AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016980.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016980.01.T01 MTR_3g098780 97.396 192 5 0 1 192 1 192 1.22e-139 387
MsG0380016980.01.T01 MTR_3g098780 97.396 192 5 0 1 192 25 216 2.22e-139 387
MsG0380016980.01.T01 MTR_1g021150 50.000 144 70 2 6 149 5 146 3.16e-42 139
MsG0380016980.01.T01 MTR_8g071040 48.611 144 72 2 6 149 5 146 9.28e-42 138
MsG0380016980.01.T01 MTR_5g075580 48.611 144 72 2 6 149 5 146 1.76e-41 137
MsG0380016980.01.T01 MTR_7g116940 48.611 144 72 2 6 149 5 146 2.17e-41 137
MsG0380016980.01.T01 MTR_3g062450 48.611 144 72 2 6 149 5 146 2.19e-41 137
MsG0380016980.01.T01 MTR_4g073240 49.306 144 71 2 6 149 5 146 8.72e-41 135
MsG0380016980.01.T01 MTR_1g021150 52.893 121 56 1 29 149 35 154 1.88e-39 132
MsG0380016980.01.T01 MTR_2g078010 48.438 128 65 1 22 149 24 150 7.72e-39 130
MsG0380016980.01.T01 MTR_5g075580 54.867 113 50 1 37 149 6 117 1.02e-38 129
MsG0380016980.01.T01 MTR_7g116940 46.358 151 72 3 6 149 5 153 1.93e-38 129
MsG0380016980.01.T01 MTR_4g073240 55.752 113 49 1 37 149 6 117 1.10e-37 126
MsG0380016980.01.T01 MTR_2g078010 48.739 119 60 1 22 140 24 141 5.47e-35 120
MsG0380016980.01.T01 MTR_2g078010 43.662 142 65 2 22 149 24 164 6.96e-35 121
MsG0380016980.01.T01 MTR_8g085690 42.759 145 81 2 6 150 26 168 7.09e-34 118
MsG0380016980.01.T01 MTR_3g110110 40.678 118 69 1 5 121 6 123 1.29e-30 110
MsG0380016980.01.T01 MTR_1g095510 39.706 136 79 2 6 139 45 179 1.30e-29 108
MsG0380016980.01.T01 MTR_7g116940 49.533 107 52 2 6 112 5 109 4.65e-28 102
MsG0380016980.01.T01 MTR_1g095510 45.370 108 58 1 6 113 45 151 6.38e-28 103
MsG0380016980.01.T01 MTR_1g095510 43.925 107 59 1 22 128 7 112 1.76e-27 101
MsG0380016980.01.T01 MTR_4g108080 33.803 142 85 2 1 142 10 142 4.74e-26 98.2
MsG0380016980.01.T01 MTR_8g468530 33.803 142 85 2 1 142 26 158 5.87e-26 98.2
MsG0380016980.01.T01 MTR_7g087590 36.434 129 81 1 22 150 29 156 8.11e-26 100
MsG0380016980.01.T01 MTR_4g076200 39.259 135 78 3 6 138 36 168 5.15e-25 96.3
MsG0380016980.01.T01 MTR_8g028920 30.882 136 93 1 21 155 18 153 7.71e-25 95.9
MsG0380016980.01.T01 MTR_2g078010 50.000 86 42 1 22 107 24 108 1.09e-24 93.2
MsG0380016980.01.T01 MTR_5g009020 39.837 123 72 2 6 128 36 156 2.89e-24 94.4
MsG0380016980.01.T01 MTR_4g076200 40.000 120 69 2 21 138 9 127 4.82e-24 92.4
MsG0380016980.01.T01 MTR_4g073240 54.878 82 36 1 68 149 4 84 8.58e-24 90.1
MsG0380016980.01.T01 MTR_4g108080 36.275 102 64 1 41 142 42 142 1.67e-22 89.0
MsG0380016980.01.T01 MTR_8g028920 33.333 111 73 1 46 155 4 114 1.71e-21 86.3
MsG0380016980.01.T01 MTR_8g098595 29.323 133 93 1 24 155 6 138 3.29e-21 85.9
MsG0380016980.01.T01 MTR_4g106690 31.298 131 89 1 21 150 18 148 3.41e-21 86.3
MsG0380016980.01.T01 MTR_4g108080 36.842 114 63 2 1 114 10 114 1.66e-20 82.8
MsG0380016980.01.T01 MTR_4g094872 35.965 114 70 2 31 142 37 149 6.26e-19 79.7
MsG0380016980.01.T01 MTR_4g063490 28.926 121 72 2 30 137 32 151 2.62e-18 78.6
MsG0380016980.01.T01 MTR_5g016630 36.190 105 64 2 31 133 37 140 7.94e-18 77.0
MsG0380016980.01.T01 MTR_2g096690 30.973 113 64 2 31 130 33 144 1.07e-17 76.6
MsG0380016980.01.T01 MTR_2g096690 31.532 111 62 2 31 128 33 142 5.17e-17 75.1
MsG0380016980.01.T01 MTR_5g019480 34.375 96 62 1 47 142 24 118 1.04e-14 68.2
MsG0380016980.01.T01 MTR_5g019480 34.375 96 62 1 47 142 72 166 1.64e-14 68.6
MsG0380016980.01.T01 MTR_5g019480 34.375 96 62 1 47 142 75 169 1.69e-14 68.9
MsG0380016980.01.T01 MTR_5g021260 40.594 101 54 4 6 104 19 115 3.03e-14 67.4
MsG0380016980.01.T01 MTR_1g073600 37.500 72 41 1 35 106 29 96 4.43e-14 66.2
MsG0380016980.01.T01 MTR_8g076490 38.614 101 56 4 6 104 19 115 1.25e-13 65.9
MsG0380016980.01.T01 MTR_2g096690 34.118 85 42 2 31 102 33 116 1.61e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016980.01.T01 AT5G50870 75.916 191 44 1 1 191 1 189 1.77e-110 313
MsG0380016980.01.T01 AT5G50870 71.782 202 44 2 1 191 1 200 5.22e-107 305
MsG0380016980.01.T01 AT5G41700 49.306 144 72 1 6 149 5 147 1.71e-43 142
MsG0380016980.01.T01 AT3G08690 48.611 144 72 2 6 149 5 146 2.91e-42 139
MsG0380016980.01.T01 AT3G08690 48.611 144 72 2 6 149 5 146 2.91e-42 139
MsG0380016980.01.T01 AT4G27960 48.611 144 72 2 6 149 5 146 3.50e-42 139
MsG0380016980.01.T01 AT5G53300 48.611 144 72 2 6 149 5 146 5.59e-42 138
MsG0380016980.01.T01 AT5G53300 48.611 144 72 2 6 149 5 146 5.59e-42 138
MsG0380016980.01.T01 AT5G53300 48.611 144 72 2 6 149 5 146 5.59e-42 138
MsG0380016980.01.T01 AT1G64230 47.917 144 73 2 6 149 5 146 7.66e-42 138
MsG0380016980.01.T01 AT1G64230 47.917 144 73 2 6 149 5 146 7.66e-42 138
MsG0380016980.01.T01 AT4G27960 48.611 144 72 2 6 149 35 176 1.17e-41 139
MsG0380016980.01.T01 AT5G41700 48.611 144 72 2 6 149 5 146 1.79e-41 137
MsG0380016980.01.T01 AT5G41700 48.611 144 72 2 6 149 5 146 1.79e-41 137
MsG0380016980.01.T01 AT5G41700 48.611 144 72 2 6 149 5 146 1.79e-41 137
MsG0380016980.01.T01 AT1G64230 47.368 152 71 3 6 149 5 155 4.49e-41 136
MsG0380016980.01.T01 AT5G56150 47.917 144 73 2 6 149 5 146 8.37e-41 135
MsG0380016980.01.T01 AT2G16740 47.917 144 73 2 6 149 5 146 1.70e-40 135
MsG0380016980.01.T01 AT1G64230 45.324 139 75 1 11 149 51 188 1.16e-39 134
MsG0380016980.01.T01 AT1G64230 45.324 139 75 1 11 149 51 188 1.16e-39 134
MsG0380016980.01.T01 AT1G78870 49.219 128 64 1 22 149 24 150 2.20e-39 132
MsG0380016980.01.T01 AT1G16890 48.438 128 65 1 22 149 24 150 6.57e-39 131
MsG0380016980.01.T01 AT1G16890 48.438 128 65 1 22 149 33 159 1.54e-38 130
MsG0380016980.01.T01 AT1G78870 53.153 111 51 1 39 149 8 117 4.10e-38 127
MsG0380016980.01.T01 AT1G16890 53.153 111 51 1 39 149 8 117 4.88e-38 127
MsG0380016980.01.T01 AT3G08700 42.361 144 82 1 6 149 5 147 1.92e-36 124
MsG0380016980.01.T01 AT3G08700 42.361 144 82 1 6 149 5 147 1.92e-36 124
MsG0380016980.01.T01 AT1G78870 52.679 112 51 2 39 149 8 118 2.21e-36 123
MsG0380016980.01.T01 AT3G13550 40.690 145 84 2 6 150 40 182 1.54e-35 123
MsG0380016980.01.T01 AT5G25760 40.496 121 71 1 5 124 6 126 2.44e-30 109
MsG0380016980.01.T01 AT5G25760 40.496 121 71 1 5 124 6 126 2.44e-30 109
MsG0380016980.01.T01 AT1G36340 39.552 134 80 1 18 151 22 154 9.16e-29 105
MsG0380016980.01.T01 AT1G36340 39.552 134 80 1 18 151 22 154 9.16e-29 105
MsG0380016980.01.T01 AT5G56150 50.495 101 48 2 6 106 5 103 2.07e-28 102
MsG0380016980.01.T01 AT5G41700 50.476 105 50 2 6 110 5 107 2.17e-28 103
MsG0380016980.01.T01 AT3G24515 40.741 135 75 2 31 161 68 201 3.47e-28 109
MsG0380016980.01.T01 AT3G24515 42.520 127 68 2 39 161 51 176 6.83e-28 108
MsG0380016980.01.T01 AT5G53300 52.577 97 44 2 6 102 5 99 8.59e-28 101
MsG0380016980.01.T01 AT3G13550 41.593 113 64 2 6 118 40 150 8.66e-28 103
MsG0380016980.01.T01 AT5G05080 36.434 129 81 1 22 150 29 156 7.39e-27 102
MsG0380016980.01.T01 AT5G05080 36.434 129 81 1 22 150 29 156 7.39e-27 102
MsG0380016980.01.T01 AT5G05080 36.434 129 81 1 22 150 29 156 7.39e-27 102
MsG0380016980.01.T01 AT5G05080 36.434 129 81 1 22 150 29 156 7.39e-27 102
MsG0380016980.01.T01 AT5G62540 36.496 137 78 2 1 137 10 137 1.27e-26 99.8
MsG0380016980.01.T01 AT1G14400 34.507 142 84 2 1 142 10 142 2.29e-26 99.0
MsG0380016980.01.T01 AT1G14400 34.507 142 84 2 1 142 10 142 2.29e-26 99.0
MsG0380016980.01.T01 AT2G02760 33.803 142 85 2 1 142 10 142 7.23e-26 97.8
MsG0380016980.01.T01 AT2G02760 33.803 142 85 2 1 142 10 142 7.23e-26 97.8
MsG0380016980.01.T01 AT2G02760 33.803 142 85 2 1 142 10 142 7.23e-26 97.8
MsG0380016980.01.T01 AT2G02760 33.803 142 85 2 1 142 10 142 7.23e-26 97.8
MsG0380016980.01.T01 AT1G78870 48.889 90 45 1 22 111 24 112 2.79e-25 95.1
MsG0380016980.01.T01 AT1G63800 32.061 131 88 1 21 150 3 133 2.24e-24 94.4
MsG0380016980.01.T01 AT1G63800 32.061 131 88 1 21 150 18 148 2.27e-24 94.7
MsG0380016980.01.T01 AT2G46030 33.588 131 86 1 21 150 18 148 5.03e-23 91.3
MsG0380016980.01.T01 AT2G46030 33.588 131 86 1 21 150 18 148 5.03e-23 91.3
MsG0380016980.01.T01 AT3G20060 39.837 123 72 2 6 128 40 160 5.17e-23 91.3
MsG0380016980.01.T01 AT2G46030 33.588 131 86 1 21 150 21 151 7.50e-23 90.9
MsG0380016980.01.T01 AT2G46030 33.588 131 86 1 21 150 21 151 7.50e-23 90.9
MsG0380016980.01.T01 AT5G41340 32.143 140 93 2 21 159 18 156 9.30e-23 90.5
MsG0380016980.01.T01 AT2G46030 33.588 131 86 1 21 150 90 220 9.42e-23 92.0
MsG0380016980.01.T01 AT3G20060 40.367 109 64 1 22 130 10 117 2.16e-22 88.2
MsG0380016980.01.T01 AT1G50490 42.424 99 56 1 30 128 62 159 1.23e-21 87.4
MsG0380016980.01.T01 AT5G41340 35.088 114 72 2 47 159 9 121 3.75e-21 85.5
MsG0380016980.01.T01 AT2G32790 42.149 121 69 1 30 150 57 176 6.65e-20 82.8
MsG0380016980.01.T01 AT5G59300 30.833 120 69 2 31 137 33 151 3.08e-18 78.2
MsG0380016980.01.T01 AT3G57870 41.935 93 51 2 31 121 38 129 4.02e-18 77.8
MsG0380016980.01.T01 AT3G55380 27.737 137 84 3 14 137 18 152 5.63e-18 77.4
MsG0380016980.01.T01 AT3G46460 29.167 120 71 2 31 137 33 151 3.27e-17 75.5
MsG0380016980.01.T01 AT2G18600 34.375 96 62 1 47 142 74 168 2.45e-14 68.6
MsG0380016980.01.T01 AT2G18600 34.375 96 62 1 47 142 74 168 2.45e-14 68.6
MsG0380016980.01.T01 AT4G36800 35.714 98 59 2 47 141 73 169 5.13e-14 67.4
MsG0380016980.01.T01 AT4G36800 35.714 98 59 2 47 141 73 169 5.13e-14 67.4
MsG0380016980.01.T01 AT3G46460 27.184 103 61 2 48 137 8 109 5.52e-14 65.9
MsG0380016980.01.T01 AT3G46460 27.184 103 61 2 48 137 8 109 5.52e-14 65.9
MsG0380016980.01.T01 AT1G75440 40.000 100 56 4 6 104 19 115 7.69e-14 66.6
MsG0380016980.01.T01 AT4G36410 38.614 101 56 4 6 104 19 115 8.72e-14 66.2
MsG0380016980.01.T01 AT1G45050 40.000 100 56 4 6 104 19 115 1.44e-13 65.9
MsG0380016980.01.T01 AT5G42990 37.864 103 58 4 6 106 19 117 3.16e-12 62.4
MsG0380016980.01.T01 AT3G55380 23.392 171 82 4 14 137 18 186 3.20e-12 63.2

Find 76 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATTGAATACATCATTAT+TGG 0.164921 3:+90268368 MsG0380016980.01.T01:three_prime_UTR
TTAGGACTAGAATTATATTT+TGG 0.226607 3:-90268438 None:intergenic
TTAGTTGAAAACTTCATCTT+TGG 0.252439 3:-90265084 None:intergenic
ATACCTGCTACTATGAAATT+AGG 0.263827 3:-90268322 None:intergenic
TTGAATTGCGAGGAATTTCT+AGG 0.273969 3:+90264714 MsG0380016980.01.T01:five_prime_UTR
CCAGGCAAATAGCACCATTT+TGG 0.277416 3:-90266608 None:intergenic
TTGGAAGCACATAGACAAAA+AGG 0.287093 3:+90268159 MsG0380016980.01.T01:three_prime_UTR
CCAAATATCAGCAGCCAAAA+TGG 0.296528 3:+90266594 MsG0380016980.01.T01:CDS
ATGCTCCTTACTTGAGCTTC+AGG 0.302104 3:-90268014 None:intergenic
TTCATCTTTGGAGGTTCAAA+TGG 0.346203 3:-90265072 None:intergenic
TTTGTTTCAGGTACAGAAAC+TGG 0.353135 3:+90267977 MsG0380016980.01.T01:intron
GACTTGATCGGAACCATTCC+TGG 0.365294 3:+90264855 MsG0380016980.01.T01:CDS
GTTGAAAACTTCATCTTTGG+AGG 0.420874 3:-90265081 None:intergenic
AGCTCAAGTAAGGAGCATTC+TGG 0.431466 3:+90268019 MsG0380016980.01.T01:CDS
TTGTCAATACTGCTCGCTAC+TGG 0.432476 3:+90266952 MsG0380016980.01.T01:CDS
CAACAAGATTATCGCCTTTG+AGG 0.439115 3:-90264833 None:intergenic
CTACTTCACGGATAAGTTGT+TGG 0.455995 3:+90268399 MsG0380016980.01.T01:three_prime_UTR
AGATGCTGTTGTGGCACAGC+AGG 0.460317 3:+90266728 MsG0380016980.01.T01:CDS
CGCAAAGACGCTGAGGGATC+CGG 0.462737 3:+90264798 MsG0380016980.01.T01:CDS
CGGATCCCTCAGCGTCTTTG+CGG 0.463407 3:-90264797 None:intergenic
CTATACGATATATCTTCAAT+AGG 0.465027 3:-90268210 None:intergenic
ATCTCGTGGGGTTGAAGATA+AGG 0.467808 3:+90266998 MsG0380016980.01.T01:CDS
TTGGCAAGGTTTCTACTTCA+CGG 0.472467 3:+90268387 MsG0380016980.01.T01:three_prime_UTR
ACAGCATCTTGAGGATCATC+AGG 0.475012 3:-90266714 None:intergenic
TGTCCTAATTTCATAGTAGC+AGG 0.475512 3:+90268319 MsG0380016980.01.T01:three_prime_UTR
CAGATTGATATCACATTACC+CGG 0.482963 3:+90264912 MsG0380016980.01.T01:CDS
AACAAGATTATCGCCTTTGA+GGG 0.483361 3:-90264832 None:intergenic
GTTTCAGATTGAATTGAAGA+TGG 0.490545 3:+90264737 MsG0380016980.01.T01:exon
CCAAAATGGTGCTATTTGCC+TGG 0.491583 3:+90266608 MsG0380016980.01.T01:CDS
CAGTCTTCAGAGTAAGTGCC+GGG 0.508324 3:-90266653 None:intergenic
TTTGAGGGCAACACGAATAC+CGG 0.511459 3:-90264817 None:intergenic
ACTGATCTTTCAAGATGTCC+AGG 0.513317 3:-90266626 None:intergenic
TGAATACATCATTATTGGCA+AGG 0.513649 3:+90268373 MsG0380016980.01.T01:three_prime_UTR
ACCACCATCATATGGAGTTC+CGG 0.519784 3:-90264883 None:intergenic
TCATCTTTGGAGGTTCAAAT+GGG 0.522975 3:-90265071 None:intergenic
TATGGAGTTCCGGTGGGACC+AGG 0.523722 3:-90264873 None:intergenic
GGTACAGAAACTGGTTGAGA+TGG 0.524721 3:+90267986 MsG0380016980.01.T01:intron
GTTTCGAACGAGCAAAGAAA+AGG 0.525216 3:-90268251 None:intergenic
GATAATCTTGTTGACTTGAT+CGG 0.530753 3:+90264843 MsG0380016980.01.T01:CDS
TGTTGGTGGTGATGAAAACT+TGG 0.531463 3:+90268046 MsG0380016980.01.T01:CDS
GATTTCCTGAAGCTCAAGTA+AGG 0.532686 3:+90268009 MsG0380016980.01.T01:CDS
AACCCCACGAGATGATGTCT+TGG 0.543671 3:-90266988 None:intergenic
TGAATTGCGAGGAATTTCTA+GGG 0.549424 3:+90264715 MsG0380016980.01.T01:five_prime_UTR
GGACTTTGCTCGCGTACAGA+AGG 0.553383 3:+90264761 MsG0380016980.01.T01:CDS
GCAGTCTTCAGAGTAAGTGC+CGG 0.553654 3:-90266654 None:intergenic
TTGCCAAGACATCATCTCGT+GGG 0.554224 3:+90266985 MsG0380016980.01.T01:CDS
ATGAAAACTTGGCTCTTGAA+AGG 0.555369 3:+90268057 MsG0380016980.01.T01:CDS
AGCAGAAAGAAGTGCTTGCA+CGG 0.560050 3:-90266685 None:intergenic
GGTATTCGTGTTGCCCTCAA+AGG 0.560373 3:+90264819 MsG0380016980.01.T01:CDS
AATTCCTCGCAATTCAAAGA+GGG 0.563690 3:-90264708 None:intergenic
TTTGTGACTCACCTTTGTGC+GGG 0.567900 3:-90264651 None:intergenic
CACATGTTGATGTAAGATGT+TGG 0.568763 3:+90268140 MsG0380016980.01.T01:three_prime_UTR
GTACAGAAACTGGTTGAGAT+GGG 0.573390 3:+90267987 MsG0380016980.01.T01:CDS
CTTGAAAGATCAGTGGAGCC+CGG 0.575111 3:+90266635 MsG0380016980.01.T01:CDS
TCAACCCTCTTTGAATTGCG+AGG 0.577066 3:+90264704 MsG0380016980.01.T01:five_prime_UTR
AGGAGCATTCTGGAAGCTGT+TGG 0.579746 3:+90268029 MsG0380016980.01.T01:CDS
TCAGATTGAATTGAAGATGG+TGG 0.580991 3:+90264740 MsG0380016980.01.T01:exon
AGTTCCGGTGGGACCAGGAA+TGG 0.584846 3:-90264868 None:intergenic
CCCACCGGAACTCCATATGA+TGG 0.590121 3:+90264879 MsG0380016980.01.T01:CDS
GGAACCATTCCTGGTCCCAC+CGG 0.591800 3:+90264864 MsG0380016980.01.T01:CDS
TGATCCTCAAGATGCTGTTG+TGG 0.595324 3:+90266719 MsG0380016980.01.T01:CDS
GTTTGTGACTCACCTTTGTG+CGG 0.598093 3:-90264652 None:intergenic
TCTTGAGGATCATCAGGCTG+AGG 0.611391 3:-90266708 None:intergenic
TGCCAAGACATCATCTCGTG+GGG 0.618645 3:+90266986 MsG0380016980.01.T01:CDS
AAATTCCTCGCAATTCAAAG+AGG 0.624437 3:-90264709 None:intergenic
TTTGCCAAGACATCATCTCG+TGG 0.632992 3:+90266984 MsG0380016980.01.T01:CDS
AGCATTCTGGAAGCTGTTGG+TGG 0.633448 3:+90268032 MsG0380016980.01.T01:CDS
CGATTGCCGCAAAGACGCTG+AGG 0.635164 3:+90264791 MsG0380016980.01.T01:CDS
TCTGTACCGCACCCGCACAA+AGG 0.638088 3:+90264640 None:intergenic
TGAATGTGAATGAGAAGAAG+CGG 0.643418 3:-90264674 None:intergenic
GATTGCCGCAAAGACGCTGA+GGG 0.643797 3:+90264792 MsG0380016980.01.T01:CDS
TGGACATCTTGAAAGATCAG+TGG 0.644140 3:+90266628 MsG0380016980.01.T01:CDS
ACCATCATATGGAGTTCCGG+TGG 0.650649 3:-90264880 None:intergenic
CCATCATATGGAGTTCCGGT+GGG 0.651646 3:-90264879 None:intergenic
TGTGCCACAACAGCATCTTG+AGG 0.651842 3:-90266723 None:intergenic
ACCGGAACTCCATATGATGG+TGG 0.674127 3:+90264882 MsG0380016980.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACACTAAAAAATTATAA+GGG - Chr3:90265992-90266011 None:intergenic 10.0%
!! TTAAAAAAATATTTGAATAC+CGG - Chr3:90264934-90264953 None:intergenic 10.0%
!! TTAAACACTAAAAAATTATA+AGG - Chr3:90265993-90266012 None:intergenic 10.0%
!!! ATTCAAATATTTTTTTAATC+AGG + Chr3:90264936-90264955 MsG0380016980.01.T01:intron 10.0%
!!! TTCAAATATTTTTTTAATCA+GGG + Chr3:90264937-90264956 MsG0380016980.01.T01:intron 10.0%
!! AAAAACATTTCAACTAAAAA+AGG - Chr3:90265649-90265668 None:intergenic 15.0%
!! ATTAATTAATAAACCTTGTT+GGG + Chr3:90265145-90265164 MsG0380016980.01.T01:intron 15.0%
!! TAAAAAAATATTTGAATACC+GGG - Chr3:90264933-90264952 None:intergenic 15.0%
!! TGTAATACAATATTATTAAC+TGG - Chr3:90267510-90267529 None:intergenic 15.0%
!! TTATAAATAAACACTTATCA+TGG - Chr3:90265225-90265244 None:intergenic 15.0%
!!! CTCAGTTTTTATTATTTTAT+GGG + Chr3:90267124-90267143 MsG0380016980.01.T01:intron 15.0%
!!! GATGAAAAATGTTTTTTTTT+TGG + Chr3:90265907-90265926 MsG0380016980.01.T01:intron 15.0%
!!! TCAGTTTTTATTATTTTATG+GGG + Chr3:90267125-90267144 MsG0380016980.01.T01:intron 15.0%
!! AATAAGTTGTTTATACAAAC+CGG - Chr3:90265186-90265205 None:intergenic 20.0%
!! AATCCAAGAATATATAGTTT+GGG + Chr3:90266069-90266088 MsG0380016980.01.T01:intron 20.0%
!! ATAATTACAGAGATTTCAAT+AGG - Chr3:90265561-90265580 None:intergenic 20.0%
!! CATTAATTAATAAACCTTGT+TGG + Chr3:90265144-90265163 MsG0380016980.01.T01:intron 20.0%
!! CTCATATTCAAAAACAATTA+TGG - Chr3:90267622-90267641 None:intergenic 20.0%
!! TAATCCAAGAATATATAGTT+TGG + Chr3:90266068-90266087 MsG0380016980.01.T01:intron 20.0%
!! TAATTACAGAGATTTCAATA+GGG - Chr3:90265560-90265579 None:intergenic 20.0%
!! TAGTAAGTTGTATATTACTT+AGG + Chr3:90267205-90267224 MsG0380016980.01.T01:intron 20.0%
!! TATTTAATTGATGTCTACTA+TGG + Chr3:90265608-90265627 MsG0380016980.01.T01:intron 20.0%
!! TTGATTGAATACATCATTAT+TGG + Chr3:90268368-90268387 MsG0380016980.01.T01:three_prime_UTR 20.0%
!!! AAGCTATAAGCTATTTTTAT+AGG + Chr3:90265294-90265313 MsG0380016980.01.T01:intron 20.0%
!!! ACGTCACTAATTATTTTTAT+GGG + Chr3:90267728-90267747 MsG0380016980.01.T01:intron 20.0%
!!! ATATACAACTTACTACTTTT+AGG - Chr3:90267200-90267219 None:intergenic 20.0%
!!! CAGTTTTTATTATTTTATGG+GGG + Chr3:90267126-90267145 MsG0380016980.01.T01:intron 20.0%
!!! GCTCAGTTTTTATTATTTTA+TGG + Chr3:90267123-90267142 MsG0380016980.01.T01:intron 20.0%
!!! GTCATTAAGCATATTTTAAT+TGG + Chr3:90267062-90267081 MsG0380016980.01.T01:intron 20.0%
!!! TACGTCACTAATTATTTTTA+TGG + Chr3:90267727-90267746 MsG0380016980.01.T01:intron 20.0%
!!! TATACAACTTACTACTTTTA+GGG - Chr3:90267199-90267218 None:intergenic 20.0%
! AAAACGCTTTATGAAAAAGA+TGG - Chr3:90266243-90266262 None:intergenic 25.0%
! AAACCCAAACTATATATTCT+TGG - Chr3:90266075-90266094 None:intergenic 25.0%
! AAACGCTTTATGAAAAAGAT+GGG - Chr3:90266242-90266261 None:intergenic 25.0%
! AGTAATTGCTCATACTATAA+AGG - Chr3:90266479-90266498 None:intergenic 25.0%
! ATAAGTTGTTTATACAAACC+GGG - Chr3:90265185-90265204 None:intergenic 25.0%
! ATTAGAAATGCTTAAAGAGT+GGG + Chr3:90267873-90267892 MsG0380016980.01.T01:intron 25.0%
! CAATGAATGAATATACCATT+TGG - Chr3:90267431-90267450 None:intergenic 25.0%
! CACTGTGAAATATTAAAAAG+AGG - Chr3:90267104-90267123 None:intergenic 25.0%
! CTATACGATATATCTTCAAT+AGG - Chr3:90268213-90268232 None:intergenic 25.0%
! CTATATCATCTGCAAATAAA+GGG - Chr3:90266136-90266155 None:intergenic 25.0%
! CTGTTCATCAAATATCTATT+CGG + Chr3:90266532-90266551 MsG0380016980.01.T01:intron 25.0%
! TCATAATTGTACATTAGCAA+TGG - Chr3:90267917-90267936 None:intergenic 25.0%
! TCTATATCATCTGCAAATAA+AGG - Chr3:90266137-90266156 None:intergenic 25.0%
! TTAAACCAGTGTGTATTTAT+GGG + Chr3:90266899-90266918 MsG0380016980.01.T01:intron 25.0%
! TTACTTATGCATAGCAAATA+TGG + Chr3:90266494-90266513 MsG0380016980.01.T01:intron 25.0%
! TTAGTTGAAAACTTCATCTT+TGG - Chr3:90265087-90265106 None:intergenic 25.0%
! TTGACATATTAATGACCAAA+TGG + Chr3:90267413-90267432 MsG0380016980.01.T01:intron 25.0%
! TTGATGTTGCACTTATTATT+TGG + Chr3:90267678-90267697 MsG0380016980.01.T01:intron 25.0%
! TTTAAACCAGTGTGTATTTA+TGG + Chr3:90266898-90266917 MsG0380016980.01.T01:intron 25.0%
!! GATATATCGTATAGTCTTTT+TGG + Chr3:90268219-90268238 MsG0380016980.01.T01:three_prime_UTR 25.0%
!! GATTAATTTTGTGATGCATT+TGG + Chr3:90266557-90266576 MsG0380016980.01.T01:intron 25.0%
!! GTTTTATATAAGTGTGACAA+TGG + Chr3:90265466-90265485 MsG0380016980.01.T01:intron 25.0%
!! TACAAATCCATTCTTTTGTA+AGG + Chr3:90267278-90267297 MsG0380016980.01.T01:intron 25.0%
!! TTACAAAATCTTACCACTTT+TGG - Chr3:90267790-90267809 None:intergenic 25.0%
!!! ACAAACTCTAATTTTGTTTC+AGG + Chr3:90267965-90267984 MsG0380016980.01.T01:intron 25.0%
!!! AGTGCATATTTTTATCGATT+AGG + Chr3:90266867-90266886 MsG0380016980.01.T01:intron 25.0%
!!! TACAAAATCTTACCACTTTT+GGG - Chr3:90267789-90267808 None:intergenic 25.0%
AAAAATTATAAGGGTGAGCT+TGG - Chr3:90265983-90266002 None:intergenic 30.0%
AGTTTGTGCATTTATTGCAT+TGG + Chr3:90267811-90267830 MsG0380016980.01.T01:intron 30.0%
ATACCTGCTACTATGAAATT+AGG - Chr3:90268325-90268344 None:intergenic 30.0%
ATTAAAAAGAGGTAATCAGC+TGG - Chr3:90267093-90267112 None:intergenic 30.0%
CAAAACTCAGTATCAATATC+TGG - Chr3:90266305-90266324 None:intergenic 30.0%
CAAATAAAGGGTGACATTAT+TGG - Chr3:90266124-90266143 None:intergenic 30.0%
CATAGACAAAAAGGGTTAAT+TGG + Chr3:90268168-90268187 MsG0380016980.01.T01:three_prime_UTR 30.0%
CATTAGAAATGCTTAAAGAG+TGG + Chr3:90267872-90267891 MsG0380016980.01.T01:intron 30.0%
GCATATCATGTTACTCTAAT+AGG - Chr3:90266220-90266239 None:intergenic 30.0%
GTTTCAGATTGAATTGAAGA+TGG + Chr3:90264737-90264756 MsG0380016980.01.T01:exon 30.0%
TATAACAACAAATGTGATCG+TGG + Chr3:90265714-90265733 MsG0380016980.01.T01:intron 30.0%
TCAAATAAGCCAATTCAAAC+AGG + Chr3:90265429-90265448 MsG0380016980.01.T01:intron 30.0%
TGAATACATCATTATTGGCA+AGG + Chr3:90268373-90268392 MsG0380016980.01.T01:three_prime_UTR 30.0%
TGTAAAGAAGTTGGCATATT+TGG - Chr3:90267262-90267281 None:intergenic 30.0%
TTAGAAATGCTTAAAGAGTG+GGG + Chr3:90267874-90267893 MsG0380016980.01.T01:intron 30.0%
TTGGAGAATTGGTGAAAATA+AGG + Chr3:90265322-90265341 MsG0380016980.01.T01:intron 30.0%
! GAATGGATTTGTAAAGAAGT+TGG - Chr3:90267271-90267290 None:intergenic 30.0%
! TGAAGTTTTCAACTAAAGTC+TGG + Chr3:90265091-90265110 MsG0380016980.01.T01:CDS 30.0%
! TTTTCATTTCTTTACCTGGA+TGG + Chr3:90264971-90264990 MsG0380016980.01.T01:intron 30.0%
! TTTTCCATCAACTACAGTTA+AGG - Chr3:90267350-90267369 None:intergenic 30.0%
!! ACAAAATCTTACCACTTTTG+GGG - Chr3:90267788-90267807 None:intergenic 30.0%
!! GATAATCTTGTTGACTTGAT+CGG + Chr3:90264843-90264862 MsG0380016980.01.T01:CDS 30.0%
!!! AGTGGAGTTTTTGTTGTTAT+TGG - Chr3:90265673-90265692 None:intergenic 30.0%
!!! TTTTTAATCAGGGTTAGCTA+GGG + Chr3:90264947-90264966 MsG0380016980.01.T01:intron 30.0%
!!! TTTTTTAATCAGGGTTAGCT+AGG + Chr3:90264946-90264965 MsG0380016980.01.T01:intron 30.0%
AAAAACTCCACTCGTTGAAA+GGG + Chr3:90265681-90265700 MsG0380016980.01.T01:intron 35.0%
AAATTCCTCGCAATTCAAAG+AGG - Chr3:90264712-90264731 None:intergenic 35.0%
AACAAGATTATCGCCTTTGA+GGG - Chr3:90264835-90264854 None:intergenic 35.0%
AAGTTCATCTAGCAGAAACT+TGG - Chr3:90266839-90266858 None:intergenic 35.0%
AATTCCTCGCAATTCAAAGA+GGG - Chr3:90264711-90264730 None:intergenic 35.0%
ACAAGCACAAGAAACATAAC+CGG - Chr3:90266383-90266402 None:intergenic 35.0%
ATCTATGCAATTCAGTGAAG+CGG + Chr3:90265509-90265528 MsG0380016980.01.T01:intron 35.0%
CAATAATTAACGATCCATCC+AGG - Chr3:90264988-90265007 None:intergenic 35.0%
CACATGTTGATGTAAGATGT+TGG + Chr3:90268140-90268159 MsG0380016980.01.T01:three_prime_UTR 35.0%
CAGATTGATATCACATTACC+CGG + Chr3:90264912-90264931 MsG0380016980.01.T01:CDS 35.0%
GTTGAAAACTTCATCTTTGG+AGG - Chr3:90265084-90265103 None:intergenic 35.0%
GTTTCATTTGCCTCATCATT+TGG + Chr3:90266401-90266420 MsG0380016980.01.T01:intron 35.0%
TACACCTTAACTGTAGTTGA+TGG + Chr3:90267343-90267362 MsG0380016980.01.T01:intron 35.0%
TCAGATTGAATTGAAGATGG+TGG + Chr3:90264740-90264759 MsG0380016980.01.T01:exon 35.0%
TCTGCTAGATGAACTTCTAT+TGG + Chr3:90266843-90266862 MsG0380016980.01.T01:intron 35.0%
TGAAAAACACCACCATCATA+TGG - Chr3:90264894-90264913 None:intergenic 35.0%
TGAATATGAGTCTTGCATTG+TGG + Chr3:90267632-90267651 MsG0380016980.01.T01:intron 35.0%
TGAATGTGAATGAGAAGAAG+CGG - Chr3:90264677-90264696 None:intergenic 35.0%
TGAATTGCGAGGAATTTCTA+GGG + Chr3:90264715-90264734 MsG0380016980.01.T01:five_prime_UTR 35.0%
TGCACTTAAGTTTCTGAATG+TGG + Chr3:90267033-90267052 MsG0380016980.01.T01:intron 35.0%
TGGACAAGCATGAAATTCTT+AGG - Chr3:90266819-90266838 None:intergenic 35.0%
TGTCCTAATTTCATAGTAGC+AGG + Chr3:90268319-90268338 MsG0380016980.01.T01:three_prime_UTR 35.0%
TTGAATTGCGAGGAATTTCT+AGG + Chr3:90264714-90264733 MsG0380016980.01.T01:five_prime_UTR 35.0%
! AATCCATTCTTTTGTAAGGC+AGG + Chr3:90267282-90267301 MsG0380016980.01.T01:intron 35.0%
! ATGAAAACTTGGCTCTTGAA+AGG + Chr3:90268057-90268076 MsG0380016980.01.T01:CDS 35.0%
! ATTTGGTAATCAACGAGAGA+TGG - Chr3:90266357-90266376 None:intergenic 35.0%
! CAACCAATCAACATCTCTTT+TGG - Chr3:90265812-90265831 None:intergenic 35.0%
! GGGTTTTTCATTTCTTTACC+TGG + Chr3:90264967-90264986 MsG0380016980.01.T01:intron 35.0%
! TCATCTTTGGAGGTTCAAAT+GGG - Chr3:90265074-90265093 None:intergenic 35.0%
! TGGAAGCACATAGACAAAAA+GGG + Chr3:90268160-90268179 MsG0380016980.01.T01:three_prime_UTR 35.0%
! TTCATCTTTGGAGGTTCAAA+TGG - Chr3:90265075-90265094 None:intergenic 35.0%
! TTGGAAGCACATAGACAAAA+AGG + Chr3:90268159-90268178 MsG0380016980.01.T01:three_prime_UTR 35.0%
! TTTGTTTCAGGTACAGAAAC+TGG + Chr3:90267977-90267996 MsG0380016980.01.T01:intron 35.0%
!!! CATTTTGGCTGCTGATATTT+GGG - Chr3:90266596-90266615 None:intergenic 35.0%
!!! GCTATTTTTATAGGCTCTCT+TGG + Chr3:90265303-90265322 MsG0380016980.01.T01:intron 35.0%
!!! GTTACTTTTGTTGTTGCAGA+TGG + Chr3:90265045-90265064 MsG0380016980.01.T01:intron 35.0%
!!! TTGACATGCTGTTACTTTTG+TGG + Chr3:90266033-90266052 MsG0380016980.01.T01:intron 35.0%
AATCAACGAGAGATGGTGAA+AGG - Chr3:90266350-90266369 None:intergenic 40.0%
ACAAAAGGTTCACGGTTTCT+CGG - Chr3:90265835-90265854 None:intergenic 40.0%
ACAGAGATTTCAATAGGGTG+TGG - Chr3:90265555-90265574 None:intergenic 40.0%
ACTGATCTTTCAAGATGTCC+AGG - Chr3:90266629-90266648 None:intergenic 40.0%
AGAAACATAACCGGCGAATT+TGG - Chr3:90266374-90266393 None:intergenic 40.0%
AGCTTGAACACCAAATGATG+AGG - Chr3:90266414-90266433 None:intergenic 40.0%
ATCAACGAGAGATGGTGAAA+GGG - Chr3:90266349-90266368 None:intergenic 40.0%
ATCATTTCCCTTTCAACGAG+TGG - Chr3:90265691-90265710 None:intergenic 40.0%
CAAAAACTCCACTCGTTGAA+AGG + Chr3:90265680-90265699 MsG0380016980.01.T01:intron 40.0%
CAACAAGATTATCGCCTTTG+AGG - Chr3:90264836-90264855 None:intergenic 40.0%
CAATTCAAACAGGCTCATAG+TGG + Chr3:90265439-90265458 MsG0380016980.01.T01:intron 40.0%
CACTATGAGCCTGTTTGAAT+TGG - Chr3:90265441-90265460 None:intergenic 40.0%
CAGCCAAAAGAGATGTTGAT+TGG + Chr3:90265806-90265825 MsG0380016980.01.T01:intron 40.0%
CATTGCCCATAAATACACAC+TGG - Chr3:90266907-90266926 None:intergenic 40.0%
CCAAATATCAGCAGCCAAAA+TGG + Chr3:90266594-90266613 MsG0380016980.01.T01:CDS 40.0%
CTACTTCACGGATAAGTTGT+TGG + Chr3:90268399-90268418 MsG0380016980.01.T01:three_prime_UTR 40.0%
GATTTCCTGAAGCTCAAGTA+AGG + Chr3:90268009-90268028 MsG0380016980.01.T01:CDS 40.0%
GTACAGAAACTGGTTGAGAT+GGG + Chr3:90267987-90268006 MsG0380016980.01.T01:CDS 40.0%
GTTTCGAACGAGCAAAGAAA+AGG - Chr3:90268254-90268273 None:intergenic 40.0%
TATAGGCTCTCTTGGAGAAT+TGG + Chr3:90265311-90265330 MsG0380016980.01.T01:intron 40.0%
TGACAGAAGTTTAGTGAGAC+TGG - Chr3:90265399-90265418 None:intergenic 40.0%
TGATATTTGGGTGCCTACAA+TGG - Chr3:90266584-90266603 None:intergenic 40.0%
TGATGCATTTGGACCATTGT+AGG + Chr3:90266568-90266587 MsG0380016980.01.T01:intron 40.0%
TGGACATCTTGAAAGATCAG+TGG + Chr3:90266628-90266647 MsG0380016980.01.T01:CDS 40.0%
TTGCCTGCCTTACAAAAGAA+TGG - Chr3:90267288-90267307 None:intergenic 40.0%
TTGGCAAGGTTTCTACTTCA+CGG + Chr3:90268387-90268406 MsG0380016980.01.T01:three_prime_UTR 40.0%
! CAATCAACATCTCTTTTGGC+TGG - Chr3:90265808-90265827 None:intergenic 40.0%
! GTGACAATGGAGTGTTTGAT+GGG + Chr3:90265479-90265498 MsG0380016980.01.T01:intron 40.0%
! TCGTTGATTACCAAATTCGC+CGG + Chr3:90266361-90266380 MsG0380016980.01.T01:intron 40.0%
! TGTGACAATGGAGTGTTTGA+TGG + Chr3:90265478-90265497 MsG0380016980.01.T01:intron 40.0%
!! CAACATCAATGCTCTGAAAC+TGG - Chr3:90267667-90267686 None:intergenic 40.0%
!! TGTTGGTGGTGATGAAAACT+TGG + Chr3:90268046-90268065 MsG0380016980.01.T01:CDS 40.0%
!! TTTTGGCTGGAAAACACGTT+GGG - Chr3:90265795-90265814 None:intergenic 40.0%
!!! CCATTTTGGCTGCTGATATT+TGG - Chr3:90266597-90266616 None:intergenic 40.0%
AAATGTTAACGAGTGCCCTG+GGG + Chr3:90267751-90267770 MsG0380016980.01.T01:intron 45.0%
ACAGCATCTTGAGGATCATC+AGG - Chr3:90266717-90266736 None:intergenic 45.0%
ACCACCATCATATGGAGTTC+CGG - Chr3:90264886-90264905 None:intergenic 45.0%
ACGACAAGCTGTCTCACAAA+AGG - Chr3:90265850-90265869 None:intergenic 45.0%
ATCTCGTGGGGTTGAAGATA+AGG + Chr3:90266998-90267017 MsG0380016980.01.T01:CDS 45.0%
ATGCTCCTTACTTGAGCTTC+AGG - Chr3:90268017-90268036 None:intergenic 45.0%
ATTTCAATAGGGTGTGGTGG+CGG - Chr3:90265549-90265568 None:intergenic 45.0%
CACTCTTTAAGCCCCAAAAG+TGG + Chr3:90267774-90267793 MsG0380016980.01.T01:intron 45.0%
CTCTGCTCAATAACCCAACA+AGG - Chr3:90265161-90265180 None:intergenic 45.0%
GAAATGTTAACGAGTGCCCT+GGG + Chr3:90267750-90267769 MsG0380016980.01.T01:intron 45.0%
GAGATTTCAATAGGGTGTGG+TGG - Chr3:90265552-90265571 None:intergenic 45.0%
GATCGTGGAATGAATCACGA+AGG + Chr3:90265729-90265748 MsG0380016980.01.T01:intron 45.0%
GCTGTCTCACAAAAGGTTCA+CGG - Chr3:90265843-90265862 None:intergenic 45.0%
GGTACAGAAACTGGTTGAGA+TGG + Chr3:90267986-90268005 MsG0380016980.01.T01:intron 45.0%
GTTTGTGACTCACCTTTGTG+CGG - Chr3:90264655-90264674 None:intergenic 45.0%
TATGCAATTCAGTGAAGCGG+CGG + Chr3:90265512-90265531 MsG0380016980.01.T01:intron 45.0%
TCAACCCTCTTTGAATTGCG+AGG + Chr3:90264704-90264723 MsG0380016980.01.T01:five_prime_UTR 45.0%
TGATCCTCAAGATGCTGTTG+TGG + Chr3:90266719-90266738 MsG0380016980.01.T01:CDS 45.0%
TTGCCAAGACATCATCTCGT+GGG + Chr3:90266985-90267004 MsG0380016980.01.T01:CDS 45.0%
TTGTCAATACTGCTCGCTAC+TGG + Chr3:90266952-90266971 MsG0380016980.01.T01:CDS 45.0%
TTTGAGGGCAACACGAATAC+CGG - Chr3:90264820-90264839 None:intergenic 45.0%
TTTGCCAAGACATCATCTCG+TGG + Chr3:90266984-90267003 MsG0380016980.01.T01:CDS 45.0%
TTTGGCTGGAAAACACGTTG+GGG - Chr3:90265794-90265813 None:intergenic 45.0%
TTTGTAAGGCAGGCAACATG+TGG + Chr3:90267292-90267311 MsG0380016980.01.T01:intron 45.0%
! ACGAAGGCATAAGTGAAACG+TGG + Chr3:90265745-90265764 MsG0380016980.01.T01:intron 45.0%
! CCAGGCAAATAGCACCATTT+TGG - Chr3:90266611-90266630 None:intergenic 45.0%
! CGTTGTCGTGTATGTGCTTT+TGG + Chr3:90266276-90266295 MsG0380016980.01.T01:intron 45.0%
!! AGCAGAAAGAAGTGCTTGCA+CGG - Chr3:90266688-90266707 None:intergenic 45.0%
!! AGCTCAAGTAAGGAGCATTC+TGG + Chr3:90268019-90268038 MsG0380016980.01.T01:CDS 45.0%
!! CCAAAATGGTGCTATTTGCC+TGG + Chr3:90266608-90266627 MsG0380016980.01.T01:CDS 45.0%
!! CTTTTGGCTGGAAAACACGT+TGG - Chr3:90265796-90265815 None:intergenic 45.0%
AACCCCACGAGATGATGTCT+TGG - Chr3:90266991-90267010 None:intergenic 50.0%
ACCATCATATGGAGTTCCGG+TGG - Chr3:90264883-90264902 None:intergenic 50.0%
ACCGGAACTCCATATGATGG+TGG + Chr3:90264882-90264901 MsG0380016980.01.T01:CDS 50.0%
CAGTCTTCAGAGTAAGTGCC+GGG - Chr3:90266656-90266675 None:intergenic 50.0%
CCATCATATGGAGTTCCGGT+GGG - Chr3:90264882-90264901 None:intergenic 50.0%
CTTGAAAGATCAGTGGAGCC+CGG + Chr3:90266635-90266654 MsG0380016980.01.T01:CDS 50.0%
GACTTGATCGGAACCATTCC+TGG + Chr3:90264855-90264874 MsG0380016980.01.T01:CDS 50.0%
GCAGTCTTCAGAGTAAGTGC+CGG - Chr3:90266657-90266676 None:intergenic 50.0%
GGAAATGTTAACGAGTGCCC+TGG + Chr3:90267749-90267768 MsG0380016980.01.T01:intron 50.0%
GGTATTCGTGTTGCCCTCAA+AGG + Chr3:90264819-90264838 MsG0380016980.01.T01:CDS 50.0%
TCTTGAGGATCATCAGGCTG+AGG - Chr3:90266711-90266730 None:intergenic 50.0%
TGCCAAGACATCATCTCGTG+GGG + Chr3:90266986-90267005 MsG0380016980.01.T01:CDS 50.0%
TGGGTTATTGAGCAGAGTCC+CGG + Chr3:90265164-90265183 MsG0380016980.01.T01:intron 50.0%
TGTGCCACAACAGCATCTTG+AGG - Chr3:90266726-90266745 None:intergenic 50.0%
TTGGCTGGAAAACACGTTGG+GGG - Chr3:90265793-90265812 None:intergenic 50.0%
! AGCATTCTGGAAGCTGTTGG+TGG + Chr3:90268032-90268051 MsG0380016980.01.T01:CDS 50.0%
!! AGGAGCATTCTGGAAGCTGT+TGG + Chr3:90268029-90268048 MsG0380016980.01.T01:CDS 50.0%
AGATGCTGTTGTGGCACAGC+AGG + Chr3:90266728-90266747 MsG0380016980.01.T01:CDS 55.0%
CCCACCGGAACTCCATATGA+TGG + Chr3:90264879-90264898 MsG0380016980.01.T01:CDS 55.0%
GATTGCCGCAAAGACGCTGA+GGG + Chr3:90264792-90264811 MsG0380016980.01.T01:CDS 55.0%
GGACTTTGCTCGCGTACAGA+AGG + Chr3:90264761-90264780 MsG0380016980.01.T01:CDS 55.0%
AGTTCCGGTGGGACCAGGAA+TGG - Chr3:90264871-90264890 None:intergenic 60.0%
CGATTGCCGCAAAGACGCTG+AGG + Chr3:90264791-90264810 MsG0380016980.01.T01:CDS 60.0%
CGCAAAGACGCTGAGGGATC+CGG + Chr3:90264798-90264817 MsG0380016980.01.T01:CDS 60.0%
CGGATCCCTCAGCGTCTTTG+CGG - Chr3:90264800-90264819 None:intergenic 60.0%
GGAACCATTCCTGGTCCCAC+CGG + Chr3:90264864-90264883 MsG0380016980.01.T01:CDS 60.0%
TATGGAGTTCCGGTGGGACC+AGG - Chr3:90264876-90264895 None:intergenic 60.0%
!! GGGGCTTAAAGAGTGCCCCA+GGG - Chr3:90267769-90267788 None:intergenic 60.0%
!! TGGGGCTTAAAGAGTGCCCC+AGG - Chr3:90267770-90267789 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 90264654 90268457 90264654 ID=MsG0380016980.01;Name=MsG0380016980.01
Chr3 mRNA 90264654 90268457 90264654 ID=MsG0380016980.01.T01;Parent=MsG0380016980.01;Name=MsG0380016980.01.T01;_AED=0.38;_eAED=0.38;_QI=102|1|1|1|1|1|5|369|192
Chr3 exon 90264654 90264933 90264654 ID=MsG0380016980.01.T01:exon:5762;Parent=MsG0380016980.01.T01
Chr3 exon 90265064 90265112 90265064 ID=MsG0380016980.01.T01:exon:5763;Parent=MsG0380016980.01.T01
Chr3 exon 90266590 90266749 90266590 ID=MsG0380016980.01.T01:exon:5764;Parent=MsG0380016980.01.T01
Chr3 exon 90266930 90267019 90266930 ID=MsG0380016980.01.T01:exon:5765;Parent=MsG0380016980.01.T01
Chr3 exon 90267987 90268457 90267987 ID=MsG0380016980.01.T01:exon:5766;Parent=MsG0380016980.01.T01
Chr3 five_prime_UTR 90264654 90264755 90264654 ID=MsG0380016980.01.T01:five_prime_utr;Parent=MsG0380016980.01.T01
Chr3 CDS 90264756 90264933 90264756 ID=MsG0380016980.01.T01:cds;Parent=MsG0380016980.01.T01
Chr3 CDS 90265064 90265112 90265064 ID=MsG0380016980.01.T01:cds;Parent=MsG0380016980.01.T01
Chr3 CDS 90266590 90266749 90266590 ID=MsG0380016980.01.T01:cds;Parent=MsG0380016980.01.T01
Chr3 CDS 90266930 90267019 90266930 ID=MsG0380016980.01.T01:cds;Parent=MsG0380016980.01.T01
Chr3 CDS 90267987 90268088 90267987 ID=MsG0380016980.01.T01:cds;Parent=MsG0380016980.01.T01
Chr3 three_prime_UTR 90268089 90268457 90268089 ID=MsG0380016980.01.T01:three_prime_utr;Parent=MsG0380016980.01.T01
Gene Sequence

>MsG0380016980.01.T01

ATGGTGGACTTTGCTCGCGTACAGAAGGAGCTTGTCGATTGCCGCAAAGACGCTGAGGGATCCGGTATTCGTGTTGCCCTCAAAGGCGATAATCTTGTTGACTTGATCGGAACCATTCCTGGTCCCACCGGAACTCCATATGATGGTGGTGTTTTTCAGATTGATATCACATTACCCGATGGATACCCATTTGAACCTCCAAAGATGAAGTTTTCAACTAAAGTCTGGCACCCAAATATCAGCAGCCAAAATGGTGCTATTTGCCTGGACATCTTGAAAGATCAGTGGAGCCCGGCACTTACTCTGAAGACTGCACTACTTTCCGTGCAAGCACTTCTTTCTGCTCCTCAGCCTGATGATCCTCAAGATGCTGTTGTGGCACAGCAGTATCTGAAAGATTATCAGACATTTGTCAATACTGCTCGCTACTGGACAGAAAGTTTTGCCAAGACATCATCTCGTGGGGTTGAAGATAAGGTACAGAAACTGGTTGAGATGGGATTTCCTGAAGCTCAAGTAAGGAGCATTCTGGAAGCTGTTGGTGGTGATGAAAACTTGGCTCTTGAAAGGCTGCTGTAG
Protein sequence

>MsG0380016980.01.T01

MVDFARVQKELVDCRKDAEGSGIRVALKGDNLVDLIGTIPGPTGTPYDGGVFQIDITLPDGYPFEPPKMKFSTKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFAKTSSRGVEDKVQKLVEMGFPEAQVRSILEAVGGDENLALERLL*