AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042987.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042987.01.T01 MTR_8g027450 99.071 969 9 0 1 969 1 969 0.0 1971
MsG0880042987.01.T01 MTR_6g051660 74.829 731 182 2 1 729 1 731 0.0 1078
MsG0880042987.01.T01 MTR_7g021500 26.800 250 156 7 18 262 13 240 1.13e-14 79.3
MsG0880042987.01.T01 MTR_7g021500 26.800 250 156 7 18 262 13 240 1.14e-14 79.3
MsG0880042987.01.T01 MTR_1g116957 25.911 247 160 5 18 262 11 236 7.87e-12 70.1
MsG0880042987.01.T01 MTR_0010s0220 33.835 133 83 2 6 133 7 139 1.23e-11 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042987.01.T01 AT2G46520 68.454 970 299 3 1 965 1 968 0.0 1407
MsG0880042987.01.T01 AT3G59020 27.273 253 157 7 18 265 14 244 1.80e-15 82.0
MsG0880042987.01.T01 AT3G59020 27.273 253 157 7 18 265 14 244 2.21e-15 81.6
MsG0880042987.01.T01 AT2G31660 28.270 237 140 6 19 246 15 230 1.21e-14 79.3
MsG0880042987.01.T01 AT1G26170 21.326 558 337 14 6 511 5 512 2.87e-13 74.7

Find 284 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAATGAGGAGGAGTTTA+AGG 0.075617 8:-17135064 MsG0880042987.01.T01:CDS
GATATTCAGTTCACTGTTTC+TGG 0.091376 8:-17133552 MsG0880042987.01.T01:CDS
CGCCACCGGGTTTGCATTAA+AGG 0.121487 8:+17134663 None:intergenic
TCGGCATGGCGGCGGGGTTC+AGG 0.177061 8:+17135855 None:intergenic
CGCCTTATGTTTCTCACATC+TGG 0.180669 8:-17133634 MsG0880042987.01.T01:CDS
CTTGCTGTGTGGACTTTGTT+AGG 0.222365 8:-17135021 MsG0880042987.01.T01:CDS
CAAGGATTGTGCGATATATT+TGG 0.232980 8:-17134629 MsG0880042987.01.T01:CDS
CAAGCGGAAATGCAGGAAAT+TGG 0.242407 8:+17131682 None:intergenic
CCGAATCTTAAGCTGATTAC+TGG 0.249866 8:-17133443 MsG0880042987.01.T01:CDS
TTGTGAGTCTCCAGTACTTC+TGG 0.252989 8:-17133375 MsG0880042987.01.T01:CDS
ATCCTGCAGCTTCTGCATCC+TGG 0.258895 8:-17133352 MsG0880042987.01.T01:CDS
TGAGAATATTAATCTTTATA+TGG 0.266958 8:-17135088 MsG0880042987.01.T01:CDS
TTCTGCATCCTGGGGTAAAA+TGG 0.284025 8:-17133342 MsG0880042987.01.T01:CDS
CAGCTTTGTGCACAGTTCCC+TGG 0.284744 8:-17133128 MsG0880042987.01.T01:CDS
CGAATTTGCATTGAGGGGTT+GGG 0.285078 8:-17134145 MsG0880042987.01.T01:CDS
TTCAGACTCTGGGAGCTTAA+AGG 0.289130 8:+17134237 None:intergenic
TGAAGTGCCATTTGGTCTAT+TGG 0.316250 8:-17131741 MsG0880042987.01.T01:three_prime_UTR
TCCCCTTGGCTGATCTCATT+TGG 0.319827 8:+17133773 None:intergenic
AGAAGCGAGGGCCATGATTT+GGG 0.321584 8:+17135558 None:intergenic
TTGCTCTTGTGGATGAGCTT+AGG 0.321661 8:-17135122 MsG0880042987.01.T01:CDS
TGAATCATATTGAGTATATT+AGG 0.323794 8:-17134816 MsG0880042987.01.T01:CDS
TCCTGCAGCTTCTGCATCCT+GGG 0.325044 8:-17133351 MsG0880042987.01.T01:CDS
TGGCGGCGGGGTTCAGGGAG+AGG 0.326998 8:+17135861 None:intergenic
CCATGGTGAATGTGCGATTA+GGG 0.332349 8:+17135940 None:intergenic
TTCATCAGCATTGAGAAAAC+TGG 0.336053 8:+17134274 None:intergenic
AAGAAGCGAGGGCCATGATT+TGG 0.336122 8:+17135557 None:intergenic
ATGCAAACCCGGTGGCGAAT+TGG 0.341622 8:-17134657 MsG0880042987.01.T01:CDS
AAAAGCGGTTTAAGAGTTTC+CGG 0.343454 8:+17135297 None:intergenic
AAGCGGAAATGCAGGAAATT+GGG 0.347791 8:+17131683 None:intergenic
AGTCACAGAAATTGTGTTGT+AGG 0.352604 8:-17135272 MsG0880042987.01.T01:CDS
GAAGTGCCATTTGGTCTATT+GGG 0.356405 8:-17131740 MsG0880042987.01.T01:three_prime_UTR
ATCATGGCCCTCGCTTCTTC+CGG 0.357089 8:-17135553 MsG0880042987.01.T01:CDS
GGAAGCATTCGGAGAGGAAT+TGG 0.359953 8:+17135898 None:intergenic
GATTGCTTGTGAGTTGCTTA+AGG 0.364735 8:-17134755 MsG0880042987.01.T01:CDS
AGCTTTGTGCACAGTTCCCT+GGG 0.366805 8:-17133127 MsG0880042987.01.T01:CDS
GTATTGTGACACTTCTTTCT+CGG 0.370722 8:-17133313 MsG0880042987.01.T01:CDS
CTACTGACTCAAACAGATAA+TGG 0.371221 8:+17134074 None:intergenic
TCCCGGGGATCATTAATATC+TGG 0.373759 8:+17133173 None:intergenic
AAATGTATTATGAGGGTTCT+TGG 0.376293 8:-17134196 MsG0880042987.01.T01:CDS
ACCATTGATTGAAGCGTAAT+CGG 0.377577 8:+17135494 None:intergenic
TGCTCTTGTGGATGAGCTTA+GGG 0.378445 8:-17135121 MsG0880042987.01.T01:CDS
TGAGTATATTAGGAGGGATA+TGG 0.381340 8:-17134806 MsG0880042987.01.T01:CDS
TCGAATTTGCATTGAGGGGT+TGG 0.382244 8:-17134146 MsG0880042987.01.T01:CDS
AAGGGGATTGCTACGCGTTA+TGG 0.383164 8:-17134736 MsG0880042987.01.T01:CDS
GCTTTACTGTCCGCCTTCTC+TGG 0.384838 8:+17133591 None:intergenic
TGAAGACTAGCAACAAGTTC+CGG 0.387862 8:+17135534 None:intergenic
AGAGCATGAGAGGTACGATT+AGG 0.389704 8:+17135646 None:intergenic
AAAATCGCACTAAATATATC+AGG 0.393109 8:+17133482 None:intergenic
CAGGGAACTGTGCACAAAGC+TGG 0.393904 8:+17133129 None:intergenic
CCCGATGATGGCTAGGGCTT+CGG 0.395200 8:+17135593 None:intergenic
GATTATACCGCAGATTTGTC+AGG 0.398128 8:-17134893 MsG0880042987.01.T01:CDS
TGCTGATGGTCTTGCTCTTG+TGG 0.398506 8:-17135133 MsG0880042987.01.T01:CDS
CTTGTTGCTAGTCTTCAAAA+AGG 0.400301 8:-17135528 MsG0880042987.01.T01:CDS
CGGCATGGCGGCGGGGTTCA+GGG 0.402619 8:+17135856 None:intergenic
ATGCAGGAAATTGGGGAAAG+GGG 0.403420 8:+17131691 None:intergenic
CATAGTTTGTTTGCGGCCGA+TGG 0.405046 8:-17134916 MsG0880042987.01.T01:CDS
TCCGATTACGCTTCAATCAA+TGG 0.406354 8:-17135495 MsG0880042987.01.T01:CDS
GCAAGGAAACGAACCAAATC+AGG 0.407252 8:+17134403 None:intergenic
TCCATGGTGAATGTGCGATT+AGG 0.408488 8:+17135939 None:intergenic
TGCCCTTGTGCGTCTACTCC+AGG 0.410838 8:-17133813 MsG0880042987.01.T01:CDS
GCTTGATTTGAAGTATTGTT+TGG 0.411121 8:-17135406 MsG0880042987.01.T01:CDS
TGTGTTGAGAAGAGAAGTTT+TGG 0.412857 8:+17135966 None:intergenic
ATGTTATGAAATGTATTATG+AGG 0.413049 8:-17134204 MsG0880042987.01.T01:CDS
GAGCATGAGAGGTACGATTA+GGG 0.413296 8:+17135647 None:intergenic
TTGCTGTGTGGACTTTGTTA+GGG 0.413943 8:-17135020 MsG0880042987.01.T01:CDS
TCTGCAATATCTGGCATGTC+AGG 0.421184 8:+17133263 None:intergenic
TAAGATTCGGAATCCAGAAC+TGG 0.422640 8:+17133456 None:intergenic
GGCGGAGGAGAGAGAGGATT+CGG 0.425618 8:+17135836 None:intergenic
TCCTCCCTCAACCTCACATT+CGG 0.426403 8:+17134859 None:intergenic
TCAAATATCTGCATGTAGAT+TGG 0.426703 8:+17133881 None:intergenic
TCTCTTGAGGGGAGTGCTGA+TGG 0.427391 8:-17135147 MsG0880042987.01.T01:CDS
AGAGGATTCGGCATGGCGGC+GGG 0.428160 8:+17135848 None:intergenic
GTTAGGTTGGGAGGAGGCGG+AGG 0.429322 8:+17135821 None:intergenic
GAAGTTAGGTTGGGAGGAGG+CGG 0.430922 8:+17135818 None:intergenic
GTCAAATATGCCAAGTACTT+TGG 0.431949 8:+17133742 None:intergenic
GGAGGAGGCGGAGGAGAGAG+AGG 0.432967 8:+17135830 None:intergenic
TGTTCATCATAGTTTGTTTG+CGG 0.433062 8:-17134923 MsG0880042987.01.T01:CDS
AGGACGGCGAGGGCGAAGTT+AGG 0.434374 8:+17135804 None:intergenic
ATGAATGGATGGGTGAGTTT+AGG 0.434733 8:-17135194 MsG0880042987.01.T01:CDS
CGGCGAGGGCGAAGTTAGGT+TGG 0.440463 8:+17135808 None:intergenic
ATTGCTTGTGAGTTGCTTAA+GGG 0.442178 8:-17134754 MsG0880042987.01.T01:CDS
GCCTTATGTTTCTCACATCT+GGG 0.442390 8:-17133633 MsG0880042987.01.T01:CDS
GCTGCAGGATCCAGAAGTAC+TGG 0.443966 8:+17133365 None:intergenic
TTGTCCTTCCAATTCGCCAC+CGG 0.447945 8:+17134649 None:intergenic
CATGTGTTTGAAGTGCCATT+TGG 0.453119 8:-17131749 MsG0880042987.01.T01:three_prime_UTR
TTAATTCTCAGGATCTGTGC+TGG 0.454020 8:-17131975 MsG0880042987.01.T01:intron
TTCGTCCAACTTTACAGTGC+TGG 0.454745 8:-17133218 MsG0880042987.01.T01:CDS
AGAGGAATTGGAGAGTTTGT+TGG 0.459131 8:+17135910 None:intergenic
GAATTTGCATTGAGGGGTTG+GGG 0.459250 8:-17134144 MsG0880042987.01.T01:CDS
TGTCCTTCCAATTCGCCACC+GGG 0.461059 8:+17134650 None:intergenic
GGGCTTCGGAGAGCTGAGAT+TGG 0.462047 8:+17135607 None:intergenic
TTATTTCAAGCCGAGGGAAA+AGG 0.463307 8:+17133990 None:intergenic
TACTGATTCTCTTCAGACTC+TGG 0.463688 8:+17134226 None:intergenic
CATGCATGCCTTTGAGCAAA+TGG 0.463839 8:-17131654 MsG0880042987.01.T01:three_prime_UTR
TAAAATCCCAATAGACCAAA+TGG 0.464525 8:+17131734 None:intergenic
GAGAGGATTCGGCATGGCGG+CGG 0.465228 8:+17135847 None:intergenic
TTGAGGATCATATGAATGAA+TGG 0.467479 8:-17135209 MsG0880042987.01.T01:CDS
CGTGATTCCCGATGATGGCT+AGG 0.467869 8:+17135586 None:intergenic
AGTTTGTTGGTTCCATTCCA+TGG 0.468298 8:+17135923 None:intergenic
CAGGGAGAGGAGAGAGAGTG+TGG 0.469257 8:+17135874 None:intergenic
CCAGTAATCAGCTTAAGATT+CGG 0.472206 8:+17133443 None:intergenic
TTTCTCGGCAAGAACAAGAC+AGG 0.475623 8:-17133298 MsG0880042987.01.T01:CDS
TAGTAAAGGACGAGGGTGGC+AGG 0.478712 8:-17134324 MsG0880042987.01.T01:CDS
TGCTCAACAAGCGGAAATGC+AGG 0.478829 8:+17131675 None:intergenic
GAGAGTGTGGAGGAAGCATT+CGG 0.480598 8:+17135887 None:intergenic
TGGAGTAGACGCACAAGGGC+AGG 0.484502 8:+17133815 None:intergenic
TCCTTCCAGCACTGTAAAGT+TGG 0.484930 8:+17133213 None:intergenic
CTCAGGATCTGTGCTGGGAT+GGG 0.485325 8:-17131969 MsG0880042987.01.T01:intron
GGTTTAAGAGTTTCCGGTGA+TGG 0.486899 8:+17135303 None:intergenic
TCCAATCCTCGATTCTGAAA+AGG 0.487595 8:-17135682 MsG0880042987.01.T01:CDS
TCTACAAAGAAGGCTGCAAC+CGG 0.487821 8:-17134595 MsG0880042987.01.T01:CDS
AGTAGCCGGTCTTGTGAAGC+GGG 0.488425 8:-17134056 MsG0880042987.01.T01:CDS
CTCAAACAGATAATGGTTGA+AGG 0.488910 8:+17134081 None:intergenic
AACCACTCAAATGTTGCAAA+AGG 0.489513 8:+17131919 None:intergenic
AGTGCACCTGCCTTAAGCAT+TGG 0.489711 8:+17134484 None:intergenic
GTTGCTCGAATTTGCATTGA+GGG 0.490878 8:-17134151 MsG0880042987.01.T01:CDS
ACTAGTTATCCTTCTCTTGA+GGG 0.494715 8:-17135159 MsG0880042987.01.T01:CDS
AAGATCTGTGGAGACATAAC+CGG 0.495143 8:+17134576 None:intergenic
AGAGTTTCCGGTGATGGTGG+CGG 0.496787 8:+17135309 None:intergenic
AGCAACGCTGTCTGATTCAC+AGG 0.503224 8:+17133071 None:intergenic
CTTTGGTCAGTCTATCCCCT+TGG 0.503293 8:+17133759 None:intergenic
ATCACGATTTCCCCAAATCA+TGG 0.503511 8:-17135569 MsG0880042987.01.T01:CDS
TGGAGACTCACAAATGAGTC+TGG 0.504113 8:+17133385 None:intergenic
TAATTCTCAGGATCTGTGCT+GGG 0.504229 8:-17131974 MsG0880042987.01.T01:intron
TGCATGTAGATTGGTGGGAT+GGG 0.505019 8:+17133890 None:intergenic
GAATGAGTATCCAATGCTTA+AGG 0.506930 8:-17134494 MsG0880042987.01.T01:CDS
CCGAAGCCCTAGCCATCATC+GGG 0.507331 8:-17135593 MsG0880042987.01.T01:CDS
AGTTGACGGCGGCGGCTTGA+CGG 0.507384 8:+17135745 None:intergenic
TCTCAGGATCTGTGCTGGGA+TGG 0.508425 8:-17131970 MsG0880042987.01.T01:intron
TGAGAAACTCTTAATAGTAA+AGG 0.508710 8:-17134338 MsG0880042987.01.T01:CDS
TCCGAAGCCCTAGCCATCAT+CGG 0.509161 8:-17135594 MsG0880042987.01.T01:CDS
AGGGAACTGTGCACAAAGCT+GGG 0.510033 8:+17133130 None:intergenic
GCATCAAGCACTTCTGATCA+AGG 0.510248 8:-17133707 MsG0880042987.01.T01:CDS
GAGGGTGGCAGGCTACGTTA+TGG 0.511357 8:-17134313 MsG0880042987.01.T01:CDS
TGTGGATGAGCTTAGGGCTG+CGG 0.511547 8:-17135115 MsG0880042987.01.T01:CDS
GCAAGTAACTGAAATGCGTA+TGG 0.512567 8:+17133938 None:intergenic
TACTAGTTATCCTTCTCTTG+AGG 0.515638 8:-17135160 MsG0880042987.01.T01:CDS
GGCGAGGGCGAAGTTAGGTT+GGG 0.516568 8:+17135809 None:intergenic
TGGGATTGAGCATTACTGTC+TGG 0.518638 8:-17131950 MsG0880042987.01.T01:three_prime_UTR
ACAGATAATGGTTGAAGGTG+GGG 0.520696 8:+17134086 None:intergenic
ATGACTTGAGGGAACCTCCC+AGG 0.521093 8:+17133110 None:intergenic
TTCCAGATATTAATGATCCC+CGG 0.522021 8:-17133175 MsG0880042987.01.T01:CDS
CCAGATATTGCAGAAAATGT+AGG 0.524692 8:-17133254 MsG0880042987.01.T01:CDS
AATGCAGGAAATTGGGGAAA+GGG 0.526890 8:+17131690 None:intergenic
CATTTGCAGTGATGACTTGA+GGG 0.527183 8:+17133099 None:intergenic
CCCCAGGATGCAGAAGCTGC+AGG 0.528376 8:+17133350 None:intergenic
GACGAGACGGAGGACGGCGA+GGG 0.536397 8:+17135794 None:intergenic
ACTCCAGGCCTTCCTTCAAA+AGG 0.538342 8:-17133798 MsG0880042987.01.T01:CDS
TCACTGTTTCTGGTTAAGCA+TGG 0.538604 8:-17133542 MsG0880042987.01.T01:CDS
AACAGATAATGGTTGAAGGT+GGG 0.538694 8:+17134085 None:intergenic
GGTCTCTCTTTCTACAAAGA+AGG 0.540099 8:-17134605 MsG0880042987.01.T01:CDS
ATAGTTTGTTTGCGGCCGAT+GGG 0.540550 8:-17134915 MsG0880042987.01.T01:CDS
TCTTTATATGGAGAAGAATG+AGG 0.540847 8:-17135076 MsG0880042987.01.T01:CDS
GATAGACTGACCAAAGTACT+TGG 0.541303 8:-17133752 MsG0880042987.01.T01:CDS
CTGCATGTAGATTGGTGGGA+TGG 0.546010 8:+17133889 None:intergenic
AACTAATGCTCGGTTGTAAG+TGG 0.547807 8:+17133037 None:intergenic
GGATCATATGAATGAATGGA+TGG 0.549813 8:-17135205 MsG0880042987.01.T01:CDS
ATGTAGATTGGTGGGATGGG+TGG 0.550873 8:+17133893 None:intergenic
TCCAGATATTAATGATCCCC+GGG 0.552430 8:-17133174 MsG0880042987.01.T01:CDS
ACAGCAGCCGCCACCATCAC+CGG 0.552843 8:-17135316 MsG0880042987.01.T01:CDS
GCCCAGATGTGAGAAACATA+AGG 0.554468 8:+17133632 None:intergenic
TCAAATGTTGCAAAAGGCTG+AGG 0.555939 8:+17131925 None:intergenic
ACATTTGCAGTGATGACTTG+AGG 0.556182 8:+17133098 None:intergenic
TGTTATGAAATGTATTATGA+GGG 0.556990 8:-17134203 MsG0880042987.01.T01:CDS
AATATCTGCATGTAGATTGG+TGG 0.558745 8:+17133884 None:intergenic
TTGCTTGTGAGTTGCTTAAG+GGG 0.562415 8:-17134753 MsG0880042987.01.T01:CDS
CAGTAGCCGGTCTTGTGAAG+CGG 0.563321 8:-17134057 MsG0880042987.01.T01:CDS
TGATTCCGAATGTGAGGTTG+AGG 0.563458 8:-17134864 MsG0880042987.01.T01:CDS
CGGACCAACGGAGACGGAGG+TGG 0.565978 8:+17135715 None:intergenic
GGCGAAGTTAGGTTGGGAGG+AGG 0.567027 8:+17135815 None:intergenic
ACGGATCTGATCGGAGATGG+AGG 0.567473 8:+17135764 None:intergenic
TTGACGGATCTGATCGGAGA+TGG 0.567532 8:+17135761 None:intergenic
GAAATCGTGATTCCCGATGA+TGG 0.567671 8:+17135581 None:intergenic
TGTGAAGCGGGCTTCTGAGA+GGG 0.568121 8:-17134044 MsG0880042987.01.T01:CDS
GATTATCTTCAGCGGACCAA+CGG 0.570535 8:+17135703 None:intergenic
AGCGGAAATGCAGGAAATTG+GGG 0.572270 8:+17131684 None:intergenic
ACTGATTCTCTTCAGACTCT+GGG 0.573743 8:+17134227 None:intergenic
TAATTGCTGTAACCGCAAGC+TGG 0.575073 8:+17134971 None:intergenic
GAGTATCCAATGCTTAAGGC+AGG 0.575297 8:-17134490 MsG0880042987.01.T01:CDS
ATATTTAAGTAAATGTCAGA+AGG 0.575750 8:-17131595 MsG0880042987.01.T01:three_prime_UTR
TATCTGTTTGAGTCAGTAGC+CGG 0.575956 8:-17134070 MsG0880042987.01.T01:CDS
ATGAGAATAACAGTAAATCT+CGG 0.576138 8:+17131787 None:intergenic
AGAACAAGACAGGGTTGAGG+AGG 0.576975 8:-17133288 MsG0880042987.01.T01:CDS
ATTATACCGCAGATTTGTCA+GGG 0.577085 8:-17134892 MsG0880042987.01.T01:CDS
TCGCACTAAATATATCAGGC+TGG 0.577096 8:+17133486 None:intergenic
GGATTGTGCGATATATTTGG+TGG 0.577400 8:-17134626 MsG0880042987.01.T01:CDS
TTAAGAGTTTCCGGTGATGG+TGG 0.580177 8:+17135306 None:intergenic
TTCAGCGACGAGACGGAGGA+CGG 0.581545 8:+17135788 None:intergenic
GTGATTCCCGATGATGGCTA+GGG 0.582960 8:+17135587 None:intergenic
TATCAAAAGAAGTAGCATTG+AGG 0.583401 8:-17134432 MsG0880042987.01.T01:CDS
ATCGCACATTCACCATGGAA+TGG 0.583806 8:-17135935 MsG0880042987.01.T01:exon
AGAAGCCCGCTTCACAAGAC+CGG 0.584077 8:+17134051 None:intergenic
ATCATATTGAGTATATTAGG+AGG 0.584593 8:-17134813 MsG0880042987.01.T01:CDS
AATTTCTGTGACTCGAAAAG+CGG 0.584834 8:+17135282 None:intergenic
GAAGCGAGGGCCATGATTTG+GGG 0.585140 8:+17135559 None:intergenic
GACAGTATTATTTCAAGCCG+AGG 0.585780 8:+17133983 None:intergenic
AGTGAGTGTGAAATATATAA+CGG 0.586562 8:+17136001 None:intergenic
TTTGGTTCGTTTCCTTGCTG+CGG 0.587294 8:-17134398 MsG0880042987.01.T01:CDS
CGCGTCGTTGATTGACGCTG+CGG 0.589913 8:-17135343 MsG0880042987.01.T01:CDS
CGACGAGACGGAGGACGGCG+AGG 0.590663 8:+17135793 None:intergenic
GAGGTTGAGGGAGGATGATG+AGG 0.591211 8:-17134851 MsG0880042987.01.T01:CDS
TGCATCCTGGGGTAAAATGG+TGG 0.591851 8:-17133339 MsG0880042987.01.T01:CDS
TCAGCACTCCCCTCAAGAGA+AGG 0.592983 8:+17135150 None:intergenic
AGGCCTGGAGTAGACGCACA+AGG 0.593702 8:+17133810 None:intergenic
GGGATCATTAATATCTGGAA+GGG 0.594843 8:+17133178 None:intergenic
AAACAGATAATGGTTGAAGG+TGG 0.595794 8:+17134084 None:intergenic
AACTTACTCAAACTAATGCT+CGG 0.596616 8:+17133027 None:intergenic
AATCACTACCATTTGCTCAA+AGG 0.597699 8:+17131646 None:intergenic
TGACTTGAGGGAACCTCCCA+GGG 0.597802 8:+17133111 None:intergenic
AACAAGTTCCGGAAGAAGCG+AGG 0.599510 8:+17135545 None:intergenic
GGCGGCTTGACGGATCTGAT+CGG 0.600085 8:+17135755 None:intergenic
GGAGAGGAGAGAGAGTGTGG+AGG 0.600742 8:+17135877 None:intergenic
TATTTAAGTAAATGTCAGAA+GGG 0.601539 8:-17131594 MsG0880042987.01.T01:three_prime_UTR
AAATGCAGGAAATTGGGGAA+AGG 0.601789 8:+17131689 None:intergenic
TGGAGGGTTCAGCGACGAGA+CGG 0.603655 8:+17135781 None:intergenic
GGATCATTAATATCTGGAAG+GGG 0.603768 8:+17133179 None:intergenic
AAGCTCCTTTAATGCAAACC+CGG 0.603899 8:-17134668 MsG0880042987.01.T01:CDS
ACAAGTTCCGGAAGAAGCGA+GGG 0.604193 8:+17135546 None:intergenic
GATTGTCCCTGAGTTGCAAA+AGG 0.605068 8:-17134524 MsG0880042987.01.T01:CDS
CGGATCTGATCGGAGATGGA+GGG 0.605850 8:+17135765 None:intergenic
TGCAGGAAATTGGGGAAAGG+GGG 0.607711 8:+17131692 None:intergenic
TTAGAGAGCTCCAGAGAAGG+CGG 0.607962 8:-17133601 MsG0880042987.01.T01:CDS
TTCTCGGCAAGAACAAGACA+GGG 0.608184 8:-17133297 MsG0880042987.01.T01:CDS
TCATATTGAGTATATTAGGA+GGG 0.608345 8:-17134812 MsG0880042987.01.T01:CDS
GCACCAAATGAGATCAGCCA+AGG 0.608644 8:-17133776 MsG0880042987.01.T01:CDS
TATATTAGGAGGGATATGGA+AGG 0.611021 8:-17134802 MsG0880042987.01.T01:CDS
CCCTAATCGCACATTCACCA+TGG 0.613496 8:-17135940 MsG0880042987.01.T01:exon
TTGGTGGCGGAGAGCATGAG+AGG 0.615233 8:+17135636 None:intergenic
AAAACCACCTCCGTCTCCGT+TGG 0.615604 8:-17135719 MsG0880042987.01.T01:CDS
TTGTGAAGCGGGCTTCTGAG+AGG 0.615980 8:-17134045 MsG0880042987.01.T01:CDS
TGTTGCTCGAATTTGCATTG+AGG 0.616016 8:-17134152 MsG0880042987.01.T01:CDS
ACTAAATATATCAGGCTGGA+CGG 0.616909 8:+17133490 None:intergenic
ACAGAAGTATACTCGACAGT+AGG 0.618145 8:+17131884 None:intergenic
CTAGTTATCCTTCTCTTGAG+GGG 0.618255 8:-17135158 MsG0880042987.01.T01:CDS
ACTCTTAATAGTAAAGGACG+AGG 0.618274 8:-17134332 MsG0880042987.01.T01:CDS
TCCAACTTTACAGTGCTGGA+AGG 0.619429 8:-17133214 MsG0880042987.01.T01:CDS
GTGATCTTGATACAAGGAGG+AGG 0.620319 8:-17134777 MsG0880042987.01.T01:CDS
GATTCCGAATGTGAGGTTGA+GGG 0.620733 8:-17134863 MsG0880042987.01.T01:CDS
ACAGTATTATTTCAAGCCGA+GGG 0.621118 8:+17133984 None:intergenic
GTATACTCGACAGTAGGCAG+AGG 0.621319 8:+17131890 None:intergenic
CAAGTAACTGAAATGCGTAT+GGG 0.621742 8:+17133939 None:intergenic
CTTCAGCGGACCAACGGAGA+CGG 0.622307 8:+17135709 None:intergenic
CACCAAATGAGATCAGCCAA+GGG 0.623350 8:-17133775 MsG0880042987.01.T01:CDS
ATATCTGCATGTAGATTGGT+GGG 0.627188 8:+17133885 None:intergenic
TTGAACATCAACAAGATCTG+TGG 0.627448 8:+17134564 None:intergenic
TTTGTGCACAGTTCCCTGGG+AGG 0.632283 8:-17133124 MsG0880042987.01.T01:CDS
AAACCCGGTGGCGAATTGGA+AGG 0.633015 8:-17134653 MsG0880042987.01.T01:CDS
CCTGCAGCTTCTGCATCCTG+GGG 0.635126 8:-17133350 MsG0880042987.01.T01:CDS
AGGCATGCATGCTCAACAAG+CGG 0.635282 8:+17131666 None:intergenic
AAGGTAGTGATCTTGATACA+AGG 0.638914 8:-17134783 MsG0880042987.01.T01:CDS
CAGCGGACCAACGGAGACGG+AGG 0.640762 8:+17135712 None:intergenic
ACTGTAAAGTTGGACGAAGG+TGG 0.642580 8:+17133223 None:intergenic
GGGGATCATTAATATCTGGA+AGG 0.642825 8:+17133177 None:intergenic
GACTAGTCGTGACCAGCTTG+CGG 0.643562 8:-17134983 MsG0880042987.01.T01:CDS
AAGATTCGGAATCCAGAACT+GGG 0.643798 8:+17133457 None:intergenic
TTGCTCGAATTTGCATTGAG+GGG 0.644156 8:-17134150 MsG0880042987.01.T01:CDS
GCAAGAACAAGACAGGGTTG+AGG 0.647585 8:-17133291 MsG0880042987.01.T01:CDS
AGGAGAGAGAGGATTCGGCA+TGG 0.649997 8:+17135841 None:intergenic
CAACATTTGACTCCGCAGCA+AGG 0.650912 8:+17134386 None:intergenic
GGCCTGGAGTAGACGCACAA+GGG 0.654528 8:+17133811 None:intergenic
TTATATGGAGAAGAATGAGG+AGG 0.657740 8:-17135073 MsG0880042987.01.T01:CDS
TGAATATCAAGAGAGACTTG+AGG 0.658051 8:+17133567 None:intergenic
GATCATATGAATGAATGGAT+GGG 0.659145 8:-17135204 MsG0880042987.01.T01:CDS
GAGGATTCGGCATGGCGGCG+GGG 0.661516 8:+17135849 None:intergenic
AATCTGCGGTATAATCCCAT+CGG 0.662771 8:+17134900 None:intergenic
AGGGTTCAGCGACGAGACGG+AGG 0.675337 8:+17135784 None:intergenic
TTATACCGCAGATTTGTCAG+GGG 0.685030 8:-17134891 MsG0880042987.01.T01:CDS
TGTGGAGGAAGCATTCGGAG+AGG 0.686501 8:+17135892 None:intergenic
TTAATAGTAAAGGACGAGGG+TGG 0.686705 8:-17134328 MsG0880042987.01.T01:CDS
GGATTGTGATTCCGAATGTG+AGG 0.687428 8:-17134870 MsG0880042987.01.T01:CDS
CTCCTTTAATGCAAACCCGG+TGG 0.691872 8:-17134665 MsG0880042987.01.T01:CDS
CGCAGCGTCAATCAACGACG+CGG 0.696713 8:+17135344 None:intergenic
CCGCCATAAAATCACGACAC+CGG 0.700241 8:+17131817 None:intergenic
GAGGATTGGATTATCTTCAG+CGG 0.701611 8:+17135695 None:intergenic
TCCGAATGTGAGGTTGAGGG+AGG 0.708339 8:-17134860 MsG0880042987.01.T01:CDS
GATCATTAATATCTGGAAGG+GGG 0.710644 8:+17133180 None:intergenic
ACAATCCCCTGACAAATCTG+CGG 0.710797 8:+17134886 None:intergenic
AGAGAGAGGATTCGGCATGG+CGG 0.710867 8:+17135844 None:intergenic
GTAGTGATCTTGATACAAGG+AGG 0.711592 8:-17134780 MsG0880042987.01.T01:CDS
CTCTTAATAGTAAAGGACGA+GGG 0.713370 8:-17134331 MsG0880042987.01.T01:CDS
ACCAAATGAGATCAGCCAAG+GGG 0.717940 8:-17133774 MsG0880042987.01.T01:CDS
GGTGGCGAATTGGAAGGACA+AGG 0.722542 8:-17134647 MsG0880042987.01.T01:CDS
AGCACTGTAAAGTTGGACGA+AGG 0.726072 8:+17133220 None:intergenic
GAGGGCGAAGTTAGGTTGGG+AGG 0.730306 8:+17135812 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTTATTTGATTATTA+TGG - Chr8:17135068-17135087 MsG0880042987.01.T01:CDS 10.0%
!! AGATATAAATAGACAAAAAA+GGG + Chr8:17134906-17134925 None:intergenic 15.0%
!! ATGTATCTCAAAATATATTA+AGG + Chr8:17134685-17134704 None:intergenic 15.0%
!! TGAAATTATATAAAGATTGA+TGG + Chr8:17135288-17135307 None:intergenic 15.0%
!! TGAGAATATTAATCTTTATA+TGG - Chr8:17132527-17132546 MsG0880042987.01.T01:intron 15.0%
!! TGTATCTCAAAATATATTAA+GGG + Chr8:17134684-17134703 None:intergenic 15.0%
!!! TTTAGTGTAAATTTTTTTCA+TGG - Chr8:17135900-17135919 MsG0880042987.01.T01:CDS 15.0%
!! AATATATTAAGGGTAGATTA+AGG + Chr8:17134674-17134693 None:intergenic 20.0%
!! AATTTAAATACTAAACATCC+AGG + Chr8:17135217-17135236 None:intergenic 20.0%
!! ATATTTAAGTAAATGTCAGA+AGG - Chr8:17136020-17136039 MsG0880042987.01.T01:five_prime_UTR 20.0%
!! ATGTTATGAAATGTATTATG+AGG - Chr8:17133411-17133430 MsG0880042987.01.T01:CDS 20.0%
!! CAATCTTTATATAATTTCAC+CGG - Chr8:17135289-17135308 MsG0880042987.01.T01:CDS 20.0%
!! CAGATATAAATAGACAAAAA+AGG + Chr8:17134907-17134926 None:intergenic 20.0%
!! GTAATATTTATCTGCTTTAT+TGG - Chr8:17134840-17134859 MsG0880042987.01.T01:CDS 20.0%
!! TATTTAAGTAAATGTCAGAA+GGG - Chr8:17136021-17136040 MsG0880042987.01.T01:five_prime_UTR 20.0%
!! TGAATCATATTGAGTATATT+AGG - Chr8:17132799-17132818 MsG0880042987.01.T01:intron 20.0%
!! TGTTATGAAATGTATTATGA+GGG - Chr8:17133412-17133431 MsG0880042987.01.T01:CDS 20.0%
!!! TTCCATGTTTCATTTTATAT+GGG - Chr8:17135024-17135043 MsG0880042987.01.T01:CDS 20.0%
!!! TTTCCATGTTTCATTTTATA+TGG - Chr8:17135023-17135042 MsG0880042987.01.T01:CDS 20.0%
! AAAATCGCACTAAATATATC+AGG + Chr8:17134136-17134155 None:intergenic 25.0%
! AACGATATATAAAGCTTGAT+TGG + Chr8:17134779-17134798 None:intergenic 25.0%
! AGTGAGTGTGAAATATATAA+CGG + Chr8:17131617-17131636 None:intergenic 25.0%
! ATCATATTGAGTATATTAGG+AGG - Chr8:17132802-17132821 MsG0880042987.01.T01:intron 25.0%
! ATGAAGAAACAAAAAATTCC+CGG + Chr8:17134462-17134481 None:intergenic 25.0%
! ATGAGAATAACAGTAAATCT+CGG + Chr8:17135831-17135850 None:intergenic 25.0%
! ATGCAGAATAAAATAACAAC+TGG + Chr8:17134730-17134749 None:intergenic 25.0%
! GAAAAATTCAGTTACATCAT+TGG + Chr8:17133657-17133676 None:intergenic 25.0%
! GAGAAAGATAATAAACTGTT+TGG - Chr8:17135382-17135401 MsG0880042987.01.T01:CDS 25.0%
! TAAACATGTGATCTTTAATC+AGG - Chr8:17135609-17135628 MsG0880042987.01.T01:CDS 25.0%
! TCATATTGAGTATATTAGGA+GGG - Chr8:17132803-17132822 MsG0880042987.01.T01:intron 25.0%
! TGAGAAACTCTTAATAGTAA+AGG - Chr8:17133277-17133296 MsG0880042987.01.T01:CDS 25.0%
! TTTCTTAAAAATCGAATTCG+CGG + Chr8:17132157-17132176 None:intergenic 25.0%
!! AATTATCATCCAATTTTTGC+CGG - Chr8:17135779-17135798 MsG0880042987.01.T01:CDS 25.0%
!! ATTCTCATTTTGAATTCTGT+AGG - Chr8:17135843-17135862 MsG0880042987.01.T01:CDS 25.0%
!! TCCATGTTTCATTTTATATG+GGG - Chr8:17135025-17135044 MsG0880042987.01.T01:CDS 25.0%
!!! AGAAGTTTTGGTTTGAAAAA+TGG + Chr8:17131640-17131659 None:intergenic 25.0%
!!! AGGCATTTATTTTAATTCTC+AGG - Chr8:17135629-17135648 MsG0880042987.01.T01:CDS 25.0%
!!! CTTCTTTTGATATTTGAGAT+CGG + Chr8:17133175-17133194 None:intergenic 25.0%
!!! GGAATTTTTTGTTTCTTCAT+TGG - Chr8:17134462-17134481 MsG0880042987.01.T01:CDS 25.0%
!!! TGATTAAGTTTTTTCTTGGT+TGG - Chr8:17135355-17135374 MsG0880042987.01.T01:CDS 25.0%
!!! TGTGTGATTAAGTTTTTTCT+TGG - Chr8:17135351-17135370 MsG0880042987.01.T01:CDS 25.0%
AAATGTATTATGAGGGTTCT+TGG - Chr8:17133419-17133438 MsG0880042987.01.T01:CDS 30.0%
AACTTACTCAAACTAATGCT+CGG + Chr8:17134591-17134610 None:intergenic 30.0%
AATACATGACTACAGTGATA+CGG + Chr8:17135126-17135145 None:intergenic 30.0%
AGACTTATATATGCTTCTGA+AGG - Chr8:17135497-17135516 MsG0880042987.01.T01:CDS 30.0%
AGTATTACCATCAAATCAAG+AGG + Chr8:17135001-17135020 None:intergenic 30.0%
ATATGATCCTCAAAAAACTC+AGG + Chr8:17132399-17132418 None:intergenic 30.0%
GACTTATATATGCTTCTGAA+GGG - Chr8:17135498-17135517 MsG0880042987.01.T01:CDS 30.0%
GATCATATGAATGAATGGAT+GGG - Chr8:17132411-17132430 MsG0880042987.01.T01:intron 30.0%
TAAAATCCCAATAGACCAAA+TGG + Chr8:17135884-17135903 None:intergenic 30.0%
TATCAAAAGAAGTAGCATTG+AGG - Chr8:17133183-17133202 MsG0880042987.01.T01:CDS 30.0%
TCAAATATCTGCATGTAGAT+TGG + Chr8:17133737-17133756 None:intergenic 30.0%
TCCCCATATAAAATGAAACA+TGG + Chr8:17135029-17135048 None:intergenic 30.0%
TCTTTATATGGAGAAGAATG+AGG - Chr8:17132539-17132558 MsG0880042987.01.T01:intron 30.0%
TGAAGAAACAAAAAATTCCC+GGG + Chr8:17134461-17134480 None:intergenic 30.0%
TGCACTAAAATTTGCAAGAA+CGG - Chr8:17134949-17134968 MsG0880042987.01.T01:CDS 30.0%
TGGATTTCTCATTGAACTTA+AGG - Chr8:17135088-17135107 MsG0880042987.01.T01:CDS 30.0%
TTGAGAAAAATCTCAAGCAA+AGG + Chr8:17132249-17132268 None:intergenic 30.0%
TTGAGGATCATATGAATGAA+TGG - Chr8:17132406-17132425 MsG0880042987.01.T01:intron 30.0%
! AGCAATTAAGTTTTTGACGA+CGG - Chr8:17132659-17132678 MsG0880042987.01.T01:intron 30.0%
! ATTGAGGTTTTTACCTGATT+TGG - Chr8:17133199-17133218 MsG0880042987.01.T01:CDS 30.0%
! TTCATCTTTCTCCTTTTGTT+TGG - Chr8:17135432-17135451 MsG0880042987.01.T01:CDS 30.0%
!! GCTTGATTTGAAGTATTGTT+TGG - Chr8:17132209-17132228 MsG0880042987.01.T01:intron 30.0%
!! TCTGTTTTGAATGTGCTTAT+TGG - Chr8:17134629-17134648 MsG0880042987.01.T01:CDS 30.0%
!! TGTTCATCATAGTTTGTTTG+CGG - Chr8:17132692-17132711 MsG0880042987.01.T01:intron 30.0%
!! TTTTGTTCCTCTTGATTTGA+TGG - Chr8:17134991-17135010 MsG0880042987.01.T01:CDS 30.0%
!!! TTAAGTTTTTTCTTGGTTGG+AGG - Chr8:17135358-17135377 MsG0880042987.01.T01:CDS 30.0%
AAAAGCGGTTTAAGAGTTTC+CGG + Chr8:17132321-17132340 None:intergenic 35.0%
AACCACTCAAATGTTGCAAA+AGG + Chr8:17135699-17135718 None:intergenic 35.0%
AAGGTAGTGATCTTGATACA+AGG - Chr8:17132832-17132851 MsG0880042987.01.T01:intron 35.0%
AATATCTGCATGTAGATTGG+TGG + Chr8:17133734-17133753 None:intergenic 35.0%
AATCACTACCATTTGCTCAA+AGG + Chr8:17135972-17135991 None:intergenic 35.0%
AATTTCTGTGACTCGAAAAG+CGG + Chr8:17132336-17132355 None:intergenic 35.0%
ACACTATGGAAGTCAATGAT+GGG + Chr8:17135164-17135183 None:intergenic 35.0%
ACAGTATTATTTCAAGCCGA+GGG + Chr8:17133634-17133653 None:intergenic 35.0%
ACTAAATATATCAGGCTGGA+CGG + Chr8:17134128-17134147 None:intergenic 35.0%
ACTAGTTATCCTTCTCTTGA+GGG - Chr8:17132456-17132475 MsG0880042987.01.T01:intron 35.0%
ACTCTTAATAGTAAAGGACG+AGG - Chr8:17133283-17133302 MsG0880042987.01.T01:CDS 35.0%
AGTCACAGAAATTGTGTTGT+AGG - Chr8:17132343-17132362 MsG0880042987.01.T01:intron 35.0%
ATATCTGCATGTAGATTGGT+GGG + Chr8:17133733-17133752 None:intergenic 35.0%
ATTATACCGCAGATTTGTCA+GGG - Chr8:17132723-17132742 MsG0880042987.01.T01:intron 35.0%
ATTGCTTGTGAGTTGCTTAA+GGG - Chr8:17132861-17132880 MsG0880042987.01.T01:intron 35.0%
CAAAAACAGACACAAGAGTT+GGG + Chr8:17133598-17133617 None:intergenic 35.0%
CAAAATACCCACAGCTAAAA+GGG + Chr8:17134804-17134823 None:intergenic 35.0%
CAAGGATTGTGCGATATATT+TGG - Chr8:17132986-17133005 MsG0880042987.01.T01:intron 35.0%
CAAGTAACTGAAATGCGTAT+GGG + Chr8:17133679-17133698 None:intergenic 35.0%
CCAGATATTGCAGAAAATGT+AGG - Chr8:17134361-17134380 MsG0880042987.01.T01:CDS 35.0%
CCAGTAATCAGCTTAAGATT+CGG + Chr8:17134175-17134194 None:intergenic 35.0%
CGCAAAATGAATTCACACTA+TGG + Chr8:17135178-17135197 None:intergenic 35.0%
CTCTTAATAGTAAAGGACGA+GGG - Chr8:17133284-17133303 MsG0880042987.01.T01:CDS 35.0%
GAAGAAACAAAAAATTCCCG+GGG + Chr8:17134460-17134479 None:intergenic 35.0%
GAATGAGTATCCAATGCTTA+AGG - Chr8:17133121-17133140 MsG0880042987.01.T01:CDS 35.0%
GATATTCAGTTCACTGTTTC+TGG - Chr8:17134063-17134082 MsG0880042987.01.T01:CDS 35.0%
GATCATTAATATCTGGAAGG+GGG + Chr8:17134438-17134457 None:intergenic 35.0%
GGATCATATGAATGAATGGA+TGG - Chr8:17132410-17132429 MsG0880042987.01.T01:intron 35.0%
GGATCATTAATATCTGGAAG+GGG + Chr8:17134439-17134458 None:intergenic 35.0%
GGGATCATTAATATCTGGAA+GGG + Chr8:17134440-17134459 None:intergenic 35.0%
GGTAGATTAAGGAAAAGTCA+TGG + Chr8:17134663-17134682 None:intergenic 35.0%
GTATTGTGACACTTCTTTCT+CGG - Chr8:17134302-17134321 MsG0880042987.01.T01:CDS 35.0%
GTCAAATATGCCAAGTACTT+TGG + Chr8:17133876-17133895 None:intergenic 35.0%
TAAGTAAATGTCAGAAGGGT+TGG - Chr8:17136025-17136044 MsG0880042987.01.T01:five_prime_UTR 35.0%
TACTAGTTATCCTTCTCTTG+AGG - Chr8:17132455-17132474 MsG0880042987.01.T01:intron 35.0%
TATATTAGGAGGGATATGGA+AGG - Chr8:17132813-17132832 MsG0880042987.01.T01:intron 35.0%
TCAAAAACAGACACAAGAGT+TGG + Chr8:17133599-17133618 None:intergenic 35.0%
TGAATATCAAGAGAGACTTG+AGG + Chr8:17134051-17134070 None:intergenic 35.0%
TGAGTATATTAGGAGGGATA+TGG - Chr8:17132809-17132828 MsG0880042987.01.T01:intron 35.0%
TTATATGGAGAAGAATGAGG+AGG - Chr8:17132542-17132561 MsG0880042987.01.T01:intron 35.0%
TTCCAGATATTAATGATCCC+CGG - Chr8:17134440-17134459 MsG0880042987.01.T01:CDS 35.0%
TTGAACATCAACAAGATCTG+TGG + Chr8:17133054-17133073 None:intergenic 35.0%
! AAACAGATAATGGTTGAAGG+TGG + Chr8:17133534-17133553 None:intergenic 35.0%
! AACAGATAATGGTTGAAGGT+GGG + Chr8:17133533-17133552 None:intergenic 35.0%
! ACCATTGATTGAAGCGTAAT+CGG + Chr8:17132124-17132143 None:intergenic 35.0%
! CCTACATTTTCTGCAATATC+TGG + Chr8:17134364-17134383 None:intergenic 35.0%
! CTCAAACAGATAATGGTTGA+AGG + Chr8:17133537-17133556 None:intergenic 35.0%
! GAGCATTAGTTTGAGTAAGT+TGG - Chr8:17134590-17134609 MsG0880042987.01.T01:CDS 35.0%
! TGCATTCATCTCAGTTCTTT+TGG - Chr8:17134745-17134764 MsG0880042987.01.T01:CDS 35.0%
! TGTGTTGAGAAGAGAAGTTT+TGG + Chr8:17131652-17131671 None:intergenic 35.0%
! TTATTGGTAGCAACTAGCAA+GGG - Chr8:17134856-17134875 MsG0880042987.01.T01:CDS 35.0%
! TTCATCAGCATTGAGAAAAC+TGG + Chr8:17133344-17133363 None:intergenic 35.0%
! TTCTTTTGTCACCTGATTCT+TGG - Chr8:17133759-17133778 MsG0880042987.01.T01:CDS 35.0%
! TTTATTGGTAGCAACTAGCA+AGG - Chr8:17134855-17134874 MsG0880042987.01.T01:CDS 35.0%
! TTTGTTCCTTTTCAGAATCG+AGG + Chr8:17131942-17131961 None:intergenic 35.0%
!! ATCTTTCTCCTTTTGTTTGG+TGG - Chr8:17135435-17135454 MsG0880042987.01.T01:CDS 35.0%
!! CTACTGACTCAAACAGATAA+TGG + Chr8:17133544-17133563 None:intergenic 35.0%
!! CTTGTTGCTAGTCTTCAAAA+AGG - Chr8:17132087-17132106 MsG0880042987.01.T01:intron 35.0%
!! TCTTTCTCCTTTTGTTTGGT+GGG - Chr8:17135436-17135455 MsG0880042987.01.T01:CDS 35.0%
AAATGCAGGAAATTGGGGAA+AGG + Chr8:17135929-17135948 None:intergenic 40.0%
AACTAATGCTCGGTTGTAAG+TGG + Chr8:17134581-17134600 None:intergenic 40.0%
AAGATCTGTGGAGACATAAC+CGG + Chr8:17133042-17133061 None:intergenic 40.0%
AAGATTCGGAATCCAGAACT+GGG + Chr8:17134161-17134180 None:intergenic 40.0%
AAGCGGAAATGCAGGAAATT+GGG + Chr8:17135935-17135954 None:intergenic 40.0%
AAGCTCCTTTAATGCAAACC+CGG - Chr8:17132947-17132966 MsG0880042987.01.T01:intron 40.0%
AATCTGCGGTATAATCCCAT+CGG + Chr8:17132718-17132737 None:intergenic 40.0%
AATGCAGGAAATTGGGGAAA+GGG + Chr8:17135928-17135947 None:intergenic 40.0%
ACATTTGCAGTGATGACTTG+AGG + Chr8:17134520-17134539 None:intergenic 40.0%
AGAGGAATTGGAGAGTTTGT+TGG + Chr8:17131708-17131727 None:intergenic 40.0%
ATCACGATTTCCCCAAATCA+TGG - Chr8:17132046-17132065 MsG0880042987.01.T01:intron 40.0%
ATGAATGGATGGGTGAGTTT+AGG - Chr8:17132421-17132440 MsG0880042987.01.T01:intron 40.0%
CACACTATGGAAGTCAATGA+TGG + Chr8:17135165-17135184 None:intergenic 40.0%
CATTTGCAGTGATGACTTGA+GGG + Chr8:17134519-17134538 None:intergenic 40.0%
CCAAAATACCCACAGCTAAA+AGG + Chr8:17134805-17134824 None:intergenic 40.0%
CCGAATCTTAAGCTGATTAC+TGG - Chr8:17134172-17134191 MsG0880042987.01.T01:CDS 40.0%
CTAGTTATCCTTCTCTTGAG+GGG - Chr8:17132457-17132476 MsG0880042987.01.T01:intron 40.0%
CTTACTACCCACCAAACAAA+AGG + Chr8:17135446-17135465 None:intergenic 40.0%
GAAGAATGAGGAGGAGTTTA+AGG - Chr8:17132551-17132570 MsG0880042987.01.T01:intron 40.0%
GACAGTATTATTTCAAGCCG+AGG + Chr8:17133635-17133654 None:intergenic 40.0%
GAGGATTGGATTATCTTCAG+CGG + Chr8:17131923-17131942 None:intergenic 40.0%
GATTATACCGCAGATTTGTC+AGG - Chr8:17132722-17132741 MsG0880042987.01.T01:intron 40.0%
GATTGCTTGTGAGTTGCTTA+AGG - Chr8:17132860-17132879 MsG0880042987.01.T01:intron 40.0%
GCAAGTAACTGAAATGCGTA+TGG + Chr8:17133680-17133699 None:intergenic 40.0%
GCCTTATGTTTCTCACATCT+GGG - Chr8:17133982-17134001 MsG0880042987.01.T01:CDS 40.0%
GGATTGTGCGATATATTTGG+TGG - Chr8:17132989-17133008 MsG0880042987.01.T01:intron 40.0%
GGGGATCATTAATATCTGGA+AGG + Chr8:17134441-17134460 None:intergenic 40.0%
GGTCTCTCTTTCTACAAAGA+AGG - Chr8:17133010-17133029 MsG0880042987.01.T01:intron 40.0%
GTAGTGATCTTGATACAAGG+AGG - Chr8:17132835-17132854 MsG0880042987.01.T01:intron 40.0%
GTTGCTCGAATTTGCATTGA+GGG - Chr8:17133464-17133483 MsG0880042987.01.T01:CDS 40.0%
TAAGATTCGGAATCCAGAAC+TGG + Chr8:17134162-17134181 None:intergenic 40.0%
TAATTCTCAGGATCTGTGCT+GGG - Chr8:17135641-17135660 MsG0880042987.01.T01:CDS 40.0%
TACTCTCCTCTTCTCATGTT+TGG - Chr8:17135543-17135562 MsG0880042987.01.T01:CDS 40.0%
TATCTGTTTGAGTCAGTAGC+CGG - Chr8:17133545-17133564 MsG0880042987.01.T01:CDS 40.0%
TCAAATGTTGCAAAAGGCTG+AGG + Chr8:17135693-17135712 None:intergenic 40.0%
TCCAGATATTAATGATCCCC+GGG - Chr8:17134441-17134460 MsG0880042987.01.T01:CDS 40.0%
TCCGATTACGCTTCAATCAA+TGG - Chr8:17132120-17132139 MsG0880042987.01.T01:intron 40.0%
TCGCACTAAATATATCAGGC+TGG + Chr8:17134132-17134151 None:intergenic 40.0%
TGAAGACTAGCAACAAGTTC+CGG + Chr8:17132084-17132103 None:intergenic 40.0%
TGTTGCTCGAATTTGCATTG+AGG - Chr8:17133463-17133482 MsG0880042987.01.T01:CDS 40.0%
TTAATAGTAAAGGACGAGGG+TGG - Chr8:17133287-17133306 MsG0880042987.01.T01:CDS 40.0%
TTAATTCTCAGGATCTGTGC+TGG - Chr8:17135640-17135659 MsG0880042987.01.T01:CDS 40.0%
TTATACCGCAGATTTGTCAG+GGG - Chr8:17132724-17132743 MsG0880042987.01.T01:intron 40.0%
TTATTTCAAGCCGAGGGAAA+AGG + Chr8:17133628-17133647 None:intergenic 40.0%
TTCACTCCAAACATGAGAAG+AGG + Chr8:17135552-17135571 None:intergenic 40.0%
TTGCTCGAATTTGCATTGAG+GGG - Chr8:17133465-17133484 MsG0880042987.01.T01:CDS 40.0%
TTGCTGTGTGGACTTTGTTA+GGG - Chr8:17132595-17132614 MsG0880042987.01.T01:intron 40.0%
TTGCTTGTGAGTTGCTTAAG+GGG - Chr8:17132862-17132881 MsG0880042987.01.T01:intron 40.0%
! ACAGAAGTATACTCGACAGT+AGG + Chr8:17135734-17135753 None:intergenic 40.0%
! ACAGATAATGGTTGAAGGTG+GGG + Chr8:17133532-17133551 None:intergenic 40.0%
! ACTGATTCTCTTCAGACTCT+GGG + Chr8:17133391-17133410 None:intergenic 40.0%
! AGCCTTTTGCAACATTTGAG+TGG - Chr8:17135694-17135713 MsG0880042987.01.T01:CDS 40.0%
! CATGTGTTTGAAGTGCCATT+TGG - Chr8:17135866-17135885 MsG0880042987.01.T01:CDS 40.0%
! CTGAGATTGGATTTTGTTGG+TGG + Chr8:17131998-17132017 None:intergenic 40.0%
! GAGCTGAGATTGGATTTTGT+TGG + Chr8:17132001-17132020 None:intergenic 40.0%
! GATAGACTGACCAAAGTACT+TGG - Chr8:17133863-17133882 MsG0880042987.01.T01:CDS 40.0%
! TCCAATCCTCGATTCTGAAA+AGG - Chr8:17131933-17131952 MsG0880042987.01.T01:three_prime_UTR 40.0%
! TCCTTTTCAGAATCGAGGAT+TGG + Chr8:17131937-17131956 None:intergenic 40.0%
! TTGAAACAAGCCTTTTCCCT+CGG - Chr8:17133615-17133634 MsG0880042987.01.T01:CDS 40.0%
!! AGATTGGATTTTGTTGGTGG+CGG + Chr8:17131995-17132014 None:intergenic 40.0%
!! AGTTTGTTGGTTCCATTCCA+TGG + Chr8:17131695-17131714 None:intergenic 40.0%
!! CCTTTTAGCTGTGGGTATTT+TGG - Chr8:17134802-17134821 MsG0880042987.01.T01:CDS 40.0%
!! GAAGTGCCATTTGGTCTATT+GGG - Chr8:17135875-17135894 MsG0880042987.01.T01:CDS 40.0%
!! TACTGATTCTCTTCAGACTC+TGG + Chr8:17133392-17133411 None:intergenic 40.0%
!! TCACTGTTTCTGGTTAAGCA+TGG - Chr8:17134073-17134092 MsG0880042987.01.T01:CDS 40.0%
!! TGAAGTGCCATTTGGTCTAT+TGG - Chr8:17135874-17135893 MsG0880042987.01.T01:CDS 40.0%
!! TTTTTAGAGAGCTCCAGAGA+AGG - Chr8:17134011-17134030 MsG0880042987.01.T01:CDS 40.0%
!!! AGAGTTGCCTGAGTTTTTTG+AGG - Chr8:17132389-17132408 MsG0880042987.01.T01:intron 40.0%
!!! ATGATTTTGCACTTGCTGTG+TGG - Chr8:17132583-17132602 MsG0880042987.01.T01:intron 40.0%
!!! ATTTGGTGCCTTTTGAAGGA+AGG + Chr8:17133828-17133847 None:intergenic 40.0%
!!! GAGGTGGTTTTTGAAGTTGA+CGG + Chr8:17131887-17131906 None:intergenic 40.0%
!!! TCTCATTTGGTGCCTTTTGA+AGG + Chr8:17133832-17133851 None:intergenic 40.0%
ACAATCCCCTGACAAATCTG+CGG + Chr8:17132732-17132751 None:intergenic 45.0%
ACCAAATGAGATCAGCCAAG+GGG - Chr8:17133841-17133860 MsG0880042987.01.T01:CDS 45.0%
ACTGTAAAGTTGGACGAAGG+TGG + Chr8:17134395-17134414 None:intergenic 45.0%
AGCACTGTAAAGTTGGACGA+AGG + Chr8:17134398-17134417 None:intergenic 45.0%
AGCGGAAATGCAGGAAATTG+GGG + Chr8:17135934-17135953 None:intergenic 45.0%
ATCACGACACCGGCAAAAAT+TGG + Chr8:17135791-17135810 None:intergenic 45.0%
ATCGCACATTCACCATGGAA+TGG - Chr8:17131680-17131699 MsG0880042987.01.T01:three_prime_UTR 45.0%
ATGCAGGAAATTGGGGAAAG+GGG + Chr8:17135927-17135946 None:intergenic 45.0%
CAAGCGGAAATGCAGGAAAT+TGG + Chr8:17135936-17135955 None:intergenic 45.0%
CACCAAATGAGATCAGCCAA+GGG - Chr8:17133840-17133859 MsG0880042987.01.T01:CDS 45.0%
CATGCATGCCTTTGAGCAAA+TGG - Chr8:17135961-17135980 MsG0880042987.01.T01:five_prime_UTR 45.0%
CCATGGTGAATGTGCGATTA+GGG + Chr8:17131678-17131697 None:intergenic 45.0%
CGAAAATACACGAACTAGCC+TGG - Chr8:17135196-17135215 MsG0880042987.01.T01:CDS 45.0%
CGAATTTGCATTGAGGGGTT+GGG - Chr8:17133470-17133489 MsG0880042987.01.T01:CDS 45.0%
CGCCTTATGTTTCTCACATC+TGG - Chr8:17133981-17134000 MsG0880042987.01.T01:CDS 45.0%
GAAATCGTGATTCCCGATGA+TGG + Chr8:17132037-17132056 None:intergenic 45.0%
GAATTTGCATTGAGGGGTTG+GGG - Chr8:17133471-17133490 MsG0880042987.01.T01:CDS 45.0%
GAGTATCCAATGCTTAAGGC+AGG - Chr8:17133125-17133144 MsG0880042987.01.T01:CDS 45.0%
GATTATCTTCAGCGGACCAA+CGG + Chr8:17131915-17131934 None:intergenic 45.0%
GATTCCGAATGTGAGGTTGA+GGG - Chr8:17132752-17132771 MsG0880042987.01.T01:intron 45.0%
GATTGTCCCTGAGTTGCAAA+AGG - Chr8:17133091-17133110 MsG0880042987.01.T01:CDS 45.0%
GCAAGGAAACGAACCAAATC+AGG + Chr8:17133215-17133234 None:intergenic 45.0%
GCATCAAGCACTTCTGATCA+AGG - Chr8:17133908-17133927 MsG0880042987.01.T01:CDS 45.0%
GCCCAGATGTGAGAAACATA+AGG + Chr8:17133986-17134005 None:intergenic 45.0%
GGATTGTGATTCCGAATGTG+AGG - Chr8:17132745-17132764 MsG0880042987.01.T01:intron 45.0%
GGTTTAAGAGTTTCCGGTGA+TGG + Chr8:17132315-17132334 None:intergenic 45.0%
GTGATCTTGATACAAGGAGG+AGG - Chr8:17132838-17132857 MsG0880042987.01.T01:intron 45.0%
TAATTGCTGTAACCGCAAGC+TGG + Chr8:17132647-17132666 None:intergenic 45.0%
TCCATGGTGAATGTGCGATT+AGG + Chr8:17131679-17131698 None:intergenic 45.0%
TCCCGGGGATCATTAATATC+TGG + Chr8:17134445-17134464 None:intergenic 45.0%
TCCTTCCAGCACTGTAAAGT+TGG + Chr8:17134405-17134424 None:intergenic 45.0%
TCGAATTTGCATTGAGGGGT+TGG - Chr8:17133469-17133488 MsG0880042987.01.T01:CDS 45.0%
TCTACAAAGAAGGCTGCAAC+CGG - Chr8:17133020-17133039 MsG0880042987.01.T01:intron 45.0%
TCTGCAATATCTGGCATGTC+AGG + Chr8:17134355-17134374 None:intergenic 45.0%
TGATTCCGAATGTGAGGTTG+AGG - Chr8:17132751-17132770 MsG0880042987.01.T01:intron 45.0%
TGCATGTAGATTGGTGGGAT+GGG + Chr8:17133728-17133747 None:intergenic 45.0%
TGCTCTTGTGGATGAGCTTA+GGG - Chr8:17132494-17132513 MsG0880042987.01.T01:intron 45.0%
TGGAGACTCACAAATGAGTC+TGG + Chr8:17134233-17134252 None:intergenic 45.0%
TGGGATTGAGCATTACTGTC+TGG - Chr8:17135665-17135684 MsG0880042987.01.T01:CDS 45.0%
TTCGTCCAACTTTACAGTGC+TGG - Chr8:17134397-17134416 MsG0880042987.01.T01:CDS 45.0%
TTCTCGGCAAGAACAAGACA+GGG - Chr8:17134318-17134337 MsG0880042987.01.T01:CDS 45.0%
TTCTGCATCCTGGGGTAAAA+TGG - Chr8:17134273-17134292 MsG0880042987.01.T01:CDS 45.0%
TTGCTCTTGTGGATGAGCTT+AGG - Chr8:17132493-17132512 MsG0880042987.01.T01:intron 45.0%
TTGTGAGTCTCCAGTACTTC+TGG - Chr8:17134240-17134259 MsG0880042987.01.T01:CDS 45.0%
TTTCTCGGCAAGAACAAGAC+AGG - Chr8:17134317-17134336 MsG0880042987.01.T01:CDS 45.0%
! ACATCTGCCTTTTGCAACTC+AGG + Chr8:17133101-17133120 None:intergenic 45.0%
! AGAGCATGAGAGGTACGATT+AGG + Chr8:17131972-17131991 None:intergenic 45.0%
! CATCTGCCTTTTGCAACTCA+GGG + Chr8:17133100-17133119 None:intergenic 45.0%
! CTTGCTGTGTGGACTTTGTT+AGG - Chr8:17132594-17132613 MsG0880042987.01.T01:intron 45.0%
! GAGCATGAGAGGTACGATTA+GGG + Chr8:17131971-17131990 None:intergenic 45.0%
! GCGCTTCTTTTCCAAGAATC+AGG + Chr8:17133773-17133792 None:intergenic 45.0%
! TCCAACTTTACAGTGCTGGA+AGG - Chr8:17134401-17134420 MsG0880042987.01.T01:CDS 45.0%
! TTAAGAGTTTCCGGTGATGG+TGG + Chr8:17132312-17132331 None:intergenic 45.0%
! TTCAGACTCTGGGAGCTTAA+AGG + Chr8:17133381-17133400 None:intergenic 45.0%
! TTTGGTTCGTTTCCTTGCTG+CGG - Chr8:17133217-17133236 MsG0880042987.01.T01:CDS 45.0%
!! ATAGTTTGTTTGCGGCCGAT+GGG - Chr8:17132700-17132719 MsG0880042987.01.T01:intron 45.0%
!! ATCGTTGACCCTTTTAGCTG+TGG - Chr8:17134793-17134812 MsG0880042987.01.T01:CDS 45.0%
!! TCGTTGACCCTTTTAGCTGT+GGG - Chr8:17134794-17134813 MsG0880042987.01.T01:CDS 45.0%
!!! GTGGTTTTTGAAGTTGACGG+CGG + Chr8:17131884-17131903 None:intergenic 45.0%
!!! TGGTTGAAGGTGGGGTTTTT+TGG + Chr8:17133524-17133543 None:intergenic 45.0%
!!! TTGCCGGTGTCGTGATTTTA+TGG - Chr8:17135795-17135814 MsG0880042987.01.T01:CDS 45.0%
AACAAGTTCCGGAAGAAGCG+AGG + Chr8:17132073-17132092 None:intergenic 50.0%
AAGAAGCGAGGGCCATGATT+TGG + Chr8:17132061-17132080 None:intergenic 50.0%
AAGGGGATTGCTACGCGTTA+TGG - Chr8:17132879-17132898 MsG0880042987.01.T01:intron 50.0%
ACAAGTTCCGGAAGAAGCGA+GGG + Chr8:17132072-17132091 None:intergenic 50.0%
ACTCCAGGCCTTCCTTCAAA+AGG - Chr8:17133817-17133836 MsG0880042987.01.T01:CDS 50.0%
AGAACAAGACAGGGTTGAGG+AGG - Chr8:17134327-17134346 MsG0880042987.01.T01:CDS 50.0%
AGAAGCGAGGGCCATGATTT+GGG + Chr8:17132060-17132079 None:intergenic 50.0%
AGCAACGCTGTCTGATTCAC+AGG + Chr8:17134547-17134566 None:intergenic 50.0%
AGGCATGCATGCTCAACAAG+CGG + Chr8:17135952-17135971 None:intergenic 50.0%
AGGGAACTGTGCACAAAGCT+GGG + Chr8:17134488-17134507 None:intergenic 50.0%
AGTGCACCTGCCTTAAGCAT+TGG + Chr8:17133134-17133153 None:intergenic 50.0%
ATGTAGATTGGTGGGATGGG+TGG + Chr8:17133725-17133744 None:intergenic 50.0%
CAACATTTGACTCCGCAGCA+AGG + Chr8:17133232-17133251 None:intergenic 50.0%
CAGAGAAACAACTGTGCAGC+CGG + Chr8:17135311-17135330 None:intergenic 50.0%
CCCTAATCGCACATTCACCA+TGG - Chr8:17131675-17131694 MsG0880042987.01.T01:three_prime_UTR 50.0%
CCGCCATAAAATCACGACAC+CGG + Chr8:17135801-17135820 None:intergenic 50.0%
CTCCTTTAATGCAAACCCGG+TGG - Chr8:17132950-17132969 MsG0880042987.01.T01:intron 50.0%
CTGCATGTAGATTGGTGGGA+TGG + Chr8:17133729-17133748 None:intergenic 50.0%
CTTTGGTCAGTCTATCCCCT+TGG + Chr8:17133859-17133878 None:intergenic 50.0%
GCAAGAACAAGACAGGGTTG+AGG - Chr8:17134324-17134343 MsG0880042987.01.T01:CDS 50.0%
GCACCAAATGAGATCAGCCA+AGG - Chr8:17133839-17133858 MsG0880042987.01.T01:CDS 50.0%
GTATACTCGACAGTAGGCAG+AGG + Chr8:17135728-17135747 None:intergenic 50.0%
TATCTGGAAGGGGGTCTTCT+TGG + Chr8:17134429-17134448 None:intergenic 50.0%
TCCCCTTGGCTGATCTCATT+TGG + Chr8:17133845-17133864 None:intergenic 50.0%
TCCTCCCTCAACCTCACATT+CGG + Chr8:17132759-17132778 None:intergenic 50.0%
TGCAGGAAATTGGGGAAAGG+GGG + Chr8:17135926-17135945 None:intergenic 50.0%
TGCATCCTGGGGTAAAATGG+TGG - Chr8:17134276-17134295 MsG0880042987.01.T01:CDS 50.0%
TGCTCAACAAGCGGAAATGC+AGG + Chr8:17135943-17135962 None:intergenic 50.0%
TTAGAGAGCTCCAGAGAAGG+CGG - Chr8:17134014-17134033 MsG0880042987.01.T01:CDS 50.0%
TTGTCCTTCCAATTCGCCAC+CGG + Chr8:17132969-17132988 None:intergenic 50.0%
! ACTGTCCACCATTTTACCCC+AGG + Chr8:17134284-17134303 None:intergenic 50.0%
! AGCTTTGTGCACAGTTCCCT+GGG - Chr8:17134488-17134507 MsG0880042987.01.T01:CDS 50.0%
! GTGATTCCCGATGATGGCTA+GGG + Chr8:17132031-17132050 None:intergenic 50.0%
! TGCTGATGGTCTTGCTCTTG+TGG - Chr8:17132482-17132501 MsG0880042987.01.T01:intron 50.0%
! TTGACGGATCTGATCGGAGA+TGG + Chr8:17131857-17131876 None:intergenic 50.0%
!! CATAGTTTGTTTGCGGCCGA+TGG - Chr8:17132699-17132718 MsG0880042987.01.T01:intron 50.0%
!! GAGAGTGTGGAGGAAGCATT+CGG + Chr8:17131731-17131750 None:intergenic 50.0%
!! GGAAGCATTCGGAGAGGAAT+TGG + Chr8:17131720-17131739 None:intergenic 50.0%
!! GTGCGATTTTGACCCAGTTC+TGG - Chr8:17134146-17134165 MsG0880042987.01.T01:CDS 50.0%
!!! CCGGTGTCGTGATTTTATGG+CGG - Chr8:17135798-17135817 MsG0880042987.01.T01:CDS 50.0%
!!! GTTTTTGAAGTTGACGGCGG+CGG + Chr8:17131881-17131900 None:intergenic 50.0%
AAAACCACCTCCGTCTCCGT+TGG - Chr8:17131896-17131915 MsG0880042987.01.T01:three_prime_UTR 55.0%
AAACCCGGTGGCGAATTGGA+AGG - Chr8:17132962-17132981 MsG0880042987.01.T01:intron 55.0%
ACGGATCTGATCGGAGATGG+AGG + Chr8:17131854-17131873 None:intergenic 55.0%
AGAAGCCCGCTTCACAAGAC+CGG + Chr8:17133567-17133586 None:intergenic 55.0%
AGAGAGAGGATTCGGCATGG+CGG + Chr8:17131774-17131793 None:intergenic 55.0%
AGGAGAGAGAGGATTCGGCA+TGG + Chr8:17131777-17131796 None:intergenic 55.0%
ATCATGGCCCTCGCTTCTTC+CGG - Chr8:17132062-17132081 MsG0880042987.01.T01:intron 55.0%
ATCCTGCAGCTTCTGCATCC+TGG - Chr8:17134263-17134282 MsG0880042987.01.T01:CDS 55.0%
ATGACTTGAGGGAACCTCCC+AGG + Chr8:17134508-17134527 None:intergenic 55.0%
ATGCAAACCCGGTGGCGAAT+TGG - Chr8:17132958-17132977 MsG0880042987.01.T01:intron 55.0%
CAGGGAACTGTGCACAAAGC+TGG + Chr8:17134489-17134508 None:intergenic 55.0%
CGCCACCGGGTTTGCATTAA+AGG + Chr8:17132955-17132974 None:intergenic 55.0%
CGGATCTGATCGGAGATGGA+GGG + Chr8:17131853-17131872 None:intergenic 55.0%
CTCAGGATCTGTGCTGGGAT+GGG - Chr8:17135646-17135665 MsG0880042987.01.T01:CDS 55.0%
GAAGCGAGGGCCATGATTTG+GGG + Chr8:17132059-17132078 None:intergenic 55.0%
GAGGTTGAGGGAGGATGATG+AGG - Chr8:17132764-17132783 MsG0880042987.01.T01:intron 55.0%
GCTTTACTGTCCGCCTTCTC+TGG + Chr8:17134027-17134046 None:intergenic 55.0%
GGTGGCGAATTGGAAGGACA+AGG - Chr8:17132968-17132987 MsG0880042987.01.T01:intron 55.0%
TAGTAAAGGACGAGGGTGGC+AGG - Chr8:17133291-17133310 MsG0880042987.01.T01:CDS 55.0%
TCAGCACTCCCCTCAAGAGA+AGG + Chr8:17132468-17132487 None:intergenic 55.0%
TCCGAAGCCCTAGCCATCAT+CGG - Chr8:17132021-17132040 MsG0880042987.01.T01:intron 55.0%
TCCGAATGTGAGGTTGAGGG+AGG - Chr8:17132755-17132774 MsG0880042987.01.T01:intron 55.0%
TCCTGCAGCTTCTGCATCCT+GGG - Chr8:17134264-17134283 MsG0880042987.01.T01:CDS 55.0%
TCTCAGGATCTGTGCTGGGA+TGG - Chr8:17135645-17135664 MsG0880042987.01.T01:CDS 55.0%
TGACTTGAGGGAACCTCCCA+GGG + Chr8:17134507-17134526 None:intergenic 55.0%
TGTCCTTCCAATTCGCCACC+GGG + Chr8:17132968-17132987 None:intergenic 55.0%
TGTGGATGAGCTTAGGGCTG+CGG - Chr8:17132500-17132519 MsG0880042987.01.T01:intron 55.0%
TTTGTGCACAGTTCCCTGGG+AGG - Chr8:17134491-17134510 MsG0880042987.01.T01:CDS 55.0%
! AGTAGCCGGTCTTGTGAAGC+GGG - Chr8:17133559-17133578 MsG0880042987.01.T01:CDS 55.0%
! CAGCTTTGTGCACAGTTCCC+TGG - Chr8:17134487-17134506 MsG0880042987.01.T01:CDS 55.0%
! CAGTAGCCGGTCTTGTGAAG+CGG - Chr8:17133558-17133577 MsG0880042987.01.T01:CDS 55.0%
! CGTGATTCCCGATGATGGCT+AGG + Chr8:17132032-17132051 None:intergenic 55.0%
! GACTAGTCGTGACCAGCTTG+CGG - Chr8:17132632-17132651 MsG0880042987.01.T01:intron 55.0%
! GCTGCAGGATCCAGAAGTAC+TGG + Chr8:17134253-17134272 None:intergenic 55.0%
! TGTGAAGCGGGCTTCTGAGA+GGG - Chr8:17133571-17133590 MsG0880042987.01.T01:CDS 55.0%
! TTGTGAAGCGGGCTTCTGAG+AGG - Chr8:17133570-17133589 MsG0880042987.01.T01:CDS 55.0%
!! AGAGTTTCCGGTGATGGTGG+CGG + Chr8:17132309-17132328 None:intergenic 55.0%
!! GAAGTTAGGTTGGGAGGAGG+CGG + Chr8:17131800-17131819 None:intergenic 55.0%
!! GTGCCTTTTGAAGGAAGGCC+TGG + Chr8:17133823-17133842 None:intergenic 55.0%
!! TCTCTTGAGGGGAGTGCTGA+TGG - Chr8:17132468-17132487 MsG0880042987.01.T01:intron 55.0%
!! TGTGGAGGAAGCATTCGGAG+AGG + Chr8:17131726-17131745 None:intergenic 55.0%
AGGCCTGGAGTAGACGCACA+AGG + Chr8:17133808-17133827 None:intergenic 60.0%
CAGGGAGAGGAGAGAGAGTG+TGG + Chr8:17131744-17131763 None:intergenic 60.0%
CCGAAGCCCTAGCCATCATC+GGG - Chr8:17132022-17132041 MsG0880042987.01.T01:intron 60.0%
CCTGCAGCTTCTGCATCCTG+GGG - Chr8:17134265-17134284 MsG0880042987.01.T01:CDS 60.0%
CGCAGCGTCAATCAACGACG+CGG + Chr8:17132274-17132293 None:intergenic 60.0%
CTTCAGCGGACCAACGGAGA+CGG + Chr8:17131909-17131928 None:intergenic 60.0%
GAGGGTGGCAGGCTACGTTA+TGG - Chr8:17133302-17133321 MsG0880042987.01.T01:CDS 60.0%
GGCCTGGAGTAGACGCACAA+GGG + Chr8:17133807-17133826 None:intergenic 60.0%
GGCGAGGGCGAAGTTAGGTT+GGG + Chr8:17131809-17131828 None:intergenic 60.0%
GGCGGAGGAGAGAGAGGATT+CGG + Chr8:17131782-17131801 None:intergenic 60.0%
GGGCTTCGGAGAGCTGAGAT+TGG + Chr8:17132011-17132030 None:intergenic 60.0%
TGCCCTTGTGCGTCTACTCC+AGG - Chr8:17133802-17133821 MsG0880042987.01.T01:CDS 60.0%
TGGAGGGTTCAGCGACGAGA+CGG + Chr8:17131837-17131856 None:intergenic 60.0%
TGGAGTAGACGCACAAGGGC+AGG + Chr8:17133803-17133822 None:intergenic 60.0%
TTCAGCGACGAGACGGAGGA+CGG + Chr8:17131830-17131849 None:intergenic 60.0%
! CCCGATGATGGCTAGGGCTT+CGG + Chr8:17132025-17132044 None:intergenic 60.0%
! CGCGTCGTTGATTGACGCTG+CGG - Chr8:17132272-17132291 MsG0880042987.01.T01:intron 60.0%
! GGAGAGGAGAGAGAGTGTGG+AGG + Chr8:17131741-17131760 None:intergenic 60.0%
! GGCGGCTTGACGGATCTGAT+CGG + Chr8:17131863-17131882 None:intergenic 60.0%
!! GAGGGCGAAGTTAGGTTGGG+AGG + Chr8:17131806-17131825 None:intergenic 60.0%
!! GGCGAAGTTAGGTTGGGAGG+AGG + Chr8:17131803-17131822 None:intergenic 60.0%
!! TTGGTGGCGGAGAGCATGAG+AGG + Chr8:17131982-17132001 None:intergenic 60.0%
ACAGCAGCCGCCACCATCAC+CGG - Chr8:17132299-17132318 MsG0880042987.01.T01:intron 65.0%
AGAGGATTCGGCATGGCGGC+GGG + Chr8:17131770-17131789 None:intergenic 65.0%
AGGACGGCGAGGGCGAAGTT+AGG + Chr8:17131814-17131833 None:intergenic 65.0%
AGGGTTCAGCGACGAGACGG+AGG + Chr8:17131834-17131853 None:intergenic 65.0%
AGTTGACGGCGGCGGCTTGA+CGG + Chr8:17131873-17131892 None:intergenic 65.0%
CCCCAGGATGCAGAAGCTGC+AGG + Chr8:17134268-17134287 None:intergenic 65.0%
CGGCGAGGGCGAAGTTAGGT+TGG + Chr8:17131810-17131829 None:intergenic 65.0%
GAGAGGATTCGGCATGGCGG+CGG + Chr8:17131771-17131790 None:intergenic 65.0%
!! GTTAGGTTGGGAGGAGGCGG+AGG + Chr8:17131797-17131816 None:intergenic 65.0%
CAGCGGACCAACGGAGACGG+AGG + Chr8:17131906-17131925 None:intergenic 70.0%
CGGACCAACGGAGACGGAGG+TGG + Chr8:17131903-17131922 None:intergenic 70.0%
GACGAGACGGAGGACGGCGA+GGG + Chr8:17131824-17131843 None:intergenic 70.0%
GAGGATTCGGCATGGCGGCG+GGG + Chr8:17131769-17131788 None:intergenic 70.0%
GGAGGAGGCGGAGGAGAGAG+AGG + Chr8:17131788-17131807 None:intergenic 70.0%
CGACGAGACGGAGGACGGCG+AGG + Chr8:17131825-17131844 None:intergenic 75.0%
CGGCATGGCGGCGGGGTTCA+GGG + Chr8:17131762-17131781 None:intergenic 75.0%
TCGGCATGGCGGCGGGGTTC+AGG + Chr8:17131763-17131782 None:intergenic 75.0%
TGGCGGCGGGGTTCAGGGAG+AGG + Chr8:17131757-17131776 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 17131592 17136045 17131592 ID=MsG0880042987.01;Name=MsG0880042987.01
Chr8 mRNA 17131592 17136045 17131592 ID=MsG0880042987.01.T01;Parent=MsG0880042987.01;Name=MsG0880042987.01.T01;_AED=0.47;_eAED=0.47;_QI=102|1|1|1|0|0.5|2|395|969
Chr8 exon 17131592 17131986 17131592 ID=MsG0880042987.01.T01:exon:4524;Parent=MsG0880042987.01.T01
Chr8 exon 17133034 17136045 17133034 ID=MsG0880042987.01.T01:exon:4523;Parent=MsG0880042987.01.T01
Chr8 five_prime_UTR 17135944 17136045 17135944 ID=MsG0880042987.01.T01:five_prime_utr;Parent=MsG0880042987.01.T01
Chr8 CDS 17133034 17135943 17133034 ID=MsG0880042987.01.T01:cds;Parent=MsG0880042987.01.T01
Chr8 three_prime_UTR 17131592 17131986 17131592 ID=MsG0880042987.01.T01:three_prime_utr;Parent=MsG0880042987.01.T01
Gene Sequence

>MsG0880042987.01.T01

ATGGAATGGAACCAACAAACTCTCCAATTCCTCTCCGAATGCTTCCTCCACACTCTCTCTCCTCTCCCTGAACCCCGCCGCCATGCCGAATCCTCTCTCTCCTCCGCCTCCTCCCAACCTAACTTCGCCCTCGCCGTCCTCCGTCTCGTCGCTGAACCCTCCATCTCCGATCAGATCCGTCAAGCCGCCGCCGTCAACTTCAAAAACCACCTCCGTCTCCGTTGGTCCGCTGAAGATAATCCAATCCTCGATTCTGAAAAGGAACAAATCAAAACCCTAATCGTACCTCTCATGCTCTCCGCCACCAACAAAATCCAATCTCAGCTCTCCGAAGCCCTAGCCATCATCGGGAATCACGATTTCCCCAAATCATGGCCCTCGCTTCTTCCGGAACTTGTTGCTAGTCTTCAAAAAGGTTCTCAGAGTTCCGATTACGCTTCAATCAATGGTATTCTCAGTACCGCGAATTCGATTTTTAAGAAATTTCGTTTTCAGTATAAAACTAATGATTTATTGCTTGATTTGAAGTATTGTTTGGATAATTTTGCTGCTCCTTTGCTTGAGATTTTTCTCAAAACCGCGTCGTTGATTGACGCTGCGGCTGCACAGCAGCCGCCACCATCACCGGAAACTCTTAAACCGCTTTTCGAGTCACAGAAATTGTGTTGTAGGATATTTTTTTCACTGAATTTTCAAGAGTTGCCTGAGTTTTTTGAGGATCATATGAATGAATGGATGGGTGAGTTTAGGAAATATTTGACTACTAGTTATCCTTCTCTTGAGGGGAGTGCTGATGGTCTTGCTCTTGTGGATGAGCTTAGGGCTGCGGTTTGTGAGAATATTAATCTTTATATGGAGAAGAATGAGGAGGAGTTTAAGGTTTTTTTGAATGATTTTGCACTTGCTGTGTGGACTTTGTTAGGGAATGTGTCGCAGTCGACTAGTCGTGACCAGCTTGCGGTTACAGCAATTAAGTTTTTGACGACGGTTAGTACAAGTGTTCATCATAGTTTGTTTGCGGCCGATGGGATTATACCGCAGATTTGTCAGGGGATTGTGATTCCGAATGTGAGGTTGAGGGAGGATGATGAGGAGTTGTTTGAGATGAATCATATTGAGTATATTAGGAGGGATATGGAAGGTAGTGATCTTGATACAAGGAGGAGGATTGCTTGTGAGTTGCTTAAGGGGATTGCTACGCGTTATGGAGATGCTGTTAGAAGCATTGTTTCTGCGCAAGTACAGAGTTTGTTAAGCTCCTTTAATGCAAACCCGGTGGCGAATTGGAAGGACAAGGATTGTGCGATATATTTGGTGGTCTCTCTTTCTACAAAGAAGGCTGCAACCGGTTATGTCTCCACAGATCTTGTTGATGTTCAAAGCTTTTTTGAATCTGTGATTGTCCCTGAGTTGCAAAAGGCAGATGTGAATGAGTATCCAATGCTTAAGGCAGGTGCACTCAAGTTCTTTACTATGTTCCGATCTCAAATATCAAAAGAAGTAGCATTGAGGTTTTTACCTGATTTGGTTCGTTTCCTTGCTGCGGAGTCAAATGTTGTTCATTCTTATGCTGCTAGCTGTATTGAGAAACTCTTAATAGTAAAGGACGAGGGTGGCAGGCTACGTTATGGTTCAGCAGATATCGCTCCAGTTTTCTCAATGCTGATGAACAATCTTTTCAGTGCCTTTAAGCTCCCAGAGTCTGAAGAGAATCAGTATGTTATGAAATGTATTATGAGGGTTCTTGGTGTTGCAGATATACAACTTGATGTTGCTCGAATTTGCATTGAGGGGTTGGGGTCAATTCTTTCTGAAGTTTGCAGAAATCCAAAAAACCCCACCTTCAACCATTATCTGTTTGAGTCAGTAGCCGGTCTTGTGAAGCGGGCTTCTGAGAGGGACCCAACTCTTGTGTCTGTTTTTGAAACAAGCCTTTTCCCTCGGCTTGAAATAATACTGTCCAATGATGTAACTGAATTTTTCCCATACGCATTTCAGTTACTTGCTCTGCTTGTTGAGTTAAACAGACCACCCATCCCACCAATCTACATGCAGATATTTGAGATTCTTTTGTCACCTGATTCTTGGAAAAGAAGCGCAAGCGTTCCTGCCCTTGTGCGTCTACTCCAGGCCTTCCTTCAAAAGGCACCAAATGAGATCAGCCAAGGGGATAGACTGACCAAAGTACTTGGCATATTTGACACGCTAATACAAGCATCAAGCACTTCTGATCAAGGATTTTACGTGCTTAACACAGTCATTGAAAGTCTTCAGTATGATGTTCTTACGCCTTATGTTTCTCACATCTGGGCTGCTATTTTTAGAGAGCTCCAGAGAAGGCGGACAGTAAAGCTCCTCAAGTCTCTCTTGATATTCAGTTCACTGTTTCTGGTTAAGCATGGTTCTGCAAATCTAGTTAATACTATGAATGCCGTCCAGCCTGATATATTTAGTGCGATTTTGACCCAGTTCTGGATTCCGAATCTTAAGCTGATTACTGGAACTATAGAGCTCAAACTGACTGCAGTTGCTTCAACCAGACTCATTTGTGAGTCTCCAGTACTTCTGGATCCTGCAGCTTCTGCATCCTGGGGTAAAATGGTGGACAGTATTGTGACACTTCTTTCTCGGCAAGAACAAGACAGGGTTGAGGAGGAGCCTGACATGCCAGATATTGCAGAAAATGTAGGTTATACTGCCACCTTCGTCCAACTTTACAGTGCTGGAAGGAACCAAGAAGACCCCCTTCCAGATATTAATGATCCCCGGGAATTTTTTGTTTCTTCATTGGCCCAGCTTTGTGCACAGTTCCCTGGGAGGTTCCCTCAAGTCATCACTGCAAATGTTGATCCTGTGAATCAGACAGCGTTGCTTCAACTTTGCACCACTTACAACCGAGCATTAGTTTGA

Protein sequence

>MsG0880042987.01.T01

MEWNQQTLQFLSECFLHTLSPLPEPRRHAESSLSSASSQPNFALAVLRLVAEPSISDQIRQAAAVNFKNHLRLRWSAEDNPILDSEKEQIKTLIVPLMLSATNKIQSQLSEALAIIGNHDFPKSWPSLLPELVASLQKGSQSSDYASINGILSTANSIFKKFRFQYKTNDLLLDLKYCLDNFAAPLLEIFLKTASLIDAAAAQQPPPSPETLKPLFESQKLCCRIFFSLNFQELPEFFEDHMNEWMGEFRKYLTTSYPSLEGSADGLALVDELRAAVCENINLYMEKNEEEFKVFLNDFALAVWTLLGNVSQSTSRDQLAVTAIKFLTTVSTSVHHSLFAADGIIPQICQGIVIPNVRLREDDEELFEMNHIEYIRRDMEGSDLDTRRRIACELLKGIATRYGDAVRSIVSAQVQSLLSSFNANPVANWKDKDCAIYLVVSLSTKKAATGYVSTDLVDVQSFFESVIVPELQKADVNEYPMLKAGALKFFTMFRSQISKEVALRFLPDLVRFLAAESNVVHSYAASCIEKLLIVKDEGGRLRYGSADIAPVFSMLMNNLFSAFKLPESEENQYVMKCIMRVLGVADIQLDVARICIEGLGSILSEVCRNPKNPTFNHYLFESVAGLVKRASERDPTLVSVFETSLFPRLEIILSNDVTEFFPYAFQLLALLVELNRPPIPPIYMQIFEILLSPDSWKRSASVPALVRLLQAFLQKAPNEISQGDRLTKVLGIFDTLIQASSTSDQGFYVLNTVIESLQYDVLTPYVSHIWAAIFRELQRRRTVKLLKSLLIFSSLFLVKHGSANLVNTMNAVQPDIFSAILTQFWIPNLKLITGTIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRQEQDRVEEEPDMPDIAENVGYTATFVQLYSAGRNQEDPLPDINDPREFFVSSLAQLCAQFPGRFPQVITANVDPVNQTALLQLCTTYNRALV*