AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016651.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016651.01.T01 MTR_3g092580 71.000 200 1 2 1 143 108 307 5.69e-67 209
MsG0380016651.01.T01 MTR_8g058530 47.030 202 57 4 1 156 1 198 1.43e-42 144
MsG0380016651.01.T01 MTR_7g108810 47.030 202 57 4 1 156 102 299 1.17e-41 144
MsG0380016651.01.T01 MTR_1g083400 46.231 199 38 3 1 142 32 218 2.78e-40 138
MsG0380016651.01.T01 MTR_7g112760 45.283 212 42 4 1 155 1 195 4.21e-40 136
MsG0380016651.01.T01 MTR_7g112760 45.283 212 42 4 1 155 1 195 9.91e-40 136
MsG0380016651.01.T01 MTR_1g088180 43.902 205 67 4 1 158 1 204 5.03e-37 133
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016651.01.T01 AT3G49430 59.500 200 23 3 1 143 1 199 7.64e-58 183
MsG0380016651.01.T01 AT3G49430 59.500 200 23 3 1 143 1 199 9.46e-58 183
MsG0380016651.01.T01 AT3G49430 59.500 200 23 3 1 143 1 199 9.46e-58 183
MsG0380016651.01.T01 AT3G49430 59.500 200 23 3 1 143 1 199 9.46e-58 183
MsG0380016651.01.T01 AT3G49430 59.500 200 23 3 1 143 1 199 9.46e-58 183
MsG0380016651.01.T01 AT3G49430 59.500 200 23 3 1 143 1 199 9.46e-58 183
MsG0380016651.01.T01 AT3G49430 59.500 200 23 3 1 143 1 199 9.46e-58 183
MsG0380016651.01.T01 AT1G09140 47.980 198 55 6 1 154 1 194 1.59e-42 142
MsG0380016651.01.T01 AT1G09140 47.980 198 55 6 1 154 1 194 3.69e-42 142
MsG0380016651.01.T01 AT1G09140 47.980 198 55 6 1 154 1 194 3.86e-42 142
MsG0380016651.01.T01 AT1G02840 41.784 213 56 5 1 145 1 213 1.38e-34 124
MsG0380016651.01.T01 AT1G02840 41.784 213 56 5 1 145 1 213 1.94e-34 122
MsG0380016651.01.T01 AT1G02840 41.784 213 56 5 1 145 1 213 2.45e-34 122
MsG0380016651.01.T01 AT1G02840 41.784 213 56 5 1 145 1 213 2.45e-34 122
MsG0380016651.01.T01 AT1G02840 41.784 213 56 5 1 145 1 213 2.45e-34 122
MsG0380016651.01.T01 AT4G02430 43.147 197 55 5 1 143 1 194 1.68e-32 118
MsG0380016651.01.T01 AT4G02430 43.147 197 55 5 1 143 1 194 1.73e-32 117
MsG0380016651.01.T01 AT4G02430 59.524 84 12 1 1 62 1 84 1.66e-22 89.4
MsG0380016651.01.T01 AT4G02430 41.611 149 52 4 27 143 47 192 5.56e-21 87.4

Find 93 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCAAGGATTGCTCTCT+TGG 0.179428 3:-86145021 MsG0380016651.01.T01:intron
AGTTGATTTGAATTATTTAA+TGG 0.187512 3:-86141207 MsG0380016651.01.T01:three_prime_UTR
TGCTCAAGCTGTAATCTTTC+TGG 0.210621 3:-86146003 MsG0380016651.01.T01:intron
ACTTTGATGGTTGTCGATTA+AGG 0.211961 3:-86143964 MsG0380016651.01.T01:CDS
TAGACTTGCTGCTACCATTT+TGG 0.218456 3:-86141115 MsG0380016651.01.T01:three_prime_UTR
CTAAAGCTCCTGCATTATTC+TGG 0.228945 3:-86141249 MsG0380016651.01.T01:exon
CCTGCATTATTCTGGGATAT+TGG 0.260468 3:-86141241 MsG0380016651.01.T01:three_prime_UTR
TTATAGCTTTGGAGCATCTT+TGG 0.264980 3:-86145074 MsG0380016651.01.T01:five_prime_UTR
TTTCGGACTTCTGCTCCTGC+TGG 0.293656 3:+86142034 None:intergenic
GACTTCAGTTTCGCTGCGAT+TGG 0.299037 3:-86146027 MsG0380016651.01.T01:five_prime_UTR
GGTGGTGGTGGCGGCGGTGG+TGG 0.302105 3:-86143813 MsG0380016651.01.T01:CDS
CGGCGGTGACGGTGCTGGTG+GGG 0.314004 3:-86143781 MsG0380016651.01.T01:CDS
TTTCAATATTGTTATAGCTT+TGG 0.337792 3:-86145085 MsG0380016651.01.T01:five_prime_UTR
CAAATGCTAATGGTATTTAT+AGG 0.339046 3:+86141025 None:intergenic
TATGGTGGTGGTGGCGGCGG+TGG 0.349227 3:-86143816 MsG0380016651.01.T01:CDS
GGCGGTGGTGGCAGAGGCGG+CGG 0.350418 3:-86143801 MsG0380016651.01.T01:CDS
CTTTGATGGTTGTCGATTAA+GGG 0.353926 3:-86143963 MsG0380016651.01.T01:intron
CTTGGGCGAGATCATATATT+CGG 0.363557 3:-86142410 MsG0380016651.01.T01:CDS
GGTGGCGGCGGTGGTGGCAG+AGG 0.366433 3:-86143807 MsG0380016651.01.T01:CDS
GCCGCAGCAGAAGCCCCAGC+AGG 0.370082 3:-86142049 MsG0380016651.01.T01:CDS
GGCGGTGACGGTGCTGGTGG+GGG 0.372949 3:-86143780 MsG0380016651.01.T01:CDS
AGATGCTGAAGATGCAATTC+GGG 0.378655 3:-86144002 MsG0380016651.01.T01:CDS
TTCGGACTTCTGCTCCTGCT+GGG 0.379407 3:+86142035 None:intergenic
GAGATGCTGAAGATGCAATT+CGG 0.381400 3:-86144003 MsG0380016651.01.T01:CDS
TATCAGTTTGGTTACTCTGT+AGG 0.382172 3:-86141151 MsG0380016651.01.T01:three_prime_UTR
ATCAGTTTGGTTACTCTGTA+GGG 0.386960 3:-86141150 MsG0380016651.01.T01:three_prime_UTR
GTCTATTAAACATGAATGTT+GGG 0.396844 3:-86141084 MsG0380016651.01.T01:three_prime_UTR
GGCGGCGGTGACGGTGCTGG+TGG 0.397097 3:-86143783 MsG0380016651.01.T01:CDS
GGCAGAGGCGGCGGCGGTGA+CGG 0.399302 3:-86143792 MsG0380016651.01.T01:CDS
GGGTATGGTGGTGGTGGCGG+CGG 0.404796 3:-86143819 MsG0380016651.01.T01:CDS
GGCGGCGGTGGTGGCAGAGG+CGG 0.408001 3:-86143804 MsG0380016651.01.T01:CDS
GCGGCGGTGACGGTGCTGGT+GGG 0.412764 3:-86143782 MsG0380016651.01.T01:CDS
ATGATGGCCCTCTGCCTCCA+TGG 0.413987 3:+86143856 None:intergenic
AAAATGTCTCCAAATGCTAA+TGG 0.420292 3:+86141015 None:intergenic
TACTCTTGATGCTGTTCTCA+TGG 0.421071 3:-86140863 MsG0380016651.01.T01:three_prime_UTR
TGTCTATTAAACATGAATGT+TGG 0.423361 3:-86141085 MsG0380016651.01.T01:three_prime_UTR
GAGCTTGCCCATGGAGGCAG+AGG 0.428432 3:-86143864 MsG0380016651.01.T01:CDS
GTGGAGCACGGCTCTCTTCA+AGG 0.429609 3:-86145034 MsG0380016651.01.T01:five_prime_UTR
CTATAAATACCATTAGCATT+TGG 0.435182 3:-86141024 MsG0380016651.01.T01:three_prime_UTR
CGTGGGTATGGTGGTGGTGG+CGG 0.441938 3:-86143822 MsG0380016651.01.T01:CDS
GGCGGCGGCGGTGACGGTGC+TGG 0.443757 3:-86143786 MsG0380016651.01.T01:CDS
CGTGATGGTTACAACTTTGA+TGG 0.445163 3:-86143977 MsG0380016651.01.T01:CDS
GCAGGAGCAGAAGTCCGAAA+AGG 0.447779 3:-86142031 MsG0380016651.01.T01:CDS
ATAGGTACCTTGTGTTGAAA+AGG 0.449266 3:+86141043 None:intergenic
AAGCGTTTGTTTAGAGTGGT+TGG 0.451223 3:-86140970 MsG0380016651.01.T01:three_prime_UTR
GGTGGTGGCAGAGGCGGCGG+CGG 0.454844 3:-86143798 MsG0380016651.01.T01:CDS
CAAGAACAGTCTAATAAAGC+AGG 0.456970 3:+86140922 None:intergenic
CACCGAGTTTAGAAATCCTT+GGG 0.466660 3:-86142427 MsG0380016651.01.T01:CDS
CAGGAGCAGAAGTCCGAAAA+GGG 0.468055 3:-86142030 MsG0380016651.01.T01:CDS
TAAAGCTCCTGCATTATTCT+GGG 0.469332 3:-86141248 MsG0380016651.01.T01:three_prime_UTR
TCTCGCCATTCTGAATTTCG+AGG 0.470913 3:-86143744 MsG0380016651.01.T01:intron
ACTTCAGTTTCGCTGCGATT+GGG 0.471440 3:-86146026 MsG0380016651.01.T01:five_prime_UTR
ATAGACAGAGAAGACCAAAA+TGG 0.474107 3:+86141101 None:intergenic
ACACCGAGTTTAGAAATCCT+TGG 0.480051 3:-86142428 MsG0380016651.01.T01:CDS
TGATGGCCCTCTGCCTCCAT+GGG 0.481565 3:+86143857 None:intergenic
AGACGTGGGTATGGTGGTGG+TGG 0.495715 3:-86143825 MsG0380016651.01.T01:CDS
TTTAATGGATAATTATGTAC+CGG 0.499518 3:-86141192 MsG0380016651.01.T01:three_prime_UTR
AAATAAGCGTTTGTTTAGAG+TGG 0.502378 3:-86140974 MsG0380016651.01.T01:three_prime_UTR
AGTATGAGAGCAGTCGTTCA+AGG 0.508477 3:-86142073 MsG0380016651.01.T01:CDS
TCCTGCTGGGGCTTCTGCTG+CGG 0.520416 3:+86142048 None:intergenic
CTCTCTCTCTCGAATTCGCA+GGG 0.523894 3:-86146066 MsG0380016651.01.T01:five_prime_UTR
TCAAGTGACAGACGTGGGTA+TGG 0.524129 3:-86143834 MsG0380016651.01.T01:CDS
AATTGAAGATCTGTTCTACA+AGG 0.526628 3:-86144764 MsG0380016651.01.T01:intron
TTGCAGGTTCTGTCTGGTAG+CGG 0.530230 3:-86141297 MsG0380016651.01.T01:intron
CCAATATCCCAGAATAATGC+AGG 0.535632 3:+86141241 None:intergenic
ATGAATGTTGGGTATTTGCC+TGG 0.535987 3:-86141073 MsG0380016651.01.T01:three_prime_UTR
AGCGAAACTGAAGTCGAAGC+TGG 0.537136 3:+86146035 None:intergenic
TCTGATTCTCTTATATCAGC+GGG 0.538836 3:+86144787 None:intergenic
TCGGACTTCTGCTCCTGCTG+GGG 0.539897 3:+86142036 None:intergenic
TTGTAGGTGGAGCTTGCCCA+TGG 0.543564 3:-86143873 MsG0380016651.01.T01:intron
CGCCCAAGGATTTCTAAACT+CGG 0.544119 3:+86142425 None:intergenic
CCACGTCTGTCACTTGATGA+TGG 0.546991 3:+86143840 None:intergenic
TTGGGCGAGATCATATATTC+GGG 0.556218 3:-86142409 MsG0380016651.01.T01:intron
TTCTGATTCTCTTATATCAG+CGG 0.559626 3:+86144786 None:intergenic
GATGCAATTCGGGGTCGTGA+TGG 0.566481 3:-86143992 MsG0380016651.01.T01:CDS
ATTCTCTTATATCAGCGGGC+AGG 0.571374 3:+86144791 None:intergenic
GACAGACGTGGGTATGGTGG+TGG 0.572890 3:-86143828 MsG0380016651.01.T01:CDS
GAAGTCCGAAAAGGGCCAGA+AGG 0.575911 3:-86142022 MsG0380016651.01.T01:intron
TGTTGAAAAGGACAATAGCC+AGG 0.577777 3:+86141055 None:intergenic
CATAATTAGTGTAATCAACA+AGG 0.593738 3:+86142580 None:intergenic
CGAATATATGATCTCGCCCA+AGG 0.595825 3:+86142411 None:intergenic
ATGAGCAATGGAGTGGAGCA+CGG 0.597948 3:-86145046 MsG0380016651.01.T01:five_prime_UTR
TCTTTGGAGCAAATGAGCAA+TGG 0.611080 3:-86145058 MsG0380016651.01.T01:five_prime_UTR
AATGGCGAGAGACACCAAAA+CGG 0.624683 3:+86143757 None:intergenic
AAGAACAGTCTAATAAAGCA+GGG 0.626782 3:+86140923 None:intergenic
GGAGCAAATGAGCAATGGAG+TGG 0.639172 3:-86145053 MsG0380016651.01.T01:five_prime_UTR
AGCTTGCCCATGGAGGCAGA+GGG 0.639574 3:-86143863 MsG0380016651.01.T01:CDS
ACACACCTCGAAATTCAGAA+TGG 0.647364 3:+86143739 None:intergenic
CCATCATCAAGTGACAGACG+TGG 0.656324 3:-86143840 MsG0380016651.01.T01:CDS
TAGGTGGAGCTTGCCCATGG+AGG 0.659359 3:-86143870 MsG0380016651.01.T01:CDS
AGTGACAGACGTGGGTATGG+TGG 0.681415 3:-86143831 MsG0380016651.01.T01:CDS
GATGCTGAAGATGCAATTCG+GGG 0.704956 3:-86144001 MsG0380016651.01.T01:CDS
CATCATCAAGTGACAGACGT+GGG 0.724844 3:-86143839 MsG0380016651.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTATTAATATTTTTA+TGG - Chr3:86143962-86143981 MsG0380016651.01.T01:intron 0.0%
!! GTTAAATCAATATATATTAA+AGG - Chr3:86145312-86145331 MsG0380016651.01.T01:intron 10.0%
!!! GTGATAATATTTTTTTTTAA+TGG - Chr3:86144595-86144614 MsG0380016651.01.T01:intron 10.0%
!!! TGGTTATTTTTTTAAATAAT+TGG - Chr3:86141723-86141742 MsG0380016651.01.T01:intron 10.0%
!!! TTTAATTTTTGTTTAATTAC+TGG - Chr3:86142339-86142358 MsG0380016651.01.T01:intron 10.0%
!! AAAATATGTTAGAAAACATA+TGG + Chr3:86144426-86144445 None:intergenic 15.0%
!! ATTAATTTAATACAAAACAG+AGG + Chr3:86143947-86143966 None:intergenic 15.0%
!! ATTGTAAAAAAATTCAAACT+TGG + Chr3:86141053-86141072 None:intergenic 15.0%
!! CTAGTTTAATCAATAAAAAA+GGG - Chr3:86141501-86141520 MsG0380016651.01.T01:intron 15.0%
!! TAGTTTAATCAATAAAAAAG+GGG - Chr3:86141502-86141521 MsG0380016651.01.T01:intron 15.0%
!!! AGTTGATTTGAATTATTTAA+TGG - Chr3:86145694-86145713 MsG0380016651.01.T01:intron 15.0%
!!! ATTAAAATTTTCTGTCAAAA+AGG - Chr3:86143332-86143351 MsG0380016651.01.T01:intron 15.0%
!!! ATTTCCTTATTTTTTTTTAC+CGG - Chr3:86145475-86145494 MsG0380016651.01.T01:intron 15.0%
!!! TGCATTTTTATTTTTCATTT+AGG - Chr3:86143255-86143274 MsG0380016651.01.T01:intron 15.0%
!! AAAAAAAGACTAAGATACTA+TGG + Chr3:86143581-86143600 None:intergenic 20.0%
!! AAACCAAATATTAAAACTGT+AGG + Chr3:86143726-86143745 None:intergenic 20.0%
!! AAACGAATATCGTATAAATT+TGG + Chr3:86144392-86144411 None:intergenic 20.0%
!! AACAAATATGCAAAAGAAAT+AGG + Chr3:86145540-86145559 None:intergenic 20.0%
!! AACGAATATCGTATAAATTT+GGG + Chr3:86144391-86144410 None:intergenic 20.0%
!! AATATAGAAAAGGTAAAAAG+CGG + Chr3:86143850-86143869 None:intergenic 20.0%
!! AATTAAAATTTAAGGAGTAG+GGG + Chr3:86140944-86140963 None:intergenic 20.0%
!! AGTGTGTATAAAATCAATAA+GGG - Chr3:86141393-86141412 MsG0380016651.01.T01:intron 20.0%
!! AGTTTAATCAATAAAAAAGG+GGG - Chr3:86141503-86141522 MsG0380016651.01.T01:intron 20.0%
!! ATAAGTATGTCTAAACTAAA+AGG + Chr3:86144946-86144965 None:intergenic 20.0%
!! ATGATAAACATGATATTAGT+CGG + Chr3:86143299-86143318 None:intergenic 20.0%
!! CAACAACATAAATATAGAAA+AGG + Chr3:86143860-86143879 None:intergenic 20.0%
!! GAATTAAAATTTAAGGAGTA+GGG + Chr3:86140945-86140964 None:intergenic 20.0%
!! GTATATAAAGTTATTAGACA+TGG - Chr3:86145086-86145105 MsG0380016651.01.T01:five_prime_UTR 20.0%
!! TAGTGTGTATAAAATCAATA+AGG - Chr3:86141392-86141411 MsG0380016651.01.T01:intron 20.0%
!! TATAAATGTTATTACAGATC+TGG + Chr3:86144521-86144540 None:intergenic 20.0%
!! TCAATAATAACTAAGACATA+CGG + Chr3:86141176-86141195 None:intergenic 20.0%
!! TCTATATTTATGTTGTTGTA+TGG - Chr3:86143862-86143881 MsG0380016651.01.T01:CDS 20.0%
!! TGAATTAAAATTTAAGGAGT+AGG + Chr3:86140946-86140965 None:intergenic 20.0%
!! TTGTAACCAAATAAAAAACA+TGG - Chr3:86143229-86143248 MsG0380016651.01.T01:intron 20.0%
!! TTTCAATATTGTTATAGCTT+TGG - Chr3:86141816-86141835 MsG0380016651.01.T01:intron 20.0%
!!! AAAAAAGGTATTTTTAGCAA+AGG - Chr3:86146072-86146091 MsG0380016651.01.T01:five_prime_UTR 20.0%
!!! ATTAATATTTTTATGGCTTG+AGG - Chr3:86143969-86143988 MsG0380016651.01.T01:CDS 20.0%
!!! GCTAGTTTAATCAATAAAAA+AGG - Chr3:86141500-86141519 MsG0380016651.01.T01:intron 20.0%
!!! TAGTAATTTACACAAGTTTT+AGG - Chr3:86145505-86145524 MsG0380016651.01.T01:intron 20.0%
!!! TATTTTCTTTTTCACAGATT+CGG - Chr3:86144440-86144459 MsG0380016651.01.T01:intron 20.0%
!!! TTTAATGGATAATTATGTAC+CGG - Chr3:86145709-86145728 MsG0380016651.01.T01:intron 20.0%
!!! TTTATTGGTTTTTATCAGTT+TGG - Chr3:86145738-86145757 MsG0380016651.01.T01:intron 20.0%
! AAAAACCAATAAAACAACTC+CGG + Chr3:86145731-86145750 None:intergenic 25.0%
! AAATTTGATCTCATTTCCAT+CGG - Chr3:86141021-86141040 MsG0380016651.01.T01:three_prime_UTR 25.0%
! ACAATTCAAGTGCATAAAAA+TGG + Chr3:86145139-86145158 None:intergenic 25.0%
! ACATGAAAACAAGAAAAGTA+CGG + Chr3:86142171-86142190 None:intergenic 25.0%
! ATTGATTAAACTAGCACTAA+TGG + Chr3:86141495-86141514 None:intergenic 25.0%
! CAAATGCTAATGGTATTTAT+AGG + Chr3:86145879-86145898 None:intergenic 25.0%
! CAGTTCTTCTACAAAAAAAA+TGG + Chr3:86142032-86142051 None:intergenic 25.0%
! CATAATTAGTGTAATCAACA+AGG + Chr3:86144324-86144343 None:intergenic 25.0%
! CTATAAATACCATTAGCATT+TGG - Chr3:86145877-86145896 MsG0380016651.01.T01:intron 25.0%
! CTTCAATAATTATTGCTGAT+TGG + Chr3:86143520-86143539 None:intergenic 25.0%
! GATTTGTGAATTGTATACAT+GGG - Chr3:86141297-86141316 MsG0380016651.01.T01:intron 25.0%
! GCACAAAAATATAATGCAAA+AGG + Chr3:86144241-86144260 None:intergenic 25.0%
! GTCTAATAACTTTATATACC+TGG + Chr3:86145085-86145104 None:intergenic 25.0%
! GTCTATTAAACATGAATGTT+GGG - Chr3:86145817-86145836 MsG0380016651.01.T01:intron 25.0%
! GTGTGTATAAAATCAATAAG+GGG - Chr3:86141394-86141413 MsG0380016651.01.T01:intron 25.0%
! TAATCTAGTAGTGAGAAAAA+GGG + Chr3:86142845-86142864 None:intergenic 25.0%
! TATCTTATATGTAGCTTCAA+GGG - Chr3:86142633-86142652 MsG0380016651.01.T01:intron 25.0%
! TATTCATTTATTGTCTGAGA+GGG - Chr3:86144546-86144565 MsG0380016651.01.T01:intron 25.0%
! TCAATTCAATTTCCATTATG+CGG + Chr3:86142736-86142755 None:intergenic 25.0%
! TGAAAGATAATCTCCAATTT+AGG - Chr3:86141193-86141212 MsG0380016651.01.T01:three_prime_UTR 25.0%
! TGAATTGTTTATCCAATTAC+AGG - Chr3:86145151-86145170 MsG0380016651.01.T01:intron 25.0%
! TGATAACAGTTAATGAGAAA+AGG - Chr3:86142422-86142441 MsG0380016651.01.T01:CDS 25.0%
! TGATTATAGTTAGATGTTTC+AGG - Chr3:86141957-86141976 MsG0380016651.01.T01:intron 25.0%
! TGTCTATTAAACATGAATGT+TGG - Chr3:86145816-86145835 MsG0380016651.01.T01:intron 25.0%
! TGTTCCGGTAAAAAAAAATA+AGG + Chr3:86145482-86145501 None:intergenic 25.0%
! TTATCTTATATGTAGCTTCA+AGG - Chr3:86142632-86142651 MsG0380016651.01.T01:intron 25.0%
! TTATTCATTTATTGTCTGAG+AGG - Chr3:86144545-86144564 MsG0380016651.01.T01:intron 25.0%
!! CATAATGGAAATTGAATTGA+AGG - Chr3:86142736-86142755 MsG0380016651.01.T01:intron 25.0%
!! CTACTAGATTACTTGTATTT+TGG - Chr3:86142854-86142873 MsG0380016651.01.T01:intron 25.0%
!! GGTATTTAAAGCTGATTATA+TGG - Chr3:86145218-86145237 MsG0380016651.01.T01:intron 25.0%
!!! AAAGCTCTCATTTTAGTTTA+GGG - Chr3:86144144-86144163 MsG0380016651.01.T01:intron 25.0%
!!! CAGTTTTAATATTTGGTTTC+AGG - Chr3:86143727-86143746 MsG0380016651.01.T01:intron 25.0%
!!! CTTTTCTTGTTTTCATGTTA+TGG - Chr3:86142173-86142192 MsG0380016651.01.T01:intron 25.0%
!!! GCAATTCCATGTTTTTTATT+TGG + Chr3:86143238-86143257 None:intergenic 25.0%
!!! TATAATCAGCTTTAAATACC+TGG + Chr3:86145218-86145237 None:intergenic 25.0%
!!! TATGGTTCAGAATTTTAATG+AGG - Chr3:86145236-86145255 MsG0380016651.01.T01:intron 25.0%
!!! TCACCTACAGTTTTAATATT+TGG - Chr3:86143720-86143739 MsG0380016651.01.T01:intron 25.0%
!!! TGTGTTTTGTTCAATTTGTT+TGG - Chr3:86142217-86142236 MsG0380016651.01.T01:intron 25.0%
!!! TTTTTTACAATTCGCAACTT+GGG - Chr3:86141062-86141081 MsG0380016651.01.T01:three_prime_UTR 25.0%
!!! TTTTTTTACAATTCGCAACT+TGG - Chr3:86141061-86141080 MsG0380016651.01.T01:three_prime_UTR 25.0%
AAAAGAATCCATGCTTCATT+AGG + Chr3:86145584-86145603 None:intergenic 30.0%
AAAATGTCTCCAAATGCTAA+TGG + Chr3:86145889-86145908 None:intergenic 30.0%
AAACAAAGACACGACAAATA+AGG + Chr3:86144682-86144701 None:intergenic 30.0%
AAACATAGGGAATATAGAGT+GGG - Chr3:86141676-86141695 MsG0380016651.01.T01:intron 30.0%
AAACATGAAGATAAGAGTCA+TGG + Chr3:86143391-86143410 None:intergenic 30.0%
AAATAAGCGTTTGTTTAGAG+TGG - Chr3:86145927-86145946 MsG0380016651.01.T01:intron 30.0%
AAATAGAGAAGTAGAAATGC+AGG + Chr3:86142322-86142341 None:intergenic 30.0%
AACAAAGACACGACAAATAA+GGG + Chr3:86144681-86144700 None:intergenic 30.0%
AAGAACAGTCTAATAAAGCA+GGG + Chr3:86145981-86146000 None:intergenic 30.0%
AATAACTTTATATACCTGGC+AGG + Chr3:86145081-86145100 None:intergenic 30.0%
AATCTCCAATTTAGGTAACT+TGG - Chr3:86141201-86141220 MsG0380016651.01.T01:three_prime_UTR 30.0%
AATTGAAGATCTGTTCTACA+AGG - Chr3:86142137-86142156 MsG0380016651.01.T01:intron 30.0%
AATTGTGATTTCCATTTGAG+GGG + Chr3:86143997-86144016 None:intergenic 30.0%
ACCTCAACAAAACAATAACA+TGG + Chr3:86142776-86142795 None:intergenic 30.0%
AGGTCAACAGAAAAAATACA+TGG + Chr3:86142526-86142545 None:intergenic 30.0%
ATAAAAAAGGGGGTAATGTT+AGG - Chr3:86141513-86141532 MsG0380016651.01.T01:intron 30.0%
ATGGCTTGATTGTGAAAAAA+AGG - Chr3:86146057-86146076 MsG0380016651.01.T01:five_prime_UTR 30.0%
ATTCAAGTGCATAAAAATGG+TGG + Chr3:86145136-86145155 None:intergenic 30.0%
ATTTCACTGTTTGTATGAGA+AGG - Chr3:86144755-86144774 MsG0380016651.01.T01:intron 30.0%
CAACAAAACAATAACATGGA+GGG + Chr3:86142772-86142791 None:intergenic 30.0%
CAATTGTGATTTCCATTTGA+GGG + Chr3:86143998-86144017 None:intergenic 30.0%
CTCAAAACCCTAATTCAAAA+CGG + Chr3:86140999-86141018 None:intergenic 30.0%
CTGAAACAATTGAGAAGAAA+AGG + Chr3:86144121-86144140 None:intergenic 30.0%
GGATTTGTGAATTGTATACA+TGG - Chr3:86141296-86141315 MsG0380016651.01.T01:intron 30.0%
GTAATCTAGTAGTGAGAAAA+AGG + Chr3:86142846-86142865 None:intergenic 30.0%
GTTCCTACTTTCTGTAATAT+TGG + Chr3:86145389-86145408 None:intergenic 30.0%
TAAAAAAGGGGGTAATGTTA+GGG - Chr3:86141514-86141533 MsG0380016651.01.T01:intron 30.0%
TAACTTGGTTGTGTATTTCA+CGG - Chr3:86141216-86141235 MsG0380016651.01.T01:three_prime_UTR 30.0%
TACAAAGCAGTTATTAAGTG+AGG - Chr3:86145429-86145448 MsG0380016651.01.T01:intron 30.0%
TACTATATCTTCCTATTGTC+TGG - Chr3:86142241-86142260 MsG0380016651.01.T01:intron 30.0%
TCAAAACCCTAATTCAAAAC+GGG + Chr3:86140998-86141017 None:intergenic 30.0%
TCAACAAAACAATAACATGG+AGG + Chr3:86142773-86142792 None:intergenic 30.0%
TCAATTGTGATTTCCATTTG+AGG + Chr3:86143999-86144018 None:intergenic 30.0%
TCACCTCAGAAAATAAAAGT+TGG + Chr3:86142976-86142995 None:intergenic 30.0%
TGTAAATTACTACTCTGTTC+CGG + Chr3:86145497-86145516 None:intergenic 30.0%
TTCTGATTCTCTTATATCAG+CGG + Chr3:86142118-86142137 None:intergenic 30.0%
TTTACTACAGTTATTGTTCG+TGG - Chr3:86143604-86143623 MsG0380016651.01.T01:intron 30.0%
TTTGTATGAGAAGGATTATC+TGG - Chr3:86144764-86144783 MsG0380016651.01.T01:intron 30.0%
! ATGGCTAACTTTCTATTTTC+TGG - Chr3:86144207-86144226 MsG0380016651.01.T01:intron 30.0%
! CAGTTAATGAGAAAAGGTTT+TGG - Chr3:86142428-86142447 MsG0380016651.01.T01:CDS 30.0%
! GTATTGTGACTTTCTGATTT+TGG - Chr3:86144901-86144920 MsG0380016651.01.T01:intron 30.0%
! TTATACGATATTCGTTTTGC+TGG - Chr3:86144395-86144414 MsG0380016651.01.T01:intron 30.0%
!! AATGTTCCCGTTTTGAATTA+GGG - Chr3:86140989-86141008 MsG0380016651.01.T01:three_prime_UTR 30.0%
!! GATTATGCTTGCTAATTTTC+TGG - Chr3:86141769-86141788 MsG0380016651.01.T01:intron 30.0%
!! TAGCTTTGTTATCTTGGATT+TGG - Chr3:86142576-86142595 MsG0380016651.01.T01:CDS 30.0%
!! TAGTTAGATGTTTCAGGTTT+AGG - Chr3:86141963-86141982 MsG0380016651.01.T01:intron 30.0%
!! TCCATGTTATTGTTTTGTTG+AGG - Chr3:86142772-86142791 MsG0380016651.01.T01:intron 30.0%
!! TTTGCTTAGCTTTGTTATCT+TGG - Chr3:86142570-86142589 MsG0380016651.01.T01:CDS 30.0%
!!! AGATTACTTGTATTTTGGCT+TGG - Chr3:86142859-86142878 MsG0380016651.01.T01:intron 30.0%
!!! CAAAGCTCTCATTTTAGTTT+AGG - Chr3:86144143-86144162 MsG0380016651.01.T01:intron 30.0%
!!! CTTTCTATTTTCTGGAGTAT+TGG - Chr3:86144215-86144234 MsG0380016651.01.T01:intron 30.0%
!!! GTTCCAACTTTTATTTTCTG+AGG - Chr3:86142970-86142989 MsG0380016651.01.T01:intron 30.0%
!!! GTTTACTGGCTTTTACTAAT+CGG + Chr3:86142387-86142406 None:intergenic 30.0%
AACTTGGTTGTGTATTTCAC+GGG - Chr3:86141217-86141236 MsG0380016651.01.T01:three_prime_UTR 35.0%
AAGATAAGAGTCATGGACAA+TGG + Chr3:86143384-86143403 None:intergenic 35.0%
AAGTGAAAACATGATTGCGA+AGG + Chr3:86145361-86145380 None:intergenic 35.0%
ACAGAAAAAATACATGGCTG+TGG + Chr3:86142520-86142539 None:intergenic 35.0%
AGAAGAAAAGGTCTACATGT+CGG + Chr3:86144109-86144128 None:intergenic 35.0%
AGGGGTAATGTTTATACTTG+AGG - Chr3:86141412-86141431 MsG0380016651.01.T01:intron 35.0%
AGTTATTTACGCCACTCATA+TGG + Chr3:86143910-86143929 None:intergenic 35.0%
ATAGACAGAGAAGACCAAAA+TGG + Chr3:86145803-86145822 None:intergenic 35.0%
ATAGGTACCTTGTGTTGAAA+AGG + Chr3:86145861-86145880 None:intergenic 35.0%
ATCAGTTTGGTTACTCTGTA+GGG - Chr3:86145751-86145770 MsG0380016651.01.T01:intron 35.0%
ATGAGTGGCGTAAATAACTT+GGG - Chr3:86143911-86143930 MsG0380016651.01.T01:intron 35.0%
ATGTCTACTAACATGGTCAT+TGG + Chr3:86144075-86144094 None:intergenic 35.0%
ATTAAGTGAGGATGAACATC+TGG - Chr3:86145441-86145460 MsG0380016651.01.T01:intron 35.0%
ATTCAGTTCAAAACTCCCAA+TGG + Chr3:86142281-86142300 None:intergenic 35.0%
CAAACATAGGGAATATAGAG+TGG - Chr3:86141675-86141694 MsG0380016651.01.T01:intron 35.0%
CAAGAACAGTCTAATAAAGC+AGG + Chr3:86145982-86146001 None:intergenic 35.0%
CACAACCAAGTTACCTAAAT+TGG + Chr3:86141209-86141228 None:intergenic 35.0%
CAGAAAAAATACATGGCTGT+GGG + Chr3:86142519-86142538 None:intergenic 35.0%
CCATACTGTTAAGAGGATAA+TGG + Chr3:86142713-86142732 None:intergenic 35.0%
CCATTATCCTCTTAACAGTA+TGG - Chr3:86142710-86142729 MsG0380016651.01.T01:intron 35.0%
CGAAGGTAAATGTCAAATAC+AGG + Chr3:86145344-86145363 None:intergenic 35.0%
CTGAACTCAATCATGTTTAC+TGG + Chr3:86142401-86142420 None:intergenic 35.0%
GAGCCAATATTACAGAAAGT+AGG - Chr3:86145383-86145402 MsG0380016651.01.T01:intron 35.0%
GATATTAGTCGGAGCTTAAT+GGG + Chr3:86143288-86143307 None:intergenic 35.0%
GCAAAAGTTTGTAAGATCTG+CGG + Chr3:86144640-86144659 None:intergenic 35.0%
TAAAGCTCCTGCATTATTCT+GGG - Chr3:86145653-86145672 MsG0380016651.01.T01:intron 35.0%
TAATTCAGATTGTGAGGTGA+GGG - Chr3:86141320-86141339 MsG0380016651.01.T01:intron 35.0%
TACAGTCCATTCAAAGGAAA+AGG + Chr3:86142549-86142568 None:intergenic 35.0%
TATCAGTTTGGTTACTCTGT+AGG - Chr3:86145750-86145769 MsG0380016651.01.T01:intron 35.0%
TATGAGTGGCGTAAATAACT+TGG - Chr3:86143910-86143929 MsG0380016651.01.T01:intron 35.0%
TCTCTTCTATACTTCTGTCT+TGG - Chr3:86142807-86142826 MsG0380016651.01.T01:intron 35.0%
TCTGATTCTCTTATATCAGC+GGG + Chr3:86142117-86142136 None:intergenic 35.0%
TGATATTAGTCGGAGCTTAA+TGG + Chr3:86143289-86143308 None:intergenic 35.0%
TTAAGTGAGGATGAACATCT+GGG - Chr3:86145442-86145461 MsG0380016651.01.T01:intron 35.0%
TTCATTCTGCAGTAGATCTT+TGG - Chr3:86144984-86145003 MsG0380016651.01.T01:intron 35.0%
! ACTTTGATGGTTGTCGATTA+AGG - Chr3:86142937-86142956 MsG0380016651.01.T01:intron 35.0%
! CTATTGTCCTTTTCAACACA+AGG - Chr3:86145851-86145870 MsG0380016651.01.T01:intron 35.0%
! CTTTGATGGTTGTCGATTAA+GGG - Chr3:86142938-86142957 MsG0380016651.01.T01:intron 35.0%
! GAGCTTTGCTATCAAACATA+GGG - Chr3:86141663-86141682 MsG0380016651.01.T01:intron 35.0%
! TATTTTCTGCTCCATATGAG+TGG - Chr3:86143896-86143915 MsG0380016651.01.T01:intron 35.0%
! TCTGAGGTGAAAACTTTCTT+CGG - Chr3:86142986-86143005 MsG0380016651.01.T01:intron 35.0%
! TGAGCTTTGCTATCAAACAT+AGG - Chr3:86141662-86141681 MsG0380016651.01.T01:intron 35.0%
! TTTTCTCGCACAATCTATGT+TGG - Chr3:86142084-86142103 MsG0380016651.01.T01:intron 35.0%
! TTTTTCACAGATTCGGAAAC+TGG - Chr3:86144447-86144466 MsG0380016651.01.T01:intron 35.0%
!! AAGGGTAATGGTTCTAGTTA+AGG - Chr3:86141275-86141294 MsG0380016651.01.T01:CDS 35.0%
!! ATGTACCGGAGTTGTTTTAT+TGG - Chr3:86145723-86145742 MsG0380016651.01.T01:intron 35.0%
!! CGTTTTGAATTAGGGTTTTG+AGG - Chr3:86140997-86141016 MsG0380016651.01.T01:three_prime_UTR 35.0%
!! GAATGTTCCCGTTTTGAATT+AGG - Chr3:86140988-86141007 MsG0380016651.01.T01:three_prime_UTR 35.0%
!! GTGAAGGTACACATTCATTT+TGG - Chr3:86143801-86143820 MsG0380016651.01.T01:CDS 35.0%
!! TAGGGTTTGATTTGTCAAAG+CGG - Chr3:86141532-86141551 MsG0380016651.01.T01:intron 35.0%
!! TGCTTGCTAATTTTCTGGAA+AGG - Chr3:86141774-86141793 MsG0380016651.01.T01:intron 35.0%
!! TTATAGCTTTGGAGCATCTT+TGG - Chr3:86141827-86141846 MsG0380016651.01.T01:intron 35.0%
!!! AAGCATGGATTCTTTTTTGC+AGG - Chr3:86145588-86145607 MsG0380016651.01.T01:intron 35.0%
!!! ATACTGCTCTTTTTTGCTCA+GGG - Chr3:86144290-86144309 MsG0380016651.01.T01:intron 35.0%
!!! CTTGGTTTGCTTCATAGTTT+TGG - Chr3:86141898-86141917 MsG0380016651.01.T01:intron 35.0%
AATAACAAACAACGTGGGTC+AGG + Chr3:86141093-86141112 None:intergenic 40.0%
AATGTGTACCTTCACTGTCA+CGG + Chr3:86143796-86143815 None:intergenic 40.0%
ACAAGCGATGTCTACTAACA+TGG + Chr3:86144082-86144101 None:intergenic 40.0%
ACACACCTCGAAATTCAGAA+TGG + Chr3:86143165-86143184 None:intergenic 40.0%
ACACCGAGTTTAGAAATCCT+TGG - Chr3:86144473-86144492 MsG0380016651.01.T01:intron 40.0%
ACCTACAACAAGAGCAGATT+AGG + Chr3:86143016-86143035 None:intergenic 40.0%
ACTTGGTTGTGTATTTCACG+GGG - Chr3:86141218-86141237 MsG0380016651.01.T01:three_prime_UTR 40.0%
AGAAGCTGGTAAAAGGGTAA+TGG - Chr3:86141263-86141282 MsG0380016651.01.T01:exon 40.0%
AGATGCTGAAGATGCAATTC+GGG - Chr3:86142899-86142918 MsG0380016651.01.T01:intron 40.0%
AGTCCATTCAAAGGAAAAGG+AGG + Chr3:86142546-86142565 None:intergenic 40.0%
AGTTTAGGGACTAAGTCTGT+GGG - Chr3:86144158-86144177 MsG0380016651.01.T01:intron 40.0%
ATGAATGTTGGGTATTTGCC+TGG - Chr3:86145828-86145847 MsG0380016651.01.T01:intron 40.0%
ATGTTCGTCCTAATGAAGCA+TGG - Chr3:86145573-86145592 MsG0380016651.01.T01:intron 40.0%
ATTTCGAGGTGTGTCTATTC+AGG - Chr3:86143171-86143190 MsG0380016651.01.T01:intron 40.0%
CAAAACTCCCAATGGTGTAA+AGG + Chr3:86142273-86142292 None:intergenic 40.0%
CAAGCGACAGCTATAACTAA+GGG + Chr3:86142608-86142627 None:intergenic 40.0%
CACCCAATAACAAACAACGT+GGG + Chr3:86141098-86141117 None:intergenic 40.0%
CACCGAGTTTAGAAATCCTT+GGG - Chr3:86144474-86144493 MsG0380016651.01.T01:intron 40.0%
CAGAAAGTCACAATACCTTC+TGG + Chr3:86144897-86144916 None:intergenic 40.0%
CATGGGTAATTCAGATTGTG+AGG - Chr3:86141314-86141333 MsG0380016651.01.T01:intron 40.0%
CCAATATCCCAGAATAATGC+AGG + Chr3:86145663-86145682 None:intergenic 40.0%
CGTGATGGTTACAACTTTGA+TGG - Chr3:86142924-86142943 MsG0380016651.01.T01:intron 40.0%
CTAAAGCTCCTGCATTATTC+TGG - Chr3:86145652-86145671 MsG0380016651.01.T01:intron 40.0%
CTAACGCAGTCATGTTTCAA+TGG - Chr3:86142683-86142702 MsG0380016651.01.T01:intron 40.0%
CTTGGGCGAGATCATATATT+CGG - Chr3:86144491-86144510 MsG0380016651.01.T01:intron 40.0%
GAGATGCTGAAGATGCAATT+CGG - Chr3:86142898-86142917 MsG0380016651.01.T01:intron 40.0%
GCAAAAAAGAGCAGTATGAG+TGG + Chr3:86144287-86144306 None:intergenic 40.0%
GCAAACTACAGTCCATTCAA+AGG + Chr3:86142555-86142574 None:intergenic 40.0%
GGTTAAAAGAGAGATGCGTA+AGG - Chr3:86141553-86141572 MsG0380016651.01.T01:intron 40.0%
GTAATTCAGATTGTGAGGTG+AGG - Chr3:86141319-86141338 MsG0380016651.01.T01:intron 40.0%
GTAGGGGATGATTCTATGTA+CGG + Chr3:86140928-86140947 None:intergenic 40.0%
TACTCTTGATGCTGTTCTCA+TGG - Chr3:86146038-86146057 MsG0380016651.01.T01:five_prime_UTR 40.0%
TAGTTTAGGGACTAAGTCTG+TGG - Chr3:86144157-86144176 MsG0380016651.01.T01:intron 40.0%
TATGATAGATGACAAGCGCT+TGG - Chr3:86141632-86141651 MsG0380016651.01.T01:intron 40.0%
TCAAGCGACAGCTATAACTA+AGG + Chr3:86142609-86142628 None:intergenic 40.0%
TGCTCAAGCTGTAATCTTTC+TGG - Chr3:86140898-86140917 MsG0380016651.01.T01:three_prime_UTR 40.0%
TGTAGTACCAGTACTTGTCT+CGG - Chr3:86141351-86141370 MsG0380016651.01.T01:intron 40.0%
TGTTGAAAAGGACAATAGCC+AGG + Chr3:86145849-86145868 None:intergenic 40.0%
TTAACAGTATGGCCGCATAA+TGG - Chr3:86142721-86142740 MsG0380016651.01.T01:intron 40.0%
TTATTGTCCGAGACAAGTAC+TGG + Chr3:86141361-86141380 None:intergenic 40.0%
TTGGGCGAGATCATATATTC+GGG - Chr3:86144492-86144511 MsG0380016651.01.T01:intron 40.0%
TTTCGAGGTGTGTCTATTCA+GGG - Chr3:86143172-86143191 MsG0380016651.01.T01:intron 40.0%
! AAGCGTTTGTTTAGAGTGGT+TGG - Chr3:86145931-86145950 MsG0380016651.01.T01:intron 40.0%
! ACGATATTCGTTTTGCTGGA+AGG - Chr3:86144399-86144418 MsG0380016651.01.T01:intron 40.0%
! ATGGTTGTCGATTAAGGGTA+TGG - Chr3:86142943-86142962 MsG0380016651.01.T01:intron 40.0%
! CGATATTCGTTTTGCTGGAA+GGG - Chr3:86144400-86144419 MsG0380016651.01.T01:intron 40.0%
! TAATCTGCTCTTGTTGTAGG+TGG - Chr3:86143015-86143034 MsG0380016651.01.T01:intron 40.0%
! TGACCTCCTTTTCCTTTGAA+TGG - Chr3:86142540-86142559 MsG0380016651.01.T01:intron 40.0%
! TGGTTGTCGATTAAGGGTAT+GGG - Chr3:86142944-86142963 MsG0380016651.01.T01:intron 40.0%
! TGTCACTTGATGTTTGAGTG+CGG - Chr3:86144728-86144747 MsG0380016651.01.T01:intron 40.0%
!! AGATGTTTCAGGTTTAGGTG+CGG - Chr3:86141968-86141987 MsG0380016651.01.T01:intron 40.0%
!! AGCTTAGCCTTGTTACCAAT+GGG - Chr3:86141453-86141472 MsG0380016651.01.T01:intron 40.0%
!! CCTGCATTATTCTGGGATAT+TGG - Chr3:86145660-86145679 MsG0380016651.01.T01:intron 40.0%
!! CTAATTTTCTGGAAAGGCTG+AGG - Chr3:86141780-86141799 MsG0380016651.01.T01:intron 40.0%
!! GACCCACGTTGTTTGTTATT+GGG - Chr3:86141093-86141112 MsG0380016651.01.T01:three_prime_UTR 40.0%
!! TCTTTGGAGCAAATGAGCAA+TGG - Chr3:86141843-86141862 MsG0380016651.01.T01:intron 40.0%
!! TGACCCACGTTGTTTGTTAT+TGG - Chr3:86141092-86141111 MsG0380016651.01.T01:three_prime_UTR 40.0%
!!! CATACTGCTCTTTTTTGCTC+AGG - Chr3:86144289-86144308 MsG0380016651.01.T01:intron 40.0%
!!! CTTTTTTGCTCAGGGACTTT+TGG - Chr3:86144298-86144317 MsG0380016651.01.T01:intron 40.0%
!!! TAGACTTGCTGCTACCATTT+TGG - Chr3:86145786-86145805 MsG0380016651.01.T01:intron 40.0%
!!! TCTTTTTTGCAGGTTCTGTC+TGG - Chr3:86145598-86145617 MsG0380016651.01.T01:intron 40.0%
AAACAATAACATGGAGGGCG+AGG + Chr3:86142767-86142786 None:intergenic 45.0%
AACTCCCAATGGTGTAAAGG+TGG + Chr3:86142270-86142289 None:intergenic 45.0%
AATGGCGAGAGACACCAAAA+CGG + Chr3:86143147-86143166 None:intergenic 45.0%
ACTCCCAATGGTGTAAAGGT+GGG + Chr3:86142269-86142288 None:intergenic 45.0%
ACTTCAGTTTCGCTGCGATT+GGG - Chr3:86140875-86140894 MsG0380016651.01.T01:three_prime_UTR 45.0%
AGCTTCAAGGGTCAATGTGT+GGG - Chr3:86142645-86142664 MsG0380016651.01.T01:intron 45.0%
AGGGAATATAGAGTGGGAGT+GGG - Chr3:86141682-86141701 MsG0380016651.01.T01:intron 45.0%
AGGTCGAAGAAGCTGGTAAA+AGG - Chr3:86141256-86141275 MsG0380016651.01.T01:exon 45.0%
AGTATGAGAGCAGTCGTTCA+AGG - Chr3:86144828-86144847 MsG0380016651.01.T01:CDS 45.0%
ATATACCTGGCAGGCTTGAT+TGG + Chr3:86145072-86145091 None:intergenic 45.0%
ATGTGTACCTTCACTGTCAC+GGG + Chr3:86143795-86143814 None:intergenic 45.0%
ATTCTCTTATATCAGCGGGC+AGG + Chr3:86142113-86142132 None:intergenic 45.0%
CAATGGGGACGGTTGTAATA+TGG - Chr3:86141469-86141488 MsG0380016651.01.T01:intron 45.0%
CAGGATCATATGCGAAAAGC+TGG - Chr3:86143746-86143765 MsG0380016651.01.T01:CDS 45.0%
CATATTACAACCGTCCCCAT+TGG + Chr3:86141471-86141490 None:intergenic 45.0%
CATCATCAAGTGACAGACGT+GGG - Chr3:86143062-86143081 MsG0380016651.01.T01:intron 45.0%
CGAATATATGATCTCGCCCA+AGG + Chr3:86144493-86144512 None:intergenic 45.0%
CGCCCAAGGATTTCTAAACT+CGG + Chr3:86144479-86144498 None:intergenic 45.0%
CTCTTCAAGGATTGCTCTCT+TGG - Chr3:86141880-86141899 MsG0380016651.01.T01:intron 45.0%
GAACCCACCTTTACACCATT+GGG - Chr3:86142263-86142282 MsG0380016651.01.T01:intron 45.0%
GATGCTGAAGATGCAATTCG+GGG - Chr3:86142900-86142919 MsG0380016651.01.T01:intron 45.0%
GATTCTTCCTCACTCTCAGA+AGG - Chr3:86141747-86141766 MsG0380016651.01.T01:intron 45.0%
GCACCCAATAACAAACAACG+TGG + Chr3:86141099-86141118 None:intergenic 45.0%
GGTCGAAGAAGCTGGTAAAA+GGG - Chr3:86141257-86141276 MsG0380016651.01.T01:exon 45.0%
GTCACTTGATGTTTGAGTGC+GGG - Chr3:86144729-86144748 MsG0380016651.01.T01:intron 45.0%
GTTTAGGGACTAAGTCTGTG+GGG - Chr3:86144159-86144178 MsG0380016651.01.T01:intron 45.0%
TAGCTTCAAGGGTCAATGTG+TGG - Chr3:86142644-86142663 MsG0380016651.01.T01:intron 45.0%
TAGGGAATATAGAGTGGGAG+TGG - Chr3:86141681-86141700 MsG0380016651.01.T01:intron 45.0%
TATGCGGCCATACTGTTAAG+AGG + Chr3:86142720-86142739 None:intergenic 45.0%
TCTCGCCATTCTGAATTTCG+AGG - Chr3:86143157-86143176 MsG0380016651.01.T01:intron 45.0%
TGATACCTTCAAATCCTGCC+AGG + Chr3:86143647-86143666 None:intergenic 45.0%
TGGTGATCTTGGCCTGTAAT+TGG + Chr3:86145166-86145185 None:intergenic 45.0%
! AAAGGTGGGTTCCAGACAAT+AGG + Chr3:86142255-86142274 None:intergenic 45.0%
! AATAACCCTGTGGTGTCAGA+TGG - Chr3:86144188-86144207 MsG0380016651.01.T01:intron 45.0%
! CAATACCTTCTGGCCCTTTT+CGG + Chr3:86144887-86144906 None:intergenic 45.0%
! GCATAATCCTTCTGAGAGTG+AGG + Chr3:86141757-86141776 None:intergenic 45.0%
! GCCTAATCTGCTCTTGTTGT+AGG - Chr3:86143012-86143031 MsG0380016651.01.T01:intron 45.0%
!! CTTGATTGGTGATGCTGATC+TGG + Chr3:86145058-86145077 None:intergenic 45.0%
!! GAGCTTAGCCTTGTTACCAA+TGG - Chr3:86141452-86141471 MsG0380016651.01.T01:intron 45.0%
!! GCTTAGCCTTGTTACCAATG+GGG - Chr3:86141454-86141473 MsG0380016651.01.T01:intron 45.0%
!! TCAGCTTTAAATACCTGGCG+TGG + Chr3:86145213-86145232 None:intergenic 45.0%
!! ATAAATTGAATTAAAATTTA+AGG + Chr3:86140952-86140971 None:intergenic 5.0%
!!! TTTAATATATATTGATTTAA+CGG + Chr3:86145313-86145332 None:intergenic 5.0%
!!! TTTTTCATAATAATAAATAA+TGG - Chr3:86145261-86145280 MsG0380016651.01.T01:intron 5.0%
AACATGATCAGCCCCACAAC+TGG - Chr3:86144031-86144050 MsG0380016651.01.T01:intron 50.0%
AATGCCAGACTGACCAGTTG+TGG + Chr3:86144047-86144066 None:intergenic 50.0%
ACAACTGGTCAGTCTGGCAT+TGG - Chr3:86144046-86144065 MsG0380016651.01.T01:intron 50.0%
AGCGAAACTGAAGTCGAAGC+TGG + Chr3:86140869-86140888 None:intergenic 50.0%
AGCGATCTGTGTCTAGGTCA+CGG - Chr3:86145007-86145026 MsG0380016651.01.T01:intron 50.0%
AGTTAGCCATCTGACACCAC+AGG + Chr3:86144197-86144216 None:intergenic 50.0%
ATGAGCAATGGAGTGGAGCA+CGG - Chr3:86141855-86141874 MsG0380016651.01.T01:intron 50.0%
ATGCCAGACTGACCAGTTGT+GGG + Chr3:86144046-86144065 None:intergenic 50.0%
CAGGAGCAGAAGTCCGAAAA+GGG - Chr3:86144871-86144890 MsG0380016651.01.T01:intron 50.0%
CCATCATCAAGTGACAGACG+TGG - Chr3:86143061-86143080 MsG0380016651.01.T01:intron 50.0%
CTCTCTCTCTCGAATTCGCA+GGG - Chr3:86140835-86140854 MsG0380016651.01.T01:three_prime_UTR 50.0%
CTGACACCACAGGGTTATTC+TGG + Chr3:86144187-86144206 None:intergenic 50.0%
GAAGTTTCCCGTGACAGTGA+AGG - Chr3:86143785-86143804 MsG0380016651.01.T01:CDS 50.0%
GACTTCAGTTTCGCTGCGAT+TGG - Chr3:86140874-86140893 MsG0380016651.01.T01:three_prime_UTR 50.0%
GCTTCAAGGGTCAATGTGTG+GGG - Chr3:86142646-86142665 MsG0380016651.01.T01:intron 50.0%
GGAACCCACCTTTACACCAT+TGG - Chr3:86142262-86142281 MsG0380016651.01.T01:intron 50.0%
GGAGCAAATGAGCAATGGAG+TGG - Chr3:86141848-86141867 MsG0380016651.01.T01:intron 50.0%
GTTAGCCATCTGACACCACA+GGG + Chr3:86144196-86144215 None:intergenic 50.0%
TAGAGTGGGAGTGGGAGAAT+CGG - Chr3:86141690-86141709 MsG0380016651.01.T01:intron 50.0%
TCAAACTTGGAGCTCACCGA+TGG + Chr3:86141040-86141059 None:intergenic 50.0%
TCAAGTGACAGACGTGGGTA+TGG - Chr3:86143067-86143086 MsG0380016651.01.T01:intron 50.0%
TCTCTCTCTCTCGAATTCGC+AGG - Chr3:86140834-86140853 MsG0380016651.01.T01:three_prime_UTR 50.0%
TCTGGATCTGGATCTGGATC+TGG + Chr3:86145040-86145059 None:intergenic 50.0%
TGCATCCTGGCAGGATTTGA+AGG - Chr3:86143639-86143658 MsG0380016651.01.T01:intron 50.0%
TGCTGATCTGGATCTGGATC+TGG + Chr3:86145046-86145065 None:intergenic 50.0%
TTGCAGGTTCTGTCTGGTAG+CGG - Chr3:86145604-86145623 MsG0380016651.01.T01:intron 50.0%
! AACCGTCCCCATTGGTAACA+AGG + Chr3:86141463-86141482 None:intergenic 50.0%
! CCACGTCTGTCACTTGATGA+TGG + Chr3:86143064-86143083 None:intergenic 50.0%
! GCTGAACGTGATGGTGATCT+TGG + Chr3:86145177-86145196 None:intergenic 50.0%
! TACTTGAGGCGTTAGCTCAG+TGG - Chr3:86141426-86141445 MsG0380016651.01.T01:intron 50.0%
! TGGTGATGCTGATCTGGATC+TGG + Chr3:86145052-86145071 None:intergenic 50.0%
!! AGCCTTGTTACCAATGGGGA+CGG - Chr3:86141458-86141477 MsG0380016651.01.T01:intron 50.0%
!! CTTTGGAGCGATCTGTGTCT+AGG - Chr3:86145001-86145020 MsG0380016651.01.T01:intron 50.0%
AATACCTGGCGTGGTGATCG+TGG + Chr3:86145204-86145223 None:intergenic 55.0%
AGAGTGGGAGTGGGAGAATC+GGG - Chr3:86141691-86141710 MsG0380016651.01.T01:intron 55.0%
AGTGACAGACGTGGGTATGG+TGG - Chr3:86143070-86143089 MsG0380016651.01.T01:intron 55.0%
CAATAACATGGAGGGCGAGG+AGG + Chr3:86142764-86142783 None:intergenic 55.0%
CATCACCAATCAAGCCTGCC+AGG - Chr3:86145064-86145083 MsG0380016651.01.T01:five_prime_UTR 55.0%
CCTGCCAGGATGCAGAAGAT+GGG + Chr3:86143633-86143652 None:intergenic 55.0%
CGGGGTGAAATCTGCATACG+AGG - Chr3:86141236-86141255 MsG0380016651.01.T01:three_prime_UTR 55.0%
GAAGTCCGAAAAGGGCCAGA+AGG - Chr3:86144879-86144898 MsG0380016651.01.T01:intron 55.0%
GACTCCCATCTTCTGCATCC+TGG - Chr3:86143626-86143645 MsG0380016651.01.T01:intron 55.0%
GATGCAATTCGGGGTCGTGA+TGG - Chr3:86142909-86142928 MsG0380016651.01.T01:intron 55.0%
GCAGGAGCAGAAGTCCGAAA+AGG - Chr3:86144870-86144889 MsG0380016651.01.T01:intron 55.0%
GCATACGAGGTCGAAGAAGC+TGG - Chr3:86141249-86141268 MsG0380016651.01.T01:exon 55.0%
TCCTGCCAGGATGCAGAAGA+TGG + Chr3:86143634-86143653 None:intergenic 55.0%
TGCCAGACTGACCAGTTGTG+GGG + Chr3:86144045-86144064 None:intergenic 55.0%
TTCGGACTTCTGCTCCTGCT+GGG + Chr3:86144869-86144888 None:intergenic 55.0%
TTGTAGGTGGAGCTTGCCCA+TGG - Chr3:86143028-86143047 MsG0380016651.01.T01:intron 55.0%
TTTCGGACTTCTGCTCCTGC+TGG + Chr3:86144870-86144889 None:intergenic 55.0%
! GGGGTACCAGAATAACCCTG+TGG - Chr3:86144178-86144197 MsG0380016651.01.T01:intron 55.0%
AGCCCCACAACTGGTCAGTC+TGG - Chr3:86144040-86144059 MsG0380016651.01.T01:intron 60.0%
AGCTTGCCCATGGAGGCAGA+GGG - Chr3:86143038-86143057 MsG0380016651.01.T01:intron 60.0%
ATGATGGCCCTCTGCCTCCA+TGG + Chr3:86143048-86143067 None:intergenic 60.0%
CCCATCTTCTGCATCCTGGC+AGG - Chr3:86143630-86143649 MsG0380016651.01.T01:intron 60.0%
CGTGGAGACGCTGAACGTGA+TGG + Chr3:86145186-86145205 None:intergenic 60.0%
GACAGACGTGGGTATGGTGG+TGG - Chr3:86143073-86143092 MsG0380016651.01.T01:intron 60.0%
GAGTGGGAGTGGGAGAATCG+GGG - Chr3:86141692-86141711 MsG0380016651.01.T01:intron 60.0%
GGAGAATCGGGGTGGAGTTG+TGG - Chr3:86141703-86141722 MsG0380016651.01.T01:intron 60.0%
GGCTTGAGGCTCCCCTCAAA+TGG - Chr3:86143983-86144002 MsG0380016651.01.T01:CDS 60.0%
GTGGAGCACGGCTCTCTTCA+AGG - Chr3:86141867-86141886 MsG0380016651.01.T01:intron 60.0%
TAGGTGGAGCTTGCCCATGG+AGG - Chr3:86143031-86143050 MsG0380016651.01.T01:intron 60.0%
TCGGACTTCTGCTCCTGCTG+GGG + Chr3:86144868-86144887 None:intergenic 60.0%
TGATGGCCCTCTGCCTCCAT+GGG + Chr3:86143047-86143066 None:intergenic 60.0%
!! AGACGTGGGTATGGTGGTGG+TGG - Chr3:86143076-86143095 MsG0380016651.01.T01:intron 60.0%
GAGCTTGCCCATGGAGGCAG+AGG - Chr3:86143037-86143056 MsG0380016651.01.T01:intron 65.0%
GTCTCCACGATCACCACGCC+AGG - Chr3:86145197-86145216 MsG0380016651.01.T01:intron 65.0%
TCCTGCTGGGGCTTCTGCTG+CGG + Chr3:86144856-86144875 None:intergenic 65.0%
TGGGAGTGGGAGAATCGGGG+TGG - Chr3:86141695-86141714 MsG0380016651.01.T01:intron 65.0%
!! CGTGGGTATGGTGGTGGTGG+CGG - Chr3:86143079-86143098 MsG0380016651.01.T01:intron 65.0%
!! GGGTATGGTGGTGGTGGCGG+CGG - Chr3:86143082-86143101 MsG0380016651.01.T01:intron 70.0%
!! TATGGTGGTGGTGGCGGCGG+TGG - Chr3:86143085-86143104 MsG0380016651.01.T01:intron 70.0%
!!! GGTGCTGGTGGGGGCCGTTT+TGG - Chr3:86143130-86143149 MsG0380016651.01.T01:intron 70.0%
GCCGCAGCAGAAGCCCCAGC+AGG - Chr3:86144852-86144871 MsG0380016651.01.T01:five_prime_UTR 75.0%
!! CGGCGGTGACGGTGCTGGTG+GGG - Chr3:86143120-86143139 MsG0380016651.01.T01:intron 75.0%
!! GCGGCGGTGACGGTGCTGGT+GGG - Chr3:86143119-86143138 MsG0380016651.01.T01:intron 75.0%
!! GGCGGTGACGGTGCTGGTGG+GGG - Chr3:86143121-86143140 MsG0380016651.01.T01:intron 75.0%
! GGCAGAGGCGGCGGCGGTGA+CGG - Chr3:86143109-86143128 MsG0380016651.01.T01:intron 80.0%
!! GGCGGCGGTGACGGTGCTGG+TGG - Chr3:86143118-86143137 MsG0380016651.01.T01:intron 80.0%
!! GGCGGCGGTGGTGGCAGAGG+CGG - Chr3:86143097-86143116 MsG0380016651.01.T01:intron 80.0%
!! GGCGGTGGTGGCAGAGGCGG+CGG - Chr3:86143100-86143119 MsG0380016651.01.T01:intron 80.0%
!! GGTGGCGGCGGTGGTGGCAG+AGG - Chr3:86143094-86143113 MsG0380016651.01.T01:intron 80.0%
!! GGTGGTGGCAGAGGCGGCGG+CGG - Chr3:86143103-86143122 MsG0380016651.01.T01:intron 80.0%
!!! GGTGGTGGTGGCGGCGGTGG+TGG - Chr3:86143088-86143107 MsG0380016651.01.T01:intron 80.0%
!! GGCGGCGGCGGTGACGGTGC+TGG - Chr3:86143115-86143134 MsG0380016651.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr3 gene 86140814 86146109 86140814 ID=MsG0380016651.01;Name=MsG0380016651.01
Chr3 mRNA 86140814 86146109 86140814 ID=MsG0380016651.01.T01;Parent=MsG0380016651.01;Name=MsG0380016651.01.T01;_AED=0.38;_eAED=0.38;_QI=270|0.62|1|1|0.75|0.66|9|454|179
Chr3 exon 86140814 86141313 86140814 ID=MsG0380016651.01.T01:exon:22100;Parent=MsG0380016651.01.T01
Chr3 exon 86142023 86142102 86142023 ID=MsG0380016651.01.T01:exon:22099;Parent=MsG0380016651.01.T01
Chr3 exon 86142410 86142466 86142410 ID=MsG0380016651.01.T01:exon:22098;Parent=MsG0380016651.01.T01
Chr3 exon 86142563 86142612 86142563 ID=MsG0380016651.01.T01:exon:22097;Parent=MsG0380016651.01.T01
Chr3 exon 86143745 86143889 86143745 ID=MsG0380016651.01.T01:exon:22096;Parent=MsG0380016651.01.T01
Chr3 exon 86143964 86144038 86143964 ID=MsG0380016651.01.T01:exon:22095;Parent=MsG0380016651.01.T01
Chr3 exon 86144765 86144879 86144765 ID=MsG0380016651.01.T01:exon:22094;Parent=MsG0380016651.01.T01
Chr3 exon 86145022 86145157 86145022 ID=MsG0380016651.01.T01:exon:22093;Parent=MsG0380016651.01.T01
Chr3 exon 86146004 86146109 86146004 ID=MsG0380016651.01.T01:exon:22092;Parent=MsG0380016651.01.T01
Chr3 five_prime_UTR 86146004 86146109 86146004 ID=MsG0380016651.01.T01:five_prime_utr;Parent=MsG0380016651.01.T01
Chr3 five_prime_UTR 86145022 86145157 86145022 ID=MsG0380016651.01.T01:five_prime_utr;Parent=MsG0380016651.01.T01
Chr3 five_prime_UTR 86144852 86144879 86144852 ID=MsG0380016651.01.T01:five_prime_utr;Parent=MsG0380016651.01.T01
Chr3 CDS 86144765 86144851 86144765 ID=MsG0380016651.01.T01:cds;Parent=MsG0380016651.01.T01
Chr3 CDS 86143964 86144038 86143964 ID=MsG0380016651.01.T01:cds;Parent=MsG0380016651.01.T01
Chr3 CDS 86143745 86143889 86143745 ID=MsG0380016651.01.T01:cds;Parent=MsG0380016651.01.T01
Chr3 CDS 86142563 86142612 86142563 ID=MsG0380016651.01.T01:cds;Parent=MsG0380016651.01.T01
Chr3 CDS 86142410 86142466 86142410 ID=MsG0380016651.01.T01:cds;Parent=MsG0380016651.01.T01
Chr3 CDS 86142023 86142102 86142023 ID=MsG0380016651.01.T01:cds;Parent=MsG0380016651.01.T01
Chr3 CDS 86141268 86141313 86141268 ID=MsG0380016651.01.T01:cds;Parent=MsG0380016651.01.T01
Chr3 three_prime_UTR 86140814 86141267 86140814 ID=MsG0380016651.01.T01:three_prime_utr;Parent=MsG0380016651.01.T01
Gene Sequence

>MsG0380016651.01.T01

ATGAGTAGTCGCTTTTCTCGCACAATCTATGTTGGCAACCTGCCCGCTGATATAAGAGAATCAGAAATTGAAGATCTGTTCTACAAGTTTGACAATGCTCGAGATGCTGAAGATGCAATTCGGGGTCGTGATGGTTACAACTTTGATGGTTGTCGATTAAGGGTGGAGCTTGCCCATGGAGGCAGAGGGCCATCATCAAGTGACAGACGTGGGTATGGTGGTGGTGGCGGCGGTGGTGGCAGAGGCGGCGGCGGTGACGGTGCTGGTGGGGGCCGTTTTGGTGTCTCTCGCCATTCTGAATTTCGAGGGACTTTTGGCCTTGTTGATTACACTAATTATGATGACATGAAATATGCTATTCGGAAACTGGATGACACCGAGTTTAGAAATCCTTGGGCGAGATCATATATTCGGGTGAGGAAGTATGAGAGCAGTCGTTCAAGGAGCCGCAGCAGAAGCCCCAGCAGGAGCAGAAGTCCGAAAAGGGCCAGAAGGTTCTGTCTGGTAGCGGTTGATTTGCTGACAAATGCTGATCTCTAA
Protein sequence

>MsG0380016651.01.T01

MSSRFSRTIYVGNLPADIRESEIEDLFYKFDNARDAEDAIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDGAGGGRFGVSRHSEFRGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYESSRSRSRSRSPSRSRSPKRARRFCLVAVDLLTNADL*