | 1:-8441908 | MsG0180000597.01.T01:three_prime_UTR |
ACCTCTGGTTTCCATTGTTC+TGG | 0.192206 | 1:+8443804 | None:intergenic |
CATGGAATTTCAATGTTAAA+TGG | 0.209362 | 1:-8444315 | MsG0180000597.01.T01:CDS |
TAAGTCAATGAAGATGTATT+TGG | 0.232759 | 1:-8444893 | MsG0180000597.01.T01:five_prime_UTR |
GTTGAGTGTTAAGTTTATTT+GGG | 0.240390 | 1:-8445049 | MsG0180000597.01.T01:five_prime_UTR |
GTTAAGCACCATCTTTAAAA+AGG | 0.241242 | 1:+8442102 | None:intergenic |
TGAATAACATTAGTTGAAAA+TGG | 0.243158 | 1:-8441975 | MsG0180000597.01.T01:three_prime_UTR |
TGTTCTGGAGCCATGTAATT+AGG | 0.250797 | 1:+8443819 | None:intergenic |
TATACAGAGCTAATCCTTAA+AGG | 0.261392 | 1:+8441894 | None:intergenic |
GAGCTTCTGTTGGATTTATT+GGG | 0.274049 | 1:-8442639 | MsG0180000597.01.T01:CDS |
TGCTGAAGTTTCAAAGGTTC+AGG | 0.298858 | 1:+8444531 | None:intergenic |
TTAGAACGTACTGCAGATTA+TGG | 0.302417 | 1:-8442832 | MsG0180000597.01.T01:CDS |
TCTAGACATTCCTGAATCTA+AGG | 0.302873 | 1:+8444668 | None:intergenic |
GGGCTTAACACATTCTCTTT+TGG | 0.303938 | 1:+8442541 | None:intergenic |
TTTCCAGGGATGGTGAGTTT+TGG | 0.309534 | 1:-8442431 | MsG0180000597.01.T01:exon |
CCGAGGGATGGGTGACCTCC+TGG | 0.311465 | 1:-8445300 | MsG0180000597.01.T01:five_prime_UTR |
GTCGATGTATGAATTCTTAT+AGG | 0.311891 | 1:+8442775 | None:intergenic |
TGTTTGGTTGTCAAGTTTCC+AGG | 0.313479 | 1:-8442446 | MsG0180000597.01.T01:CDS |
TAGTCAGTGCTGCCTGATTT+TGG | 0.315215 | 1:+8442973 | None:intergenic |
TTCACATGATCCTCTTTGAT+TGG | 0.322968 | 1:+8444405 | None:intergenic |
TCTGCGTGGGCCAGTTTGTT+AGG | 0.324940 | 1:-8442564 | MsG0180000597.01.T01:CDS |
TTTACTTGATATCACTTCAT+AGG | 0.337285 | 1:-8445098 | MsG0180000597.01.T01:five_prime_UTR |
AGTATTACAACCTTAGATTC+AGG | 0.360396 | 1:-8444678 | MsG0180000597.01.T01:CDS |
GAGGACCCTTTGGTGATGTT+TGG | 0.361104 | 1:-8444497 | MsG0180000597.01.T01:CDS |
CCATGGGTTATAATCCTTGT+AGG | 0.362031 | 1:+8442161 | None:intergenic |
TTCTAGAGCTTCACGCTAAA+GGG | 0.362481 | 1:-8443980 | MsG0180000597.01.T01:CDS |
AAGGAGTTTCTAGTGTTTGC+TGG | 0.368878 | 1:-8444341 | MsG0180000597.01.T01:CDS |
ACATCTTAGCAGCAACTTCA+TGG | 0.384443 | 1:+8444433 | None:intergenic |
TTGAAACTTCAGCACCGAAT+TGG | 0.395091 | 1:-8444522 | MsG0180000597.01.T01:CDS |
GAAACGGATTCATGGGGATT+CGG | 0.395952 | 1:-8443762 | MsG0180000597.01.T01:CDS |
ATTCGAATGGCGTCGTAAAA+GGG | 0.398237 | 1:-8442515 | MsG0180000597.01.T01:CDS |
CCTCTCAAAGGATCAACTTC+AGG | 0.398972 | 1:-8442938 | MsG0180000597.01.T01:CDS |
TTGAAACTAGGCATATTAGT+TGG | 0.401044 | 1:-8442260 | MsG0180000597.01.T01:three_prime_UTR |
TCGATGTATGAATTCTTATA+GGG | 0.403661 | 1:+8442776 | None:intergenic |
CGAATTGGTCGAGGACCCTT+TGG | 0.406343 | 1:-8444507 | MsG0180000597.01.T01:CDS |
TCTGCTACTGGTAGGATTCA+TGG | 0.407717 | 1:-8442484 | MsG0180000597.01.T01:CDS |
TCTACCGTCATTGCGATTGA+TGG | 0.408374 | 1:+8442660 | None:intergenic |
ATATTTACAGCTTTGAAACT+AGG | 0.412019 | 1:-8442272 | MsG0180000597.01.T01:three_prime_UTR |
TGAAGAGCCAAGCAAAAGAT+TGG | 0.413672 | 1:+8443878 | None:intergenic |
ATGAAAGTAATTCCAAAATC+AGG | 0.416519 | 1:-8442985 | MsG0180000597.01.T01:CDS |
ATGGCCTGGCAGCTGGTGAT+TGG | 0.421439 | 1:-8442735 | MsG0180000597.01.T01:CDS |
TTATTGGGCTGCAAACTCTC+TGG | 0.426673 | 1:-8442624 | MsG0180000597.01.T01:CDS |
AGGGGAGGGGCCTCTGCTAC+TGG | 0.429138 | 1:-8442496 | MsG0180000597.01.T01:CDS |
TTGACAACCAAACACCCATT+TGG | 0.430784 | 1:+8442455 | None:intergenic |
ATGCCTAGTACAACTAGAAC+AGG | 0.431258 | 1:+8442293 | None:intergenic |
AATCCATGGACTTGCGCGAT+TGG | 0.432685 | 1:+8444557 | None:intergenic |
TGTCATTTGAAACGGATTCA+TGG | 0.434134 | 1:-8443770 | MsG0180000597.01.T01:CDS |
GGAGGAGGATGGAGATATCA+AGG | 0.438936 | 1:-8443012 | MsG0180000597.01.T01:CDS |
AAGCGTGTTTGGCCGAGGGA+TGG | 0.443512 | 1:-8445312 | None:intergenic |
TGTCCTGTTGGTGAAATATA+CGG | 0.443667 | 1:-8443693 | MsG0180000597.01.T01:CDS |
GATACTACCAAATGGGTGTT+TGG | 0.448805 | 1:-8442462 | MsG0180000597.01.T01:CDS |
TTCCCAAAACTCACCATCCC+TGG | 0.449001 | 1:+8442428 | None:intergenic |
GTCATTTGAAACGGATTCAT+GGG | 0.449610 | 1:-8443769 | MsG0180000597.01.T01:CDS |
ATTCTAGAGCTTCACGCTAA+AGG | 0.452406 | 1:-8443981 | MsG0180000597.01.T01:CDS |
GTCACGAATGGCCTGGCAGC+TGG | 0.457715 | 1:-8442742 | MsG0180000597.01.T01:CDS |
TCTAGTGTTTGCTGGTTACA+TGG | 0.459137 | 1:-8444333 | MsG0180000597.01.T01:CDS |
GAAAGTACAGCTGATAGAAT+TGG | 0.460485 | 1:+8442013 | None:intergenic |
TCTCCCATTGAGAATATCCT+TGG | 0.462519 | 1:-8443621 | MsG0180000597.01.T01:CDS |
CAAAGGGTCCTCGACCAATT+CGG | 0.467685 | 1:+8444508 | None:intergenic |
GATTCATGGATACTACCAAA+TGG | 0.474128 | 1:-8442470 | MsG0180000597.01.T01:CDS |
CGAGGGATGGGTGACCTCCT+GGG | 0.475664 | 1:-8445299 | MsG0180000597.01.T01:five_prime_UTR |
AGTGTTAAGTTTATTTGGGG+TGG | 0.477588 | 1:-8445045 | MsG0180000597.01.T01:five_prime_UTR |
GACATAGGGCCTCTGACCTC+TGG | 0.481700 | 1:+8443789 | None:intergenic |
GGTTGTCAAGTTTCCAGGGA+TGG | 0.483297 | 1:-8442441 | MsG0180000597.01.T01:CDS |
GTCTTTCGGGATTGTAAACA+TGG | 0.483744 | 1:-8445194 | MsG0180000597.01.T01:five_prime_UTR |
AAAGGTTCAGGTTCAATCCA+TGG | 0.486677 | 1:+8444543 | None:intergenic |
TCATTAGCTAGTGTTTGAAC+TGG | 0.490555 | 1:-8442040 | MsG0180000597.01.T01:three_prime_UTR |
AGTTGGGAGGCTTTCTGGAT+CGG | 0.491406 | 1:+8442902 | None:intergenic |
AGCGTGTTTGGCCGAGGGAT+GGG | 0.492465 | 1:-8445311 | None:intergenic |
AAGCCAACGACAGTTCCGTC+TGG | 0.492923 | 1:+8442853 | None:intergenic |
AGGCCCTATGTCATTTGAAA+CGG | 0.494592 | 1:-8443778 | MsG0180000597.01.T01:CDS |
GAAGAGCCAAGCAAAAGATT+GGG | 0.495194 | 1:+8443879 | None:intergenic |
AAACCCTTCAGAACTCGAAA+TGG | 0.495513 | 1:-8442596 | MsG0180000597.01.T01:CDS |
AAATTGTATGACGGTTCAAT+TGG | 0.497991 | 1:-8444179 | MsG0180000597.01.T01:CDS |
CTGAATGAACTGGCTAATGA+TGG | 0.498348 | 1:-8443033 | MsG0180000597.01.T01:CDS |
GGTACGCTTGAAAGATGAAA+AGG | 0.498765 | 1:-8442713 | MsG0180000597.01.T01:CDS |
AGACCTGTTCTAGTTGTACT+AGG | 0.500576 | 1:-8442296 | MsG0180000597.01.T01:three_prime_UTR |
TAACCCATGGCAACACAACA+TGG | 0.500752 | 1:-8442148 | MsG0180000597.01.T01:three_prime_UTR |
CGACCAATCGCGCAAGTCCA+TGG | 0.502376 | 1:-8444560 | MsG0180000597.01.T01:CDS |
GATCCGTATATTTCACCAAC+AGG | 0.502608 | 1:+8443690 | None:intergenic |
GAGGGGCCTCTGCTACTGGT+AGG | 0.503223 | 1:-8442492 | MsG0180000597.01.T01:CDS |
TGGCCTGGCAGCTGGTGATT+GGG | 0.503490 | 1:-8442734 | MsG0180000597.01.T01:CDS |
ACGTTATTAACATTGAGCTT+AGG | 0.503963 | 1:+8444748 | None:intergenic |
ATGGGAGAAGGAAGGCCACT+TGG | 0.504464 | 1:+8443636 | None:intergenic |
AACTTCAACCTCGGAAGGAT+CGG | 0.506263 | 1:+8442388 | None:intergenic |
TGCACCAAGGATATTCTCAA+TGG | 0.506987 | 1:+8443617 | None:intergenic |
GAATTTCAATGTTAAATGGA+AGG | 0.512178 | 1:-8444311 | MsG0180000597.01.T01:CDS |
CTCAAAGGATCAACTTCAGG+TGG | 0.513886 | 1:-8442935 | MsG0180000597.01.T01:CDS |
TTATGGATTTGTTCTAGTGA+GGG | 0.514209 | 1:-8442815 | MsG0180000597.01.T01:CDS |
TCAGATATTGCTCAGAGGCT+TGG | 0.514336 | 1:-8443846 | MsG0180000597.01.T01:CDS |
GTTTGGTTGTCAAGTTTCCA+GGG | 0.514420 | 1:-8442445 | MsG0180000597.01.T01:CDS |
CAGAAAATTTCAAAGATCAC+AGG | 0.514716 | 1:+8444713 | None:intergenic |
CCAGGAGGTCACCCATCCCT+CGG | 0.515557 | 1:+8445300 | None:intergenic |
ATTGTAAACATGGGTATCAA+TGG | 0.516132 | 1:-8445184 | MsG0180000597.01.T01:five_prime_UTR |
ACACATCACCTCAAAACATC+AGG | 0.516904 | 1:+8444116 | None:intergenic |
CATGGACTTGCGCGATTGGT+CGG | 0.519277 | 1:+8444561 | None:intergenic |
ATGGTTTAAGGTTGAGAACA+AGG | 0.524109 | 1:+8443955 | None:intergenic |
AATTTCAATGTTAAATGGAA+GGG | 0.525630 | 1:-8444310 | MsG0180000597.01.T01:intron |
TTGCAGGTCACTGAATGAAC+TGG | 0.528545 | 1:-8443043 | MsG0180000597.01.T01:intron |
TCTGCCATTTCGAGTTCTGA+AGG | 0.531466 | 1:+8442592 | None:intergenic |
GTACCCAATCACCAGCTGCC+AGG | 0.532200 | 1:+8442731 | None:intergenic |
ATTCATGGATACTACCAAAT+GGG | 0.532985 | 1:-8442469 | MsG0180000597.01.T01:CDS |
AGCAAACACTAGAAACTCCT+TGG | 0.533146 | 1:+8444343 | None:intergenic |
TGAACGCGTCACGAATGGCC+TGG | 0.537908 | 1:-8442749 | MsG0180000597.01.T01:CDS |
CACCGAGTGGTTCCTCTCAA+AGG | 0.541938 | 1:-8442950 | MsG0180000597.01.T01:CDS |
CCTTGGTATGGATGTCCTGT+TGG | 0.543914 | 1:-8443705 | MsG0180000597.01.T01:CDS |
ATTATGGATTTGTTCTAGTG+AGG | 0.545782 | 1:-8442816 | MsG0180000597.01.T01:CDS |
TGGCAGGTATGGGATCGATC+TGG | 0.548820 | 1:-8444012 | MsG0180000597.01.T01:intron |
ATTCGGTGCTGAAGTTTCAA+AGG | 0.549441 | 1:+8444525 | None:intergenic |
TACGACGCCATTCGAATCGA+GGG | 0.550381 | 1:+8442521 | None:intergenic |
GAATCCGTTTCAAATGACAT+AGG | 0.550959 | 1:+8443774 | None:intergenic |
TCATTGAGAAGAACATTACA+TGG | 0.551201 | 1:+8443936 | None:intergenic |
GCACCAAGGATATTCTCAAT+GGG | 0.552742 | 1:+8443618 | None:intergenic |
TTCGAATGGCGTCGTAAAAG+GGG | 0.556323 | 1:-8442514 | MsG0180000597.01.T01:CDS |
TAGTTGGAAACAAAGTGAAA+AGG | 0.558036 | 1:-8442244 | MsG0180000597.01.T01:three_prime_UTR |
AACATGTTGAGGATCATCAC+TGG | 0.559885 | 1:-8442325 | MsG0180000597.01.T01:three_prime_UTR |
AAAATCAACAACTTCAACCT+CGG | 0.561609 | 1:+8442379 | None:intergenic |
ACTGGTAGTCAACCTTGGTA+TGG | 0.562801 | 1:-8443717 | MsG0180000597.01.T01:CDS |
AAAAGGATATTAGCAACTGA+AGG | 0.563136 | 1:+8442119 | None:intergenic |
TGAGATTTGCATGAGTTGGG+AGG | 0.563242 | 1:+8442889 | None:intergenic |
TTGAGTGTTAAGTTTATTTG+GGG | 0.563417 | 1:-8445048 | MsG0180000597.01.T01:five_prime_UTR |
AACCCATGGCAACACAACAT+GGG | 0.563805 | 1:-8442147 | MsG0180000597.01.T01:three_prime_UTR |
CTGCCATTTCGAGTTCTGAA+GGG | 0.564065 | 1:+8442593 | None:intergenic |
AGCCAACGACAGTTCCGTCT+GGG | 0.566135 | 1:+8442854 | None:intergenic |
GGGCTGCAAACTCTCTGGAA+TGG | 0.566139 | 1:-8442619 | MsG0180000597.01.T01:CDS |
ACTCTTGAACGCGTCACGAA+TGG | 0.567776 | 1:-8442754 | MsG0180000597.01.T01:CDS |
AGGAATGTCTAGAGAAGTCA+TGG | 0.568023 | 1:-8444658 | MsG0180000597.01.T01:CDS |
GTGCAACACAAGGACTTCCC+AGG | 0.568792 | 1:+8445282 | None:intergenic |
GTATTTACATATTTATTCCG+AGG | 0.570546 | 1:-8444980 | MsG0180000597.01.T01:five_prime_UTR |
GTCAAAACAACAGTCCTACA+AGG | 0.572453 | 1:-8442175 | MsG0180000597.01.T01:three_prime_UTR |
TGGCTAATGATGGAGGAGGA+TGG | 0.574319 | 1:-8443023 | MsG0180000597.01.T01:CDS |
ACCCATGGCAACACAACATG+GGG | 0.575393 | 1:-8442146 | MsG0180000597.01.T01:three_prime_UTR |
ATTACATGGCTCCAGAACAA+TGG | 0.575533 | 1:-8443815 | MsG0180000597.01.T01:CDS |
TCAACTTCAGGTGGGTGACA+TGG | 0.577067 | 1:-8442926 | MsG0180000597.01.T01:CDS |
AGAAAAGTATCAACATGTTG+AGG | 0.578832 | 1:-8442336 | MsG0180000597.01.T01:three_prime_UTR |
TGCAAGCCAAACATCACCAA+AGG | 0.581260 | 1:+8444491 | None:intergenic |
AGGATATTCTCAATGGGAGA+AGG | 0.581766 | 1:+8443624 | None:intergenic |
TTTGTTCTAGTGAGGGTCCA+CGG | 0.582005 | 1:-8442808 | MsG0180000597.01.T01:CDS |
TGGGAATGAATCAAACACCT+TGG | 0.582420 | 1:-8442411 | MsG0180000597.01.T01:three_prime_UTR |
TCAACAACTTCAACCTCGGA+AGG | 0.582617 | 1:+8442383 | None:intergenic |
CATTCCATCAATCGCAATGA+CGG | 0.585990 | 1:-8442664 | MsG0180000597.01.T01:CDS |
TGGGAGAAGGAAGGCCACTT+GGG | 0.586231 | 1:+8443637 | None:intergenic |
CGGTTCAATTGGTGACAAGT+TGG | 0.586939 | 1:-8444168 | MsG0180000597.01.T01:CDS |
AATCCGTTTCAAATGACATA+GGG | 0.587008 | 1:+8443775 | None:intergenic |
TTGTTGTTGCTCAGACAACA+AGG | 0.587800 | 1:-8444869 | MsG0180000597.01.T01:five_prime_UTR |
AAGGAAAAGCACTCACCGGT+GGG | 0.588053 | 1:-8442694 | MsG0180000597.01.T01:CDS |
ACAAAGTGAAAAGGTGCAAG+AGG | 0.591652 | 1:-8442235 | MsG0180000597.01.T01:three_prime_UTR |
CACCTTGGCCGATCCTTCCG+AGG | 0.592446 | 1:-8442396 | MsG0180000597.01.T01:three_prime_UTR |
AACCTCGGAAGGATCGGCCA+AGG | 0.594129 | 1:+8442394 | None:intergenic |
TGGCTAGACTAAGAGATGGA+TGG | 0.594983 | 1:-8444148 | MsG0180000597.01.T01:CDS |
GATGTTACATCCAATCAAAG+AGG | 0.595757 | 1:-8444415 | MsG0180000597.01.T01:CDS |
TTACGACGCCATTCGAATCG+AGG | 0.595769 | 1:+8442520 | None:intergenic |
GCAAGCCAAACATCACCAAA+GGG | 0.597883 | 1:+8444492 | None:intergenic |
TATGGGATCGATCTGGCTCA+AGG | 0.601763 | 1:-8444005 | MsG0180000597.01.T01:CDS |
GAATTATGCTTGAAGTGCCA+AGG | 0.602260 | 1:-8444360 | MsG0180000597.01.T01:CDS |
CTTCAGCACCGAATTGGTCG+AGG | 0.602330 | 1:-8444516 | MsG0180000597.01.T01:CDS |
GCTTGGAAGTCCTAATTACA+TGG | 0.604254 | 1:-8443829 | MsG0180000597.01.T01:CDS |
ATCATTATGAAATTGTATGA+CGG | 0.604681 | 1:-8444188 | MsG0180000597.01.T01:CDS |
TGTTGACTGGTAGTCAACCT+TGG | 0.606529 | 1:-8443722 | MsG0180000597.01.T01:CDS |
ACCGTTGTTGAAATGTTGAC+TGG | 0.606786 | 1:-8443735 | MsG0180000597.01.T01:CDS |
CCTGAAGTTGATCCTTTGAG+AGG | 0.610469 | 1:+8442938 | None:intergenic |
AATGGCGTCGTAAAAGGGGA+GGG | 0.612881 | 1:-8442510 | MsG0180000597.01.T01:CDS |
GTCCCAGACGGAACTGTCGT+TGG | 0.613432 | 1:-8442856 | MsG0180000597.01.T01:CDS |
TGTTAAGCCCTCGATTCGAA+TGG | 0.618387 | 1:-8442528 | MsG0180000597.01.T01:CDS |
TCATTTGAAACGGATTCATG+GGG | 0.622874 | 1:-8443768 | MsG0180000597.01.T01:CDS |
TGAAAAGGAAAAGCACTCAC+CGG | 0.625000 | 1:-8442698 | MsG0180000597.01.T01:CDS |
ATGGCAGAATCATTCTGCGT+GGG | 0.627438 | 1:-8442577 | MsG0180000597.01.T01:CDS |
AAGTTGGCTAGACTAAGAGA+TGG | 0.628842 | 1:-8444152 | MsG0180000597.01.T01:CDS |
ATGAATCCTACCAGTAGCAG+AGG | 0.629390 | 1:+8442486 | None:intergenic |
AAAGGAAAAGCACTCACCGG+TGG | 0.630780 | 1:-8442695 | MsG0180000597.01.T01:CDS |
ATCCTTTGAGAGGAACCACT+CGG | 0.632608 | 1:+8442948 | None:intergenic |
ATGGCGTCGTAAAAGGGGAG+GGG | 0.637421 | 1:-8442509 | MsG0180000597.01.T01:CDS |
GAATGGCGTCGTAAAAGGGG+AGG | 0.641779 | 1:-8442511 | MsG0180000597.01.T01:CDS |
TATTCTCAATGGGAGAAGGA+AGG | 0.642358 | 1:+8443628 | None:intergenic |
AATGACGGTAGAGCTTCTGT+TGG | 0.643785 | 1:-8442649 | MsG0180000597.01.T01:CDS |
CAATGGAAACCAGAGGTCAG+AGG | 0.644185 | 1:-8443798 | MsG0180000597.01.T01:CDS |
ACATGTTGAGGATCATCACT+GGG | 0.644328 | 1:-8442324 | MsG0180000597.01.T01:three_prime_UTR |
GAGGGATGAAGTGCAACACA+AGG | 0.648511 | 1:+8445272 | None:intergenic |
TCAAAGGATCAACTTCAGGT+GGG | 0.652726 | 1:-8442934 | MsG0180000597.01.T01:CDS |
ATGGAATGTAGAATCCCCAC+CGG | 0.657028 | 1:+8442679 | None:intergenic |
GAAAAGCTGCATATCCCAAG+TGG | 0.662621 | 1:-8443651 | MsG0180000597.01.T01:CDS |
ACCAGTCAACATTTCAACAA+CGG | 0.664981 | 1:+8443734 | None:intergenic |
CCTACAAGGATTATAACCCA+TGG | 0.667895 | 1:-8442161 | MsG0180000597.01.T01:three_prime_UTR |
AATGGCAGAATCATTCTGCG+TGG | 0.675086 | 1:-8442578 | MsG0180000597.01.T01:CDS |
TCTTTCGGGATTGTAAACAT+GGG | 0.678318 | 1:-8445193 | MsG0180000597.01.T01:five_prime_UTR |
AATGAACTGGCTAATGATGG+AGG | 0.681313 | 1:-8443030 | MsG0180000597.01.T01:CDS |
CAAAACATGAATGTCCCAGA+CGG | 0.682309 | 1:-8442868 | MsG0180000597.01.T01:CDS |
CCATGGCAACACAACATGGG+GGG | 0.686405 | 1:-8442144 | MsG0180000597.01.T01:three_prime_UTR |
GTAAACATGGGTATCAATGG+CGG | 0.686930 | 1:-8445181 | MsG0180000597.01.T01:five_prime_UTR |
TTAGCTCAGATATTGCTCAG+AGG | 0.694542 | 1:-8443851 | MsG0180000597.01.T01:CDS |
AGGAAAAGCACTCACCGGTG+GGG | 0.698636 | 1:-8442693 | MsG0180000597.01.T01:CDS |
GAACTGGCTAATGATGGAGG+AGG | 0.699870 | 1:-8443027 | MsG0180000597.01.T01:CDS |
TCCAGAACAATGGAAACCAG+AGG | 0.702393 | 1:-8443805 | MsG0180000597.01.T01:CDS |
CATACTCAAAACATGCACCA+AGG | 0.704149 | 1:+8443604 | None:intergenic |
CCCATGGCAACACAACATGG+GGG | 0.707761 | 1:-8442145 | MsG0180000597.01.T01:three_prime_UTR |
TTATAGGGTCATGAATACCG+TGG | 0.720576 | 1:+8442791 | None:intergenic |
CCAACAGGACATCCATACCA+AGG | 0.725485 | 1:+8443705 | None:intergenic |
GATAGTGTAGAAACATCACA+TGG | 0.731382 | 1:+8445240 | None:intergenic |
CAACACAAGGACTTCCCAGG+AGG | 0.733345 | 1:+8445285 | None:intergenic |
GCAGCACTGACTACACCGAG+TGG | 0.764598 | 1:-8442963 | MsG0180000597.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATACATAATAAAGAAA+AGG | + | Chr1:8442282-8442301 | None:intergenic | 10.0% |
!! | AAAAAATAAAATGCAAACAA+AGG | + | Chr1:8441946-8441965 | None:intergenic | 15.0% |
!!! | ACTATCTTTTTATTTAAGAA+GGG | - | Chr1:8441877-8441896 | MsG0180000597.01.T01:three_prime_UTR | 15.0% |
!!! | TATAATTTTGATGACAAATA+CGG | + | Chr1:8445282-8445301 | None:intergenic | 15.0% |
!!! | TTCTTTATTATGTATTTTTG+TGG | - | Chr1:8442283-8442302 | MsG0180000597.01.T01:three_prime_UTR | 15.0% |
!! | AATTTCAATGTTAAATGGAA+GGG | - | Chr1:8442790-8442809 | MsG0180000597.01.T01:CDS | 20.0% |
!! | ATCATTATGAAATTGTATGA+CGG | - | Chr1:8442912-8442931 | MsG0180000597.01.T01:CDS | 20.0% |
!! | ATGCTAAATTAAACAAGAAT+CGG | + | Chr1:8443615-8443634 | None:intergenic | 20.0% |
!! | TGAATAACATTAGTTGAAAA+TGG | - | Chr1:8445125-8445144 | MsG0180000597.01.T01:five_prime_UTR | 20.0% |
!!! | ATCTTTAACTTATATAGCAT+AGG | - | Chr1:8443025-8443044 | MsG0180000597.01.T01:CDS | 20.0% |
!!! | CACTATCTTTTTATTTAAGA+AGG | - | Chr1:8441876-8441895 | MsG0180000597.01.T01:three_prime_UTR | 20.0% |
!!! | CTATCTTTTTATTTAAGAAG+GGG | - | Chr1:8441878-8441897 | MsG0180000597.01.T01:three_prime_UTR | 20.0% |
!!! | TATCTTTTTATTTAAGAAGG+GGG | - | Chr1:8441879-8441898 | MsG0180000597.01.T01:three_prime_UTR | 20.0% |
!!! | TCTTTAACTTATATAGCATA+GGG | - | Chr1:8443026-8443045 | MsG0180000597.01.T01:CDS | 20.0% |
!!! | TTCTTTTGATTATGAGATTT+TGG | - | Chr1:8442481-8442500 | MsG0180000597.01.T01:CDS | 20.0% |
! | AAAATTACTGGTCAATACTA+AGG | - | Chr1:8443049-8443068 | MsG0180000597.01.T01:intron | 25.0% |
! | ATGAAAGTAATTCCAAAATC+AGG | - | Chr1:8444115-8444134 | MsG0180000597.01.T01:intron | 25.0% |
! | CATGGAATTTCAATGTTAAA+TGG | - | Chr1:8442785-8442804 | MsG0180000597.01.T01:CDS | 25.0% |
! | GAAGTTGTAAATATCCTTTA+AGG | - | Chr1:8445192-8445211 | MsG0180000597.01.T01:five_prime_UTR | 25.0% |
! | GAATTTCAATGTTAAATGGA+AGG | - | Chr1:8442789-8442808 | MsG0180000597.01.T01:CDS | 25.0% |
! | GTATTTACATATTTATTCCG+AGG | - | Chr1:8442120-8442139 | MsG0180000597.01.T01:three_prime_UTR | 25.0% |
! | GTGCATTTATTTCAATGTAT+AGG | - | Chr1:8442826-8442845 | MsG0180000597.01.T01:CDS | 25.0% |
! | GTTGAGTGTTAAGTTTATTT+GGG | - | Chr1:8442051-8442070 | MsG0180000597.01.T01:three_prime_UTR | 25.0% |
! | TAAGTCAATGAAGATGTATT+TGG | - | Chr1:8442207-8442226 | MsG0180000597.01.T01:three_prime_UTR | 25.0% |
! | TCGATGTATGAATTCTTATA+GGG | + | Chr1:8444327-8444346 | None:intergenic | 25.0% |
! | TTGAGTGTTAAGTTTATTTG+GGG | - | Chr1:8442052-8442071 | MsG0180000597.01.T01:three_prime_UTR | 25.0% |
! | TTTACTTGATATCACTTCAT+AGG | - | Chr1:8442002-8442021 | MsG0180000597.01.T01:three_prime_UTR | 25.0% |
! | TTTCAATTATCACTTCACAT+TGG | - | Chr1:8443646-8443665 | MsG0180000597.01.T01:CDS | 25.0% |
!! | ATATAACATTTTTCTTGCCT+CGG | + | Chr1:8442140-8442159 | None:intergenic | 25.0% |
!!! | ATATTTACAGCTTTGAAACT+AGG | - | Chr1:8444828-8444847 | MsG0180000597.01.T01:five_prime_UTR | 25.0% |
!!! | CTTATTGATTTAGTTCTTTC+AGG | + | Chr1:8443920-8443939 | None:intergenic | 25.0% |
!!! | GCTAATATCCTTTTTAAAGA+TGG | - | Chr1:8444990-8445009 | MsG0180000597.01.T01:five_prime_UTR | 25.0% |
!!! | GCTATTGTAGTTTTGATATA+TGG | - | Chr1:8442029-8442048 | MsG0180000597.01.T01:three_prime_UTR | 25.0% |
AAAAGGATATTAGCAACTGA+AGG | + | Chr1:8444984-8445003 | None:intergenic | 30.0% | |
AAAATCAACAACTTCAACCT+CGG | + | Chr1:8444724-8444743 | None:intergenic | 30.0% | |
AAACATCACATGGCAAAAAA+TGG | + | Chr1:8441853-8441872 | None:intergenic | 30.0% | |
AAATTGTATGACGGTTCAAT+TGG | - | Chr1:8442921-8442940 | MsG0180000597.01.T01:CDS | 30.0% | |
AATCCGTTTCAAATGACATA+GGG | + | Chr1:8443328-8443347 | None:intergenic | 30.0% | |
ACGTTATTAACATTGAGCTT+AGG | + | Chr1:8442355-8442374 | None:intergenic | 30.0% | |
AGCAAAAACCAATATGTTGA+AGG | - | Chr1:8444903-8444922 | MsG0180000597.01.T01:five_prime_UTR | 30.0% | |
AGTATTACAACCTTAGATTC+AGG | - | Chr1:8442422-8442441 | MsG0180000597.01.T01:exon | 30.0% | |
ATTCATGGATACTACCAAAT+GGG | - | Chr1:8444631-8444650 | MsG0180000597.01.T01:CDS | 30.0% | |
ATTCCTGTGATGTATTATCT+TGG | - | Chr1:8443848-8443867 | MsG0180000597.01.T01:CDS | 30.0% | |
ATTGTAAACATGGGTATCAA+TGG | - | Chr1:8441916-8441935 | MsG0180000597.01.T01:three_prime_UTR | 30.0% | |
CAGAAAATTTCAAAGATCAC+AGG | + | Chr1:8442390-8442409 | None:intergenic | 30.0% | |
GAAGAACATTACATGGTTTA+AGG | + | Chr1:8443160-8443179 | None:intergenic | 30.0% | |
GGTTGAGTGTTAAGTTTATT+TGG | - | Chr1:8442050-8442069 | MsG0180000597.01.T01:three_prime_UTR | 30.0% | |
GTCGATGTATGAATTCTTAT+AGG | + | Chr1:8444328-8444347 | None:intergenic | 30.0% | |
TAGATATTCTGCGTCTTTAA+AGG | - | Chr1:8443543-8443562 | MsG0180000597.01.T01:intron | 30.0% | |
TAGTGTCAACATATCATTTC+AGG | - | Chr1:8445300-8445319 | MsG0180000597.01.T01:five_prime_UTR | 30.0% | |
TAGTTGGAAACAAAGTGAAA+AGG | - | Chr1:8444856-8444875 | MsG0180000597.01.T01:five_prime_UTR | 30.0% | |
TATACAGAGCTAATCCTTAA+AGG | + | Chr1:8445209-8445228 | None:intergenic | 30.0% | |
TATAGCATAGGGAAAATTAC+TGG | - | Chr1:8443037-8443056 | MsG0180000597.01.T01:CDS | 30.0% | |
TCATTGAGAAGAACATTACA+TGG | + | Chr1:8443167-8443186 | None:intergenic | 30.0% | |
TTAAATGGAAGGGTTAGATT+TGG | - | Chr1:8442800-8442819 | MsG0180000597.01.T01:CDS | 30.0% | |
TTATGATCATGACCGATTAT+TGG | - | Chr1:8443730-8443749 | MsG0180000597.01.T01:CDS | 30.0% | |
TTCCTGTGATGTATTATCTT+GGG | - | Chr1:8443849-8443868 | MsG0180000597.01.T01:CDS | 30.0% | |
TTGAAACTAGGCATATTAGT+TGG | - | Chr1:8444840-8444859 | MsG0180000597.01.T01:five_prime_UTR | 30.0% | |
! | ATTATGGATTTGTTCTAGTG+AGG | - | Chr1:8444284-8444303 | MsG0180000597.01.T01:intron | 30.0% |
! | GTTAAGCACCATCTTTAAAA+AGG | + | Chr1:8445001-8445020 | None:intergenic | 30.0% |
! | TTAGCTTGATAGAAGTCAAA+GGG | + | Chr1:8442865-8442884 | None:intergenic | 30.0% |
! | TTATGGATTTGTTCTAGTGA+GGG | - | Chr1:8444285-8444304 | MsG0180000597.01.T01:intron | 30.0% |
!! | AGAAAAGTATCAACATGTTG+AGG | - | Chr1:8444764-8444783 | MsG0180000597.01.T01:five_prime_UTR | 30.0% |
!! | CATGTTTTGAGTATGATTTG+AGG | - | Chr1:8443504-8443523 | MsG0180000597.01.T01:intron | 30.0% |
!! | TTGATTTTAACACTTGTCCT+GGG | - | Chr1:8444736-8444755 | MsG0180000597.01.T01:five_prime_UTR | 30.0% |
!!! | TGTTTTGACCTTCAACATAT+TGG | + | Chr1:8444914-8444933 | None:intergenic | 30.0% |
!!! | TTTTGAGATTTGCATGAGTT+GGG | + | Chr1:8444217-8444236 | None:intergenic | 30.0% |
ACCAGTCAACATTTCAACAA+CGG | + | Chr1:8443369-8443388 | None:intergenic | 35.0% | |
AGAGCTTCTGTTGGATTTAT+TGG | - | Chr1:8444460-8444479 | MsG0180000597.01.T01:CDS | 35.0% | |
AGGAATACAGCTAATCTAGA+AGG | + | Chr1:8443834-8443853 | None:intergenic | 35.0% | |
AGTGTTAAGTTTATTTGGGG+TGG | - | Chr1:8442055-8442074 | MsG0180000597.01.T01:three_prime_UTR | 35.0% | |
ATCACATGGCAAAAAATGGA+GGG | + | Chr1:8441849-8441868 | None:intergenic | 35.0% | |
ATTAAACAAGAATCGGCATC+AGG | + | Chr1:8443608-8443627 | None:intergenic | 35.0% | |
CCTGTGAATATTCCAAGATT+GGG | - | Chr1:8443768-8443787 | MsG0180000597.01.T01:CDS | 35.0% | |
GAATCCGTTTCAAATGACAT+AGG | + | Chr1:8443329-8443348 | None:intergenic | 35.0% | |
GAGCTTCTGTTGGATTTATT+GGG | - | Chr1:8444461-8444480 | MsG0180000597.01.T01:CDS | 35.0% | |
GATAGTGTAGAAACATCACA+TGG | + | Chr1:8441863-8441882 | None:intergenic | 35.0% | |
GATGTTACATCCAATCAAAG+AGG | - | Chr1:8442685-8442704 | MsG0180000597.01.T01:CDS | 35.0% | |
GATTCATGGATACTACCAAA+TGG | - | Chr1:8444630-8444649 | MsG0180000597.01.T01:CDS | 35.0% | |
TCATTAGCTAGTGTTTGAAC+TGG | - | Chr1:8445060-8445079 | MsG0180000597.01.T01:five_prime_UTR | 35.0% | |
TCCTGTGAATATTCCAAGAT+TGG | - | Chr1:8443767-8443786 | MsG0180000597.01.T01:CDS | 35.0% | |
TCGGCATCAGGAAAAAAAAA+TGG | + | Chr1:8443596-8443615 | None:intergenic | 35.0% | |
TCTAGACATTCCTGAATCTA+AGG | + | Chr1:8442435-8442454 | None:intergenic | 35.0% | |
TCTTTCGGGATTGTAAACAT+GGG | - | Chr1:8441907-8441926 | MsG0180000597.01.T01:three_prime_UTR | 35.0% | |
TGAATATTCCAAGATTGGGT+AGG | - | Chr1:8443772-8443791 | MsG0180000597.01.T01:CDS | 35.0% | |
TTAGAACGTACTGCAGATTA+TGG | - | Chr1:8444268-8444287 | MsG0180000597.01.T01:intron | 35.0% | |
TTCACATGATCCTCTTTGAT+TGG | + | Chr1:8442698-8442717 | None:intergenic | 35.0% | |
TTCCCAAGATAATACATCAC+AGG | + | Chr1:8443854-8443873 | None:intergenic | 35.0% | |
! | ATGGTTTAAGGTTGAGAACA+AGG | + | Chr1:8443148-8443167 | None:intergenic | 35.0% |
! | GAAAGTACAGCTGATAGAAT+TGG | + | Chr1:8445090-8445109 | None:intergenic | 35.0% |
! | GTCATTTGAAACGGATTCAT+GGG | - | Chr1:8443331-8443350 | MsG0180000597.01.T01:intron | 35.0% |
! | GTTAGCTTGATAGAAGTCAA+AGG | + | Chr1:8442866-8442885 | None:intergenic | 35.0% |
! | TCATTTGAAACGGATTCATG+GGG | - | Chr1:8443332-8443351 | MsG0180000597.01.T01:intron | 35.0% |
! | TCTCATTACCTGATGTTTTG+AGG | - | Chr1:8442976-8442995 | MsG0180000597.01.T01:CDS | 35.0% |
! | TGTCATTTGAAACGGATTCA+TGG | - | Chr1:8443330-8443349 | MsG0180000597.01.T01:intron | 35.0% |
! | TGTCCTGTTGGTGAAATATA+CGG | - | Chr1:8443407-8443426 | MsG0180000597.01.T01:intron | 35.0% |
!! | GTTGATTTTAACACTTGTCC+TGG | - | Chr1:8444735-8444754 | MsG0180000597.01.T01:five_prime_UTR | 35.0% |
!!! | CTTGGGAAGTGTTTACATTT+TGG | - | Chr1:8443866-8443885 | MsG0180000597.01.T01:CDS | 35.0% |
!!! | GTTTTGAGATTTGCATGAGT+TGG | + | Chr1:8444218-8444237 | None:intergenic | 35.0% |
AAACCCTTCAGAACTCGAAA+TGG | - | Chr1:8444504-8444523 | MsG0180000597.01.T01:CDS | 40.0% | |
AACATGTTGAGGATCATCAC+TGG | - | Chr1:8444775-8444794 | MsG0180000597.01.T01:five_prime_UTR | 40.0% | |
AAGAAGGGGGAAATGTCTTT+CGG | - | Chr1:8441892-8441911 | MsG0180000597.01.T01:three_prime_UTR | 40.0% | |
AAGTTGGCTAGACTAAGAGA+TGG | - | Chr1:8442948-8442967 | MsG0180000597.01.T01:CDS | 40.0% | |
AATATTCACAGGACAGGTAC+AGG | + | Chr1:8443760-8443779 | None:intergenic | 40.0% | |
AATGAACTGGCTAATGATGG+AGG | - | Chr1:8444070-8444089 | MsG0180000597.01.T01:intron | 40.0% | |
ACACATCACCTCAAAACATC+AGG | + | Chr1:8442987-8443006 | None:intergenic | 40.0% | |
ACATCTTAGCAGCAACTTCA+TGG | + | Chr1:8442670-8442689 | None:intergenic | 40.0% | |
ACATGTTGAGGATCATCACT+GGG | - | Chr1:8444776-8444795 | MsG0180000597.01.T01:five_prime_UTR | 40.0% | |
ACCGTTGTTGAAATGTTGAC+TGG | - | Chr1:8443365-8443384 | MsG0180000597.01.T01:intron | 40.0% | |
AGCAAACACTAGAAACTCCT+TGG | + | Chr1:8442760-8442779 | None:intergenic | 40.0% | |
AGGAATGTCTAGAGAAGTCA+TGG | - | Chr1:8442442-8442461 | MsG0180000597.01.T01:CDS | 40.0% | |
AGGATATTCTCAATGGGAGA+AGG | + | Chr1:8443479-8443498 | None:intergenic | 40.0% | |
ATGCCTAGTACAACTAGAAC+AGG | + | Chr1:8444810-8444829 | None:intergenic | 40.0% | |
ATTACATGGCTCCAGAACAA+TGG | - | Chr1:8443285-8443304 | MsG0180000597.01.T01:intron | 40.0% | |
ATTCATTCTGCCTATGTTGC+AGG | - | Chr1:8444041-8444060 | MsG0180000597.01.T01:intron | 40.0% | |
ATTCGAATGGCGTCGTAAAA+GGG | - | Chr1:8444585-8444604 | MsG0180000597.01.T01:CDS | 40.0% | |
CAAAACATGAATGTCCCAGA+CGG | - | Chr1:8444232-8444251 | MsG0180000597.01.T01:intron | 40.0% | |
CATACTCAAAACATGCACCA+AGG | + | Chr1:8443499-8443518 | None:intergenic | 40.0% | |
CATCACATGGCAAAAAATGG+AGG | + | Chr1:8441850-8441869 | None:intergenic | 40.0% | |
CATTCCATCAATCGCAATGA+CGG | - | Chr1:8444436-8444455 | MsG0180000597.01.T01:CDS | 40.0% | |
CCCAATCTTGGAATATTCAC+AGG | + | Chr1:8443771-8443790 | None:intergenic | 40.0% | |
CCTACAAGGATTATAACCCA+TGG | - | Chr1:8444939-8444958 | MsG0180000597.01.T01:five_prime_UTR | 40.0% | |
CGCAGAATATCTACCATTGA+AGG | + | Chr1:8443536-8443555 | None:intergenic | 40.0% | |
CTGAATGAACTGGCTAATGA+TGG | - | Chr1:8444067-8444086 | MsG0180000597.01.T01:intron | 40.0% | |
GAAGAGCCAAGCAAAAGATT+GGG | + | Chr1:8443224-8443243 | None:intergenic | 40.0% | |
GATACTACCAAATGGGTGTT+TGG | - | Chr1:8444638-8444657 | MsG0180000597.01.T01:CDS | 40.0% | |
GATCCGTATATTTCACCAAC+AGG | + | Chr1:8443413-8443432 | None:intergenic | 40.0% | |
GCACCAAGGATATTCTCAAT+GGG | + | Chr1:8443485-8443504 | None:intergenic | 40.0% | |
GCTTGGAAGTCCTAATTACA+TGG | - | Chr1:8443271-8443290 | MsG0180000597.01.T01:intron | 40.0% | |
GGTACAGGTTCACCAATAAT+CGG | + | Chr1:8443745-8443764 | None:intergenic | 40.0% | |
GGTACGCTTGAAAGATGAAA+AGG | - | Chr1:8444387-8444406 | MsG0180000597.01.T01:CDS | 40.0% | |
GGTCAATACTAAGGATGTGT+TGG | - | Chr1:8443058-8443077 | MsG0180000597.01.T01:intron | 40.0% | |
GTAAACATGGGTATCAATGG+CGG | - | Chr1:8441919-8441938 | MsG0180000597.01.T01:three_prime_UTR | 40.0% | |
GTCAAAACAACAGTCCTACA+AGG | - | Chr1:8444925-8444944 | MsG0180000597.01.T01:five_prime_UTR | 40.0% | |
GTCTTTCGGGATTGTAAACA+TGG | - | Chr1:8441906-8441925 | MsG0180000597.01.T01:three_prime_UTR | 40.0% | |
GTTTGGTTGTCAAGTTTCCA+GGG | - | Chr1:8444655-8444674 | MsG0180000597.01.T01:CDS | 40.0% | |
TATTCTCAATGGGAGAAGGA+AGG | + | Chr1:8443475-8443494 | None:intergenic | 40.0% | |
TCAAAGGATCAACTTCAGGT+GGG | - | Chr1:8444166-8444185 | MsG0180000597.01.T01:CDS | 40.0% | |
TCTCCCATTGAGAATATCCT+TGG | - | Chr1:8443479-8443498 | MsG0180000597.01.T01:intron | 40.0% | |
TCTTGGAATATTCACAGGAC+AGG | + | Chr1:8443766-8443785 | None:intergenic | 40.0% | |
TGAAGAGCCAAGCAAAAGAT+TGG | + | Chr1:8443225-8443244 | None:intergenic | 40.0% | |
TGCACCAAGGATATTCTCAA+TGG | + | Chr1:8443486-8443505 | None:intergenic | 40.0% | |
TGCTGAAGTTTCAAAGGTTC+AGG | + | Chr1:8442572-8442591 | None:intergenic | 40.0% | |
TGGGAATGAATCAAACACCT+TGG | - | Chr1:8444689-8444708 | MsG0180000597.01.T01:exon | 40.0% | |
TGTTTGGTTGTCAAGTTTCC+AGG | - | Chr1:8444654-8444673 | MsG0180000597.01.T01:CDS | 40.0% | |
TTAGCTCAGATATTGCTCAG+AGG | - | Chr1:8443249-8443268 | MsG0180000597.01.T01:intron | 40.0% | |
TTATAGGGTCATGAATACCG+TGG | + | Chr1:8444312-8444331 | None:intergenic | 40.0% | |
TTCAGGTACAGACATTATCC+TGG | + | Chr1:8443903-8443922 | None:intergenic | 40.0% | |
TTGACAACCAAACACCCATT+TGG | + | Chr1:8444648-8444667 | None:intergenic | 40.0% | |
TTTGAGGAATCGACCTTCAA+TGG | - | Chr1:8443520-8443539 | MsG0180000597.01.T01:intron | 40.0% | |
! | AAAGGTTCAGGTTCAATCCA+TGG | + | Chr1:8442560-8442579 | None:intergenic | 40.0% |
! | AAGGATGTGTTGGTCGTTAA+TGG | - | Chr1:8443068-8443087 | MsG0180000597.01.T01:intron | 40.0% |
! | ACAAAGTGAAAAGGTGCAAG+AGG | - | Chr1:8444865-8444884 | MsG0180000597.01.T01:five_prime_UTR | 40.0% |
! | AGACCTGTTCTAGTTGTACT+AGG | - | Chr1:8444804-8444823 | MsG0180000597.01.T01:five_prime_UTR | 40.0% |
! | AGGCCCTATGTCATTTGAAA+CGG | - | Chr1:8443322-8443341 | MsG0180000597.01.T01:intron | 40.0% |
! | CCATGGGTTATAATCCTTGT+AGG | + | Chr1:8444942-8444961 | None:intergenic | 40.0% |
! | GAATTATGCTTGAAGTGCCA+AGG | - | Chr1:8442740-8442759 | MsG0180000597.01.T01:CDS | 40.0% |
! | GACAACGATCAAGCGATTTT+GGG | - | Chr1:8443185-8443204 | MsG0180000597.01.T01:intron | 40.0% |
! | GGGCTTAACACATTCTCTTT+TGG | + | Chr1:8444562-8444581 | None:intergenic | 40.0% |
! | GGTATTCCCAATCTTTTGCT+TGG | - | Chr1:8443215-8443234 | MsG0180000597.01.T01:intron | 40.0% |
! | TCTAGTGTTTGCTGGTTACA+TGG | - | Chr1:8442767-8442786 | MsG0180000597.01.T01:CDS | 40.0% |
! | TCTCTTTTGGCCTAACAAAC+TGG | + | Chr1:8444549-8444568 | None:intergenic | 40.0% |
! | TGACAACGATCAAGCGATTT+TGG | - | Chr1:8443184-8443203 | MsG0180000597.01.T01:intron | 40.0% |
! | TGATACTTTTCTACCATCCC+AGG | + | Chr1:8444756-8444775 | None:intergenic | 40.0% |
! | TTGAAACTTCAGCACCGAAT+TGG | - | Chr1:8442578-8442597 | MsG0180000597.01.T01:CDS | 40.0% |
! | TTGTTGTTGCTCAGACAACA+AGG | - | Chr1:8442231-8442250 | MsG0180000597.01.T01:three_prime_UTR | 40.0% |
! | TTTTAACACTTGTCCTGGGA+TGG | - | Chr1:8444740-8444759 | MsG0180000597.01.T01:five_prime_UTR | 40.0% |
!! | AAGGAGTTTCTAGTGTTTGC+TGG | - | Chr1:8442759-8442778 | MsG0180000597.01.T01:CDS | 40.0% |
!! | ATTCGGTGCTGAAGTTTCAA+AGG | + | Chr1:8442578-8442597 | None:intergenic | 40.0% |
!! | ATTCTAGAGCTTCACGCTAA+AGG | - | Chr1:8443119-8443138 | MsG0180000597.01.T01:intron | 40.0% |
!! | TGAAAAGGAAAAGCACTCAC+CGG | - | Chr1:8444402-8444421 | MsG0180000597.01.T01:CDS | 40.0% |
!! | TGTTCTGGAGCCATGTAATT+AGG | + | Chr1:8443284-8443303 | None:intergenic | 40.0% |
!! | TTCTAGAGCTTCACGCTAAA+GGG | - | Chr1:8443120-8443139 | MsG0180000597.01.T01:intron | 40.0% |
AACCCATGGCAACACAACAT+GGG | - | Chr1:8444953-8444972 | MsG0180000597.01.T01:five_prime_UTR | 45.0% | |
AACTTCAACCTCGGAAGGAT+CGG | + | Chr1:8444715-8444734 | None:intergenic | 45.0% | |
AATGACGGTAGAGCTTCTGT+TGG | - | Chr1:8444451-8444470 | MsG0180000597.01.T01:CDS | 45.0% | |
AATGGCAGAATCATTCTGCG+TGG | - | Chr1:8444522-8444541 | MsG0180000597.01.T01:CDS | 45.0% | |
ACAACAGACCTACCCAATCT+TGG | + | Chr1:8443783-8443802 | None:intergenic | 45.0% | |
ACTGGTAGTCAACCTTGGTA+TGG | - | Chr1:8443383-8443402 | MsG0180000597.01.T01:intron | 45.0% | |
AGAAGGGGGAAATGTCTTTC+GGG | - | Chr1:8441893-8441912 | MsG0180000597.01.T01:three_prime_UTR | 45.0% | |
AGATTGGGTAGGTCTGTTGT+AGG | - | Chr1:8443783-8443802 | MsG0180000597.01.T01:CDS | 45.0% | |
ATGAATCCTACCAGTAGCAG+AGG | + | Chr1:8444617-8444636 | None:intergenic | 45.0% | |
ATGGAATGTAGAATCCCCAC+CGG | + | Chr1:8444424-8444443 | None:intergenic | 45.0% | |
ATGGCAGAATCATTCTGCGT+GGG | - | Chr1:8444523-8444542 | MsG0180000597.01.T01:CDS | 45.0% | |
CAGACATTATCCTGGATCAG+AGG | + | Chr1:8443895-8443914 | None:intergenic | 45.0% | |
CATTCAGTGACCTGCAACAT+AGG | + | Chr1:8444054-8444073 | None:intergenic | 45.0% | |
CCTCTCAAAGGATCAACTTC+AGG | - | Chr1:8444162-8444181 | MsG0180000597.01.T01:CDS | 45.0% | |
CTCAAAGGATCAACTTCAGG+TGG | - | Chr1:8444165-8444184 | MsG0180000597.01.T01:CDS | 45.0% | |
GAAAAGCTGCATATCCCAAG+TGG | - | Chr1:8443449-8443468 | MsG0180000597.01.T01:intron | 45.0% | |
GATTCGAATGGCGTCGTAAA+AGG | - | Chr1:8444584-8444603 | MsG0180000597.01.T01:CDS | 45.0% | |
GCAAGCCAAACATCACCAAA+GGG | + | Chr1:8442611-8442630 | None:intergenic | 45.0% | |
TAACCCATGGCAACACAACA+TGG | - | Chr1:8444952-8444971 | MsG0180000597.01.T01:five_prime_UTR | 45.0% | |
TCAACAACTTCAACCTCGGA+AGG | + | Chr1:8444720-8444739 | None:intergenic | 45.0% | |
TCAGATATTGCTCAGAGGCT+TGG | - | Chr1:8443254-8443273 | MsG0180000597.01.T01:intron | 45.0% | |
TCCAGAACAATGGAAACCAG+AGG | - | Chr1:8443295-8443314 | MsG0180000597.01.T01:intron | 45.0% | |
TCTACCGTCATTGCGATTGA+TGG | + | Chr1:8444443-8444462 | None:intergenic | 45.0% | |
TCTGCTACTGGTAGGATTCA+TGG | - | Chr1:8444616-8444635 | MsG0180000597.01.T01:CDS | 45.0% | |
TGCAAGCCAAACATCACCAA+AGG | + | Chr1:8442612-8442631 | None:intergenic | 45.0% | |
TGGCTAGACTAAGAGATGGA+TGG | - | Chr1:8442952-8442971 | MsG0180000597.01.T01:CDS | 45.0% | |
TGGTCGTTAATGGCAGGTAT+GGG | - | Chr1:8443078-8443097 | MsG0180000597.01.T01:intron | 45.0% | |
TGTTGTAGGACTAGAGCTCA+AGG | - | Chr1:8443797-8443816 | MsG0180000597.01.T01:CDS | 45.0% | |
TTATTGGGCTGCAAACTCTC+TGG | - | Chr1:8444476-8444495 | MsG0180000597.01.T01:CDS | 45.0% | |
TTCGAATGGCGTCGTAAAAG+GGG | - | Chr1:8444586-8444605 | MsG0180000597.01.T01:CDS | 45.0% | |
TTGCAGGTCACTGAATGAAC+TGG | - | Chr1:8444057-8444076 | MsG0180000597.01.T01:intron | 45.0% | |
TTGGTCGTTAATGGCAGGTA+TGG | - | Chr1:8443077-8443096 | MsG0180000597.01.T01:intron | 45.0% | |
TTTGTTCTAGTGAGGGTCCA+CGG | - | Chr1:8444292-8444311 | MsG0180000597.01.T01:intron | 45.0% | |
! | ACCTCTGGTTTCCATTGTTC+TGG | + | Chr1:8443299-8443318 | None:intergenic | 45.0% |
! | ATCCTTTGAGAGGAACCACT+CGG | + | Chr1:8444155-8444174 | None:intergenic | 45.0% |
! | ATGTGTTGGTCGTTAATGGC+AGG | - | Chr1:8443072-8443091 | MsG0180000597.01.T01:intron | 45.0% |
! | CCTGAAGTTGATCCTTTGAG+AGG | + | Chr1:8444165-8444184 | None:intergenic | 45.0% |
! | CGGTTCAATTGGTGACAAGT+TGG | - | Chr1:8442932-8442951 | MsG0180000597.01.T01:CDS | 45.0% |
! | GAAACGGATTCATGGGGATT+CGG | - | Chr1:8443338-8443357 | MsG0180000597.01.T01:intron | 45.0% |
! | TAGTCAGTGCTGCCTGATTT+TGG | + | Chr1:8444130-8444149 | None:intergenic | 45.0% |
! | TCGGAACAGCAGCAGTTTTA+GGG | + | Chr1:8442523-8442542 | None:intergenic | 45.0% |
! | TGAGATTTGCATGAGTTGGG+AGG | + | Chr1:8444214-8444233 | None:intergenic | 45.0% |
! | TGTTAAGCCCTCGATTCGAA+TGG | - | Chr1:8444572-8444591 | MsG0180000597.01.T01:CDS | 45.0% |
! | TGTTGACTGGTAGTCAACCT+TGG | - | Chr1:8443378-8443397 | MsG0180000597.01.T01:intron | 45.0% |
! | TTCCAGGGATGGTGAGTTTT+GGG | - | Chr1:8444670-8444689 | MsG0180000597.01.T01:CDS | 45.0% |
! | TTTCCAGGGATGGTGAGTTT+TGG | - | Chr1:8444669-8444688 | MsG0180000597.01.T01:CDS | 45.0% |
!! | CTGCCATTTCGAGTTCTGAA+GGG | + | Chr1:8444510-8444529 | None:intergenic | 45.0% |
!! | TCTGCCATTTCGAGTTCTGA+AGG | + | Chr1:8444511-8444530 | None:intergenic | 45.0% |
!!! | ATTTTGGCTTCCTCTGATCC+AGG | - | Chr1:8443882-8443901 | MsG0180000597.01.T01:CDS | 45.0% |
AAGCTGTTTGTGCACGAGCA+TGG | - | Chr1:8443944-8443963 | MsG0180000597.01.T01:CDS | 50.0% | |
AATCCATGGACTTGCGCGAT+TGG | + | Chr1:8442546-8442565 | None:intergenic | 50.0% | |
AATGGCGTCGTAAAAGGGGA+GGG | - | Chr1:8444590-8444609 | MsG0180000597.01.T01:CDS | 50.0% | |
ACCCATGGCAACACAACATG+GGG | - | Chr1:8444954-8444973 | MsG0180000597.01.T01:five_prime_UTR | 50.0% | |
ACTCTTGAACGCGTCACGAA+TGG | - | Chr1:8444346-8444365 | MsG0180000597.01.T01:CDS | 50.0% | |
AGTTGGGAGGCTTTCTGGAT+CGG | + | Chr1:8444201-8444220 | None:intergenic | 50.0% | |
CAAAGGGTCCTCGACCAATT+CGG | + | Chr1:8442595-8442614 | None:intergenic | 50.0% | |
CAATGGAAACCAGAGGTCAG+AGG | - | Chr1:8443302-8443321 | MsG0180000597.01.T01:intron | 50.0% | |
CCAACAGGACATCCATACCA+AGG | + | Chr1:8443398-8443417 | None:intergenic | 50.0% | |
CCTTGGTATGGATGTCCTGT+TGG | - | Chr1:8443395-8443414 | MsG0180000597.01.T01:intron | 50.0% | |
GAGGGATGAAGTGCAACACA+AGG | + | Chr1:8441831-8441850 | None:intergenic | 50.0% | |
GGAGGAGGATGGAGATATCA+AGG | - | Chr1:8444088-8444107 | MsG0180000597.01.T01:intron | 50.0% | |
GGTTGTCAAGTTTCCAGGGA+TGG | - | Chr1:8444659-8444678 | MsG0180000597.01.T01:CDS | 50.0% | |
TACGACGCCATTCGAATCGA+GGG | + | Chr1:8444582-8444601 | None:intergenic | 50.0% | |
TCAACTTCAGGTGGGTGACA+TGG | - | Chr1:8444174-8444193 | MsG0180000597.01.T01:CDS | 50.0% | |
TTACGACGCCATTCGAATCG+AGG | + | Chr1:8444583-8444602 | None:intergenic | 50.0% | |
TTCCCAAAACTCACCATCCC+TGG | + | Chr1:8444675-8444694 | None:intergenic | 50.0% | |
! | GAACTGGCTAATGATGGAGG+AGG | - | Chr1:8444073-8444092 | MsG0180000597.01.T01:intron | 50.0% |
! | GTCGGAACAGCAGCAGTTTT+AGG | + | Chr1:8442524-8442543 | None:intergenic | 50.0% |
! | TATGGGATCGATCTGGCTCA+AGG | - | Chr1:8443095-8443114 | MsG0180000597.01.T01:intron | 50.0% |
! | TGGCTAATGATGGAGGAGGA+TGG | - | Chr1:8444077-8444096 | MsG0180000597.01.T01:intron | 50.0% |
!! | AAAGGAAAAGCACTCACCGG+TGG | - | Chr1:8444405-8444424 | MsG0180000597.01.T01:CDS | 50.0% |
!! | AAGGAAAAGCACTCACCGGT+GGG | - | Chr1:8444406-8444425 | MsG0180000597.01.T01:CDS | 50.0% |
!! | CAAGCGATTTTGGGAGACGT+TGG | - | Chr1:8443194-8443213 | MsG0180000597.01.T01:intron | 50.0% |
!! | GAGGACCCTTTGGTGATGTT+TGG | - | Chr1:8442603-8442622 | MsG0180000597.01.T01:CDS | 50.0% |
!!! | AGCAGCAGTTTTAGGGACGT+CGG | + | Chr1:8442516-8442535 | None:intergenic | 50.0% |
AAGCCAACGACAGTTCCGTC+TGG | + | Chr1:8444250-8444269 | None:intergenic | 55.0% | |
AGCCAACGACAGTTCCGTCT+GGG | + | Chr1:8444249-8444268 | None:intergenic | 55.0% | |
ATGGCGTCGTAAAAGGGGAG+GGG | - | Chr1:8444591-8444610 | MsG0180000597.01.T01:CDS | 55.0% | |
ATGGGAGAAGGAAGGCCACT+TGG | + | Chr1:8443467-8443486 | None:intergenic | 55.0% | |
CAACACAAGGACTTCCCAGG+AGG | + | Chr1:8441818-8441837 | None:intergenic | 55.0% | |
CACCGAGTGGTTCCTCTCAA+AGG | - | Chr1:8444150-8444169 | MsG0180000597.01.T01:CDS | 55.0% | |
CATGGACTTGCGCGATTGGT+CGG | + | Chr1:8442542-8442561 | None:intergenic | 55.0% | |
CCATGGCAACACAACATGGG+GGG | - | Chr1:8444956-8444975 | MsG0180000597.01.T01:five_prime_UTR | 55.0% | |
CCCATGGCAACACAACATGG+GGG | - | Chr1:8444955-8444974 | MsG0180000597.01.T01:five_prime_UTR | 55.0% | |
CCCCCATGTTGTGTTGCCAT+GGG | + | Chr1:8444958-8444977 | None:intergenic | 55.0% | |
CGAATTGGTCGAGGACCCTT+TGG | - | Chr1:8442593-8442612 | MsG0180000597.01.T01:CDS | 55.0% | |
GAATGGCGTCGTAAAAGGGG+AGG | - | Chr1:8444589-8444608 | MsG0180000597.01.T01:CDS | 55.0% | |
GTGCAACACAAGGACTTCCC+AGG | + | Chr1:8441821-8441840 | None:intergenic | 55.0% | |
TGGCAGGTATGGGATCGATC+TGG | - | Chr1:8443088-8443107 | MsG0180000597.01.T01:intron | 55.0% | |
TGGGAGAAGGAAGGCCACTT+GGG | + | Chr1:8443466-8443485 | None:intergenic | 55.0% | |
! | CTTCAGCACCGAATTGGTCG+AGG | - | Chr1:8442584-8442603 | MsG0180000597.01.T01:CDS | 55.0% |
! | GCATGAGTTGGGAGGCTTTC+TGG | + | Chr1:8444206-8444225 | None:intergenic | 55.0% |
! | GGGCTGCAAACTCTCTGGAA+TGG | - | Chr1:8444481-8444500 | MsG0180000597.01.T01:CDS | 55.0% |
! | TCTGCGTGGGCCAGTTTGTT+AGG | - | Chr1:8444536-8444555 | MsG0180000597.01.T01:CDS | 55.0% |
!! | AGGAAAAGCACTCACCGGTG+GGG | - | Chr1:8444407-8444426 | MsG0180000597.01.T01:CDS | 55.0% |
AACCTCGGAAGGATCGGCCA+AGG | + | Chr1:8444709-8444728 | None:intergenic | 60.0% | |
ATGGCCTGGCAGCTGGTGAT+TGG | - | Chr1:8444365-8444384 | MsG0180000597.01.T01:CDS | 60.0% | |
CCCCCCATGTTGTGTTGCCA+TGG | + | Chr1:8444959-8444978 | None:intergenic | 60.0% | |
CGACCAATCGCGCAAGTCCA+TGG | - | Chr1:8442540-8442559 | MsG0180000597.01.T01:CDS | 60.0% | |
GACATAGGGCCTCTGACCTC+TGG | + | Chr1:8443314-8443333 | None:intergenic | 60.0% | |
GTACCCAATCACCAGCTGCC+AGG | + | Chr1:8444372-8444391 | None:intergenic | 60.0% | |
GTCCCAGACGGAACTGTCGT+TGG | - | Chr1:8444244-8444263 | MsG0180000597.01.T01:intron | 60.0% | |
TGAACGCGTCACGAATGGCC+TGG | - | Chr1:8444351-8444370 | MsG0180000597.01.T01:CDS | 60.0% | |
TGGCCTGGCAGCTGGTGATT+GGG | - | Chr1:8444366-8444385 | MsG0180000597.01.T01:CDS | 60.0% | |
!! | GCAGCACTGACTACACCGAG+TGG | - | Chr1:8444137-8444156 | MsG0180000597.01.T01:CDS | 60.0% |
CACCTTGGCCGATCCTTCCG+AGG | - | Chr1:8444704-8444723 | MsG0180000597.01.T01:five_prime_UTR | 65.0% | |
GAGGGGCCTCTGCTACTGGT+AGG | - | Chr1:8444608-8444627 | MsG0180000597.01.T01:CDS | 65.0% | |
GTCACGAATGGCCTGGCAGC+TGG | - | Chr1:8444358-8444377 | MsG0180000597.01.T01:CDS | 65.0% | |
AGGGGAGGGGCCTCTGCTAC+TGG | - | Chr1:8444604-8444623 | MsG0180000597.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 8441803 | 8445319 | 8441803 | ID=MsG0180000597.01;Name=MsG0180000597.01 |
Chr1 | mRNA | 8441803 | 8445319 | 8441803 | ID=MsG0180000597.01.T01;Parent=MsG0180000597.01;Name=MsG0180000597.01.T01;_AED=0.48;_eAED=0.48;_QI=616|0.66|0.75|1|1|1|4|635|508 |
Chr1 | exon | 8444311 | 8445319 | 8444311 | ID=MsG0180000597.01.T01:exon:2444;Parent=MsG0180000597.01.T01 |
Chr1 | exon | 8444125 | 8444216 | 8444125 | ID=MsG0180000597.01.T01:exon:2445;Parent=MsG0180000597.01.T01 |
Chr1 | exon | 8443609 | 8444028 | 8443609 | ID=MsG0180000597.01.T01:exon:2446;Parent=MsG0180000597.01.T01 |
Chr1 | exon | 8441803 | 8443059 | 8441803 | ID=MsG0180000597.01.T01:exon:2447;Parent=MsG0180000597.01.T01 |
Chr1 | five_prime_UTR | 8444704 | 8445319 | 8444704 | ID=MsG0180000597.01.T01:five_prime_utr;Parent=MsG0180000597.01.T01 |
Chr1 | CDS | 8444311 | 8444703 | 8444311 | ID=MsG0180000597.01.T01:cds;Parent=MsG0180000597.01.T01 |
Chr1 | CDS | 8444125 | 8444216 | 8444125 | ID=MsG0180000597.01.T01:cds;Parent=MsG0180000597.01.T01 |
Chr1 | CDS | 8443609 | 8444028 | 8443609 | ID=MsG0180000597.01.T01:cds;Parent=MsG0180000597.01.T01 |
Chr1 | CDS | 8442438 | 8443059 | 8442438 | ID=MsG0180000597.01.T01:cds;Parent=MsG0180000597.01.T01 |
Chr1 | three_prime_UTR | 8441803 | 8442437 | 8441803 | ID=MsG0180000597.01.T01:three_prime_utr;Parent=MsG0180000597.01.T01 |
Gene Sequence |
Protein sequence |