AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016556.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016556.01.T01 MTR_3g091860 96.996 233 2 1 1 233 1 228 2.51e-167 460
MsG0380016556.01.T01 MTR_3g091860 96.517 201 2 1 1 201 1 196 7.01e-142 397
MsG0380016556.01.T01 MTR_1g099190 45.489 266 98 15 1 233 1 252 1.81e-54 175
MsG0380016556.01.T01 MTR_6g034835 43.529 255 110 11 1 230 1 246 2.50e-52 170
MsG0380016556.01.T01 MTR_1g099190 39.216 204 79 13 1 173 1 190 8.97e-27 102
MsG0380016556.01.T01 MTR_3g104670 42.446 139 58 4 102 224 90 222 1.19e-26 103
MsG0380016556.01.T01 MTR_3g104670 41.176 119 48 4 102 204 90 202 1.56e-19 84.0
MsG0380016556.01.T01 MTR_1g099190 36.464 181 75 12 1 150 1 172 7.15e-18 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016556.01.T01 AT1G76940 42.213 244 119 7 1 233 1 233 8.44e-49 160
MsG0380016556.01.T01 AT1G21320 39.922 258 125 7 1 233 1 253 2.02e-47 157
MsG0380016556.01.T01 AT1G21320 42.326 215 102 5 36 233 1 210 1.39e-42 144
MsG0380016556.01.T01 AT1G21320 42.130 216 103 5 35 233 46 256 8.28e-42 143
MsG0380016556.01.T01 AT1G76940 42.489 233 80 9 1 233 1 179 1.92e-41 139
MsG0380016556.01.T01 AT1G21320 42.130 216 103 5 35 233 211 421 1.06e-40 144
MsG0380016556.01.T01 AT1G76940 34.884 172 96 5 1 161 1 167 3.61e-18 79.3
MsG0380016556.01.T01 AT1G21320 34.507 142 76 4 35 159 211 352 2.89e-14 71.2

Find 112 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTCATGTCTGACGCTTAT+TGG 0.193305 3:+85099301 MsG0380016556.01.T01:exon
AAAATTTGGTAAGTTGGTTT+TGG 0.215497 3:-85105748 None:intergenic
TTACTGCTCCTGCGAATATC+TGG 0.257879 3:+85105586 MsG0380016556.01.T01:three_prime_UTR
ACCGCAACTCGGTCAATTTA+CGG 0.265379 3:+85105144 MsG0380016556.01.T01:CDS
GTCAGTACGGGGACGTTTGC+CGG 0.281742 3:-85099364 None:intergenic
ATGTAGGAATCGCGCGTATT+GGG 0.293682 3:+85105350 MsG0380016556.01.T01:intron
TGATTCTCATGTCACAAGTA+TGG 0.302346 3:+85103642 MsG0380016556.01.T01:CDS
CACCACTTAATTCCAGGATT+TGG 0.309261 3:-85103696 None:intergenic
GCCTTCCACCACTTAATTCC+AGG 0.321168 3:-85103702 None:intergenic
TTTCTCTGAATTGTCTTGTT+TGG 0.333795 3:+85105539 MsG0380016556.01.T01:three_prime_UTR
GCAGATTTCATCTCATGGTT+CGG 0.343063 3:+85103570 MsG0380016556.01.T01:intron
CAGATTTCATCTCATGGTTC+GGG 0.373471 3:+85103571 MsG0380016556.01.T01:intron
ACGTTTGCCGGGGATGGTAG+GGG 0.374467 3:-85099352 None:intergenic
TATGTAGGAATCGCGCGTAT+TGG 0.380255 3:+85105349 MsG0380016556.01.T01:intron
GGACGTTTGCCGGGGATGGT+AGG 0.394051 3:-85099354 None:intergenic
GACGTTTGCCGGGGATGGTA+GGG 0.408483 3:-85099353 None:intergenic
TTCCAATTCGCTCGCAACCC+TGG 0.411050 3:+85105167 MsG0380016556.01.T01:CDS
ATTACGGAGGTAACGCTCAT+AGG 0.414276 3:-85103037 None:intergenic
GCTCGCAACCCTGGGAGGTC+AGG 0.419951 3:+85105176 MsG0380016556.01.T01:CDS
AGAATCATCAATAGAATGAC+TGG 0.421510 3:-85103626 None:intergenic
AACCCTGGGAGGTCAGGTGG+CGG 0.429538 3:+85105182 MsG0380016556.01.T01:CDS
TGGTATAGTTTGTTTCTTGA+AGG 0.437352 3:+85105559 MsG0380016556.01.T01:three_prime_UTR
TCAGTACGGGGACGTTTGCC+GGG 0.438662 3:-85099363 None:intergenic
TCCCAGGGTTGCGAGCGAAT+TGG 0.438678 3:-85105169 None:intergenic
CGTTTGCCGGGGATGGTAGG+GGG 0.445448 3:-85099351 None:intergenic
ATTCGGTATCTCTAATTACT+TGG 0.450640 3:-85103002 None:intergenic
TGTCTCGGGCGTTCATAACT+TGG 0.451494 3:+85102942 MsG0380016556.01.T01:CDS
ATGCTCACTACAAACATGTA+TGG 0.452235 3:-85105628 None:intergenic
GTAGCCCGTATCCTTTCATC+TGG 0.464420 3:+85103802 MsG0380016556.01.T01:CDS
ACTTCTTTGTAGCCAACAAA+AGG 0.466417 3:-85103901 None:intergenic
GGGAGCGTGCTGCTGAGATT+CGG 0.469974 3:-85099331 None:intergenic
TCCAATTCGCTCGCAACCCT+GGG 0.472195 3:+85105168 MsG0380016556.01.T01:CDS
CGTTGAATTATGCATTCTAC+AGG 0.475820 3:+85105218 MsG0380016556.01.T01:exon
ATGGCAGTTGCTGCATGAGC+CGG 0.479544 3:-85104067 None:intergenic
AAACGGAGACAAATCGAGAT+AGG 0.482583 3:+85099148 None:intergenic
TGCTACCAATACACTATTTG+TGG 0.482749 3:+85103747 MsG0380016556.01.T01:CDS
TACTGCTCCTGCGAATATCT+GGG 0.485124 3:+85105587 MsG0380016556.01.T01:three_prime_UTR
TTGCTGCAGATTTCATCTCA+TGG 0.485693 3:+85103565 MsG0380016556.01.T01:intron
TGCCCGCCACCTGACCTCCC+AGG 0.486471 3:-85105185 None:intergenic
AAATAATTAATACCGCATTA+CGG 0.491279 3:-85103053 None:intergenic
GAATTACAATTGCTTTCGTT+AGG 0.493387 3:+85105416 MsG0380016556.01.T01:three_prime_UTR
ACCCTCCACAAATAGTGTAT+TGG 0.494925 3:-85103752 None:intergenic
CAGTCTACTAGAACCATTGA+TGG 0.495884 3:+85103595 MsG0380016556.01.T01:CDS
ACCCTGGGAGGTCAGGTGGC+GGG 0.496699 3:+85105183 MsG0380016556.01.T01:CDS
CCTAGCAAACGAATTTCAAA+AGG 0.496878 3:-85105450 None:intergenic
TTTCCCCACGACGATGATAG+AGG 0.497115 3:+85102973 MsG0380016556.01.T01:CDS
GATTCTCATGTCACAAGTAT+GGG 0.497759 3:+85103643 MsG0380016556.01.T01:CDS
ATAGGATGCATCAAGGGATT+CGG 0.501338 3:-85103019 None:intergenic
ACGGGGACGTTTGCCGGGGA+TGG 0.501626 3:-85099358 None:intergenic
GTTGTGTTTCTGTTGAGTTA+AGG 0.504818 3:+85099200 MsG0380016556.01.T01:five_prime_UTR
CTGAATACCGTAGTCAGTAC+GGG 0.508975 3:-85099376 None:intergenic
GTAATTCTCGACTGAAAGGC+TGG 0.514181 3:-85105400 None:intergenic
ACTGAATACCGTAGTCAGTA+CGG 0.515403 3:-85099377 None:intergenic
TAATAGTCATCTAACAACTT+AGG 0.517774 3:-85105679 None:intergenic
GGTAACCAGATGAAAGGATA+CGG 0.524149 3:-85103807 None:intergenic
AAATGTAAAAGACCAAATCC+TGG 0.525445 3:+85103684 MsG0380016556.01.T01:CDS
CCAGGTGGAAGTGAATGGTC+AGG 0.532724 3:-85103724 None:intergenic
CGCAACCCTGGGAGGTCAGG+TGG 0.536874 3:+85105179 MsG0380016556.01.T01:CDS
GCCCGCCACCTGACCTCCCA+GGG 0.537819 3:-85105184 None:intergenic
AGCGTCAGACATGACGGTGT+TGG 0.542130 3:-85099295 None:intergenic
TGTAGGAATCGCGCGTATTG+GGG 0.542727 3:+85105351 MsG0380016556.01.T01:intron
AGGTCAGGTGGCGGGCATCG+TGG 0.543236 3:+85105191 MsG0380016556.01.T01:CDS
TAGCACCAGGTGGAAGTGAA+TGG 0.546132 3:-85103729 None:intergenic
GGCTCATGCAGCAACTGCCA+TGG 0.546144 3:+85104069 MsG0380016556.01.T01:CDS
ATTACCATGCAATGCATCCA+TGG 0.548719 3:-85104086 None:intergenic
AATTGTAATTCTCGACTGAA+AGG 0.553922 3:-85105404 None:intergenic
CCTTCCTCTATCATCGTCGT+GGG 0.554327 3:-85102977 None:intergenic
AGTCTACTAGAACCATTGAT+GGG 0.560461 3:+85103596 MsG0380016556.01.T01:CDS
TACTTCGCGTCTTGTACAGT+TGG 0.562365 3:-85103782 None:intergenic
GCCTTCCTCTATCATCGTCG+TGG 0.562600 3:-85102978 None:intergenic
AAACGTCCCCGTACTGACTA+CGG 0.563243 3:+85099369 MsG0380016556.01.T01:CDS
ACCAATACACTATTTGTGGA+GGG 0.567944 3:+85103751 MsG0380016556.01.T01:CDS
GGGGAGGTTGTGTTTGTGAG+AGG 0.568048 3:+85105370 MsG0380016556.01.T01:three_prime_UTR
GACCAAATCCTGGAATTAAG+TGG 0.568245 3:+85103694 MsG0380016556.01.T01:CDS
TGTTAGATGACTATTAATTG+TGG 0.576198 3:+85105686 MsG0380016556.01.T01:three_prime_UTR
AACGCTCATAGGATGCATCA+AGG 0.578292 3:-85103026 None:intergenic
CTTACCTCCCAGATATTCGC+AGG 0.587821 3:-85105594 None:intergenic
TCGCGTCTTGTACAGTTGGA+AGG 0.592466 3:-85103778 None:intergenic
CCTGACCATTCACTTCCACC+TGG 0.598787 3:+85103724 MsG0380016556.01.T01:CDS
TCCTGGAATTAAGTGGTGGA+AGG 0.599053 3:+85103701 MsG0380016556.01.T01:CDS
TGTCAGCAAGGAATCAAGAC+AGG 0.599053 3:+85103930 MsG0380016556.01.T01:CDS
ATTCTCATGTCACAAGTATG+GGG 0.599732 3:+85103644 MsG0380016556.01.T01:CDS
GTAACCAGATGAAAGGATAC+GGG 0.604596 3:-85103806 None:intergenic
TACCAATACACTATTTGTGG+AGG 0.606235 3:+85103750 MsG0380016556.01.T01:CDS
ACTAAGGGTAACCAGATGAA+AGG 0.608961 3:-85103813 None:intergenic
CCAATAAGCGTCAGACATGA+CGG 0.612476 3:-85099301 None:intergenic
AGAAGTTAGACTTGTCAGCA+AGG 0.615035 3:+85103918 MsG0380016556.01.T01:CDS
AGGAATCGCGCGTATTGGGG+AGG 0.615754 3:+85105354 MsG0380016556.01.T01:intron
TGGGATTATGTGCAGCCTGG+GGG 0.617426 3:+85104007 MsG0380016556.01.T01:intron
CAGTACGGGGACGTTTGCCG+GGG 0.621369 3:-85099362 None:intergenic
ACCGTAAATTGACCGAGTTG+CGG 0.624559 3:-85105145 None:intergenic
TGATGAGCTTGACCGCAACT+CGG 0.625250 3:+85105133 MsG0380016556.01.T01:CDS
CCCACGACGATGATAGAGGA+AGG 0.628399 3:+85102977 MsG0380016556.01.T01:CDS
AGTTAGATTGTGAATACGAA+TGG 0.632662 3:-85099253 None:intergenic
TTCTCATGTCACAAGTATGG+GGG 0.635726 3:+85103645 MsG0380016556.01.T01:CDS
GTCTACTAGAACCATTGATG+GGG 0.636718 3:+85103597 MsG0380016556.01.T01:CDS
TCAACAAAACAAAGTAACAG+TGG 0.640494 3:-85104034 None:intergenic
ACGCTCATAGGATGCATCAA+GGG 0.644974 3:-85103025 None:intergenic
AATAGTGTATTGGTAGCACC+AGG 0.647665 3:-85103742 None:intergenic
TGAGCGTTACCTCCGTAATG+CGG 0.655465 3:+85103041 MsG0380016556.01.T01:CDS
AATTCGCTCGCAACCCTGGG+AGG 0.657729 3:+85105171 MsG0380016556.01.T01:CDS
CAAATCCTGGAATTAAGTGG+TGG 0.659162 3:+85103697 MsG0380016556.01.T01:CDS
GAATCATCAATAGAATGACT+GGG 0.666778 3:-85103625 None:intergenic
TCTCATGTCACAAGTATGGG+GGG 0.667031 3:+85103646 MsG0380016556.01.T01:CDS
ACTGCCATGGATGCATTGCA+TGG 0.674544 3:+85104082 MsG0380016556.01.T01:CDS
AGTGTATTGGTAGCACCAGG+TGG 0.684914 3:-85103739 None:intergenic
CTTCCTCTATCATCGTCGTG+GGG 0.700696 3:-85102976 None:intergenic
TCTACTAGAACCATTGATGG+GGG 0.713611 3:+85103598 MsG0380016556.01.T01:CDS
TGTTCGTTCAAGTCTACACG+AGG 0.716661 3:-85099228 None:intergenic
TGCTCCTGCGAATATCTGGG+AGG 0.720617 3:+85105590 MsG0380016556.01.T01:three_prime_UTR
TAATTAATACCGCATTACGG+AGG 0.728809 3:-85103050 None:intergenic
TGAATACCGTAGTCAGTACG+GGG 0.745232 3:-85099375 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTATAAATTAAA+AGG + Chr3:85101117-85101136 MsG0380016556.01.T01:intron 0.0%
!! AAAAAAAAAAAATATTACAG+GGG - Chr3:85099978-85099997 None:intergenic 10.0%
!! AATTTCTTGAAAAAAAAATT+TGG - Chr3:85100070-85100089 None:intergenic 10.0%
!!! AATCAAAAAATTATTTTACA+GGG + Chr3:85100102-85100121 MsG0380016556.01.T01:intron 10.0%
!!! TTTTTTTATTTAAGGTTAAT+AGG + Chr3:85099946-85099965 MsG0380016556.01.T01:intron 10.0%
!!! TTTTTTTTTTCTTCAATTTA+GGG + Chr3:85099426-85099445 MsG0380016556.01.T01:intron 10.0%
!!! TTTTTTTTTTTCTTCAATTT+AGG + Chr3:85099425-85099444 MsG0380016556.01.T01:intron 10.0%
!! AAAAAAATAAGATTTGATGT+GGG + Chr3:85101710-85101729 MsG0380016556.01.T01:intron 15.0%
!! AAATAAAATAAAGGGTTAAT+AGG - Chr3:85100164-85100183 None:intergenic 15.0%
!! AATTAAAACTTCAATTTGAA+TGG + Chr3:85105296-85105315 MsG0380016556.01.T01:intron 15.0%
!! AGTATTTGATTAATGTATTT+GGG + Chr3:85101934-85101953 MsG0380016556.01.T01:intron 15.0%
!! ATAATTTGGAAATATCAAAA+TGG - Chr3:85104598-85104617 None:intergenic 15.0%
!! ATTGTGCATTAATATAAATA+AGG + Chr3:85099834-85099853 MsG0380016556.01.T01:intron 15.0%
!! ATTTATTCAATTGCATTATA+TGG - Chr3:85101513-85101532 None:intergenic 15.0%
!! GAAATGATATAAAGAAATTA+TGG + Chr3:85104406-85104425 MsG0380016556.01.T01:intron 15.0%
!! GTAAGTTTGAAAAATAAATA+GGG - Chr3:85102686-85102705 None:intergenic 15.0%
!! TGTTAAAACATATTACATAT+GGG + Chr3:85100933-85100952 MsG0380016556.01.T01:intron 15.0%
!! TTGTTAAAACATATTACATA+TGG + Chr3:85100932-85100951 MsG0380016556.01.T01:intron 15.0%
!!! AAAAAAAATTTGGTTTTGTT+TGG - Chr3:85100060-85100079 None:intergenic 15.0%
!!! ATCAAAACAAATTTTTTTAC+AGG - Chr3:85100022-85100041 None:intergenic 15.0%
!!! ATTTTGATATTTCCAAATTA+TGG + Chr3:85104597-85104616 MsG0380016556.01.T01:intron 15.0%
!!! GAATCAAAAAATTATTTTAC+AGG + Chr3:85100101-85100120 MsG0380016556.01.T01:intron 15.0%
!!! TAAACAAAACTATATGTTTT+AGG + Chr3:85103525-85103544 MsG0380016556.01.T01:intron 15.0%
!!! TCAAAACAAATTTTTTTACA+GGG - Chr3:85100021-85100040 None:intergenic 15.0%
!!! TTTTTTTCAAGAAATTTACA+GGG + Chr3:85100074-85100093 MsG0380016556.01.T01:intron 15.0%
!!! TTTTTTTTCAAGAAATTTAC+AGG + Chr3:85100073-85100092 MsG0380016556.01.T01:intron 15.0%
!! AAATAATTAATACCGCATTA+CGG - Chr3:85103056-85103075 None:intergenic 20.0%
!! AAATTTGATGCATATGATAA+TGG + Chr3:85102022-85102041 MsG0380016556.01.T01:intron 20.0%
!! AAGCAGACAAAATAAAATAA+AGG - Chr3:85100173-85100192 None:intergenic 20.0%
!! AATAAGTAAAGGCTATTAAT+TGG - Chr3:85101338-85101357 None:intergenic 20.0%
!! ACGATTTATTCAATAAGTAA+AGG - Chr3:85101349-85101368 None:intergenic 20.0%
!! AGCAGACAAAATAAAATAAA+GGG - Chr3:85100172-85100191 None:intergenic 20.0%
!! ATAGATACTTAAACTATAGT+AGG + Chr3:85104768-85104787 MsG0380016556.01.T01:intron 20.0%
!! CAGTTTCAAATTCAAAATTA+TGG + Chr3:85102811-85102830 MsG0380016556.01.T01:intron 20.0%
!! GAAAAAAATAAGATTTGATG+TGG + Chr3:85101709-85101728 MsG0380016556.01.T01:intron 20.0%
!! GAAGAAAAAAAAAAAGTGAA+GGG - Chr3:85099420-85099439 None:intergenic 20.0%
!! GAATGAAAAATGATAACTAT+GGG - Chr3:85099461-85099480 None:intergenic 20.0%
!! GAGTATTTGATTAATGTATT+TGG + Chr3:85101933-85101952 MsG0380016556.01.T01:intron 20.0%
!! GATAAGAAAATATATTCACA+CGG - Chr3:85104554-85104573 None:intergenic 20.0%
!! GGTAAGTTTGAAAAATAAAT+AGG - Chr3:85102687-85102706 None:intergenic 20.0%
!! TAAAATCTTCTTTCAAGAAA+GGG - Chr3:85103333-85103352 None:intergenic 20.0%
!! TGAAGAAAAAAAAAAAGTGA+AGG - Chr3:85099421-85099440 None:intergenic 20.0%
!! TTTCAAAGGTGAAAAATAAT+AGG - Chr3:85102326-85102345 None:intergenic 20.0%
!!! AAGAAGATTTTAGAAAAATG+TGG + Chr3:85103341-85103360 MsG0380016556.01.T01:intron 20.0%
!!! AGAAGATTTTAGAAAAATGT+GGG + Chr3:85103342-85103361 MsG0380016556.01.T01:intron 20.0%
!!! ATTGATAGTAATTAGTAAGT+AGG + Chr3:85101599-85101618 MsG0380016556.01.T01:intron 20.0%
!!! CAAAACAAATTTTTTTACAG+GGG - Chr3:85100020-85100039 None:intergenic 20.0%
!!! CAATCTATTTTTTTTGTTGA+GGG + Chr3:85102251-85102270 MsG0380016556.01.T01:intron 20.0%
!!! TATTTTGAAAATTTATGGCA+AGG + Chr3:85104449-85104468 MsG0380016556.01.T01:intron 20.0%
!!! TATTTTTGCTTTTGTTGTTT+CGG - Chr3:85100334-85100353 None:intergenic 20.0%
!!! TTAATTGTGAACCATTTTTA+TGG + Chr3:85101957-85101976 MsG0380016556.01.T01:intron 20.0%
!!! TTTATATGAGTTGAAAGTTA+CGG + Chr3:85101184-85101203 MsG0380016556.01.T01:intron 20.0%
!!! TTTTTTCAAGAAATTTACAG+GGG + Chr3:85100075-85100094 MsG0380016556.01.T01:intron 20.0%
! AAAAAAGTGAAGGGTAAAAA+TGG - Chr3:85099411-85099430 None:intergenic 25.0%
! AAAACATATTACATATGGGT+TGG + Chr3:85100937-85100956 MsG0380016556.01.T01:intron 25.0%
! AAAATAGCTAGCACAATAAA+AGG - Chr3:85101279-85101298 None:intergenic 25.0%
! AACAGATAATTGGTCATTTA+AGG - Chr3:85103086-85103105 None:intergenic 25.0%
! AATATCTATACAGTGTGTTA+AGG - Chr3:85103875-85103894 None:intergenic 25.0%
! ACTGTTCAAACTAGATATAT+AGG - Chr3:85101865-85101884 None:intergenic 25.0%
! AGAAAACAAGAACAGATAAT+TGG - Chr3:85103096-85103115 None:intergenic 25.0%
! AGTATTCATATACATAGCAA+CGG - Chr3:85103179-85103198 None:intergenic 25.0%
! ATAAAGACATGAGAATTTGT+TGG + Chr3:85102449-85102468 MsG0380016556.01.T01:intron 25.0%
! ATAAATAGGGAAAAACCATT+TGG - Chr3:85102673-85102692 None:intergenic 25.0%
! ATGTTAAGAATTCTTGATCT+GGG + Chr3:85099738-85099757 MsG0380016556.01.T01:intron 25.0%
! ATTGCAACATTAGAAAAGTT+GGG - Chr3:85102099-85102118 None:intergenic 25.0%
! ATTTCCACAACCAAAAAATA+AGG - Chr3:85101245-85101264 None:intergenic 25.0%
! ATTTGTAACCTGCAAAATTA+AGG - Chr3:85105112-85105131 None:intergenic 25.0%
! CATTACAAGGATAAAAGAAA+AGG - Chr3:85104116-85104135 None:intergenic 25.0%
! CGAATGAAAAATGATAACTA+TGG - Chr3:85099462-85099481 None:intergenic 25.0%
! CTAAAATCTTCTTTCAAGAA+AGG - Chr3:85103334-85103353 None:intergenic 25.0%
! CTTATAAGAGTTGAAAGTTA+GGG - Chr3:85100255-85100274 None:intergenic 25.0%
! GAGATTGAAAGTAATATAGT+TGG + Chr3:85102123-85102142 MsG0380016556.01.T01:intron 25.0%
! GATATAAAGAAATTATGGCA+AGG + Chr3:85104411-85104430 MsG0380016556.01.T01:intron 25.0%
! GTAAAACGAAAATTCTATGT+AGG + Chr3:85105334-85105353 MsG0380016556.01.T01:intron 25.0%
! TAATAGTCATCTAACAACTT+AGG - Chr3:85105682-85105701 None:intergenic 25.0%
! TGTTAGATGACTATTAATTG+TGG + Chr3:85105686-85105705 MsG0380016556.01.T01:three_prime_UTR 25.0%
! TTAAAATAACTCGACATGAA+AGG - Chr3:85104742-85104761 None:intergenic 25.0%
! TTCAAAATTATGGCATTGTT+AGG + Chr3:85102821-85102840 MsG0380016556.01.T01:intron 25.0%
! TTGATATTTCCAAATTATGG+AGG + Chr3:85104600-85104619 MsG0380016556.01.T01:intron 25.0%
! TTGTTAAAGGGGTTTATTTA+TGG + Chr3:85100907-85100926 MsG0380016556.01.T01:intron 25.0%
! TTTACAGAGAAAAAAAGACA+TGG - Chr3:85100309-85100328 None:intergenic 25.0%
! TTTGGAAATATCAAAATGGA+TGG - Chr3:85104594-85104613 None:intergenic 25.0%
!! AAAGTAATATAGTTGGTATC+AGG + Chr3:85102130-85102149 MsG0380016556.01.T01:intron 25.0%
!! ATACCACCTTTTATAGAAAA+TGG - Chr3:85101551-85101570 None:intergenic 25.0%
!! ATTTTCTATAAAAGGTGGTA+TGG + Chr3:85101550-85101569 MsG0380016556.01.T01:intron 25.0%
!! CAGTTATCATAACTGATTTA+CGG + Chr3:85102424-85102443 MsG0380016556.01.T01:intron 25.0%
!! GTTTTTGCTAAACATTAACA+TGG - Chr3:85102182-85102201 None:intergenic 25.0%
!! TAATTAAGCCTTCTTTGTTT+CGG + Chr3:85104681-85104700 MsG0380016556.01.T01:intron 25.0%
!! TTAGCAAAAACAAGCTTTTA+GGG + Chr3:85102191-85102210 MsG0380016556.01.T01:intron 25.0%
!! TTTAGCAAAAACAAGCTTTT+AGG + Chr3:85102190-85102209 MsG0380016556.01.T01:intron 25.0%
!!! AATTATTTTACAGGGAAAAC+CGG + Chr3:85100110-85100129 MsG0380016556.01.T01:intron 25.0%
!!! AGTGTTTACTTGTTTTAATC+TGG + Chr3:85099787-85099806 MsG0380016556.01.T01:intron 25.0%
!!! ATATAGGAGTATCTTTTTGA+GGG - Chr3:85101849-85101868 None:intergenic 25.0%
!!! GCAATCTATTTTTTTTGTTG+AGG + Chr3:85102250-85102269 MsG0380016556.01.T01:intron 25.0%
!!! GGTTTTGTTTCATATTTTAG+TGG - Chr3:85100509-85100528 None:intergenic 25.0%
!!! GTTTATTTTGTTTTAAGCTG+AGG + Chr3:85104996-85105015 MsG0380016556.01.T01:intron 25.0%
!!! GTTTTGGAAAATCTTTCATT+TGG + Chr3:85102749-85102768 MsG0380016556.01.T01:intron 25.0%
!!! TATATAGGAGTATCTTTTTG+AGG - Chr3:85101850-85101869 None:intergenic 25.0%
!!! TGCTGTAAATATTTTTTTCC+TGG + Chr3:85104209-85104228 MsG0380016556.01.T01:intron 25.0%
!!! TTATTGTGCTAGCTATTTTT+TGG + Chr3:85101280-85101299 MsG0380016556.01.T01:intron 25.0%
!!! TTTTGTTGATTTTGTAAGTC+CGG + Chr3:85104048-85104067 MsG0380016556.01.T01:CDS 25.0%
!!! TTTTTCAAGAAATTTACAGG+GGG + Chr3:85100076-85100095 MsG0380016556.01.T01:intron 25.0%
AAAAAATCAACATGCCGAAT+AGG - Chr3:85103124-85103143 None:intergenic 30.0%
AAAAATACATGTTTCTCCCT+CGG + Chr3:85100347-85100366 MsG0380016556.01.T01:intron 30.0%
AAAAATCAACATGCCGAATA+GGG - Chr3:85103123-85103142 None:intergenic 30.0%
AAAACAGTGAAAATCACGAA+TGG - Chr3:85099570-85099589 None:intergenic 30.0%
AAAACTAGAAATAGACTGCA+GGG + Chr3:85102476-85102495 MsG0380016556.01.T01:intron 30.0%
AAACAGTGAAAATCACGAAT+GGG - Chr3:85099569-85099588 None:intergenic 30.0%
AAAGACAAAAACAAGATGAC+AGG - Chr3:85101447-85101466 None:intergenic 30.0%
AAATGTAAAAGACCAAATCC+TGG + Chr3:85103684-85103703 MsG0380016556.01.T01:CDS 30.0%
AAATTTATGGCAAGGATACT+AGG + Chr3:85104457-85104476 MsG0380016556.01.T01:intron 30.0%
AACTCTTATAAGCTATCACA+TGG + Chr3:85100263-85100282 MsG0380016556.01.T01:intron 30.0%
AAGACAAAAACAAGATGACA+GGG - Chr3:85101446-85101465 None:intergenic 30.0%
AATATGTGTGTACAAGACAA+AGG + Chr3:85100608-85100627 MsG0380016556.01.T01:intron 30.0%
AATTAAAAGGTAAAGCCAGA+TGG + Chr3:85101130-85101149 MsG0380016556.01.T01:intron 30.0%
AATTGTAATTCTCGACTGAA+AGG - Chr3:85105407-85105426 None:intergenic 30.0%
ACAACCAAAAAATAAGGATC+CGG - Chr3:85101239-85101258 None:intergenic 30.0%
AGAATCATCAATAGAATGAC+TGG - Chr3:85103629-85103648 None:intergenic 30.0%
AGACACAGTGCATAAAAATT+TGG - Chr3:85100475-85100494 None:intergenic 30.0%
AGTAAACTTTACATGAGTCA+TGG + Chr3:85101677-85101696 MsG0380016556.01.T01:intron 30.0%
AGTTAGATTGTGAATACGAA+TGG - Chr3:85099256-85099275 None:intergenic 30.0%
ATAATGCTCAAAGTTAATCG+TGG - Chr3:85100412-85100431 None:intergenic 30.0%
ATAATTGGTCATTTAAGGAC+AGG - Chr3:85103081-85103100 None:intergenic 30.0%
ATAATTTGAGCATGAGTCTA+AGG - Chr3:85103237-85103256 None:intergenic 30.0%
ATGCAATTGTCAAACTAAGT+TGG + Chr3:85099892-85099911 MsG0380016556.01.T01:intron 30.0%
ATGGATGGAAATTCAGAAAA+AGG - Chr3:85103417-85103436 None:intergenic 30.0%
ATTCGGTATCTCTAATTACT+TGG - Chr3:85103005-85103024 None:intergenic 30.0%
CAAATGATTAACTCTTCAAC+TGG - Chr3:85102055-85102074 None:intergenic 30.0%
CAATACAGATACCTATAACT+AGG - Chr3:85099691-85099710 None:intergenic 30.0%
CAGTGCATAAAAATTTGGAT+TGG - Chr3:85100470-85100489 None:intergenic 30.0%
CATGTTAAGAATTCTTGATC+TGG + Chr3:85099737-85099756 MsG0380016556.01.T01:intron 30.0%
CGTAAATCAGTTATGATAAC+TGG - Chr3:85102426-85102445 None:intergenic 30.0%
GAAGTATGTAATGCATATGT+TGG + Chr3:85100798-85100817 MsG0380016556.01.T01:intron 30.0%
GAATCATCAATAGAATGACT+GGG - Chr3:85103628-85103647 None:intergenic 30.0%
GAATTACAATTGCTTTCGTT+AGG + Chr3:85105416-85105435 MsG0380016556.01.T01:three_prime_UTR 30.0%
GATTGCAACATTAGAAAAGT+TGG - Chr3:85102100-85102119 None:intergenic 30.0%
GCTTATAAGAGTTGAAAGTT+AGG - Chr3:85100256-85100275 None:intergenic 30.0%
TAAAACTAGAAATAGACTGC+AGG + Chr3:85102475-85102494 MsG0380016556.01.T01:intron 30.0%
TAGGTATCTGTATTGTATTC+TGG + Chr3:85099696-85099715 MsG0380016556.01.T01:intron 30.0%
TATATTCACACGGTTAAACA+CGG - Chr3:85104544-85104563 None:intergenic 30.0%
TCAACAAAACAAAGTAACAG+TGG - Chr3:85104037-85104056 None:intergenic 30.0%
TGCAATTGTCAAACTAAGTT+GGG + Chr3:85099893-85099912 MsG0380016556.01.T01:intron 30.0%
TGCCTAATTATGTTTCGAAT+CGG + Chr3:85100200-85100219 MsG0380016556.01.T01:intron 30.0%
TTAACCTTGGAATTACTCTT+TGG + Chr3:85102153-85102172 MsG0380016556.01.T01:intron 30.0%
TTACATACTTCCATCCAAAA+AGG - Chr3:85100789-85100808 None:intergenic 30.0%
TTGACACAGATCCATAAAAA+TGG - Chr3:85101971-85101990 None:intergenic 30.0%
! AATAGGCTTAAATGCACTTT+TGG - Chr3:85102309-85102328 None:intergenic 30.0%
! AATTTTCCCCATTTCAATCT+CGG + Chr3:85099508-85099527 MsG0380016556.01.T01:intron 30.0%
! ACAATGAACCTTAATTTTGC+AGG + Chr3:85105101-85105120 MsG0380016556.01.T01:intron 30.0%
! ATAGGCTTAAATGCACTTTT+GGG - Chr3:85102308-85102327 None:intergenic 30.0%
! ATTGCACTTTTGCAAAGTTA+GGG - Chr3:85102235-85102254 None:intergenic 30.0%
! ATTTGGAGTCTTAGAATTTG+TGG - Chr3:85102656-85102675 None:intergenic 30.0%
! GAATTTGAAACTGTATGACT+TGG - Chr3:85102804-85102823 None:intergenic 30.0%
! GACAATTGCATTTTCATTGT+AGG - Chr3:85099883-85099902 None:intergenic 30.0%
! GATATTTTTCGTCCTTTTGT+TGG + Chr3:85103889-85103908 MsG0380016556.01.T01:intron 30.0%
! GATTTTCACTGTTTTGTACA+AGG + Chr3:85099575-85099594 MsG0380016556.01.T01:intron 30.0%
! GGTAATAACAGTGTGTATTT+TGG + Chr3:85104251-85104270 MsG0380016556.01.T01:intron 30.0%
! GGTCTTTTACATTTGTTCTT+CGG - Chr3:85103678-85103697 None:intergenic 30.0%
! TTGTTTTCTATAGCCCTATT+CGG + Chr3:85103107-85103126 MsG0380016556.01.T01:intron 30.0%
! TTTCTCTGAATTGTCTTGTT+TGG + Chr3:85105539-85105558 MsG0380016556.01.T01:three_prime_UTR 30.0%
!! AATGAAAACCAATGGACTAA+GGG - Chr3:85103831-85103850 None:intergenic 30.0%
!! ACAAATTCTAAGACTCCAAA+TGG + Chr3:85102655-85102674 MsG0380016556.01.T01:intron 30.0%
!! CTTAATTTTGAAGATGTCTC+GGG + Chr3:85102928-85102947 MsG0380016556.01.T01:intron 30.0%
!! GCTTAATTTTGAAGATGTCT+CGG + Chr3:85102927-85102946 MsG0380016556.01.T01:intron 30.0%
!! GGTGAAAATAGCTTGTTAAA+GGG + Chr3:85100895-85100914 MsG0380016556.01.T01:intron 30.0%
!! GTGAAAATAGCTTGTTAAAG+GGG + Chr3:85100896-85100915 MsG0380016556.01.T01:intron 30.0%
!! GTTATCATTTTTCATTCGCT+AGG + Chr3:85099464-85099483 MsG0380016556.01.T01:intron 30.0%
!! TAAACTTTCTGGTTAAGAGA+AGG - Chr3:85104896-85104915 None:intergenic 30.0%
!! TCTTTTTGAGGGAGATATAT+AGG - Chr3:85101838-85101857 None:intergenic 30.0%
!! TGGTATAGTTTGTTTCTTGA+AGG + Chr3:85105559-85105578 MsG0380016556.01.T01:three_prime_UTR 30.0%
!! TTTTCAAGAAATTTACAGGG+GGG + Chr3:85100077-85100096 MsG0380016556.01.T01:intron 30.0%
!!! ACACTGCCATTTTCTATAAA+AGG + Chr3:85101542-85101561 MsG0380016556.01.T01:intron 30.0%
!!! GCATTGATTGATTTTTGACT+GGG + Chr3:85103988-85104007 MsG0380016556.01.T01:intron 30.0%
!!! TGCATTGATTGATTTTTGAC+TGG + Chr3:85103987-85104006 MsG0380016556.01.T01:intron 30.0%
!!! TTCGGCATGTTGATTTTTTT+AGG + Chr3:85103125-85103144 MsG0380016556.01.T01:intron 30.0%
!!! TTTTGTTTTAAGCTGAGGTA+AGG + Chr3:85105001-85105020 MsG0380016556.01.T01:intron 30.0%
AAACCCAATATCCAACATAG+GGG - Chr3:85104953-85104972 None:intergenic 35.0%
AAATGGATGGCATTCATGAT+TGG - Chr3:85104581-85104600 None:intergenic 35.0%
AACTCTTACCAAATCAACAG+AGG - Chr3:85102521-85102540 None:intergenic 35.0%
AATGGATGGCATTCATGATT+GGG - Chr3:85104580-85104599 None:intergenic 35.0%
ACAAAGCTCGTGATCTTAAA+TGG - Chr3:85100534-85100553 None:intergenic 35.0%
ACCAATACACTATTTGTGGA+GGG + Chr3:85103751-85103770 MsG0380016556.01.T01:CDS 35.0%
ACCGGAACATGTGTTTATAA+AGG + Chr3:85102579-85102598 MsG0380016556.01.T01:intron 35.0%
ACGAAAGGGATTAAACTTTC+TGG - Chr3:85104907-85104926 None:intergenic 35.0%
ACTCTTACCAAATCAACAGA+GGG - Chr3:85102520-85102539 None:intergenic 35.0%
ACTGATAAGCGATGCATAAT+TGG + Chr3:85104336-85104355 MsG0380016556.01.T01:intron 35.0%
ACTGCTTAAGGATGTATATG+AGG - Chr3:85102709-85102728 None:intergenic 35.0%
ACTTCTTTGTAGCCAACAAA+AGG - Chr3:85103904-85103923 None:intergenic 35.0%
AGAAATCCCGAGATTGAAAT+GGG - Chr3:85099518-85099537 None:intergenic 35.0%
AGAAGAGAAAGACTGAAGAA+AGG - Chr3:85102891-85102910 None:intergenic 35.0%
AGACTATTTAACAGCGTGAA+CGG - Chr3:85105266-85105285 None:intergenic 35.0%
AGGAAGAATATGGAGTTTGT+GGG + Chr3:85101057-85101076 MsG0380016556.01.T01:intron 35.0%
AGTCGAATATGGTTCTCTAA+TGG + Chr3:85101020-85101039 MsG0380016556.01.T01:intron 35.0%
AGTCTACTAGAACCATTGAT+GGG + Chr3:85103596-85103615 MsG0380016556.01.T01:CDS 35.0%
ATACACAAATTACAGACGAG+TGG + Chr3:85100732-85100751 MsG0380016556.01.T01:intron 35.0%
ATACCTTCACTTAGTACGAA+AGG - Chr3:85104922-85104941 None:intergenic 35.0%
ATGCTCACTACAAACATGTA+TGG - Chr3:85105631-85105650 None:intergenic 35.0%
ATTCCCAATACGTGTACAAA+AGG - Chr3:85099657-85099676 None:intergenic 35.0%
ATTCTCATGTCACAAGTATG+GGG + Chr3:85103644-85103663 MsG0380016556.01.T01:CDS 35.0%
ATTTGATGTGGGCAATCTAT+TGG + Chr3:85101721-85101740 MsG0380016556.01.T01:intron 35.0%
CAAACCCAATATCCAACATA+GGG - Chr3:85104954-85104973 None:intergenic 35.0%
CAAAGAAGGCTTAATTAGTC+AGG - Chr3:85104678-85104697 None:intergenic 35.0%
CAAAGTCATATGTTGTTCTG+TGG - Chr3:85100636-85100655 None:intergenic 35.0%
CACATTGGATAAGAAATGAC+CGG + Chr3:85102561-85102580 MsG0380016556.01.T01:intron 35.0%
CACTAAAATCAGCTCATGAA+GGG - Chr3:85104185-85104204 None:intergenic 35.0%
CCCTTTATAAACACATGTTC+CGG - Chr3:85102583-85102602 None:intergenic 35.0%
CCGGAACATGTGTTTATAAA+GGG + Chr3:85102580-85102599 MsG0380016556.01.T01:intron 35.0%
CCTAGCAAACGAATTTCAAA+AGG - Chr3:85105453-85105472 None:intergenic 35.0%
CCTGTAATATAGGTCATTTC+CGG - Chr3:85100132-85100151 None:intergenic 35.0%
CGGAAATGACCTATATTACA+GGG + Chr3:85100130-85100149 MsG0380016556.01.T01:intron 35.0%
CGGAACATGTGTTTATAAAG+GGG + Chr3:85102581-85102600 MsG0380016556.01.T01:intron 35.0%
CGTTGAATTATGCATTCTAC+AGG + Chr3:85105218-85105237 MsG0380016556.01.T01:exon 35.0%
CTCATGTTGTTCCTAGTTAT+AGG + Chr3:85099677-85099696 MsG0380016556.01.T01:intron 35.0%
CTGCTTAAGGATGTATATGA+GGG - Chr3:85102708-85102727 None:intergenic 35.0%
GAAATGACCTATATTACAGG+GGG + Chr3:85100132-85100151 MsG0380016556.01.T01:intron 35.0%
GAACATGTGTTTATAAAGGG+GGG + Chr3:85102583-85102602 MsG0380016556.01.T01:intron 35.0%
GAATCGACAATGAAAACCAA+TGG - Chr3:85103839-85103858 None:intergenic 35.0%
GAGTCTTAGAATTTGTGGTT+GGG - Chr3:85102651-85102670 None:intergenic 35.0%
GATGAAAAACTAACCACATC+TGG - Chr3:85105076-85105095 None:intergenic 35.0%
GATTCTCATGTCACAAGTAT+GGG + Chr3:85103643-85103662 MsG0380016556.01.T01:CDS 35.0%
GCACGCACAATGTAATAAAT+AGG - Chr3:85103378-85103397 None:intergenic 35.0%
GCCTAATTATGTTTCGAATC+GGG + Chr3:85100201-85100220 MsG0380016556.01.T01:intron 35.0%
GGAAATGACCTATATTACAG+GGG + Chr3:85100131-85100150 MsG0380016556.01.T01:intron 35.0%
GGAACATGTGTTTATAAAGG+GGG + Chr3:85102582-85102601 MsG0380016556.01.T01:intron 35.0%
GGTCATTTCTTATCCAATGT+GGG - Chr3:85102562-85102581 None:intergenic 35.0%
GTTACCAAAGAGTAATTCCA+AGG - Chr3:85102160-85102179 None:intergenic 35.0%
GTTGAAAGTTACGGTATCTT+CGG + Chr3:85101193-85101212 MsG0380016556.01.T01:intron 35.0%
TAATTAATACCGCATTACGG+AGG - Chr3:85103053-85103072 None:intergenic 35.0%
TACCAATACACTATTTGTGG+AGG + Chr3:85103750-85103769 MsG0380016556.01.T01:CDS 35.0%
TACCTTCACTTAGTACGAAA+GGG - Chr3:85104921-85104940 None:intergenic 35.0%
TAGAAATCCCGAGATTGAAA+TGG - Chr3:85099519-85099538 None:intergenic 35.0%
TATGAAGCATAAGATCGATC+TGG + Chr3:85101158-85101177 MsG0380016556.01.T01:intron 35.0%
TATGTTAAAGAGTCCCACAT+TGG + Chr3:85102546-85102565 MsG0380016556.01.T01:intron 35.0%
TCAAACCCAATATCCAACAT+AGG - Chr3:85104955-85104974 None:intergenic 35.0%
TCACTAAAATCAGCTCATGA+AGG - Chr3:85104186-85104205 None:intergenic 35.0%
TGATTCTCATGTCACAAGTA+TGG + Chr3:85103642-85103661 MsG0380016556.01.T01:CDS 35.0%
TGCTACCAATACACTATTTG+TGG + Chr3:85103747-85103766 MsG0380016556.01.T01:CDS 35.0%
TGTATGAGGTTGTCATTACA+AGG - Chr3:85104129-85104148 None:intergenic 35.0%
TTCCCAATACGTGTACAAAA+GGG - Chr3:85099656-85099675 None:intergenic 35.0%
TTTACAAACAGCATCGCAAT+TGG - Chr3:85100844-85100863 None:intergenic 35.0%
TTTACATGCCATATTCGTCA+TGG - Chr3:85103509-85103528 None:intergenic 35.0%
TTTCCCCTATGTTGGATATT+GGG + Chr3:85104947-85104966 MsG0380016556.01.T01:intron 35.0%
! ACGTTGGACAATGTTTTCAA+AGG - Chr3:85102340-85102359 None:intergenic 35.0%
! ATCGCATCTTTTGCAAAGTT+AGG + Chr3:85102279-85102298 MsG0380016556.01.T01:intron 35.0%
! ATTTAAGATCACGAGCTTTG+TGG + Chr3:85100533-85100552 MsG0380016556.01.T01:intron 35.0%
! ATTTTCCCCATTTCAATCTC+GGG + Chr3:85099509-85099528 MsG0380016556.01.T01:intron 35.0%
! CAACCTCATACATTTTTCCA+AGG + Chr3:85104137-85104156 MsG0380016556.01.T01:intron 35.0%
! GATTGCACTTTTGCAAAGTT+AGG - Chr3:85102236-85102255 None:intergenic 35.0%
! GTTGTGTTTCTGTTGAGTTA+AGG + Chr3:85099200-85099219 MsG0380016556.01.T01:five_prime_UTR 35.0%
! TATCACATTTTCCCCTATGT+TGG + Chr3:85104939-85104958 MsG0380016556.01.T01:intron 35.0%
! TCCCGATTCGAAACATAATT+AGG - Chr3:85100205-85100224 None:intergenic 35.0%
! TCGCATCTTTTGCAAAGTTA+GGG + Chr3:85102280-85102299 MsG0380016556.01.T01:intron 35.0%
! TGATGGATAACTTATGCAAC+TGG + Chr3:85103451-85103470 MsG0380016556.01.T01:intron 35.0%
! TTCCCTTTTGTACACGTATT+GGG + Chr3:85099651-85099670 MsG0380016556.01.T01:intron 35.0%
! TTGTTTGCTGCACAAATATG+TGG + Chr3:85104648-85104667 MsG0380016556.01.T01:intron 35.0%
! TTTCCCTTTTGTACACGTAT+TGG + Chr3:85099650-85099669 MsG0380016556.01.T01:intron 35.0%
! TTTTCCCCTATGTTGGATAT+TGG + Chr3:85104946-85104965 MsG0380016556.01.T01:intron 35.0%
!! CAATGAAAACCAATGGACTA+AGG - Chr3:85103832-85103851 None:intergenic 35.0%
!! CGGTGAAAATAGCTTGTTAA+AGG + Chr3:85100894-85100913 MsG0380016556.01.T01:intron 35.0%
!! GTGGTGGACTTATATTTCTT+TGG + Chr3:85101654-85101673 MsG0380016556.01.T01:intron 35.0%
!! TATTACATATGGGTTGGTGA+CGG + Chr3:85100943-85100962 MsG0380016556.01.T01:intron 35.0%
!! TTAGCTCTAAAGTTCTCTCT+CGG + Chr3:85103274-85103293 MsG0380016556.01.T01:intron 35.0%
!!! CCTTTTGAAATTCGTTTGCT+AGG + Chr3:85105450-85105469 MsG0380016556.01.T01:three_prime_UTR 35.0%
!!! CTGCCATTTTCTATAAAAGG+TGG + Chr3:85101545-85101564 MsG0380016556.01.T01:intron 35.0%
!!! GAATCCGGATCCTTATTTTT+TGG + Chr3:85101232-85101251 MsG0380016556.01.T01:intron 35.0%
!!! GGATCCTTATTTTTTGGTTG+TGG + Chr3:85101238-85101257 MsG0380016556.01.T01:intron 35.0%
!!! GTTTTGATTTACCCCCTAAT+AGG + Chr3:85100034-85100053 MsG0380016556.01.T01:intron 35.0%
!!! TGGTTTTGTTTGGCCTATTA+GGG - Chr3:85100050-85100069 None:intergenic 35.0%
!!! TTGGTTTTGTTTGGCCTATT+AGG - Chr3:85100051-85100070 None:intergenic 35.0%
AAAGCAGACAGTCCAACAAT+GGG + Chr3:85104829-85104848 MsG0380016556.01.T01:intron 40.0%
AACGTTAGCAGACGTATTTC+AGG + Chr3:85104974-85104993 MsG0380016556.01.T01:intron 40.0%
ACAAATTACAGACGAGTGGA+AGG + Chr3:85100736-85100755 MsG0380016556.01.T01:intron 40.0%
ACCCTCCACAAATAGTGTAT+TGG - Chr3:85103755-85103774 None:intergenic 40.0%
ACTAAGGGTAACCAGATGAA+AGG - Chr3:85103816-85103835 None:intergenic 40.0%
ACTGAATACCGTAGTCAGTA+CGG - Chr3:85099380-85099399 None:intergenic 40.0%
ACTGGACACCTGTTTAATCT+AGG + Chr3:85103474-85103493 MsG0380016556.01.T01:intron 40.0%
AGAAATTGAACACACTGCCT+TGG - Chr3:85104157-85104176 None:intergenic 40.0%
AGAAGTTAGACTTGTCAGCA+AGG + Chr3:85103918-85103937 MsG0380016556.01.T01:CDS 40.0%
AGCTCGTGATCTTAAATGGT+TGG - Chr3:85100530-85100549 None:intergenic 40.0%
ATAGGATGCATCAAGGGATT+CGG - Chr3:85103022-85103041 None:intergenic 40.0%
ATCCCTTTCGTACTAAGTGA+AGG + Chr3:85104916-85104935 MsG0380016556.01.T01:intron 40.0%
ATGCTCAAAGTTAATCGTGG+AGG - Chr3:85100409-85100428 None:intergenic 40.0%
ATGTGATGAATGATTCCTGG+TGG - Chr3:85102367-85102386 None:intergenic 40.0%
ATTACCATGCAATGCATCCA+TGG - Chr3:85104089-85104108 None:intergenic 40.0%
ATTGTTGGACTGTCTGCTTT+GGG - Chr3:85104829-85104848 None:intergenic 40.0%
ATTTCCAAATTATGGAGGCC+TGG + Chr3:85104605-85104624 MsG0380016556.01.T01:intron 40.0%
CAAAGTTAATCGTGGAGGTT+TGG - Chr3:85100404-85100423 None:intergenic 40.0%
CAAATCCTGGAATTAAGTGG+TGG + Chr3:85103697-85103716 MsG0380016556.01.T01:CDS 40.0%
CACCACTTAATTCCAGGATT+TGG - Chr3:85103699-85103718 None:intergenic 40.0%
CACGCTGTTAAATAGTCTGT+GGG + Chr3:85105268-85105287 MsG0380016556.01.T01:intron 40.0%
CAGATTTCATCTCATGGTTC+GGG + Chr3:85103571-85103590 MsG0380016556.01.T01:intron 40.0%
CAGTCTACTAGAACCATTGA+TGG + Chr3:85103595-85103614 MsG0380016556.01.T01:CDS 40.0%
CATGGATCTTATGCTTCACA+CGG + Chr3:85100281-85100300 MsG0380016556.01.T01:intron 40.0%
CCAAAACGTTAGACAGATCT+AGG - Chr3:85102736-85102755 None:intergenic 40.0%
CCGGAAATGACCTATATTAC+AGG + Chr3:85100129-85100148 MsG0380016556.01.T01:intron 40.0%
CGGTCATTTCTTATCCAATG+TGG - Chr3:85102563-85102582 None:intergenic 40.0%
CTCTTACCAAATCAACAGAG+GGG - Chr3:85102519-85102538 None:intergenic 40.0%
CTGCCTTGGAAAAATGTATG+AGG - Chr3:85104143-85104162 None:intergenic 40.0%
GAAATCCCGAGATTGAAATG+GGG - Chr3:85099517-85099536 None:intergenic 40.0%
GACCAAATCCTGGAATTAAG+TGG + Chr3:85103694-85103713 MsG0380016556.01.T01:CDS 40.0%
GAGATGTGATGAATGATTCC+TGG - Chr3:85102370-85102389 None:intergenic 40.0%
GAGGAAGAATATGGAGTTTG+TGG + Chr3:85101056-85101075 MsG0380016556.01.T01:intron 40.0%
GATAAAACTGACTGTCTGAC+TGG + Chr3:85104370-85104389 MsG0380016556.01.T01:intron 40.0%
GATAACTTATGCAACTGGAC+TGG + Chr3:85103456-85103475 MsG0380016556.01.T01:intron 40.0%
GATCTAGGCTTAACTGCTTA+AGG - Chr3:85102721-85102740 None:intergenic 40.0%
GCAGATTTCATCTCATGGTT+CGG + Chr3:85103570-85103589 MsG0380016556.01.T01:intron 40.0%
GCCACAAAGTTAAGAGAATC+CGG + Chr3:85101217-85101236 MsG0380016556.01.T01:intron 40.0%
GGAGTCTTAGAATTTGTGGT+TGG - Chr3:85102652-85102671 None:intergenic 40.0%
GGTAACCAGATGAAAGGATA+CGG - Chr3:85103810-85103829 None:intergenic 40.0%
GTAACCAGATGAAAGGATAC+GGG - Chr3:85103809-85103828 None:intergenic 40.0%
GTCTACTAGAACCATTGATG+GGG + Chr3:85103597-85103616 MsG0380016556.01.T01:CDS 40.0%
GTCTTTACCCCCTGTAATAT+AGG - Chr3:85100142-85100161 None:intergenic 40.0%
GTGACGAACCTAGATTAAAC+AGG - Chr3:85103485-85103504 None:intergenic 40.0%
GTGATAGTCCGAAACAAAGA+AGG - Chr3:85104692-85104711 None:intergenic 40.0%
GTTCTCTAATGGCTGTTGTA+TGG + Chr3:85101031-85101050 MsG0380016556.01.T01:intron 40.0%
GTTGAAAGTTAGGGCAACTT+TGG - Chr3:85100246-85100265 None:intergenic 40.0%
TATGATCAACCTTCCTCTCA+TGG + Chr3:85104279-85104298 MsG0380016556.01.T01:intron 40.0%
TCACGCTGTTAAATAGTCTG+TGG + Chr3:85105267-85105286 MsG0380016556.01.T01:intron 40.0%
TCCGGATTCTCTTAACTTTG+TGG - Chr3:85101221-85101240 None:intergenic 40.0%
TCTACTAGAACCATTGATGG+GGG + Chr3:85103598-85103617 MsG0380016556.01.T01:CDS 40.0%
TGACGCTGAAGAGATTAACA+TGG + Chr3:85100871-85100890 MsG0380016556.01.T01:intron 40.0%
TTCCATCCAAAAAGGCTTAG+CGG - Chr3:85100781-85100800 None:intergenic 40.0%
TTCTCATGTCACAAGTATGG+GGG + Chr3:85103645-85103664 MsG0380016556.01.T01:CDS 40.0%
TTCTCTCTCGGATATTTCGA+GGG + Chr3:85103286-85103305 MsG0380016556.01.T01:intron 40.0%
TTCTGCTCTATCTTAAGCAG+TGG + Chr3:85101635-85101654 MsG0380016556.01.T01:intron 40.0%
TTGCTGCAGATTTCATCTCA+TGG + Chr3:85103565-85103584 MsG0380016556.01.T01:intron 40.0%
! AATAGTGTATTGGTAGCACC+AGG - Chr3:85103745-85103764 None:intergenic 40.0%
! AGTTGGTATCAGGTTAACCT+TGG + Chr3:85102140-85102159 MsG0380016556.01.T01:intron 40.0%
! CCTAGATCTGTCTAACGTTT+TGG + Chr3:85102733-85102752 MsG0380016556.01.T01:intron 40.0%
! CGCATCTTTTGCAAAGTTAG+GGG + Chr3:85102281-85102300 MsG0380016556.01.T01:intron 40.0%
! GCATCTTTTGCAAAGTTAGG+GGG + Chr3:85102282-85102301 MsG0380016556.01.T01:intron 40.0%
! TAAGAGAGGTGTGGTTATAG+TGG + Chr3:85100990-85101009 MsG0380016556.01.T01:intron 40.0%
! TGTATGGTGGAGGAAGAATA+TGG + Chr3:85101047-85101066 MsG0380016556.01.T01:intron 40.0%
! TTCTGGTTAAGAGAAGGAAG+AGG - Chr3:85104890-85104909 None:intergenic 40.0%
!! TTGTCGATTCCTCTTTCTCA+AGG + Chr3:85103849-85103868 MsG0380016556.01.T01:intron 40.0%
!!! ATCTCACAAGCTGGTTTTGT+GGG + Chr3:85102614-85102633 MsG0380016556.01.T01:intron 40.0%
!!! GGTTTTGTTTGGCCTATTAG+GGG - Chr3:85100049-85100068 None:intergenic 40.0%
!!! GTTTTGTTTGGCCTATTAGG+GGG - Chr3:85100048-85100067 None:intergenic 40.0%
!!! TGGAGGTTTGGTTTTACCTA+GGG - Chr3:85100392-85100411 None:intergenic 40.0%
AACGCTCATAGGATGCATCA+AGG - Chr3:85103029-85103048 None:intergenic 45.0%
AAGCAGACAGTCCAACAATG+GGG + Chr3:85104830-85104849 MsG0380016556.01.T01:intron 45.0%
ACATGCTCAGAGTGAATGGA+TGG - Chr3:85103432-85103451 None:intergenic 45.0%
ACCGCAACTCGGTCAATTTA+CGG + Chr3:85105144-85105163 MsG0380016556.01.T01:CDS 45.0%
ACCGTAAATTGACCGAGTTG+CGG - Chr3:85105148-85105167 None:intergenic 45.0%
ACGCTCATAGGATGCATCAA+GGG - Chr3:85103028-85103047 None:intergenic 45.0%
ATCGGGATTCACTAACTTCG+TGG + Chr3:85100218-85100237 MsG0380016556.01.T01:intron 45.0%
ATGCTTCATACTGTGCCATC+TGG - Chr3:85101148-85101167 None:intergenic 45.0%
ATGTAGGAATCGCGCGTATT+GGG + Chr3:85105350-85105369 MsG0380016556.01.T01:intron 45.0%
ATTACGGAGGTAACGCTCAT+AGG - Chr3:85103040-85103059 None:intergenic 45.0%
CAAAACCAGCTTGTGAGATG+AGG - Chr3:85102613-85102632 None:intergenic 45.0%
CAAACCAGGCCTCCATAATT+TGG - Chr3:85104612-85104631 None:intergenic 45.0%
CAAAGCAGACAGTCCAACAA+TGG + Chr3:85104828-85104847 MsG0380016556.01.T01:intron 45.0%
CAAGCATCCAGATAAGAGTG+GGG + Chr3:85104480-85104499 MsG0380016556.01.T01:intron 45.0%
CAGGGCATGTTGTTGAATTG+AGG - Chr3:85101428-85101447 None:intergenic 45.0%
CATCACATGCTCAGAGTGAA+TGG - Chr3:85103436-85103455 None:intergenic 45.0%
CATTCACTCTGAGCATGTGA+TGG + Chr3:85103434-85103453 MsG0380016556.01.T01:intron 45.0%
CATTGTTGGACTGTCTGCTT+TGG - Chr3:85104830-85104849 None:intergenic 45.0%
CCAATAAGCGTCAGACATGA+CGG - Chr3:85099304-85099323 None:intergenic 45.0%
CGCTGAAGAGATTAACATGG+CGG + Chr3:85100874-85100893 MsG0380016556.01.T01:intron 45.0%
CTCTAATGGCTGTTGTATGG+TGG + Chr3:85101034-85101053 MsG0380016556.01.T01:intron 45.0%
CTGAATACCGTAGTCAGTAC+GGG - Chr3:85099379-85099398 None:intergenic 45.0%
CTGATCACGCTGCTAATAGT+TGG - Chr3:85104719-85104738 None:intergenic 45.0%
GAAGCATAAGATCGATCTGG+CGG + Chr3:85101161-85101180 MsG0380016556.01.T01:intron 45.0%
GCAAGCATCCAGATAAGAGT+GGG + Chr3:85104479-85104498 MsG0380016556.01.T01:intron 45.0%
GCAGATGAATAGCTCAAACC+AGG - Chr3:85104626-85104645 None:intergenic 45.0%
GTAATTCTCGACTGAAAGGC+TGG - Chr3:85105403-85105422 None:intergenic 45.0%
GTGTTAAGGCCTTGAGAAAG+AGG - Chr3:85103861-85103880 None:intergenic 45.0%
GTTATTACCAACTCCACGAC+AGG - Chr3:85104240-85104259 None:intergenic 45.0%
GTTCTCTCTCGGATATTTCG+AGG + Chr3:85103285-85103304 MsG0380016556.01.T01:intron 45.0%
TAATGGCTGTTGTATGGTGG+AGG + Chr3:85101037-85101056 MsG0380016556.01.T01:intron 45.0%
TACTGCTCCTGCGAATATCT+GGG + Chr3:85105587-85105606 MsG0380016556.01.T01:three_prime_UTR 45.0%
TACTTCGCGTCTTGTACAGT+TGG - Chr3:85103785-85103804 None:intergenic 45.0%
TAGTACTCCCCACTCTTATC+TGG - Chr3:85104490-85104509 None:intergenic 45.0%
TATGTAGGAATCGCGCGTAT+TGG + Chr3:85105349-85105368 MsG0380016556.01.T01:intron 45.0%
TCACGAATGGGAAAGCTCAA+TGG - Chr3:85099557-85099576 None:intergenic 45.0%
TCGTCACACCATGACGAATA+TGG + Chr3:85103498-85103517 MsG0380016556.01.T01:intron 45.0%
TCTCATGTCACAAGTATGGG+GGG + Chr3:85103646-85103665 MsG0380016556.01.T01:CDS 45.0%
TCTGGTTACCCTTAGTCCAT+TGG + Chr3:85103820-85103839 MsG0380016556.01.T01:intron 45.0%
TGAATACCGTAGTCAGTACG+GGG - Chr3:85099378-85099397 None:intergenic 45.0%
TGCTCTATCTTAAGCAGTGG+TGG + Chr3:85101638-85101657 MsG0380016556.01.T01:intron 45.0%
TGTCAGCAAGGAATCAAGAC+AGG + Chr3:85103930-85103949 MsG0380016556.01.T01:CDS 45.0%
TGTTCGTTCAAGTCTACACG+AGG - Chr3:85099231-85099250 None:intergenic 45.0%
TTACTGCTCCTGCGAATATC+TGG + Chr3:85105586-85105605 MsG0380016556.01.T01:three_prime_UTR 45.0%
! GACTGTCTGCTTTGGGTATT+TGG - Chr3:85104822-85104841 None:intergenic 45.0%
! TCCTGGAATTAAGTGGTGGA+AGG + Chr3:85103701-85103720 MsG0380016556.01.T01:CDS 45.0%
!! AGATAAGAGTGGGGAGTACT+AGG + Chr3:85104489-85104508 MsG0380016556.01.T01:intron 45.0%
!!! CATCTCACAAGCTGGTTTTG+TGG + Chr3:85102613-85102632 MsG0380016556.01.T01:intron 45.0%
!!! GTGGAGGTTTGGTTTTACCT+AGG - Chr3:85100393-85100412 None:intergenic 45.0%
!!! TCTCACAAGCTGGTTTTGTG+GGG + Chr3:85102615-85102634 MsG0380016556.01.T01:intron 45.0%
!!! TGGTTTTGTGGGGTTGTGTT+AGG + Chr3:85102625-85102644 MsG0380016556.01.T01:intron 45.0%
!!! TTTGGTTTTACCTAGGGCAG+TGG - Chr3:85100386-85100405 None:intergenic 45.0%
!! AAAAAAAAAAAAAATATTAC+AGG - Chr3:85099980-85099999 None:intergenic 5.0%
!! AAAAAAAAAAAAATATTACA+GGG - Chr3:85099979-85099998 None:intergenic 5.0%
!!! ATATATATTTTGAAAATTTA+TGG + Chr3:85104444-85104463 MsG0380016556.01.T01:intron 5.0%
!!! ATTAGTATTTTTTTTATTTA+AGG + Chr3:85099938-85099957 MsG0380016556.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTGATT+TGG + Chr3:85099988-85100007 MsG0380016556.01.T01:intron 5.0%
ACTGCCATGGATGCATTGCA+TGG + Chr3:85104082-85104101 MsG0380016556.01.T01:CDS 50.0%
ACTGGGATTATGTGCAGCCT+GGG + Chr3:85104005-85104024 MsG0380016556.01.T01:intron 50.0%
CACATCTGGACAGCCAAAGA+GGG - Chr3:85105062-85105081 None:intergenic 50.0%
CCGTCATGTCTGACGCTTAT+TGG + Chr3:85099301-85099320 MsG0380016556.01.T01:exon 50.0%
CCTTCCTCTATCATCGTCGT+GGG - Chr3:85102980-85102999 None:intergenic 50.0%
CTTACCTCCCAGATATTCGC+AGG - Chr3:85105597-85105616 None:intergenic 50.0%
CTTCCTCTATCATCGTCGTG+GGG - Chr3:85102979-85102998 None:intergenic 50.0%
GACAGTCCAACAATGGGGAA+TGG + Chr3:85104835-85104854 MsG0380016556.01.T01:intron 50.0%
GAGTCTCCATTCCCCATTGT+TGG - Chr3:85104844-85104863 None:intergenic 50.0%
GATTCCTGGTGGCATAACGT+TGG - Chr3:85102356-85102375 None:intergenic 50.0%
GCAATCCTCATCTCACAAGC+TGG + Chr3:85102605-85102624 MsG0380016556.01.T01:intron 50.0%
GCCTTCCACCACTTAATTCC+AGG - Chr3:85103705-85103724 None:intergenic 50.0%
GGCAAGCATCCAGATAAGAG+TGG + Chr3:85104478-85104497 MsG0380016556.01.T01:intron 50.0%
GGCATGTAAGTCGGTAAGAG+AGG + Chr3:85100976-85100995 MsG0380016556.01.T01:intron 50.0%
GGTGTGGTTATAGTGGTGGT+CGG + Chr3:85100997-85101016 MsG0380016556.01.T01:intron 50.0%
GTAAGTCGGTAAGAGAGGTG+TGG + Chr3:85100981-85101000 MsG0380016556.01.T01:intron 50.0%
GTAGCCCGTATCCTTTCATC+TGG + Chr3:85103802-85103821 MsG0380016556.01.T01:CDS 50.0%
GTTGGGAATCAGCTTGTGAC+TGG - Chr3:85102082-85102101 None:intergenic 50.0%
TAGCACCAGGTGGAAGTGAA+TGG - Chr3:85103732-85103751 None:intergenic 50.0%
TCGCGTCTTGTACAGTTGGA+AGG - Chr3:85103781-85103800 None:intergenic 50.0%
TCGGATATTTCGAGGGCTCA+TGG + Chr3:85103293-85103312 MsG0380016556.01.T01:intron 50.0%
TCTTGATGCAGTGCCATGAG+AGG - Chr3:85104295-85104314 None:intergenic 50.0%
TGAGCGTTACCTCCGTAATG+CGG + Chr3:85103041-85103060 MsG0380016556.01.T01:CDS 50.0%
TGATGAGCTTGACCGCAACT+CGG + Chr3:85105133-85105152 MsG0380016556.01.T01:CDS 50.0%
TGTAGGAATCGCGCGTATTG+GGG + Chr3:85105351-85105370 MsG0380016556.01.T01:intron 50.0%
TGTCTCGGGCGTTCATAACT+TGG + Chr3:85102942-85102961 MsG0380016556.01.T01:CDS 50.0%
TTGTCCAACGTTATGCCACC+AGG + Chr3:85102349-85102368 MsG0380016556.01.T01:intron 50.0%
TTTCCCCACGACGATGATAG+AGG + Chr3:85102973-85102992 MsG0380016556.01.T01:CDS 50.0%
TTTCCTGGTATGTCCTGTCG+TGG + Chr3:85104224-85104243 MsG0380016556.01.T01:intron 50.0%
! AGTGTATTGGTAGCACCAGG+TGG - Chr3:85103742-85103761 None:intergenic 50.0%
! GAGAGGTGTGGTTATAGTGG+TGG + Chr3:85100993-85101012 MsG0380016556.01.T01:intron 50.0%
! GATTGGTCGAGTCAAGACAG+CGG - Chr3:85100453-85100472 None:intergenic 50.0%
! TATGCGCCGCTAAGCCTTTT+TGG + Chr3:85100772-85100791 MsG0380016556.01.T01:intron 50.0%
! TCTGACTGGAGAGTGTACAG+TGG + Chr3:85104384-85104403 MsG0380016556.01.T01:intron 50.0%
! TTGACGCCCCTCTGTTGATT+TGG + Chr3:85102510-85102529 MsG0380016556.01.T01:intron 50.0%
!! AAACGTCCCCGTACTGACTA+CGG + Chr3:85099369-85099388 MsG0380016556.01.T01:CDS 50.0%
!! TACATATGGGTTGGTGACGG+TGG + Chr3:85100946-85100965 MsG0380016556.01.T01:intron 50.0%
ACTCCACGACAGGACATACC+AGG - Chr3:85104230-85104249 None:intergenic 55.0%
ACTGGGAACTCCCCCATCAA+TGG - Chr3:85103611-85103630 None:intergenic 55.0%
AGCGTCAGACATGACGGTGT+TGG - Chr3:85099298-85099317 None:intergenic 55.0%
AGTAACAGTGGATCACCCCC+AGG - Chr3:85104025-85104044 None:intergenic 55.0%
ATCTGGACAGCCAAAGAGGG+TGG - Chr3:85105059-85105078 None:intergenic 55.0%
ATGGCACTGCATCAAGAGCG+TGG + Chr3:85104298-85104317 MsG0380016556.01.T01:intron 55.0%
ATGGCAGTTGCTGCATGAGC+CGG - Chr3:85104070-85104089 None:intergenic 55.0%
CCACATCTGGACAGCCAAAG+AGG - Chr3:85105063-85105082 None:intergenic 55.0%
CCAGGTGGAAGTGAATGGTC+AGG - Chr3:85103727-85103746 None:intergenic 55.0%
CCCACGACGATGATAGAGGA+AGG + Chr3:85102977-85102996 MsG0380016556.01.T01:CDS 55.0%
CCTCTTTGGCTGTCCAGATG+TGG + Chr3:85105060-85105079 MsG0380016556.01.T01:intron 55.0%
CCTGACCATTCACTTCCACC+TGG + Chr3:85103724-85103743 MsG0380016556.01.T01:CDS 55.0%
CTGGGATTATGTGCAGCCTG+GGG + Chr3:85104006-85104025 MsG0380016556.01.T01:intron 55.0%
GACTGGGATTATGTGCAGCC+TGG + Chr3:85104004-85104023 MsG0380016556.01.T01:intron 55.0%
GATGCAGTGCCATGAGAGGA+AGG - Chr3:85104291-85104310 None:intergenic 55.0%
GCCTTCCTCTATCATCGTCG+TGG - Chr3:85102981-85103000 None:intergenic 55.0%
GGGGAATGGAGACTCACTGA+AGG + Chr3:85104849-85104868 MsG0380016556.01.T01:intron 55.0%
GGGGAGGTTGTGTTTGTGAG+AGG + Chr3:85105370-85105389 MsG0380016556.01.T01:three_prime_UTR 55.0%
GGTATGTCCTGTCGTGGAGT+TGG + Chr3:85104230-85104249 MsG0380016556.01.T01:intron 55.0%
GTGGTGGTCGGAGTCGAATA+TGG + Chr3:85101009-85101028 MsG0380016556.01.T01:intron 55.0%
TCCAATTCGCTCGCAACCCT+GGG + Chr3:85105168-85105187 MsG0380016556.01.T01:CDS 55.0%
TGCTCCTGCGAATATCTGGG+AGG + Chr3:85105590-85105609 MsG0380016556.01.T01:three_prime_UTR 55.0%
TGGGATTATGTGCAGCCTGG+GGG + Chr3:85104007-85104026 MsG0380016556.01.T01:intron 55.0%
TTCCAATTCGCTCGCAACCC+TGG + Chr3:85105167-85105186 MsG0380016556.01.T01:CDS 55.0%
! CGCCGCTAAGCCTTTTTGGA+TGG + Chr3:85100776-85100795 MsG0380016556.01.T01:intron 55.0%
! GGAGGCACAGGCATGTAAGT+CGG + Chr3:85100967-85100986 MsG0380016556.01.T01:intron 55.0%
!! ATATGGGTTGGTGACGGTGG+AGG + Chr3:85100949-85100968 MsG0380016556.01.T01:intron 55.0%
AATTCGCTCGCAACCCTGGG+AGG + Chr3:85105171-85105190 MsG0380016556.01.T01:CDS 60.0%
ACGTTTGCCGGGGATGGTAG+GGG - Chr3:85099355-85099374 None:intergenic 60.0%
AGGAATCGCGCGTATTGGGG+AGG + Chr3:85105354-85105373 MsG0380016556.01.T01:intron 60.0%
CTTCCTGCTGCCACCCTCTT+TGG + Chr3:85105046-85105065 MsG0380016556.01.T01:intron 60.0%
GACGTTTGCCGGGGATGGTA+GGG - Chr3:85099356-85099375 None:intergenic 60.0%
GGCTCATGCAGCAACTGCCA+TGG + Chr3:85104069-85104088 MsG0380016556.01.T01:CDS 60.0%
GTCAGTACGGGGACGTTTGC+CGG - Chr3:85099367-85099386 None:intergenic 60.0%
TCAGTACGGGGACGTTTGCC+GGG - Chr3:85099366-85099385 None:intergenic 60.0%
TCCCAGGGTTGCGAGCGAAT+TGG - Chr3:85105172-85105191 None:intergenic 60.0%
TGGTCGAGTCAAGACAGCGG+CGG - Chr3:85100450-85100469 None:intergenic 60.0%
! GGGAGCGTGCTGCTGAGATT+CGG - Chr3:85099334-85099353 None:intergenic 60.0%
AACCCTGGGAGGTCAGGTGG+CGG + Chr3:85105182-85105201 MsG0380016556.01.T01:CDS 65.0%
CAGCCAAAGAGGGTGGCAGC+AGG - Chr3:85105052-85105071 None:intergenic 65.0%
CAGTACGGGGACGTTTGCCG+GGG - Chr3:85099365-85099384 None:intergenic 65.0%
CGTTTGCCGGGGATGGTAGG+GGG - Chr3:85099354-85099373 None:intergenic 65.0%
CTAGGGCAGTGGTGCAGCAC+AGG - Chr3:85100375-85100394 None:intergenic 65.0%
CTGTGCTGCACCACTGCCCT+AGG + Chr3:85100373-85100392 MsG0380016556.01.T01:intron 65.0%
GGACGTTTGCCGGGGATGGT+AGG - Chr3:85099357-85099376 None:intergenic 65.0%
TGGTGCAGCACAGGAGCCGA+GGG - Chr3:85100366-85100385 None:intergenic 65.0%
!! GTTGGTGACGGTGGAGGCAC+AGG + Chr3:85100955-85100974 MsG0380016556.01.T01:intron 65.0%
ACCCTGGGAGGTCAGGTGGC+GGG + Chr3:85105183-85105202 MsG0380016556.01.T01:CDS 70.0%
ACGGGGACGTTTGCCGGGGA+TGG - Chr3:85099361-85099380 None:intergenic 70.0%
CACGCTCCCCCTACCATCCC+CGG + Chr3:85099345-85099364 MsG0380016556.01.T01:CDS 70.0%
CGCAACCCTGGGAGGTCAGG+TGG + Chr3:85105179-85105198 MsG0380016556.01.T01:CDS 70.0%
GCTCGCAACCCTGGGAGGTC+AGG + Chr3:85105176-85105195 MsG0380016556.01.T01:CDS 70.0%
GTGGTGCAGCACAGGAGCCG+AGG - Chr3:85100367-85100386 None:intergenic 70.0%
!! AGGTCAGGTGGCGGGCATCG+TGG + Chr3:85105191-85105210 MsG0380016556.01.T01:CDS 70.0%
GCCCGCCACCTGACCTCCCA+GGG - Chr3:85105187-85105206 None:intergenic 75.0%
TGCCCGCCACCTGACCTCCC+AGG - Chr3:85105188-85105207 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 85099152 85105757 85099152 ID=MsG0380016556.01;Name=MsG0380016556.01
Chr3 mRNA 85099152 85105757 85099152 ID=MsG0380016556.01.T01;Parent=MsG0380016556.01;Name=MsG0380016556.01.T01;_AED=0.40;_eAED=0.41;_QI=154|0.83|0.85|1|0.83|0.71|7|418|233
Chr3 exon 85099152 85099390 85099152 ID=MsG0380016556.01.T01:exon:14428;Parent=MsG0380016556.01.T01
Chr3 exon 85102941 85103062 85102941 ID=MsG0380016556.01.T01:exon:14429;Parent=MsG0380016556.01.T01
Chr3 exon 85103574 85103823 85103574 ID=MsG0380016556.01.T01:exon:14430;Parent=MsG0380016556.01.T01
Chr3 exon 85103890 85103951 85103890 ID=MsG0380016556.01.T01:exon:14431;Parent=MsG0380016556.01.T01
Chr3 exon 85104022 85104103 85104022 ID=MsG0380016556.01.T01:exon:14432;Parent=MsG0380016556.01.T01
Chr3 exon 85105123 85105239 85105123 ID=MsG0380016556.01.T01:exon:14433;Parent=MsG0380016556.01.T01
Chr3 exon 85105356 85105757 85105356 ID=MsG0380016556.01.T01:exon:14434;Parent=MsG0380016556.01.T01
Chr3 five_prime_UTR 85099152 85099305 85099152 ID=MsG0380016556.01.T01:five_prime_utr;Parent=MsG0380016556.01.T01
Chr3 CDS 85099306 85099390 85099306 ID=MsG0380016556.01.T01:cds;Parent=MsG0380016556.01.T01
Chr3 CDS 85102941 85103062 85102941 ID=MsG0380016556.01.T01:cds;Parent=MsG0380016556.01.T01
Chr3 CDS 85103574 85103823 85103574 ID=MsG0380016556.01.T01:cds;Parent=MsG0380016556.01.T01
Chr3 CDS 85103890 85103951 85103890 ID=MsG0380016556.01.T01:cds;Parent=MsG0380016556.01.T01
Chr3 CDS 85104022 85104103 85104022 ID=MsG0380016556.01.T01:cds;Parent=MsG0380016556.01.T01
Chr3 CDS 85105123 85105223 85105123 ID=MsG0380016556.01.T01:cds;Parent=MsG0380016556.01.T01
Chr3 three_prime_UTR 85105224 85105239 85105224 ID=MsG0380016556.01.T01:three_prime_utr;Parent=MsG0380016556.01.T01
Chr3 three_prime_UTR 85105356 85105757 85105356 ID=MsG0380016556.01.T01:three_prime_utr;Parent=MsG0380016556.01.T01
Gene Sequence

>MsG0380016556.01.T01

ATGTCTGACGCTTATTGGAGATACGCCGAATCTCAGCAGCACGCTCCCCCTACCATCCCCGGCAAACGTCCCCGTACTGACTACGATGTCTCGGGCGTTCATAACTTGGCAAATTACTTTCCCCACGACGATGATAGAGGAAGGCTCCAAGTAATTAGAGATACCGAATCCCTTGATGCATCCTATGAGCGTTACCTCCGTAATGCGATTTCATCTCATGGTTCGGGACAGTCTACTAGAACCATTGATGGGGGAGTTCCCAGTCATTCTATTGATGATTCTCATGTCACAAGTATGGGGGGAGTTGACCGAAGAACAAATGTAAAAGACCAAATCCTGGAATTAAGTGGTGGAAGGCCTGACCATTCACTTCCACCTGGTGCTACCAATACACTATTTGTGGAGGGTTTACCTTCCAACTGTACAAGACGCGAAGTAGCCCGTATCCTTTCATCTGATATTTTTCGTCCTTTTGTTGGCTACAAAGAAGTTAGACTTGTCAGCAAGGAATCAAGACAGCCTGGGGGTGATCCACTGTTACTTTGTTTTGTTGATTTTGTAAGTCCGGCTCATGCAGCAACTGCCATGGATGCATTGCATGGTTACAAATTTGATGAGCTTGACCGCAACTCGGTCAATTTACGGTTCCAATTCGCTCGCAACCCTGGGAGGTCAGGTGGCGGGCATCGTGGCAAGCGTTGA
Protein sequence

>MsG0380016556.01.T01

MSDAYWRYAESQQHAPPTIPGKRPRTDYDVSGVHNLANYFPHDDDRGRLQVIRDTESLDASYERYLRNAISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILELSGGRPDHSLPPGATNTLFVEGLPSNCTRREVARILSSDIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAHAATAMDALHGYKFDELDRNSVNLRFQFARNPGRSGGGHRGKR*