AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036022.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036022.01.T01 MTR_7g407040 84.595 370 32 4 1 345 1 370 0.0 558
MsG0780036022.01.T01 MTR_1g111090 59.649 399 104 8 1 345 1 396 3.57e-146 418
MsG0780036022.01.T01 MTR_2g105410 52.022 371 147 7 1 345 1 366 2.07e-113 334
MsG0780036022.01.T01 MTR_7g006500 56.098 82 33 2 119 199 61 140 8.80e-18 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036022.01.T01 AT5G38470 61.579 380 108 9 1 345 1 377 2.78e-143 410
MsG0780036022.01.T01 AT3G02540 56.429 420 107 11 1 345 1 419 3.89e-142 409
MsG0780036022.01.T01 AT3G02540 56.770 421 103 13 1 345 1 418 5.81e-142 409
MsG0780036022.01.T01 AT1G79650 51.451 379 136 9 1 345 1 365 9.09e-117 342
MsG0780036022.01.T01 AT1G79650 51.316 380 141 9 1 345 1 371 3.79e-116 341
MsG0780036022.01.T01 AT1G16190 50.674 371 154 8 1 345 1 368 4.79e-113 333
MsG0780036022.01.T01 AT1G79650 48.379 401 145 8 1 345 1 395 2.38e-112 332
MsG0780036022.01.T01 AT5G38470 58.514 323 99 9 1 289 1 322 3.63e-105 311
MsG0780036022.01.T01 AT1G16190 50.000 346 144 8 26 345 3 345 6.13e-101 301
MsG0780036022.01.T01 AT1G79650 46.842 380 138 10 1 345 1 351 8.41e-98 293
MsG0780036022.01.T01 AT3G02540 48.667 300 84 8 1 231 1 299 1.76e-74 232
MsG0780036022.01.T01 AT5G16090 45.833 96 52 0 244 339 74 169 2.03e-18 82.0
MsG0780036022.01.T01 AT5G16090 52.632 76 35 1 1 75 1 76 5.96e-18 80.9

Find 109 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATGGCCTCGTTCTCTTC+TGG 0.133988 7:+1443031 None:intergenic
ACTAATCATCAAACTCATTT+TGG 0.167094 7:+1442588 None:intergenic
TAATCAGGGCATTCCCAATT+TGG 0.173680 7:-1443811 MsG0780036022.01.T01:intron
TGCTGGAGCTTCAGCTTGTT+CGG 0.253567 7:+1444029 None:intergenic
TTCTTTGCAGCCCATGCTTC+AGG 0.263564 7:-1443539 MsG0780036022.01.T01:intron
GAATGGCCTCGTTCTCTTCT+GGG 0.275717 7:+1443032 None:intergenic
TAGATATTCAACAGCTCTTT+CGG 0.288694 7:+1444580 None:intergenic
TGTTTGTGTCCTAAACTCTT+TGG 0.298373 7:-1442497 MsG0780036022.01.T01:three_prime_UTR
CACAGCAGGCACAGCTGGTT+GGG 0.302153 7:+1443951 None:intergenic
GCTGGAGCTTCAGCTTGTTC+GGG 0.312279 7:+1444030 None:intergenic
GAGGCAAGAACTTGCAGGTT+GGG 0.326037 7:+1445122 None:intergenic
AGAGGGACAGTTGGGTGCTT+TGG 0.326637 7:-1443077 MsG0780036022.01.T01:CDS
AGATATTCAACAGCTCTTTC+GGG 0.333255 7:+1444581 None:intergenic
TATCCAACAAATTCTAGAAA+TGG 0.339571 7:-1444663 MsG0780036022.01.T01:CDS
TGGATGAGTTCCATTAGGTT+TGG 0.345262 7:+1443499 None:intergenic
TCTAGAATTTGTTGGATAGT+TGG 0.348951 7:+1444668 None:intergenic
ATCCAACAAATTCTAGAAAT+GGG 0.348997 7:-1444662 MsG0780036022.01.T01:CDS
AATCAGGGCATTCCCAATTT+GGG 0.364424 7:-1443810 MsG0780036022.01.T01:intron
GCTCTTGGATGAGTTCCATT+AGG 0.373949 7:+1443494 None:intergenic
ATCACTTCTCCAAAGAGTTT+AGG 0.374572 7:+1442488 None:intergenic
AATAACTGTAAATAAATCTA+TGG 0.378769 7:+1442383 None:intergenic
GCAGGCACAGCTGGTTGGGC+TGG 0.378872 7:+1443955 None:intergenic
GCTGAATCTAATCTCATTGC+TGG 0.395901 7:-1444704 MsG0780036022.01.T01:CDS
CAGCCCATGCTTCAGGAACT+AGG 0.397520 7:-1443532 MsG0780036022.01.T01:CDS
TGTCGTGATCATGTTGTCTA+AGG 0.399055 7:-1446223 MsG0780036022.01.T01:intron
GCACCATTGTTCTCAAGGCT+TGG 0.405554 7:+1443652 None:intergenic
TGGGCTGGAGCCTGAGCTGA+AGG 0.406159 7:+1443970 None:intergenic
AAAACAAAATCCAAACCTAA+TGG 0.410836 7:-1443509 MsG0780036022.01.T01:CDS
GATTAACGTGAAGACTCTTA+AGG 0.418379 7:-1447389 MsG0780036022.01.T01:CDS
TGCTTGCACCATTGTTCTCA+AGG 0.420679 7:+1443647 None:intergenic
TCTGGCAGCCAACTACCTAT+TGG 0.424230 7:-1442615 MsG0780036022.01.T01:CDS
CAATTCTAATTTCTAGTCAA+TGG 0.433095 7:+1442418 None:intergenic
GAAACTTCACAGCAGAACTT+TGG 0.435391 7:+1447502 None:intergenic
ATGGTGATTTACAGATACTT+TGG 0.436103 7:+1442437 None:intergenic
AGAAGTCAGCTTGATGCTCT+TGG 0.439778 7:+1443479 None:intergenic
AGCAAACCCTCAAATCTTGC+AGG 0.441602 7:-1443628 MsG0780036022.01.T01:intron
TTCTTCCTGCCCAACATTGG+TGG 0.442898 7:+1443996 None:intergenic
ACTAGAAATTAGAATTGTGT+TGG 0.448282 7:-1442412 MsG0780036022.01.T01:three_prime_UTR
AGGCCCACAGCAGGCACAGC+TGG 0.448290 7:+1443946 None:intergenic
CCGTATCTTGAGCGTTCACT+TGG 0.457398 7:+1447350 None:intergenic
ATTAACGTGAAGACTCTTAA+GGG 0.458211 7:-1447388 MsG0780036022.01.T01:CDS
ATGATACCTGCAAGATTTGA+GGG 0.458359 7:+1443622 None:intergenic
CTAGAAATTAGAATTGTGTT+GGG 0.462802 7:-1442411 MsG0780036022.01.T01:three_prime_UTR
TTGGTGATCCAATAGGTAGT+TGG 0.464218 7:+1442607 None:intergenic
CACCGCGCACACGGTGGAGG+AGG 0.470373 7:+1447442 None:intergenic
TCAGCTTGGCCGTATGTGTC+AGG 0.471237 7:+1444722 None:intergenic
GATGATACCTGCAAGATTTG+AGG 0.473748 7:+1443621 None:intergenic
TTGGTGGATGCAGCAACTGC+TGG 0.482507 7:+1444012 None:intergenic
AGAGAACGAGGCCATTCAAC+GGG 0.484161 7:-1443026 MsG0780036022.01.T01:intron
TTTCCTAGTTCCTGAAGCAT+GGG 0.485024 7:+1443529 None:intergenic
TTGCTGCATCCACCAATGTT+GGG 0.488460 7:-1444005 MsG0780036022.01.T01:CDS
TAATCTTACTCTTCGCCTCC+AGG 0.493950 7:+1443439 None:intergenic
CCACAGCAGGCACAGCTGGT+TGG 0.493994 7:+1443950 None:intergenic
GGAAGAAAACCCTTCAGCTC+AGG 0.494609 7:-1443980 MsG0780036022.01.T01:CDS
GAAAAGCATTGTTGTGCAGC+AGG 0.507192 7:+1446309 None:intergenic
TTACGTCTTATAAATGAGCC+TGG 0.509014 7:-1443457 MsG0780036022.01.T01:CDS
TGCATCCACCAATGTTGGGC+AGG 0.512054 7:-1444001 MsG0780036022.01.T01:CDS
GGGCTGGAGCCTGAGCTGAA+GGG 0.512419 7:+1443971 None:intergenic
CCCCTCCTCCACCGTGTGCG+CGG 0.514081 7:-1447444 MsG0780036022.01.T01:five_prime_UTR
GTTGCTGCATCCACCAATGT+TGG 0.517414 7:-1444006 MsG0780036022.01.T01:CDS
GGAGGCAAGAACTTGCAGGT+TGG 0.520321 7:+1445121 None:intergenic
ATTTCTGCGAAACAGTCAAC+AGG 0.524257 7:-1443760 MsG0780036022.01.T01:intron
CACCACCGCGCACACGGTGG+AGG 0.525385 7:+1447439 None:intergenic
CTCTTCTGGGGTGATAGTAA+TGG 0.530516 7:+1443045 None:intergenic
TCACTAGCTTACCCGTTGAA+TGG 0.535651 7:+1443015 None:intergenic
AGGAACCTAGAGGGACAGTT+GGG 0.536808 7:-1443085 MsG0780036022.01.T01:CDS
TACTGTCCGACAGTTGATGC+AGG 0.540212 7:+1445077 None:intergenic
TTCATCAAGGAAAAGTGCTA+AGG 0.541095 7:-1446289 MsG0780036022.01.T01:CDS
CGACCGAGATCTTGTGTTGG+AGG 0.543876 7:-1442666 MsG0780036022.01.T01:CDS
AATGGCCTCGTTCTCTTCTG+GGG 0.544654 7:+1443033 None:intergenic
CCAAGTGAACGCTCAAGATA+CGG 0.549415 7:-1447350 MsG0780036022.01.T01:intron
AAATGAAAATGCAGGTGACT+TGG 0.550169 7:-1443784 MsG0780036022.01.T01:CDS
ACCGCGCACACGGTGGAGGA+GGG 0.551093 7:+1447443 None:intergenic
CAATGAGATTAGATTCAGCT+TGG 0.553063 7:+1444708 None:intergenic
CAGGAACCTAGAGGGACAGT+TGG 0.559902 7:-1443086 MsG0780036022.01.T01:CDS
TGCTAAGGATGAGACTACCT+TGG 0.565156 7:-1446274 MsG0780036022.01.T01:CDS
AAGCACCCAACTGTCCCTCT+AGG 0.566429 7:+1443080 None:intergenic
TCCAACAAATTCTAGAAATG+GGG 0.567601 7:-1444661 MsG0780036022.01.T01:CDS
TGGGGCAGCTGAAGCAGCAG+AGG 0.567681 7:+1445451 None:intergenic
TGAAATCACCACCGCGCACA+CGG 0.580811 7:+1447433 None:intergenic
TTTGGCAGCTTGAGGATATG+GGG 0.582461 7:-1442691 MsG0780036022.01.T01:intron
CAGAATAAGGTATCATCAAG+TGG 0.584643 7:-1445476 MsG0780036022.01.T01:CDS
CCGCGCACACGGTGGAGGAG+GGG 0.598059 7:+1447444 None:intergenic
TATATGCAGCACGAAGAGCT+CGG 0.599886 7:+1444609 None:intergenic
GACAGTTGATGCAGGAGCTG+AGG 0.600128 7:+1445085 None:intergenic
CCAACAAATTCTAGAAATGG+GGG 0.603400 7:-1444660 MsG0780036022.01.T01:CDS
CTGGAGCTTCAGCTTGTTCG+GGG 0.603945 7:+1444031 None:intergenic
GTGCGCGGTGGTGATTTCAT+CGG 0.613244 7:-1447429 MsG0780036022.01.T01:five_prime_UTR
GAATTGTATATTTCAGTGCG+TGG 0.614207 7:-1442357 MsG0780036022.01.T01:three_prime_UTR
ACACCTCCAACACAAGATCT+CGG 0.615119 7:+1442663 None:intergenic
AAGAGAACGAGGCCATTCAA+CGG 0.619236 7:-1443027 MsG0780036022.01.T01:CDS
TCAGCTCCTGCATCAACTGT+CGG 0.620986 7:-1445083 MsG0780036022.01.T01:CDS
GTTCGACCGAGATCTTGTGT+TGG 0.621206 7:-1442669 MsG0780036022.01.T01:CDS
GGAGCTGAGGTGTTTGACAA+GGG 0.624817 7:+1445098 None:intergenic
AAAAGCATTGTTGTGCAGCA+GGG 0.625358 7:+1446310 None:intergenic
AGGAGCTGAGGTGTTTGACA+AGG 0.625907 7:+1445097 None:intergenic
AGCTGAGGTGTTTGACAAGG+GGG 0.627791 7:+1445100 None:intergenic
CTCCTCCACCGTGTGCGCGG+TGG 0.629121 7:-1447441 MsG0780036022.01.T01:five_prime_UTR
TTGGGTGCAAATGAAAATGC+AGG 0.634420 7:-1443792 MsG0780036022.01.T01:CDS
GAGCTGAGGTGTTTGACAAG+GGG 0.635619 7:+1445099 None:intergenic
GTTCCAAGCCTTGAGAACAA+TGG 0.641500 7:-1443655 MsG0780036022.01.T01:CDS
TGTATGACCAGGAACCTAGA+GGG 0.644106 7:-1443094 MsG0780036022.01.T01:intron
AGTGTGGTGCCTGACACATA+CGG 0.655452 7:-1444731 MsG0780036022.01.T01:CDS
GGGGTGATAGTAATGGTCTG+AGG 0.673723 7:+1443052 None:intergenic
CAACAAATTCTAGAAATGGG+GGG 0.675087 7:-1444659 MsG0780036022.01.T01:CDS
TTGTATGACCAGGAACCTAG+AGG 0.704847 7:-1443095 MsG0780036022.01.T01:intron
AATCACCACCGCGCACACGG+TGG 0.708868 7:+1447436 None:intergenic
CGTCTTATAAATGAGCCTGG+AGG 0.725357 7:-1443454 MsG0780036022.01.T01:CDS
TATCACCCCAGAAGAGAACG+AGG 0.729383 7:-1443038 MsG0780036022.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATAAAATTTAAACAATAA+TGG - Chr7:1445992-1446011 MsG0780036022.01.T01:intron 10.0%
!!! TTTTTTGTTTTTTTTAATCA+GGG - Chr7:1446030-1446049 MsG0780036022.01.T01:intron 10.0%
!!! TTTTTTTGTTTTTTTTAATC+AGG - Chr7:1446029-1446048 MsG0780036022.01.T01:intron 10.0%
!! AAAGATAATACAATGAATAA+CGG - Chr7:1445549-1445568 MsG0780036022.01.T01:intron 15.0%
!! AAATAAACCATATATAATCT+AGG - Chr7:1446680-1446699 MsG0780036022.01.T01:intron 15.0%
!! AATAAACCATATATAATCTA+GGG - Chr7:1446681-1446700 MsG0780036022.01.T01:intron 15.0%
!! AATAACTGTAAATAAATCTA+TGG + Chr7:1447475-1447494 None:intergenic 15.0%
!! CATAAATAATGAAACTAATA+TGG + Chr7:1446154-1446173 None:intergenic 15.0%
!! TATGATATAGAAAAAATGAT+TGG + Chr7:1443970-1443989 None:intergenic 15.0%
!!! ATTGTATTATCTTTTAAGAT+CGG + Chr7:1445543-1445562 None:intergenic 15.0%
!!! ATTTGAATAACTATATCTTT+TGG + Chr7:1446525-1446544 None:intergenic 15.0%
!!! TTATTACTTTTTGTTGTTTT+CGG - Chr7:1447392-1447411 MsG0780036022.01.T01:CDS 15.0%
!! AAAATATGAACTATATGATG+TGG + Chr7:1445646-1445665 None:intergenic 20.0%
!! ACACACAAATTATTATATTC+AGG + Chr7:1445681-1445700 None:intergenic 20.0%
!! CATGTATAATTTAACTGATA+GGG - Chr7:1445798-1445817 MsG0780036022.01.T01:intron 20.0%
!! TCCACAAAAAATTGAATTAA+AGG + Chr7:1443798-1443817 None:intergenic 20.0%
!! TTGGTTGAAATAAATTGTTT+CGG - Chr7:1442630-1442649 MsG0780036022.01.T01:CDS 20.0%
!!! AAAATTCTAGATTTTAACAC+TGG - Chr7:1447291-1447310 MsG0780036022.01.T01:intron 20.0%
!!! AAGAGTAAGATTACTATTTT+AGG - Chr7:1446426-1446445 MsG0780036022.01.T01:intron 20.0%
!!! AAGATGGTTAGAAAATATTT+TGG - Chr7:1446704-1446723 MsG0780036022.01.T01:intron 20.0%
!!! AATTTTTGACAAAGATTGTA+AGG + Chr7:1444461-1444480 None:intergenic 20.0%
!!! ACCTTTAATTCAATTTTTTG+TGG - Chr7:1443794-1443813 MsG0780036022.01.T01:CDS 20.0%
!!! AGTATTTAAGTTAATTCAGT+TGG - Chr7:1443730-1443749 MsG0780036022.01.T01:intron 20.0%
!!! GATGATGTTATTTTAATGAT+TGG - Chr7:1443671-1443690 MsG0780036022.01.T01:intron 20.0%
!!! GTATTTAAGTTAATTCAGTT+GGG - Chr7:1443731-1443750 MsG0780036022.01.T01:intron 20.0%
!!! TATAGTTCATATTTTATCAC+AGG - Chr7:1445651-1445670 MsG0780036022.01.T01:intron 20.0%
!!! TATTACTTTTTGTTGTTTTC+GGG - Chr7:1447393-1447412 MsG0780036022.01.T01:CDS 20.0%
!!! TATTTAAGTTAATTCAGTTG+GGG - Chr7:1443732-1443751 MsG0780036022.01.T01:intron 20.0%
!!! TTATGGTTTTGTATTAAGAA+TGG - Chr7:1445715-1445734 MsG0780036022.01.T01:intron 20.0%
!!! TTGTTTAAATTTTATTGCAC+AGG + Chr7:1445989-1446008 None:intergenic 20.0%
!!! TTTGAATGTTAAGTTGTTTA+TGG - Chr7:1443140-1443159 MsG0780036022.01.T01:intron 20.0%
!!! TTTTTGATGTTTAAATGTGT+GGG - Chr7:1444152-1444171 MsG0780036022.01.T01:intron 20.0%
! AAATATGCAGTTACAAAAGT+GGG - Chr7:1444001-1444020 MsG0780036022.01.T01:CDS 25.0%
! AAGATAGTGAAATTTCACAA+TGG + Chr7:1444668-1444687 None:intergenic 25.0%
! AATATTTGAGTGTCAAACAA+TGG - Chr7:1445591-1445610 MsG0780036022.01.T01:intron 25.0%
! ACTAGAAATTAGAATTGTGT+TGG - Chr7:1447443-1447462 MsG0780036022.01.T01:five_prime_UTR 25.0%
! CCATGTATAATTTAACTGAT+AGG - Chr7:1445797-1445816 MsG0780036022.01.T01:intron 25.0%
! CCTAAATAATCATGCAAAAT+TGG + Chr7:1444621-1444640 None:intergenic 25.0%
! CCTATCAGTTAAATTATACA+TGG + Chr7:1445800-1445819 None:intergenic 25.0%
! CTAGAAATTAGAATTGTGTT+GGG - Chr7:1447444-1447463 MsG0780036022.01.T01:five_prime_UTR 25.0%
! CTTCAAATTTGAATCAATTC+TGG - Chr7:1443227-1443246 MsG0780036022.01.T01:intron 25.0%
! GACAAGAAAATTTGTACTTA+CGG + Chr7:1444430-1444449 None:intergenic 25.0%
! GATGTGAAGAAAAATATAGA+GGG - Chr7:1443501-1443520 MsG0780036022.01.T01:CDS 25.0%
! GTCCTAGAAAATTATAGTAA+TGG + Chr7:1446277-1446296 None:intergenic 25.0%
! GTTGTTGGTATAAAAAAAGT+TGG - Chr7:1442611-1442630 MsG0780036022.01.T01:CDS 25.0%
! TAATTATTGGGTTATGTTGT+TGG - Chr7:1442596-1442615 MsG0780036022.01.T01:CDS 25.0%
! TAGAAAAAATGATTGGATGT+TGG + Chr7:1443963-1443982 None:intergenic 25.0%
! TATCCTTTGTATTATAACCA+AGG + Chr7:1446659-1446678 None:intergenic 25.0%
! TCACAATTAAAACAGCTTAA+TGG + Chr7:1446875-1446894 None:intergenic 25.0%
! TTAAATTCATCTCACTTTCA+GGG - Chr7:1444863-1444882 MsG0780036022.01.T01:intron 25.0%
! TTATTACATTATTGTGCAAG+AGG + Chr7:1447126-1447145 None:intergenic 25.0%
! TTGTCGCTATTTATATATGT+AGG - Chr7:1444707-1444726 MsG0780036022.01.T01:CDS 25.0%
!! AACTATATCTTTTGGTGAAA+TGG + Chr7:1446517-1446536 None:intergenic 25.0%
!! AACTGCATATTTGAAATTGA+TGG + Chr7:1443993-1444012 None:intergenic 25.0%
!! AATGTTAAGTTGTTTATGGT+TGG - Chr7:1443144-1443163 MsG0780036022.01.T01:intron 25.0%
!! ACTAATCATCAAACTCATTT+TGG + Chr7:1447270-1447289 None:intergenic 25.0%
!! AGTTTAATTGTGTTTTCTAC+AGG - Chr7:1446119-1446138 MsG0780036022.01.T01:intron 25.0%
!! ATCCAACAAATTCTAGAAAT+GGG - Chr7:1445193-1445212 MsG0780036022.01.T01:intron 25.0%
!! CCAATTTTGCATGATTATTT+AGG - Chr7:1444618-1444637 MsG0780036022.01.T01:CDS 25.0%
!! CTCCATTACTATAATTTTCT+AGG - Chr7:1446272-1446291 MsG0780036022.01.T01:CDS 25.0%
!! GTTTTTGATGTTTAAATGTG+TGG - Chr7:1444151-1444170 MsG0780036022.01.T01:intron 25.0%
!! TATCCAACAAATTCTAGAAA+TGG - Chr7:1445192-1445211 MsG0780036022.01.T01:intron 25.0%
!! TATGTATGTTTGTTTCTTGA+TGG - Chr7:1443465-1443484 MsG0780036022.01.T01:CDS 25.0%
!! TGTGGATTTTTATTGGATAT+TGG - Chr7:1444039-1444058 MsG0780036022.01.T01:CDS 25.0%
!! TTCTATTGCTTCCTTTTAAT+GGG - Chr7:1444261-1444280 MsG0780036022.01.T01:intron 25.0%
!! TTTGTTTCTTGATGGATATT+AGG - Chr7:1443473-1443492 MsG0780036022.01.T01:CDS 25.0%
!!! AACCTTCCTTCATTATTTTT+TGG - Chr7:1444212-1444231 MsG0780036022.01.T01:intron 25.0%
!!! ACCTTCCTTCATTATTTTTT+GGG - Chr7:1444213-1444232 MsG0780036022.01.T01:intron 25.0%
!!! AGCTTTAATTTTCCATGTAA+TGG - Chr7:1443917-1443936 MsG0780036022.01.T01:intron 25.0%
!!! CAATTCTAATTTCTAGTCAA+TGG + Chr7:1447440-1447459 None:intergenic 25.0%
!!! GCTTTAATTTTCCATGTAAT+GGG - Chr7:1443918-1443937 MsG0780036022.01.T01:intron 25.0%
!!! GTAAGTTCAATTTGTTTCTA+TGG - Chr7:1444798-1444817 MsG0780036022.01.T01:intron 25.0%
!!! TTGAGAAGTTTAAGTTTTTG+TGG - Chr7:1443441-1443460 MsG0780036022.01.T01:intron 25.0%
AAACACAATAGACAAGACAA+AGG + Chr7:1444096-1444115 None:intergenic 30.0%
AAAGTTTAGAAGTGAACCAA+TGG + Chr7:1444340-1444359 None:intergenic 30.0%
AAGAAAATTTGTACTTACGG+TGG + Chr7:1444427-1444446 None:intergenic 30.0%
AATAAGACACTATCTACACA+AGG + Chr7:1444998-1445017 None:intergenic 30.0%
AATACAATGAATAACGGTGA+AGG - Chr7:1445555-1445574 MsG0780036022.01.T01:intron 30.0%
AATATGCAGTTACAAAAGTG+GGG - Chr7:1444002-1444021 MsG0780036022.01.T01:CDS 30.0%
AATTCTTCATGCAATTTCTC+AGG - Chr7:1447046-1447065 MsG0780036022.01.T01:intron 30.0%
ACATAAATATGCATCAGTTG+TGG - Chr7:1444969-1444988 MsG0780036022.01.T01:intron 30.0%
ACCCAAAAAATAATGAAGGA+AGG + Chr7:1444217-1444236 None:intergenic 30.0%
AGAAAATTTGTACTTACGGT+GGG + Chr7:1444426-1444445 None:intergenic 30.0%
AGGAAGGTTAAAAGACATAA+AGG + Chr7:1444201-1444220 None:intergenic 30.0%
AGTTGTAATATTCTGTCCAT+TGG - Chr7:1444321-1444340 MsG0780036022.01.T01:intron 30.0%
ATAAGACACTATCTACACAA+GGG + Chr7:1444997-1445016 None:intergenic 30.0%
ATGATACCTTATTCTGCAAA+GGG + Chr7:1444375-1444394 None:intergenic 30.0%
ATGCCTAAGAATAAGAGAAT+AGG + Chr7:1445031-1445050 None:intergenic 30.0%
ATGGTGATTTACAGATACTT+TGG + Chr7:1447421-1447440 None:intergenic 30.0%
ATTAACGTGAAGACTCTTAA+GGG - Chr7:1442467-1442486 MsG0780036022.01.T01:three_prime_UTR 30.0%
CAAAATTGGATATTGTGAAG+AGG + Chr7:1444607-1444626 None:intergenic 30.0%
CAAATATGCAGTTACAAAAG+TGG - Chr7:1444000-1444019 MsG0780036022.01.T01:CDS 30.0%
CAAATTTGAATCAATTCTGG+AGG - Chr7:1443230-1443249 MsG0780036022.01.T01:intron 30.0%
CATATATAATCTAGGGAAGA+TGG - Chr7:1446688-1446707 MsG0780036022.01.T01:intron 30.0%
CATCTTCCCTAGATTATATA+TGG + Chr7:1446690-1446709 None:intergenic 30.0%
CATTGAATGTCAATGGATAA+TGG + Chr7:1443892-1443911 None:intergenic 30.0%
CGATGTGAAGAAAAATATAG+AGG - Chr7:1443500-1443519 MsG0780036022.01.T01:CDS 30.0%
GAGCAAACAAATGTCTTAAT+AGG + Chr7:1446730-1446749 None:intergenic 30.0%
GCAAATCATTAAAACTGTAC+TGG + Chr7:1445506-1445525 None:intergenic 30.0%
GTCAGTTCTTTAAACTAAAC+TGG + Chr7:1442841-1442860 None:intergenic 30.0%
GTTAAATTCATCTCACTTTC+AGG - Chr7:1444862-1444881 MsG0780036022.01.T01:intron 30.0%
GTTCTTTAAACTAAACTGGA+AGG + Chr7:1442837-1442856 None:intergenic 30.0%
TAAATTCATCTCACTTTCAG+GGG - Chr7:1444864-1444883 MsG0780036022.01.T01:intron 30.0%
TAGATATTCAACAGCTCTTT+CGG + Chr7:1445278-1445297 None:intergenic 30.0%
TAGCACCCAAAAAATAATGA+AGG + Chr7:1444221-1444240 None:intergenic 30.0%
TGGACAGAATATTACAACTT+AGG + Chr7:1444320-1444339 None:intergenic 30.0%
TTGAATGTAGTTACATGTGT+CGG - Chr7:1442729-1442748 MsG0780036022.01.T01:intron 30.0%
! ACTTTTGTATTTGTATGACC+AGG - Chr7:1446750-1446769 MsG0780036022.01.T01:intron 30.0%
! ATTTTCATTTGCACCCAAAT+TGG + Chr7:1446061-1446080 None:intergenic 30.0%
! CTTCTATTGCTTCCTTTTAA+TGG - Chr7:1444260-1444279 MsG0780036022.01.T01:intron 30.0%
! GCAGAATTGTGGATTTTTAT+TGG - Chr7:1444032-1444051 MsG0780036022.01.T01:CDS 30.0%
! GTTCATATTTTATCACAGGA+TGG - Chr7:1445655-1445674 MsG0780036022.01.T01:intron 30.0%
! TCCAACAAATTCTAGAAATG+GGG - Chr7:1445194-1445213 MsG0780036022.01.T01:intron 30.0%
! TCTATTGCTTCCTTTTAATG+GGG - Chr7:1444262-1444281 MsG0780036022.01.T01:intron 30.0%
! TGCAATATTAGTGCATGTTT+TGG - Chr7:1443077-1443096 MsG0780036022.01.T01:CDS 30.0%
! TTTCTTGATGGATATTAGGT+TGG - Chr7:1443477-1443496 MsG0780036022.01.T01:CDS 30.0%
! TTTTCATTTGCACCCAAATT+GGG + Chr7:1446060-1446079 None:intergenic 30.0%
! TTTTCTTGTTCCCCATTAAA+AGG + Chr7:1444275-1444294 None:intergenic 30.0%
!! TCTAGAATTTGTTGGATAGT+TGG + Chr7:1445190-1445209 None:intergenic 30.0%
!!! GGGTGTTTTTGCTATTAATT+TGG - Chr7:1445355-1445374 MsG0780036022.01.T01:intron 30.0%
!!! TGAAATGGTTTTAGTCAAGT+TGG + Chr7:1446502-1446521 None:intergenic 30.0%
AAATGAAAATGCAGGTGACT+TGG - Chr7:1446071-1446090 MsG0780036022.01.T01:intron 35.0%
ACCAGATACGATACTAAGAT+AGG - Chr7:1442867-1442886 MsG0780036022.01.T01:intron 35.0%
ACCTATCTTAGTATCGTATC+TGG + Chr7:1442871-1442890 None:intergenic 35.0%
AGATATTCAACAGCTCTTTC+GGG + Chr7:1445277-1445296 None:intergenic 35.0%
AGTATGACTAAGCCTGTATT+TGG + Chr7:1443343-1443362 None:intergenic 35.0%
ATACGTTGTTTATTGCAGTG+TGG - Chr7:1445108-1445127 MsG0780036022.01.T01:CDS 35.0%
ATATGTCAGATGCTTACGTA+TGG + Chr7:1444925-1444944 None:intergenic 35.0%
ATCACTTCTCCAAAGAGTTT+AGG + Chr7:1447370-1447389 None:intergenic 35.0%
ATGATACCTGCAAGATTTGA+GGG + Chr7:1446236-1446255 None:intergenic 35.0%
ATGGGAAAGCTAGATTATGT+GGG + Chr7:1445319-1445338 None:intergenic 35.0%
CAACATTACTAAACATGCCA+TGG + Chr7:1446930-1446949 None:intergenic 35.0%
CAATGAGATTAGATTCAGCT+TGG + Chr7:1445150-1445169 None:intergenic 35.0%
CCTAAGAATAAGAGAATAGG+CGG + Chr7:1445028-1445047 None:intergenic 35.0%
CTTCTCTCATTGAATGTCAA+TGG + Chr7:1443899-1443918 None:intergenic 35.0%
GAAAATTTGTACTTACGGTG+GGG + Chr7:1444425-1444444 None:intergenic 35.0%
GAATTGTATATTTCAGTGCG+TGG - Chr7:1447498-1447517 MsG0780036022.01.T01:five_prime_UTR 35.0%
GACATAGAAAACCCATTACA+TGG + Chr7:1443932-1443951 None:intergenic 35.0%
GATGATACCTTATTCTGCAA+AGG + Chr7:1444376-1444395 None:intergenic 35.0%
GATTAACGTGAAGACTCTTA+AGG - Chr7:1442466-1442485 MsG0780036022.01.T01:three_prime_UTR 35.0%
GGACCTTGGTTATAATACAA+AGG - Chr7:1446653-1446672 MsG0780036022.01.T01:intron 35.0%
GTTAGTAAGACATTAACAGC+AGG - Chr7:1444174-1444193 MsG0780036022.01.T01:intron 35.0%
TACTACAAGCATAAGTTGTG+CGG + Chr7:1445468-1445487 None:intergenic 35.0%
TAGATGGGTAATGCAATGAT+TGG - Chr7:1444548-1444567 MsG0780036022.01.T01:intron 35.0%
TATGTCAGATGCTTACGTAT+GGG + Chr7:1444924-1444943 None:intergenic 35.0%
TCTATGTATTTGCTTGTCCA+TGG - Chr7:1446910-1446929 MsG0780036022.01.T01:intron 35.0%
TGGGGAACAAGAAAAATCAT+TGG - Chr7:1444280-1444299 MsG0780036022.01.T01:intron 35.0%
TGTTTGTGTCCTAAACTCTT+TGG - Chr7:1447358-1447377 MsG0780036022.01.T01:CDS 35.0%
TTACGTCTTATAAATGAGCC+TGG - Chr7:1446398-1446417 MsG0780036022.01.T01:intron 35.0%
! AAAAATATAGAGGGAGCACA+GGG - Chr7:1443510-1443529 MsG0780036022.01.T01:CDS 35.0%
! AGAGTGCAAAACCAGTATTT+TGG + Chr7:1447006-1447025 None:intergenic 35.0%
! AGCAACTTGATTTTCTTCCA+AGG + Chr7:1443601-1443620 None:intergenic 35.0%
! ATCATTTTATCACTGGACCT+TGG - Chr7:1446639-1446658 MsG0780036022.01.T01:intron 35.0%
! CAACAAATTCTAGAAATGGG+GGG - Chr7:1445196-1445215 MsG0780036022.01.T01:intron 35.0%
! CACAACAATGCTTTTCATCA+AGG - Chr7:1443553-1443572 MsG0780036022.01.T01:intron 35.0%
! CAGAATAAGGTATCATCAAG+TGG - Chr7:1444379-1444398 MsG0780036022.01.T01:intron 35.0%
! CATAACTGACCATGACATTT+TGG - Chr7:1447146-1447165 MsG0780036022.01.T01:intron 35.0%
! CCAACAAATTCTAGAAATGG+GGG - Chr7:1445195-1445214 MsG0780036022.01.T01:intron 35.0%
! TAGGGTCATCATTTTATCAC+TGG - Chr7:1446632-1446651 MsG0780036022.01.T01:intron 35.0%
! TGCATGTCTAGAATCAATTC+TGG - Chr7:1443300-1443319 MsG0780036022.01.T01:intron 35.0%
!! ACTCATTTTGGTGATCCAAT+AGG + Chr7:1447258-1447277 None:intergenic 35.0%
!! TTCATCAAGGAAAAGTGCTA+AGG - Chr7:1443566-1443585 MsG0780036022.01.T01:intron 35.0%
ACTACAAGCATAAGTTGTGC+GGG + Chr7:1445467-1445486 None:intergenic 40.0%
ATTTCTGCGAAACAGTCAAC+AGG - Chr7:1446095-1446114 MsG0780036022.01.T01:intron 40.0%
CATGGGAAAGCTAGATTATG+TGG + Chr7:1445320-1445339 None:intergenic 40.0%
CCATACTCGATACTTCACAT+GGG + Chr7:1445337-1445356 None:intergenic 40.0%
CCGCCTATTCTCTTATTCTT+AGG - Chr7:1445025-1445044 MsG0780036022.01.T01:intron 40.0%
CTTTGCGTGCAATAAAAACG+AGG - Chr7:1447216-1447235 MsG0780036022.01.T01:intron 40.0%
GAAACTTCACAGCAGAACTT+TGG + Chr7:1442356-1442375 None:intergenic 40.0%
GAGATATCCACGTCTATTGT+CGG - Chr7:1442806-1442825 MsG0780036022.01.T01:intron 40.0%
GATCTTCCCTTTGCAGAATA+AGG - Chr7:1444366-1444385 MsG0780036022.01.T01:intron 40.0%
GATGATACCTGCAAGATTTG+AGG + Chr7:1446237-1446256 None:intergenic 40.0%
GCTGAATCTAATCTCATTGC+TGG - Chr7:1445151-1445170 MsG0780036022.01.T01:intron 40.0%
GTAGAGCTCAACCAAAATAC+TGG - Chr7:1446992-1447011 MsG0780036022.01.T01:intron 40.0%
GTGCAATAAAAACGAGGATC+TGG - Chr7:1447222-1447241 MsG0780036022.01.T01:intron 40.0%
GTTACAAAAGTGGGGTGATA+TGG - Chr7:1444010-1444029 MsG0780036022.01.T01:CDS 40.0%
TACACAGATGACGAGCTTAA+TGG - Chr7:1446548-1446567 MsG0780036022.01.T01:intron 40.0%
TAGTGACTGTGAAGCTAGAT+GGG - Chr7:1444533-1444552 MsG0780036022.01.T01:intron 40.0%
TGGATGAGTTCCATTAGGTT+TGG + Chr7:1446359-1446378 None:intergenic 40.0%
TGTCGTGATCATGTTGTCTA+AGG - Chr7:1443632-1443651 MsG0780036022.01.T01:CDS 40.0%
TGTTGGTACTTTCTGACTAG+GGG - Chr7:1443001-1443020 MsG0780036022.01.T01:intron 40.0%
TGTTTGCAGCAAAGTGGTTA+TGG - Chr7:1445698-1445717 MsG0780036022.01.T01:intron 40.0%
TTAGTGACTGTGAAGCTAGA+TGG - Chr7:1444532-1444551 MsG0780036022.01.T01:intron 40.0%
TTGGGTGCAAATGAAAATGC+AGG - Chr7:1446063-1446082 MsG0780036022.01.T01:intron 40.0%
TTTCCTAGTTCCTGAAGCAT+GGG + Chr7:1446329-1446348 None:intergenic 40.0%
TTTGTGTGTTTGCAGCAAAG+TGG - Chr7:1445692-1445711 MsG0780036022.01.T01:intron 40.0%
! AATCAGGGCATTCCCAATTT+GGG - Chr7:1446045-1446064 MsG0780036022.01.T01:intron 40.0%
! AATTCTGGCTACTCCAAACA+AGG - Chr7:1443315-1443334 MsG0780036022.01.T01:intron 40.0%
! GAAAAATATAGAGGGAGCAC+AGG - Chr7:1443509-1443528 MsG0780036022.01.T01:CDS 40.0%
! GAACACGGGATTTAAAGTGT+TGG - Chr7:1442984-1443003 MsG0780036022.01.T01:intron 40.0%
! GTGTTGGTACTTTCTGACTA+GGG - Chr7:1443000-1443019 MsG0780036022.01.T01:intron 40.0%
! TAATCAGGGCATTCCCAATT+TGG - Chr7:1446044-1446063 MsG0780036022.01.T01:intron 40.0%
! TTGGTGATCCAATAGGTAGT+TGG + Chr7:1447251-1447270 None:intergenic 40.0%
! TTTTGGCAGCTTGAGGATAT+GGG - Chr7:1447163-1447182 MsG0780036022.01.T01:intron 40.0%
!! AAAAGCATTGTTGTGCAGCA+GGG + Chr7:1443548-1443567 None:intergenic 40.0%
!! AGTGTTGGTACTTTCTGACT+AGG - Chr7:1442999-1443018 MsG0780036022.01.T01:intron 40.0%
!! ATTTTGGCAGCTTGAGGATA+TGG - Chr7:1447162-1447181 MsG0780036022.01.T01:intron 40.0%
!! CCATGTGAAGTATCGAGTAT+GGG - Chr7:1445335-1445354 MsG0780036022.01.T01:intron 40.0%
!! CCCCCATTTCTAGAATTTGT+TGG + Chr7:1445198-1445217 None:intergenic 40.0%
AAGAGAACGAGGCCATTCAA+CGG - Chr7:1446828-1446847 MsG0780036022.01.T01:intron 45.0%
AAGTGTCAGTGCTTTAGTGC+TGG - Chr7:1442781-1442800 MsG0780036022.01.T01:intron 45.0%
ACACCACAAGCAGATGCATA+GGG - Chr7:1446614-1446633 MsG0780036022.01.T01:intron 45.0%
ACACCGACATGTATCGAACA+CGG - Chr7:1442969-1442988 MsG0780036022.01.T01:intron 45.0%
ACACCTCCAACACAAGATCT+CGG + Chr7:1447195-1447214 None:intergenic 45.0%
AGAAGTCAGCTTGATGCTCT+TGG + Chr7:1446379-1446398 None:intergenic 45.0%
AGCAAACCCTCAAATCTTGC+AGG - Chr7:1446227-1446246 MsG0780036022.01.T01:CDS 45.0%
AGTGTCAGTGCTTTAGTGCT+GGG - Chr7:1442782-1442801 MsG0780036022.01.T01:intron 45.0%
AGTTCACAGTACACACCTGA+GGG + Chr7:1445958-1445977 None:intergenic 45.0%
ATCCCGTGTTCGATACATGT+CGG + Chr7:1442975-1442994 None:intergenic 45.0%
CAATGAATAACGGTGAAGGC+AGG - Chr7:1445559-1445578 MsG0780036022.01.T01:intron 45.0%
CCAAACAAGGAGCCAAATAC+AGG - Chr7:1443328-1443347 MsG0780036022.01.T01:intron 45.0%
CCAAGTGAACGCTCAAGATA+CGG - Chr7:1442505-1442524 MsG0780036022.01.T01:three_prime_UTR 45.0%
CCCATACTCGATACTTCACA+TGG + Chr7:1445338-1445357 None:intergenic 45.0%
CGTCTTATAAATGAGCCTGG+AGG - Chr7:1446401-1446420 MsG0780036022.01.T01:intron 45.0%
CTCAAGCTGCCAAAATGTCA+TGG + Chr7:1447158-1447177 None:intergenic 45.0%
GCTCTTGGATGAGTTCCATT+AGG + Chr7:1446364-1446383 None:intergenic 45.0%
GTTCCAAGCCTTGAGAACAA+TGG - Chr7:1446200-1446219 MsG0780036022.01.T01:intron 45.0%
GTTGGGGAAGCTAGAAAACA+AGG - Chr7:1443748-1443767 MsG0780036022.01.T01:intron 45.0%
TAATCTTACTCTTCGCCTCC+AGG + Chr7:1446419-1446438 None:intergenic 45.0%
TATATGCAGCACGAAGAGCT+CGG + Chr7:1445249-1445268 None:intergenic 45.0%
TGCTAAGGATGAGACTACCT+TGG - Chr7:1443581-1443600 MsG0780036022.01.T01:intron 45.0%
TGCTTGCACCATTGTTCTCA+AGG + Chr7:1446211-1446230 None:intergenic 45.0%
TGTATGACCAGGAACCTAGA+GGG - Chr7:1446761-1446780 MsG0780036022.01.T01:intron 45.0%
TTACGTATGGGAGGAGTTAC+AGG + Chr7:1444912-1444931 None:intergenic 45.0%
TTGCTGCATCCACCAATGTT+GGG - Chr7:1445850-1445869 MsG0780036022.01.T01:intron 45.0%
TTGTATGACCAGGAACCTAG+AGG - Chr7:1446760-1446779 MsG0780036022.01.T01:intron 45.0%
TTTGGCAGCTTGAGGATATG+GGG - Chr7:1447164-1447183 MsG0780036022.01.T01:intron 45.0%
! AGGGGTTTTTGCTTCGGTTT+GGG + Chr7:1442396-1442415 None:intergenic 45.0%
! CAAATTCTAGAAATGGGGGG+AGG - Chr7:1445199-1445218 MsG0780036022.01.T01:intron 45.0%
! CCTGTATTTGGCTCCTTGTT+TGG + Chr7:1443331-1443350 None:intergenic 45.0%
! GTAGTTACATGTGTCGGTGT+CGG - Chr7:1442735-1442754 MsG0780036022.01.T01:intron 45.0%
! GTTTTCTTCCTGCCCAACAT+TGG + Chr7:1445865-1445884 None:intergenic 45.0%
! TCACTAGCTTACCCGTTGAA+TGG + Chr7:1446843-1446862 None:intergenic 45.0%
! TTCGATACATGTCGGTGTCT+GGG + Chr7:1442967-1442986 None:intergenic 45.0%
!! AAGTTCAGTGGGTTGGTGTT+AGG + Chr7:1445932-1445951 None:intergenic 45.0%
!! CATGACATTTTGGCAGCTTG+AGG - Chr7:1447156-1447175 MsG0780036022.01.T01:intron 45.0%
!! CCCATGTGAAGTATCGAGTA+TGG - Chr7:1445334-1445353 MsG0780036022.01.T01:intron 45.0%
!! CTCTTCTGGGGTGATAGTAA+TGG + Chr7:1446813-1446832 None:intergenic 45.0%
!! GAAAAGCATTGTTGTGCAGC+AGG + Chr7:1443549-1443568 None:intergenic 45.0%
!!! AATAATTCAATTTTTTTTTT+AGG - Chr7:1442551-1442570 MsG0780036022.01.T01:three_prime_UTR 5.0%
!!! TTCTTTTAATTTTAATTATT+GGG - Chr7:1442584-1442603 MsG0780036022.01.T01:exon 5.0%
!!! TTTCTTTTAATTTTAATTAT+TGG - Chr7:1442583-1442602 MsG0780036022.01.T01:exon 5.0%
AATGGCCTCGTTCTCTTCTG+GGG + Chr7:1446825-1446844 None:intergenic 50.0%
ACCTGAGGGAACAAGTTCAG+TGG + Chr7:1445944-1445963 None:intergenic 50.0%
AGAAATGGGGGGAGGAAGTT+GGG - Chr7:1445207-1445226 MsG0780036022.01.T01:intron 50.0%
AGAGAACGAGGCCATTCAAC+GGG - Chr7:1446829-1446848 MsG0780036022.01.T01:intron 50.0%
AGGAACCTAGAGGGACAGTT+GGG - Chr7:1446770-1446789 MsG0780036022.01.T01:intron 50.0%
AGGGAACAAGTTCAGTGGGT+TGG + Chr7:1445939-1445958 None:intergenic 50.0%
AGTGTGGTGCCTGACACATA+CGG - Chr7:1445124-1445143 MsG0780036022.01.T01:CDS 50.0%
CACACCACAAGCAGATGCAT+AGG - Chr7:1446613-1446632 MsG0780036022.01.T01:intron 50.0%
CACCGACATGTATCGAACAC+GGG - Chr7:1442970-1442989 MsG0780036022.01.T01:intron 50.0%
CAGTTCACAGTACACACCTG+AGG + Chr7:1445959-1445978 None:intergenic 50.0%
CCGTATCTTGAGCGTTCACT+TGG + Chr7:1442508-1442527 None:intergenic 50.0%
CCTGAGGGAACAAGTTCAGT+GGG + Chr7:1445943-1445962 None:intergenic 50.0%
CGACGTATCAGTGTCGTATC+AGG + Chr7:1442677-1442696 None:intergenic 50.0%
GAATGGCCTCGTTCTCTTCT+GGG + Chr7:1446826-1446845 None:intergenic 50.0%
GAGGCAAGAACTTGCAGGTT+GGG + Chr7:1444736-1444755 None:intergenic 50.0%
GCACCATTGTTCTCAAGGCT+TGG + Chr7:1446206-1446225 None:intergenic 50.0%
GGAAGAAAACCCTTCAGCTC+AGG - Chr7:1445875-1445894 MsG0780036022.01.T01:intron 50.0%
GGAGAATCCAATCTTGCGCA+AGG - Chr7:1444885-1444904 MsG0780036022.01.T01:intron 50.0%
GGGGTGATAGTAATGGTCTG+AGG + Chr7:1446806-1446825 None:intergenic 50.0%
GGGGTGATATGGCAGAATTG+TGG - Chr7:1444021-1444040 MsG0780036022.01.T01:CDS 50.0%
GTCAGATGCTTACGTATGGG+AGG + Chr7:1444921-1444940 None:intergenic 50.0%
GTTCGACCGAGATCTTGTGT+TGG - Chr7:1447186-1447205 MsG0780036022.01.T01:intron 50.0%
GTTGCTGCATCCACCAATGT+TGG - Chr7:1445849-1445868 MsG0780036022.01.T01:intron 50.0%
TACAGGACCTTGCGCAAGAT+TGG + Chr7:1444895-1444914 None:intergenic 50.0%
TAGAAATGGGGGGAGGAAGT+TGG - Chr7:1445206-1445225 MsG0780036022.01.T01:intron 50.0%
TATCACCCCAGAAGAGAACG+AGG - Chr7:1446817-1446836 MsG0780036022.01.T01:intron 50.0%
TCAGCTCCTGCATCAACTGT+CGG - Chr7:1444772-1444791 MsG0780036022.01.T01:intron 50.0%
TCTGGCAGCCAACTACCTAT+TGG - Chr7:1447240-1447259 MsG0780036022.01.T01:intron 50.0%
TGAATGGCCTCGTTCTCTTC+TGG + Chr7:1446827-1446846 None:intergenic 50.0%
TGACCCTATGCATCTGCTTG+TGG + Chr7:1446620-1446639 None:intergenic 50.0%
TTCTTCCTGCCCAACATTGG+TGG + Chr7:1445862-1445881 None:intergenic 50.0%
TTCTTTGCAGCCCATGCTTC+AGG - Chr7:1446316-1446335 MsG0780036022.01.T01:CDS 50.0%
! AGCTGAGGTGTTTGACAAGG+GGG + Chr7:1444758-1444777 None:intergenic 50.0%
! AGGAGCTGAGGTGTTTGACA+AGG + Chr7:1444761-1444780 None:intergenic 50.0%
! GAGCTGAGGTGTTTGACAAG+GGG + Chr7:1444759-1444778 None:intergenic 50.0%
! GAGGGGTTTTTGCTTCGGTT+TGG + Chr7:1442397-1442416 None:intergenic 50.0%
! GGAGCTGAGGTGTTTGACAA+GGG + Chr7:1444760-1444779 None:intergenic 50.0%
! GTTCGATACATGTCGGTGTC+TGG + Chr7:1442968-1442987 None:intergenic 50.0%
! TACTGTCCGACAGTTGATGC+AGG + Chr7:1444781-1444800 None:intergenic 50.0%
! TGCTGGAGCTTCAGCTTGTT+CGG + Chr7:1445829-1445848 None:intergenic 50.0%
! TGGAGGAGGGGTTTTTGCTT+CGG + Chr7:1442402-1442421 None:intergenic 50.0%
!! GGGGTTTTTGCTTCGGTTTG+GGG + Chr7:1442395-1442414 None:intergenic 50.0%
!!! GGGTTTTTGCTTCGGTTTGG+GGG + Chr7:1442394-1442413 None:intergenic 50.0%
AAGCACCCAACTGTCCCTCT+AGG + Chr7:1446778-1446797 None:intergenic 55.0%
AGAGGGACAGTTGGGTGCTT+TGG - Chr7:1446778-1446797 MsG0780036022.01.T01:intron 55.0%
CAACTGTCCCTCTAGGTTCC+TGG + Chr7:1446771-1446790 None:intergenic 55.0%
CAGCCCATGCTTCAGGAACT+AGG - Chr7:1446323-1446342 MsG0780036022.01.T01:CDS 55.0%
CAGGAACCTAGAGGGACAGT+TGG - Chr7:1446769-1446788 MsG0780036022.01.T01:intron 55.0%
CGACCGAGATCTTGTGTTGG+AGG - Chr7:1447189-1447208 MsG0780036022.01.T01:intron 55.0%
GGAGGCAAGAACTTGCAGGT+TGG + Chr7:1444737-1444756 None:intergenic 55.0%
GGTGTGTCCGACAATAGACG+TGG + Chr7:1442816-1442835 None:intergenic 55.0%
GTGCGCGGTGGTGATTTCAT+CGG - Chr7:1442426-1442445 MsG0780036022.01.T01:three_prime_UTR 55.0%
TCAGCTTGGCCGTATGTGTC+AGG + Chr7:1445136-1445155 None:intergenic 55.0%
TGAAATCACCACCGCGCACA+CGG + Chr7:1442425-1442444 None:intergenic 55.0%
TGCATCCACCAATGTTGGGC+AGG - Chr7:1445854-1445873 MsG0780036022.01.T01:intron 55.0%
! CCCACTGAACTTGTTCCCTC+AGG - Chr7:1445940-1445959 MsG0780036022.01.T01:intron 55.0%
! CTGGAGCTTCAGCTTGTTCG+GGG + Chr7:1445827-1445846 None:intergenic 55.0%
! GACAGTTGATGCAGGAGCTG+AGG + Chr7:1444773-1444792 None:intergenic 55.0%
! GCTGGAGCTTCAGCTTGTTC+GGG + Chr7:1445828-1445847 None:intergenic 55.0%
! TGAGGTGTTTGACAAGGGGG+AGG + Chr7:1444755-1444774 None:intergenic 55.0%
! TTGGTGGATGCAGCAACTGC+TGG + Chr7:1445846-1445865 None:intergenic 55.0%
AGGGGGAGGCAAGAACTTGC+AGG + Chr7:1444741-1444760 None:intergenic 60.0%
CAACCAGCTGTGCCTGCTGT+GGG - Chr7:1445906-1445925 MsG0780036022.01.T01:intron 60.0%
CACAGCAGGCACAGCTGGTT+GGG + Chr7:1445907-1445926 None:intergenic 60.0%
TGGGGGGAGGAAGTTGGGAT+CGG - Chr7:1445212-1445231 MsG0780036022.01.T01:intron 60.0%
!! GTTGGTGTTAGGCCCACAGC+AGG + Chr7:1445921-1445940 None:intergenic 60.0%
AATCACCACCGCGCACACGG+TGG + Chr7:1442422-1442441 None:intergenic 65.0%
CCAACCAGCTGTGCCTGCTG+TGG - Chr7:1445905-1445924 MsG0780036022.01.T01:intron 65.0%
CCACAGCAGGCACAGCTGGT+TGG + Chr7:1445908-1445927 None:intergenic 65.0%
GGGCTGGAGCCTGAGCTGAA+GGG + Chr7:1445887-1445906 None:intergenic 65.0%
GGGGGGAGGAAGTTGGGATC+GGG - Chr7:1445213-1445232 MsG0780036022.01.T01:intron 65.0%
TGGGGCAGCTGAAGCAGCAG+AGG + Chr7:1444407-1444426 None:intergenic 65.0%
! TGGGCTGGAGCCTGAGCTGA+AGG + Chr7:1445888-1445907 None:intergenic 65.0%
ACCGCGCACACGGTGGAGGA+GGG + Chr7:1442415-1442434 None:intergenic 70.0%
AGGCCCACAGCAGGCACAGC+TGG + Chr7:1445912-1445931 None:intergenic 70.0%
GCAGGCACAGCTGGTTGGGC+TGG + Chr7:1445903-1445922 None:intergenic 70.0%
CACCACCGCGCACACGGTGG+AGG + Chr7:1442419-1442438 None:intergenic 75.0%
CACCGCGCACACGGTGGAGG+AGG + Chr7:1442416-1442435 None:intergenic 75.0%
CCCCTCCTCCACCGTGTGCG+CGG - Chr7:1442411-1442430 MsG0780036022.01.T01:three_prime_UTR 75.0%
CCGCGCACACGGTGGAGGAG+GGG + Chr7:1442414-1442433 None:intergenic 75.0%
CTCCTCCACCGTGTGCGCGG+TGG - Chr7:1442414-1442433 MsG0780036022.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 1442349 1447528 1442349 ID=MsG0780036022.01;Name=MsG0780036022.01
Chr7 mRNA 1442349 1447528 1442349 ID=MsG0780036022.01.T01;Parent=MsG0780036022.01;Name=MsG0780036022.01.T01;_AED=0.50;_eAED=0.50;_QI=112|0.8|0.90|1|1|1|11|240|345
Chr7 exon 1442349 1442705 1442349 ID=MsG0780036022.01.T01:exon:1753;Parent=MsG0780036022.01.T01
Chr7 exon 1443027 1443105 1443027 ID=MsG0780036022.01.T01:exon:1752;Parent=MsG0780036022.01.T01
Chr7 exon 1443448 1443551 1443448 ID=MsG0780036022.01.T01:exon:1751;Parent=MsG0780036022.01.T01
Chr7 exon 1443629 1443676 1443629 ID=MsG0780036022.01.T01:exon:1750;Parent=MsG0780036022.01.T01
Chr7 exon 1443761 1443826 1443761 ID=MsG0780036022.01.T01:exon:1749;Parent=MsG0780036022.01.T01
Chr7 exon 1443954 1444058 1443954 ID=MsG0780036022.01.T01:exon:1748;Parent=MsG0780036022.01.T01
Chr7 exon 1444574 1444751 1444574 ID=MsG0780036022.01.T01:exon:1747;Parent=MsG0780036022.01.T01
Chr7 exon 1445080 1445148 1445080 ID=MsG0780036022.01.T01:exon:1746;Parent=MsG0780036022.01.T01
Chr7 exon 1445449 1445495 1445449 ID=MsG0780036022.01.T01:exon:1745;Parent=MsG0780036022.01.T01
Chr7 exon 1446224 1446382 1446224 ID=MsG0780036022.01.T01:exon:1744;Parent=MsG0780036022.01.T01
Chr7 exon 1447351 1447528 1447351 ID=MsG0780036022.01.T01:exon:1743;Parent=MsG0780036022.01.T01
Chr7 five_prime_UTR 1447417 1447528 1447417 ID=MsG0780036022.01.T01:five_prime_utr;Parent=MsG0780036022.01.T01
Chr7 CDS 1447351 1447416 1447351 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1446224 1446382 1446224 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1445449 1445495 1445449 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1445080 1445148 1445080 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1444574 1444751 1444574 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1443954 1444058 1443954 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1443761 1443826 1443761 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1443629 1443676 1443629 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1443448 1443551 1443448 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1443027 1443105 1443027 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 CDS 1442589 1442705 1442589 ID=MsG0780036022.01.T01:cds;Parent=MsG0780036022.01.T01
Chr7 three_prime_UTR 1442349 1442588 1442349 ID=MsG0780036022.01.T01:three_prime_utr;Parent=MsG0780036022.01.T01
Gene Sequence

>MsG0780036022.01.T01

ATGAAGATTAACGTGAAGACTCTTAAGGGAACTCACTTTGAGATCCAAGTGAACGCTCAAGATACGGTTGGCGATGTGAAGAAAAATATAGAGGGAGCACAGGGTGCTGCTGTTTACCCTGCTGCACAACAATGCTTTTCATCAAGGAAAAGTGCTAAGGATGAGACTACCTTGGAAGAAAATCAAGTTGCTGAGAATAGTTTTGTCGTGATCATGTTGTCTAAGAATAAGGTATCATCAAGTGGAGCCTCTGCTGCTTCAGCTGCCCCACCGCAGCCCAACCTGCAAGTTCTTGCCTCCCCCTTGTCAAACACCTCAGCTCCTGCATCAACTGTCGGACATGTGGTGCCTGACACATACGGCCAAGCTGAATCTAATCTCATTGCTGGAAGTACTTTAGAACCAACTATCCAACAAATTCTAGAAATGGGGGGAGGAAGTTGGGATCGGGACACTGTGATCCGAGCTCTTCGTGCTGCATATAATAATCCCGAAAGAGCTGTTGAATATCTATATTCTGGCATCCCCGAACAAGCTGAAGCTCCAGCAGTTGCTGCATCCACCAATGTTGGGCAGGAAGAAAACCCTTCAGCTCAGGCTCCAGCCCAACCAGCTGTGCCTGCTGGCATTCCCAATTTGGGTGCAAATGAAAATGCAGGTGACTTGGAATTTCTGCGAAACAGTCAACAGTTCCAAGCCTTGAGAACAATGGTGCAAGCAAACCCTCAAATCTTGCAGCCCATGCTTCAGGAACTAGGAAAACAAAATCCAAACCTAATGGAACTCATCCAAGAGCATCAAGCTGACTTCTTACGTCTTATAAATGAGCCTGGAGGCGAAGAGAACCTAGAGGGACAGTTGGGTGCTTTGGCTCCTCAGACCATTACTATCACCCCAGAAGAGAACGAGGCCATTCAACGGCTTGAGGATATGGGGTTCGACCGAGATCTTGTGTTGGAGGTGTTCTTTGCGTGCAATAAAAACGAGGATCTGGCAGCCAACTACCTATTGGATCACCAAAATGAGTTTGATGATTAG
Protein sequence

>MsG0780036022.01.T01

MKINVKTLKGTHFEIQVNAQDTVGDVKKNIEGAQGAAVYPAAQQCFSSRKSAKDETTLEENQVAENSFVVIMLSKNKVSSSGASAASAAPPQPNLQVLASPLSNTSAPASTVGHVVPDTYGQAESNLIAGSTLEPTIQQILEMGGGSWDRDTVIRALRAAYNNPERAVEYLYSGIPEQAEAPAVAASTNVGQEENPSAQAPAQPAVPAGIPNLGANENAGDLEFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPNLMELIQEHQADFLRLINEPGGEENLEGQLGALAPQTITITPEENEAIQRLEDMGFDRDLVLEVFFACNKNEDLAANYLLDHQNEFDD*