Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017237.01.T01 | XP_013461810.1 | 95.639 | 665 | 22 | 1 | 1 | 665 | 50 | 707 | 0 | 1264 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017237.01.T01 | Q5UNY4 | 33.244 | 373 | 211 | 10 | 277 | 629 | 135 | 489 | 1.54E-55 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017237.01.T01 | A0A072VCH4 | 95.639 | 665 | 22 | 1 | 1 | 665 | 50 | 707 | 0.0 | 1264 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048256.01 | MsG0380017237.01 | 0.803199 | 3.907662e-49 | 1.951658e-46 |
| MsG0180004439.01 | MsG0380017237.01 | 0.804256 | 2.356681e-49 | 1.209401e-46 |
| MsG0380017237.01 | MsG0380017610.01 | 0.821104 | 4.820201e-53 | 3.885452e-50 |
| MsG0380017237.01 | MsG0480022610.01 | 0.804424 | 2.174729e-49 | 1.120855e-46 |
| MsG0380017237.01 | MsG0480023606.01 | 0.806066 | 9.850747e-50 | 5.296365e-47 |
| MsG0380017237.01 | MsG0780041501.01 | 0.847100 | 1.431977e-59 | 2.518099e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017237.01.T01 | MTR_3g103410 | 95.639 | 665 | 22 | 1 | 1 | 665 | 50 | 707 | 0.0 | 1264 |
| MsG0380017237.01.T01 | MTR_6g445440 | 68.619 | 666 | 115 | 6 | 1 | 665 | 64 | 636 | 0.0 | 897 |
| MsG0380017237.01.T01 | MTR_5g045130 | 69.271 | 576 | 95 | 6 | 94 | 665 | 2 | 499 | 0.0 | 775 |
| MsG0380017237.01.T01 | MTR_5g045160 | 79.792 | 480 | 52 | 4 | 186 | 665 | 230 | 664 | 0.0 | 757 |
| MsG0380017237.01.T01 | MTR_5g045160 | 81.356 | 118 | 22 | 0 | 1 | 118 | 69 | 186 | 6.77e-63 | 221 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017237.01.T01 | AT5G13210 | 63.556 | 450 | 130 | 3 | 239 | 665 | 235 | 673 | 0.0 | 590 |
| MsG0380017237.01.T01 | AT5G13210 | 65.079 | 126 | 44 | 0 | 2 | 127 | 61 | 186 | 1.86e-49 | 184 |
| MsG0380017237.01.T01 | AT5G43400 | 61.470 | 449 | 133 | 5 | 245 | 665 | 219 | 655 | 0.0 | 551 |
| MsG0380017237.01.T01 | AT5G43400 | 62.121 | 132 | 47 | 1 | 2 | 130 | 59 | 190 | 3.05e-53 | 194 |
| MsG0380017237.01.T01 | AT3G24780 | 62.830 | 417 | 119 | 2 | 239 | 619 | 287 | 703 | 0.0 | 544 |
| MsG0380017237.01.T01 | AT3G24780 | 68.421 | 114 | 36 | 0 | 2 | 115 | 117 | 230 | 1.21e-48 | 182 |
| MsG0380017237.01.T01 | AT5G43390 | 59.060 | 447 | 145 | 6 | 245 | 665 | 209 | 643 | 1.31e-175 | 515 |
| MsG0380017237.01.T01 | AT5G43390 | 60.606 | 132 | 51 | 1 | 2 | 133 | 49 | 179 | 4.27e-51 | 188 |
Find 196 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTCCATTCTTGTTTC+TGG | -0.005923 | 3:+93863728 | None:intergenic |
| GTCCCTTCCCTTGCTGAATT+TGG | 0.166800 | 3:-93863814 | MsG0380017237.01.T01:CDS |
| AAAGAGGTTTGAGAAGTATT+TGG | 0.190204 | 3:-93862876 | MsG0380017237.01.T01:CDS |
| TCATGACATTATTCGGTCTT+TGG | 0.197358 | 3:-93862804 | MsG0380017237.01.T01:CDS |
| GCCTCAGCTTCATGTGATTC+AGG | 0.225556 | 3:-93862567 | MsG0380017237.01.T01:CDS |
| ATAGGGTTCGTGATCGTTTA+AGG | 0.225810 | 3:-93863042 | MsG0380017237.01.T01:CDS |
| AGTCTCCGGAGGAGAGTTTC+GGG | 0.227712 | 3:+93863988 | None:intergenic |
| ATATTGGATGTCGCTGTAAA+TGG | 0.230642 | 3:-93862461 | MsG0380017237.01.T01:CDS |
| GGAGGTTACAGACAAGTTTA+AGG | 0.239461 | 3:+93863932 | None:intergenic |
| GAATCTGCTGAAATTGTTCT+TGG | 0.240842 | 3:-93862204 | MsG0380017237.01.T01:CDS |
| GCTTCTATGCCGGTGCTCTT+TGG | 0.243019 | 3:-93863873 | MsG0380017237.01.T01:CDS |
| TGCTTCCTCATGACATTATT+CGG | 0.263127 | 3:-93862811 | MsG0380017237.01.T01:CDS |
| GCTTTCTGAGTGGCCGGCAC+TGG | 0.266848 | 3:+93862254 | None:intergenic |
| AGAAGACGGTAAAGGATTTC+TGG | 0.284365 | 3:+93863775 | None:intergenic |
| CGGTTGACTCTTCATTTGAT+AGG | 0.290913 | 3:-93863147 | MsG0380017237.01.T01:CDS |
| CATGACATTATTCGGTCTTT+GGG | 0.290932 | 3:-93862803 | MsG0380017237.01.T01:CDS |
| CTTTCTGAGTGGCCGGCACT+GGG | 0.294884 | 3:+93862255 | None:intergenic |
| CTTGCTGTGTGTGATGTCTC+TGG | 0.301456 | 3:-93862695 | MsG0380017237.01.T01:CDS |
| GACATTAGAAGCCAGGGTTT+TGG | 0.301639 | 3:+93863834 | None:intergenic |
| GAGTTGCCTGAGGTGTTTAT+TGG | 0.306469 | 3:-93862986 | MsG0380017237.01.T01:CDS |
| AAGTCTCCGGAGGAGAGTTT+CGG | 0.307135 | 3:+93863987 | None:intergenic |
| AGTTGCCTGAGGTGTTTATT+GGG | 0.312322 | 3:-93862985 | MsG0380017237.01.T01:CDS |
| AAGGGTGGTGAGTGGGTTAT+AGG | 0.313785 | 3:+93863951 | None:intergenic |
| TGGAGATGGTGGAGAGGTGG+CGG | 0.346229 | 3:-93862777 | MsG0380017237.01.T01:CDS |
| GGAAATTGATTCCTTACAAC+AGG | 0.348079 | 3:-93862952 | MsG0380017237.01.T01:CDS |
| ATCAAGCATCTGCAAACTCT+TGG | 0.358801 | 3:-93862379 | MsG0380017237.01.T01:CDS |
| GCCTTCACGATCGGACTTGC+CGG | 0.365526 | 3:+93863894 | None:intergenic |
| AGGAGGCGCATTATGCTTAT+AGG | 0.369882 | 3:-93863060 | MsG0380017237.01.T01:CDS |
| GCTATGGAAGCTGCAATTGC+TGG | 0.375178 | 3:-93862119 | MsG0380017237.01.T01:CDS |
| GAAGTACCGAAAAGGGGTTT+TGG | 0.380728 | 3:+93863536 | None:intergenic |
| ATATGCGATCAAATACCTTC+TGG | 0.382272 | 3:+93862480 | None:intergenic |
| GGGTGGAGATGGTGGAGAGG+TGG | 0.389441 | 3:-93862780 | MsG0380017237.01.T01:CDS |
| GAAGGTATTTGATCGCATAT+TGG | 0.402007 | 3:-93862477 | MsG0380017237.01.T01:CDS |
| GGTGCCGTTGAGGAAGGTTT+TGG | 0.404840 | 3:-93863008 | MsG0380017237.01.T01:CDS |
| ACAATCTTCTTCTCTTTCTT+CGG | 0.408408 | 3:+93863331 | None:intergenic |
| GATGTCTCTGGGAGTATGAC+TGG | 0.411259 | 3:-93862683 | MsG0380017237.01.T01:CDS |
| GGAGGCGCATTATGCTTATA+GGG | 0.411872 | 3:-93863059 | MsG0380017237.01.T01:CDS |
| GTTTGTGAGGAAGATGGATT+GGG | 0.416637 | 3:-93862519 | MsG0380017237.01.T01:CDS |
| AAATTAGTCTTGCTGCGAAA+TGG | 0.427219 | 3:-93863177 | MsG0380017237.01.T01:CDS |
| ACTAGGAAGTATAGAGAGAA+AGG | 0.427301 | 3:-93862335 | MsG0380017237.01.T01:CDS |
| CACAACTAGTTTCTGATACT+CGG | 0.428515 | 3:+93862094 | None:intergenic |
| AGTTTGTGAGGAAGATGGAT+TGG | 0.430138 | 3:-93862520 | MsG0380017237.01.T01:CDS |
| TAATCGTGAAGTACCGAAAA+GGG | 0.430475 | 3:+93863529 | None:intergenic |
| TATGGACGTGTGTGTGGCAT+TGG | 0.437885 | 3:-93862654 | MsG0380017237.01.T01:CDS |
| TGCTGCGAAATGGTGTCCTT+CGG | 0.445450 | 3:-93863167 | MsG0380017237.01.T01:CDS |
| GAGGGATGAGGCGAGGGCTG+CGG | 0.448398 | 3:-93863467 | MsG0380017237.01.T01:CDS |
| GGGCTGCGGCGAGGGCTAAG+AGG | 0.455206 | 3:-93863453 | MsG0380017237.01.T01:CDS |
| ACAACTAGTTTCTGATACTC+GGG | 0.457651 | 3:+93862095 | None:intergenic |
| GACAGAGTTTGTGAGGAAGA+TGG | 0.458990 | 3:-93862525 | MsG0380017237.01.T01:CDS |
| TATACTTCCTAGTGATTGCT+TGG | 0.460791 | 3:+93862345 | None:intergenic |
| TATTGGATGTCGCTGTAAAT+GGG | 0.461124 | 3:-93862460 | MsG0380017237.01.T01:CDS |
| TGAGGCGAGGGCTGCGGCGA+GGG | 0.461273 | 3:-93863461 | MsG0380017237.01.T01:CDS |
| CTCCGCGGCATCCGTGGTAC+CGG | 0.461336 | 3:-93863913 | MsG0380017237.01.T01:CDS |
| CAGGGTTGCGTCTGTGGCCA+TGG | 0.461754 | 3:-93862933 | MsG0380017237.01.T01:CDS |
| TATTTGGAGGATGTGAAAGC+GGG | 0.463495 | 3:-93862860 | MsG0380017237.01.T01:CDS |
| CACTCAGAAAGCAGTGGCGC+TGG | 0.468283 | 3:-93862243 | MsG0380017237.01.T01:CDS |
| GTGTGTGGCATTGGGATTGT+TGG | 0.469061 | 3:-93862645 | MsG0380017237.01.T01:CDS |
| TCAAGCATCTGCAAACTCTT+GGG | 0.470390 | 3:-93862378 | MsG0380017237.01.T01:CDS |
| GAGGTTACAGACAAGTTTAA+GGG | 0.471004 | 3:+93863933 | None:intergenic |
| GAAGACGGTAAAGGATTTCT+GGG | 0.472411 | 3:+93863776 | None:intergenic |
| GTGGATGATTTGCTCAAGAA+AGG | 0.473549 | 3:-93862734 | MsG0380017237.01.T01:CDS |
| AGGAATCAATTTCCATCGAT+TGG | 0.473816 | 3:+93862961 | None:intergenic |
| GGTTGACTCTTCATTTGATA+GGG | 0.474183 | 3:-93863146 | MsG0380017237.01.T01:CDS |
| CTTCCTCACAAACTCTGTCT+TGG | 0.475579 | 3:+93862529 | None:intergenic |
| AAAATTCTATCAAGAACAAT+GGG | 0.475978 | 3:-93863629 | MsG0380017237.01.T01:CDS |
| TTGCTGTGTGTGATGTCTCT+GGG | 0.479823 | 3:-93862694 | MsG0380017237.01.T01:CDS |
| GAAAGAGAAGAAGATTGTAT+TGG | 0.481046 | 3:-93863326 | MsG0380017237.01.T01:CDS |
| AGGAGGATCAGATGATTAAG+AGG | 0.485373 | 3:-93862430 | MsG0380017237.01.T01:CDS |
| GAGGTTTGAGAAGTATTTGG+AGG | 0.487381 | 3:-93862873 | MsG0380017237.01.T01:CDS |
| GGCTGCGGCGAGGGCTAAGA+GGG | 0.487543 | 3:-93863452 | MsG0380017237.01.T01:CDS |
| TCACCAACATTTCTCTCTAC+AGG | 0.488275 | 3:-93864057 | MsG0380017237.01.T01:CDS |
| CTTCATTGTCTGTCAGCAGA+TGG | 0.492060 | 3:+93862162 | None:intergenic |
| GGGAAGGGACATTAGAAGCC+AGG | 0.492480 | 3:+93863827 | None:intergenic |
| AAGTATAGAGAGAAAGGGTA+TGG | 0.494035 | 3:-93862329 | MsG0380017237.01.T01:CDS |
| CCTCAGCTTCATGTGATTCA+GGG | 0.494334 | 3:-93862566 | MsG0380017237.01.T01:CDS |
| GTATCAGAAACTAGTTGTGC+TGG | 0.495109 | 3:-93862090 | MsG0380017237.01.T01:CDS |
| ATAATCGTGAAGTACCGAAA+AGG | 0.495430 | 3:+93863528 | None:intergenic |
| CTGAATTGTGTGAGGAACCT+TGG | 0.496491 | 3:-93862619 | MsG0380017237.01.T01:CDS |
| ACAGACGCAACCCTGTTGTA+AGG | 0.499366 | 3:+93862941 | None:intergenic |
| TTTCTGGATCTTGCGTATGT+TGG | 0.499395 | 3:+93863744 | None:intergenic |
| CTCGATGGCGACCCCAGTGC+CGG | 0.502159 | 3:-93862267 | MsG0380017237.01.T01:CDS |
| ATTATGAGAAGAAAGAGAAG+AGG | 0.504648 | 3:-93863378 | MsG0380017237.01.T01:CDS |
| AGAGATTGCGGTGAGGGATG+AGG | 0.504746 | 3:-93863479 | MsG0380017237.01.T01:CDS |
| GAGTATGACTGGGATCCCTA+TGG | 0.505208 | 3:-93862672 | MsG0380017237.01.T01:CDS |
| TTACAACAGGGTTGCGTCTG+TGG | 0.507137 | 3:-93862939 | MsG0380017237.01.T01:CDS |
| AAAGCAGTGGCGCTGGTAAG+TGG | 0.507190 | 3:-93862236 | MsG0380017237.01.T01:CDS |
| TGTTTATTGGGGCCAATCGA+TGG | 0.508233 | 3:-93862973 | MsG0380017237.01.T01:CDS |
| TGCGGTGAGGGATGAGGCGA+GGG | 0.508537 | 3:-93863473 | MsG0380017237.01.T01:CDS |
| GGAGTATGAAGGTGTGGAGG+AGG | 0.511393 | 3:-93863077 | MsG0380017237.01.T01:CDS |
| GTAATCACCTTCCCTTTCCA+AGG | 0.512812 | 3:+93862602 | None:intergenic |
| GCCACTGCTTTCTGAGTGGC+CGG | 0.516326 | 3:+93862248 | None:intergenic |
| TCATGAAGAAACTTAAAATG+AGG | 0.516979 | 3:+93863271 | None:intergenic |
| TTTCCTAGGGAGGAGTATGA+AGG | 0.518283 | 3:-93863088 | MsG0380017237.01.T01:CDS |
| GAGTGAAGAGATTGCGGTGA+GGG | 0.519795 | 3:-93863485 | MsG0380017237.01.T01:CDS |
| ATGACATTATTCGGTCTTTG+GGG | 0.524131 | 3:-93862802 | MsG0380017237.01.T01:CDS |
| GAAGGTGATATAAGCCCTCT+AGG | 0.525667 | 3:-93862143 | MsG0380017237.01.T01:CDS |
| TATAAGCCCTCTAGGAGCTA+TGG | 0.526879 | 3:-93862135 | MsG0380017237.01.T01:CDS |
| AATGCCACACACACGTCCAT+AGG | 0.527660 | 3:+93862656 | None:intergenic |
| GACATTATTCGGTCTTTGGG+GGG | 0.529268 | 3:-93862800 | MsG0380017237.01.T01:CDS |
| CTTCTCTTTATAAAACTCCA+TGG | 0.529872 | 3:+93862916 | None:intergenic |
| CTGATTACCAAGCAATCACT+AGG | 0.538407 | 3:-93862352 | MsG0380017237.01.T01:CDS |
| TGCTCAAGAAAGGGAAGATG+AGG | 0.538489 | 3:-93862724 | MsG0380017237.01.T01:CDS |
| GATCGTGAAGGCTTCTATGC+CGG | 0.538568 | 3:-93863883 | MsG0380017237.01.T01:CDS |
| ATGAGGCGAGGGCTGCGGCG+AGG | 0.539072 | 3:-93863462 | MsG0380017237.01.T01:CDS |
| GGGAAGACTACGATCGCTGC+TGG | 0.539340 | 3:-93862839 | MsG0380017237.01.T01:CDS |
| GCAAGATCCAGAAACAAGAA+TGG | 0.540077 | 3:-93863735 | MsG0380017237.01.T01:CDS |
| ATGGACGTGTGTGTGGCATT+GGG | 0.541189 | 3:-93862653 | MsG0380017237.01.T01:CDS |
| TGTAACCTCCGCGGCATCCG+TGG | 0.543934 | 3:-93863919 | MsG0380017237.01.T01:CDS |
| CAAGTTTAAGGGTGGTGAGT+GGG | 0.544099 | 3:+93863944 | None:intergenic |
| GGCATAGAAGCCTTCACGAT+CGG | 0.545746 | 3:+93863885 | None:intergenic |
| GAAAATTCTATCAAGAACAA+TGG | 0.546038 | 3:-93863630 | MsG0380017237.01.T01:CDS |
| TGGAAGAAGAAGTCGAGACA+TGG | 0.548748 | 3:+93864030 | None:intergenic |
| TACCTTGCAGAAGACGGTAA+AGG | 0.552943 | 3:+93863767 | None:intergenic |
| GGGGTTTAACTTGAACCAAA+GGG | 0.555835 | 3:+93863575 | None:intergenic |
| ACACCTTCATACTCCTCCCT+AGG | 0.564028 | 3:+93863085 | None:intergenic |
| AACCAAATTCAGCAAGGGAA+GGG | 0.566367 | 3:+93863812 | None:intergenic |
| TGACATTATTCGGTCTTTGG+GGG | 0.566528 | 3:-93862801 | MsG0380017237.01.T01:CDS |
| TTGGAATCTGAGAGACTCGA+TGG | 0.569037 | 3:-93862282 | MsG0380017237.01.T01:CDS |
| GGAGGAGTATGAAGGTGTGG+AGG | 0.569192 | 3:-93863080 | MsG0380017237.01.T01:CDS |
| ATGCCACACACACGTCCATA+GGG | 0.569765 | 3:+93862657 | None:intergenic |
| ATCCTTTACCGTCTTCTGCA+AGG | 0.570084 | 3:-93863769 | MsG0380017237.01.T01:CDS |
| GGGGAGTGTCGGGGACAACA+TGG | 0.570272 | 3:+93864010 | None:intergenic |
| TCTCCGGAGGAGAGTTTCGG+GGG | 0.571817 | 3:+93863990 | None:intergenic |
| TTGCGGTGAGGGATGAGGCG+AGG | 0.572019 | 3:-93863474 | MsG0380017237.01.T01:CDS |
| CCCTGAATCACATGAAGCTG+AGG | 0.572263 | 3:+93862566 | None:intergenic |
| GGAGTTACAGTGGACGAGAA+TGG | 0.572730 | 3:-93862756 | MsG0380017237.01.T01:CDS |
| TGTGTTGGTGCCGTTGAGGA+AGG | 0.572986 | 3:-93863014 | MsG0380017237.01.T01:CDS |
| TGTGTGAGGAACCTTGGAAA+GGG | 0.574082 | 3:-93862613 | MsG0380017237.01.T01:CDS |
| GGAAGGGACATTAGAAGCCA+GGG | 0.574195 | 3:+93863828 | None:intergenic |
| TTGGCCCCAATAAACACCTC+AGG | 0.575991 | 3:+93862980 | None:intergenic |
| CATGAAGAAACTTAAAATGA+GGG | 0.577911 | 3:+93863272 | None:intergenic |
| TGGATGATTTGCTCAAGAAA+GGG | 0.578023 | 3:-93862733 | MsG0380017237.01.T01:CDS |
| CTAGGAAGTATAGAGAGAAA+GGG | 0.581276 | 3:-93862334 | MsG0380017237.01.T01:CDS |
| CAGCTTCCATAGCTCCTAGA+GGG | 0.582415 | 3:+93862129 | None:intergenic |
| GGTTCGTGATCGTTTAAGGA+AGG | 0.582564 | 3:-93863038 | MsG0380017237.01.T01:CDS |
| ACCATGCTAGTTGAAGTCTC+CGG | 0.584289 | 3:+93863974 | None:intergenic |
| GTTGCCTGAGGTGTTTATTG+GGG | 0.585601 | 3:-93862984 | MsG0380017237.01.T01:CDS |
| GGTTTAACTTGAACGAAAGG+AGG | 0.587513 | 3:+93863598 | None:intergenic |
| TAACCAAATTCAGCAAGGGA+AGG | 0.588634 | 3:+93863811 | None:intergenic |
| GTATTTGGAGGATGTGAAAG+CGG | 0.588845 | 3:-93862861 | MsG0380017237.01.T01:CDS |
| CGCTGTAAATGGGAATCTCA+AGG | 0.590397 | 3:-93862450 | MsG0380017237.01.T01:CDS |
| GAAGTAACCAAATTCAGCAA+GGG | 0.590777 | 3:+93863807 | None:intergenic |
| TGCCGGTACCACGGATGCCG+CGG | 0.590984 | 3:+93863911 | None:intergenic |
| TCCGGAGACTTCAACTAGCA+TGG | 0.595620 | 3:-93863975 | MsG0380017237.01.T01:CDS |
| TGAAGTAACCAAATTCAGCA+AGG | 0.597355 | 3:+93863806 | None:intergenic |
| CTCAGCTTCATGTGATTCAG+GGG | 0.597407 | 3:-93862565 | MsG0380017237.01.T01:CDS |
| TTTGTGAGGAAGATGGATTG+GGG | 0.599203 | 3:-93862518 | MsG0380017237.01.T01:CDS |
| GGTTTAACTTGAACCAAAGG+GGG | 0.600927 | 3:+93863577 | None:intergenic |
| ATGTCTCTGGGAGTATGACT+GGG | 0.602698 | 3:-93862682 | MsG0380017237.01.T01:CDS |
| TTTCTGAGTGGCCGGCACTG+GGG | 0.602919 | 3:+93862256 | None:intergenic |
| GATCGGACTTGCCGGTACCA+CGG | 0.606070 | 3:+93863902 | None:intergenic |
| GAGAGGTGGCGGAGTTACAG+TGG | 0.606406 | 3:-93862766 | MsG0380017237.01.T01:CDS |
| CAGCGCCACTGCTTTCTGAG+TGG | 0.606568 | 3:+93862244 | None:intergenic |
| ATGGTGAAACCAAAGAGCAC+CGG | 0.608515 | 3:+93863864 | None:intergenic |
| ACAAGTTTAAGGGTGGTGAG+TGG | 0.610115 | 3:+93863943 | None:intergenic |
| CCATCACCACCCCAAAACCC+TGG | 0.617883 | 3:-93863845 | MsG0380017237.01.T01:CDS |
| TTGTGAGGAAGATGGATTGG+GGG | 0.618528 | 3:-93862517 | MsG0380017237.01.T01:CDS |
| AGTCCAAGACAGAGTTTGTG+AGG | 0.622585 | 3:-93862532 | MsG0380017237.01.T01:CDS |
| TAGGGAGGAGTATGAAGGTG+TGG | 0.624294 | 3:-93863083 | MsG0380017237.01.T01:CDS |
| GATATTTGTATTCAGTGACA+TGG | 0.624325 | 3:-93862408 | MsG0380017237.01.T01:CDS |
| ATTTGGAGGATGTGAAAGCG+GGG | 0.632099 | 3:-93862859 | MsG0380017237.01.T01:CDS |
| TGTTGGTACCTTGCAGAAGA+CGG | 0.632980 | 3:+93863761 | None:intergenic |
| GCCGGCCACTCAGAAAGCAG+TGG | 0.634703 | 3:-93862249 | MsG0380017237.01.T01:CDS |
| GGAAGAAGAAGTCGAGACAT+GGG | 0.635379 | 3:+93864031 | None:intergenic |
| ACCGGCAAGTCCGATCGTGA+AGG | 0.635632 | 3:-93863895 | MsG0380017237.01.T01:CDS |
| TGGCTAAGAAGCTTGTTGAA+CGG | 0.636234 | 3:-93863306 | MsG0380017237.01.T01:CDS |
| GATCCCTATGGACGTGTGTG+TGG | 0.637269 | 3:-93862660 | MsG0380017237.01.T01:CDS |
| AAATTGTTCTTGGACAATGA+AGG | 0.639905 | 3:-93862194 | MsG0380017237.01.T01:CDS |
| CATCTGCTGACAGACAATGA+AGG | 0.644075 | 3:-93862161 | MsG0380017237.01.T01:CDS |
| AACTCCAAAACCTTCCTCAA+CGG | 0.645488 | 3:+93863004 | None:intergenic |
| GTCTCCGGAGGAGAGTTTCG+GGG | 0.647607 | 3:+93863989 | None:intergenic |
| TCAAATGAAGAGTCAACCGA+AGG | 0.647905 | 3:+93863151 | None:intergenic |
| TCGTTTAAGGAAGGATGTGT+TGG | 0.648398 | 3:-93863029 | MsG0380017237.01.T01:CDS |
| TTGCCTGTAGAGAGAAATGT+TGG | 0.651123 | 3:+93864054 | None:intergenic |
| AGGATGTGTTGGTGCCGTTG+AGG | 0.652976 | 3:-93863018 | MsG0380017237.01.T01:CDS |
| TTGTGTGAGGAACCTTGGAA+AGG | 0.654898 | 3:-93862614 | MsG0380017237.01.T01:CDS |
| GGGTTTAACTTGAACCAAAG+GGG | 0.656071 | 3:+93863576 | None:intergenic |
| CGGTACCACGGATGCCGCGG+AGG | 0.656528 | 3:+93863914 | None:intergenic |
| GTTACAGTGGACGAGAATGG+TGG | 0.656838 | 3:-93862753 | MsG0380017237.01.T01:CDS |
| TGTGTGAGAGTATTGCAAAG+AGG | 0.657314 | 3:-93863114 | MsG0380017237.01.T01:CDS |
| AATCGTGAAGTACCGAAAAG+GGG | 0.664349 | 3:+93863530 | None:intergenic |
| AAAGACCGAATAATGTCATG+AGG | 0.667681 | 3:+93862806 | None:intergenic |
| GTTACAGACAAGTTTAAGGG+TGG | 0.668561 | 3:+93863936 | None:intergenic |
| GATGAACACTGATTTCCAGA+AGG | 0.673235 | 3:-93862495 | MsG0380017237.01.T01:CDS |
| GTTGGTGTCTGAATTGTGTG+AGG | 0.673906 | 3:-93862627 | MsG0380017237.01.T01:CDS |
| TTTGATGAGTGAAGAGATTG+CGG | 0.678619 | 3:-93863491 | MsG0380017237.01.T01:CDS |
| TGAGGAACCTTGGAAAGGGA+AGG | 0.678969 | 3:-93862609 | MsG0380017237.01.T01:CDS |
| ATGCTAGTTGAAGTCTCCGG+AGG | 0.682629 | 3:+93863977 | None:intergenic |
| GCAGCTTCCATAGCTCCTAG+AGG | 0.684535 | 3:+93862128 | None:intergenic |
| GAAATTGATTCCTTACAACA+GGG | 0.685549 | 3:-93862951 | MsG0380017237.01.T01:CDS |
| TCAGCTTCATGTGATTCAGG+GGG | 0.686603 | 3:-93862564 | MsG0380017237.01.T01:CDS |
| CAACTAGTTTCTGATACTCG+GGG | 0.701259 | 3:+93862096 | None:intergenic |
| TGAGTGAAGAGATTGCGGTG+AGG | 0.713300 | 3:-93863486 | MsG0380017237.01.T01:CDS |
| CTCCGGAGGAGAGTTTCGGG+GGG | 0.715021 | 3:+93863991 | None:intergenic |
| AAACTTGTCTGTAACCTCCG+CGG | 0.727247 | 3:-93863928 | MsG0380017237.01.T01:CDS |
| TGTAAATGGGAATCTCAAGG+AGG | 0.765353 | 3:-93862447 | MsG0380017237.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGCTATTTTTTTTTCTAT+AGG | + | Chr3:93862455-93862474 | None:intergenic | 15.0% |
| !! | AAAATTCTATCAAGAACAAT+GGG | - | Chr3:93862516-93862535 | MsG0380017237.01.T01:CDS | 20.0% |
| !!! | ATATTGAGTTTTTGAAATGT+GGG | - | Chr3:93862935-93862954 | MsG0380017237.01.T01:CDS | 20.0% |
| ! | AGATTCCAAAAAACTATTTG+AGG | + | Chr3:93863852-93863871 | None:intergenic | 25.0% |
| ! | CATGAAGAAACTTAAAATGA+GGG | + | Chr3:93862876-93862895 | None:intergenic | 25.0% |
| ! | GAAAATTCTATCAAGAACAA+TGG | - | Chr3:93862515-93862534 | MsG0380017237.01.T01:CDS | 25.0% |
| ! | TCATGAAGAAACTTAAAATG+AGG | + | Chr3:93862877-93862896 | None:intergenic | 25.0% |
| !! | AGAATTTTCTTACACCAAAA+CGG | + | Chr3:93862504-93862523 | None:intergenic | 25.0% |
| !! | TTTGGATTTTCTTAACCAAA+GGG | + | Chr3:93862594-93862613 | None:intergenic | 25.0% |
| !! | TTTTGGATTTTCTTAACCAA+AGG | + | Chr3:93862595-93862614 | None:intergenic | 25.0% |
| !!! | GATATTGAGTTTTTGAAATG+TGG | - | Chr3:93862934-93862953 | MsG0380017237.01.T01:CDS | 25.0% |
| !!! | TTTTGAAGCATGATAAAAAG+AGG | - | Chr3:93863253-93863272 | MsG0380017237.01.T01:CDS | 25.0% |
| AAATTGTTCTTGGACAATGA+AGG | - | Chr3:93863951-93863970 | MsG0380017237.01.T01:CDS | 30.0% | |
| ACAATCTTCTTCTCTTTCTT+CGG | + | Chr3:93862817-93862836 | None:intergenic | 30.0% | |
| ATTATGAGAAGAAAGAGAAG+AGG | - | Chr3:93862767-93862786 | MsG0380017237.01.T01:CDS | 30.0% | |
| CTTCTCTTTATAAAACTCCA+TGG | + | Chr3:93863232-93863251 | None:intergenic | 30.0% | |
| GAAAGAGAAGAAGATTGTAT+TGG | - | Chr3:93862819-93862838 | MsG0380017237.01.T01:CDS | 30.0% | |
| GATATTTGTATTCAGTGACA+TGG | - | Chr3:93863737-93863756 | MsG0380017237.01.T01:CDS | 30.0% | |
| ! | GAAATTGATTCCTTACAACA+GGG | - | Chr3:93863194-93863213 | MsG0380017237.01.T01:CDS | 30.0% |
| ! | GAATTTTCTTACACCAAAAC+GGG | + | Chr3:93862503-93862522 | None:intergenic | 30.0% |
| ! | TCAAAATCAAAAACCCGTTT+TGG | - | Chr3:93862487-93862506 | MsG0380017237.01.T01:CDS | 30.0% |
| ! | TTGGATTTTCTTAACCAAAG+GGG | + | Chr3:93862593-93862612 | None:intergenic | 30.0% |
| ! | TTTGATTCCATTCTTGTTTC+TGG | + | Chr3:93862420-93862439 | None:intergenic | 30.0% |
| !! | AAAGAGGTTTGAGAAGTATT+TGG | - | Chr3:93863269-93863288 | MsG0380017237.01.T01:CDS | 30.0% |
| AAAGACCGAATAATGTCATG+AGG | + | Chr3:93863342-93863361 | None:intergenic | 35.0% | |
| AAGTATAGAGAGAAAGGGTA+TGG | - | Chr3:93863816-93863835 | MsG0380017237.01.T01:CDS | 35.0% | |
| AGGAATCAATTTCCATCGAT+TGG | + | Chr3:93863187-93863206 | None:intergenic | 35.0% | |
| ATATGCGATCAAATACCTTC+TGG | + | Chr3:93863668-93863687 | None:intergenic | 35.0% | |
| ATATTGGATGTCGCTGTAAA+TGG | - | Chr3:93863684-93863703 | MsG0380017237.01.T01:CDS | 35.0% | |
| ATGACATTATTCGGTCTTTG+GGG | - | Chr3:93863343-93863362 | MsG0380017237.01.T01:CDS | 35.0% | |
| CATGACATTATTCGGTCTTT+GGG | - | Chr3:93863342-93863361 | MsG0380017237.01.T01:CDS | 35.0% | |
| GAAGTAACCAAATTCAGCAA+GGG | + | Chr3:93862341-93862360 | None:intergenic | 35.0% | |
| GAATCTGCTGAAATTGTTCT+TGG | - | Chr3:93863941-93863960 | MsG0380017237.01.T01:CDS | 35.0% | |
| GAGGTTACAGACAAGTTTAA+GGG | + | Chr3:93862215-93862234 | None:intergenic | 35.0% | |
| TATACTTCCTAGTGATTGCT+TGG | + | Chr3:93863803-93863822 | None:intergenic | 35.0% | |
| TATTGGATGTCGCTGTAAAT+GGG | - | Chr3:93863685-93863704 | MsG0380017237.01.T01:CDS | 35.0% | |
| TCATGACATTATTCGGTCTT+TGG | - | Chr3:93863341-93863360 | MsG0380017237.01.T01:CDS | 35.0% | |
| TGAAGTAACCAAATTCAGCA+AGG | + | Chr3:93862342-93862361 | None:intergenic | 35.0% | |
| TGCTTCCTCATGACATTATT+CGG | - | Chr3:93863334-93863353 | MsG0380017237.01.T01:CDS | 35.0% | |
| TTTGATGAGTGAAGAGATTG+CGG | - | Chr3:93862654-93862673 | MsG0380017237.01.T01:CDS | 35.0% | |
| ! | AAAAACTATTTGAGGCACAG+CGG | + | Chr3:93863844-93863863 | None:intergenic | 35.0% |
| ! | ACAACTAGTTTCTGATACTC+GGG | + | Chr3:93864053-93864072 | None:intergenic | 35.0% |
| ! | ACTAGGAAGTATAGAGAGAA+AGG | - | Chr3:93863810-93863829 | MsG0380017237.01.T01:CDS | 35.0% |
| ! | CACAACTAGTTTCTGATACT+CGG | + | Chr3:93864054-93864073 | None:intergenic | 35.0% |
| ! | CTAGGAAGTATAGAGAGAAA+GGG | - | Chr3:93863811-93863830 | MsG0380017237.01.T01:CDS | 35.0% |
| ! | GAAAATCCAAAACCCCTTTT+CGG | - | Chr3:93862603-93862622 | MsG0380017237.01.T01:CDS | 35.0% |
| ! | GGAAATTGATTCCTTACAAC+AGG | - | Chr3:93863193-93863212 | MsG0380017237.01.T01:CDS | 35.0% |
| ! | GGTTGACTCTTCATTTGATA+GGG | - | Chr3:93862999-93863018 | MsG0380017237.01.T01:CDS | 35.0% |
| ! | TGCAAAGAGGATTTTTCCTA+GGG | - | Chr3:93863044-93863063 | MsG0380017237.01.T01:CDS | 35.0% |
| ! | TGGATTTTCTTAACCAAAGG+GGG | + | Chr3:93862592-93862611 | None:intergenic | 35.0% |
| ! | TTGCAAAGAGGATTTTTCCT+AGG | - | Chr3:93863043-93863062 | MsG0380017237.01.T01:CDS | 35.0% |
| !! | AAATTAGTCTTGCTGCGAAA+TGG | - | Chr3:93862968-93862987 | MsG0380017237.01.T01:CDS | 35.0% |
| !! | ATAATCGTGAAGTACCGAAA+AGG | + | Chr3:93862620-93862639 | None:intergenic | 35.0% |
| !! | GAAGGTATTTGATCGCATAT+TGG | - | Chr3:93863668-93863687 | MsG0380017237.01.T01:CDS | 35.0% |
| !! | TAATCGTGAAGTACCGAAAA+GGG | + | Chr3:93862619-93862638 | None:intergenic | 35.0% |
| !! | TGGATGATTTGCTCAAGAAA+GGG | - | Chr3:93863412-93863431 | MsG0380017237.01.T01:CDS | 35.0% |
| !!! | CTGTGCCTCAAATAGTTTTT+TGG | - | Chr3:93863844-93863863 | MsG0380017237.01.T01:CDS | 35.0% |
| AACCAAATTCAGCAAGGGAA+GGG | + | Chr3:93862336-93862355 | None:intergenic | 40.0% | |
| AACTCCAAAACCTTCCTCAA+CGG | + | Chr3:93863144-93863163 | None:intergenic | 40.0% | |
| AGAAGACGGTAAAGGATTTC+TGG | + | Chr3:93862373-93862392 | None:intergenic | 40.0% | |
| AGGAGGATCAGATGATTAAG+AGG | - | Chr3:93863715-93863734 | MsG0380017237.01.T01:CDS | 40.0% | |
| AGTTTGTGAGGAAGATGGAT+TGG | - | Chr3:93863625-93863644 | MsG0380017237.01.T01:CDS | 40.0% | |
| ATAGGGTTCGTGATCGTTTA+AGG | - | Chr3:93863103-93863122 | MsG0380017237.01.T01:CDS | 40.0% | |
| ATCAAGCATCTGCAAACTCT+TGG | - | Chr3:93863766-93863785 | MsG0380017237.01.T01:CDS | 40.0% | |
| CTGATTACCAAGCAATCACT+AGG | - | Chr3:93863793-93863812 | MsG0380017237.01.T01:CDS | 40.0% | |
| GAAGACGGTAAAGGATTTCT+GGG | + | Chr3:93862372-93862391 | None:intergenic | 40.0% | |
| GCAAGATCCAGAAACAAGAA+TGG | - | Chr3:93862410-93862429 | MsG0380017237.01.T01:CDS | 40.0% | |
| GGAGGTTACAGACAAGTTTA+AGG | + | Chr3:93862216-93862235 | None:intergenic | 40.0% | |
| GTATCAGAAACTAGTTGTGC+TGG | - | Chr3:93864055-93864074 | MsG0380017237.01.T01:CDS | 40.0% | |
| GTATTTGGAGGATGTGAAAG+CGG | - | Chr3:93863284-93863303 | MsG0380017237.01.T01:CDS | 40.0% | |
| GTTACAGACAAGTTTAAGGG+TGG | + | Chr3:93862212-93862231 | None:intergenic | 40.0% | |
| TAACCAAATTCAGCAAGGGA+AGG | + | Chr3:93862337-93862356 | None:intergenic | 40.0% | |
| TATTTGGAGGATGTGAAAGC+GGG | - | Chr3:93863285-93863304 | MsG0380017237.01.T01:CDS | 40.0% | |
| TCAAATGAAGAGTCAACCGA+AGG | + | Chr3:93862997-93863016 | None:intergenic | 40.0% | |
| TCAAGCATCTGCAAACTCTT+GGG | - | Chr3:93863767-93863786 | MsG0380017237.01.T01:CDS | 40.0% | |
| TCACCAACATTTCTCTCTAC+AGG | - | Chr3:93862088-93862107 | MsG0380017237.01.T01:CDS | 40.0% | |
| TCGTTTAAGGAAGGATGTGT+TGG | - | Chr3:93863116-93863135 | MsG0380017237.01.T01:CDS | 40.0% | |
| TGACATTATTCGGTCTTTGG+GGG | - | Chr3:93863344-93863363 | MsG0380017237.01.T01:CDS | 40.0% | |
| TGTAAATGGGAATCTCAAGG+AGG | - | Chr3:93863698-93863717 | MsG0380017237.01.T01:CDS | 40.0% | |
| TTGCCTGTAGAGAGAAATGT+TGG | + | Chr3:93862094-93862113 | None:intergenic | 40.0% | |
| TTTCTGGATCTTGCGTATGT+TGG | + | Chr3:93862404-93862423 | None:intergenic | 40.0% | |
| ! | AAAGAGGATTTTTCCTAGGG+AGG | - | Chr3:93863047-93863066 | MsG0380017237.01.T01:CDS | 40.0% |
| ! | ACATTAGAAGCCAGGGTTTT+GGG | + | Chr3:93862313-93862332 | None:intergenic | 40.0% |
| ! | AGTTGCCTGAGGTGTTTATT+GGG | - | Chr3:93863160-93863179 | MsG0380017237.01.T01:CDS | 40.0% |
| ! | CAACTAGTTTCTGATACTCG+GGG | + | Chr3:93864052-93864071 | None:intergenic | 40.0% |
| ! | CGCAGCAAGACTAATTTTTG+TGG | + | Chr3:93862965-93862984 | None:intergenic | 40.0% |
| ! | CGGTTGACTCTTCATTTGAT+AGG | - | Chr3:93862998-93863017 | MsG0380017237.01.T01:CDS | 40.0% |
| ! | GTTTGTGAGGAAGATGGATT+GGG | - | Chr3:93863626-93863645 | MsG0380017237.01.T01:CDS | 40.0% |
| !! | AATCGTGAAGTACCGAAAAG+GGG | + | Chr3:93862618-93862637 | None:intergenic | 40.0% |
| !! | GAGGTTTGAGAAGTATTTGG+AGG | - | Chr3:93863272-93863291 | MsG0380017237.01.T01:CDS | 40.0% |
| !! | GATGAACACTGATTTCCAGA+AGG | - | Chr3:93863650-93863669 | MsG0380017237.01.T01:CDS | 40.0% |
| !! | GGGGTTTAACTTGAACCAAA+GGG | + | Chr3:93862573-93862592 | None:intergenic | 40.0% |
| !! | GGGTTTAACTTGAACCAAAG+GGG | + | Chr3:93862572-93862591 | None:intergenic | 40.0% |
| !! | GGTTTAACTTGAACCAAAGG+GGG | + | Chr3:93862571-93862590 | None:intergenic | 40.0% |
| !! | GGTTTAACTTGAACGAAAGG+AGG | + | Chr3:93862550-93862569 | None:intergenic | 40.0% |
| !! | GTGGATGATTTGCTCAAGAA+AGG | - | Chr3:93863411-93863430 | MsG0380017237.01.T01:CDS | 40.0% |
| !! | TGGCTAAGAAGCTTGTTGAA+CGG | - | Chr3:93862839-93862858 | MsG0380017237.01.T01:CDS | 40.0% |
| !! | TGTGTGAGAGTATTGCAAAG+AGG | - | Chr3:93863031-93863050 | MsG0380017237.01.T01:CDS | 40.0% |
| !! | TTTGTGAGGAAGATGGATTG+GGG | - | Chr3:93863627-93863646 | MsG0380017237.01.T01:CDS | 40.0% |
| AAACTTGTCTGTAACCTCCG+CGG | - | Chr3:93862217-93862236 | MsG0380017237.01.T01:CDS | 45.0% | |
| ACAAGTTTAAGGGTGGTGAG+TGG | + | Chr3:93862205-93862224 | None:intergenic | 45.0% | |
| ACCATGCTAGTTGAAGTCTC+CGG | + | Chr3:93862174-93862193 | None:intergenic | 45.0% | |
| AGTCCAAGACAGAGTTTGTG+AGG | - | Chr3:93863613-93863632 | MsG0380017237.01.T01:CDS | 45.0% | |
| ATCCTTTACCGTCTTCTGCA+AGG | - | Chr3:93862376-93862395 | MsG0380017237.01.T01:CDS | 45.0% | |
| ATTTGGAGGATGTGAAAGCG+GGG | - | Chr3:93863286-93863305 | MsG0380017237.01.T01:CDS | 45.0% | |
| CAAGTTTAAGGGTGGTGAGT+GGG | + | Chr3:93862204-93862223 | None:intergenic | 45.0% | |
| CATCTGCTGACAGACAATGA+AGG | - | Chr3:93863984-93864003 | MsG0380017237.01.T01:CDS | 45.0% | |
| CCTCAGCTTCATGTGATTCA+GGG | - | Chr3:93863579-93863598 | MsG0380017237.01.T01:CDS | 45.0% | |
| CGCTGTAAATGGGAATCTCA+AGG | - | Chr3:93863695-93863714 | MsG0380017237.01.T01:CDS | 45.0% | |
| CTCAGCTTCATGTGATTCAG+GGG | - | Chr3:93863580-93863599 | MsG0380017237.01.T01:CDS | 45.0% | |
| CTGAATTGTGTGAGGAACCT+TGG | - | Chr3:93863526-93863545 | MsG0380017237.01.T01:CDS | 45.0% | |
| CTTCATTGTCTGTCAGCAGA+TGG | + | Chr3:93863986-93864005 | None:intergenic | 45.0% | |
| CTTCCTCACAAACTCTGTCT+TGG | + | Chr3:93863619-93863638 | None:intergenic | 45.0% | |
| GAAGGTGATATAAGCCCTCT+AGG | - | Chr3:93864002-93864021 | MsG0380017237.01.T01:CDS | 45.0% | |
| GACAGAGTTTGTGAGGAAGA+TGG | - | Chr3:93863620-93863639 | MsG0380017237.01.T01:CDS | 45.0% | |
| GACATTATTCGGTCTTTGGG+GGG | - | Chr3:93863345-93863364 | MsG0380017237.01.T01:CDS | 45.0% | |
| GGAAGAAGAAGTCGAGACAT+GGG | + | Chr3:93862117-93862136 | None:intergenic | 45.0% | |
| GGTTCGTGATCGTTTAAGGA+AGG | - | Chr3:93863107-93863126 | MsG0380017237.01.T01:CDS | 45.0% | |
| GTAATCACCTTCCCTTTCCA+AGG | + | Chr3:93863546-93863565 | None:intergenic | 45.0% | |
| TACCTTGCAGAAGACGGTAA+AGG | + | Chr3:93862381-93862400 | None:intergenic | 45.0% | |
| TCAGCTTCATGTGATTCAGG+GGG | - | Chr3:93863581-93863600 | MsG0380017237.01.T01:CDS | 45.0% | |
| TGCTCAAGAAAGGGAAGATG+AGG | - | Chr3:93863421-93863440 | MsG0380017237.01.T01:CDS | 45.0% | |
| TGGAAGAAGAAGTCGAGACA+TGG | + | Chr3:93862118-93862137 | None:intergenic | 45.0% | |
| TGTGTGAGGAACCTTGGAAA+GGG | - | Chr3:93863532-93863551 | MsG0380017237.01.T01:CDS | 45.0% | |
| TGTTGGTACCTTGCAGAAGA+CGG | + | Chr3:93862387-93862406 | None:intergenic | 45.0% | |
| TGTTTATTGGGGCCAATCGA+TGG | - | Chr3:93863172-93863191 | MsG0380017237.01.T01:CDS | 45.0% | |
| TTGCTGTGTGTGATGTCTCT+GGG | - | Chr3:93863451-93863470 | MsG0380017237.01.T01:CDS | 45.0% | |
| TTGGAATCTGAGAGACTCGA+TGG | - | Chr3:93863863-93863882 | MsG0380017237.01.T01:CDS | 45.0% | |
| TTGTGTGAGGAACCTTGGAA+AGG | - | Chr3:93863531-93863550 | MsG0380017237.01.T01:CDS | 45.0% | |
| ! | AGGAGGCGCATTATGCTTAT+AGG | - | Chr3:93863085-93863104 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | ATGGTGAAACCAAAGAGCAC+CGG | + | Chr3:93862284-93862303 | None:intergenic | 45.0% |
| ! | ATGTCTCTGGGAGTATGACT+GGG | - | Chr3:93863463-93863482 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | CATTAGAAGCCAGGGTTTTG+GGG | + | Chr3:93862312-93862331 | None:intergenic | 45.0% |
| ! | CGTTCAAGTTAAACCCCCTT+TGG | - | Chr3:93862555-93862574 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | GACATTAGAAGCCAGGGTTT+TGG | + | Chr3:93862314-93862333 | None:intergenic | 45.0% |
| ! | GAGTTGCCTGAGGTGTTTAT+TGG | - | Chr3:93863159-93863178 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | GGAGGCGCATTATGCTTATA+GGG | - | Chr3:93863086-93863105 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | GGTTCAAGTTAAACCCCCTT+TGG | - | Chr3:93862576-93862595 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | GTTGCCTGAGGTGTTTATTG+GGG | - | Chr3:93863161-93863180 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | GTTGGTGTCTGAATTGTGTG+AGG | - | Chr3:93863518-93863537 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | TATAAGCCCTCTAGGAGCTA+TGG | - | Chr3:93864010-93864029 | MsG0380017237.01.T01:CDS | 45.0% |
| ! | TTTCCTAGGGAGGAGTATGA+AGG | - | Chr3:93863057-93863076 | MsG0380017237.01.T01:CDS | 45.0% |
| !! | GGGGGTTTAACTTGAACCAA+AGG | + | Chr3:93862574-93862593 | None:intergenic | 45.0% |
| !! | GGGGGTTTAACTTGAACGAA+AGG | + | Chr3:93862553-93862572 | None:intergenic | 45.0% |
| !! | TTGTGAGGAAGATGGATTGG+GGG | - | Chr3:93863628-93863647 | MsG0380017237.01.T01:CDS | 45.0% |
| !!! | GAAGTACCGAAAAGGGGTTT+TGG | + | Chr3:93862612-93862631 | None:intergenic | 45.0% |
| AAGTCTCCGGAGGAGAGTTT+CGG | + | Chr3:93862161-93862180 | None:intergenic | 50.0% | |
| AATGCCACACACACGTCCAT+AGG | + | Chr3:93863492-93863511 | None:intergenic | 50.0% | |
| ACACCTTCATACTCCTCCCT+AGG | + | Chr3:93863063-93863082 | None:intergenic | 50.0% | |
| ACAGACGCAACCCTGTTGTA+AGG | + | Chr3:93863207-93863226 | None:intergenic | 50.0% | |
| ATGCCACACACACGTCCATA+GGG | + | Chr3:93863491-93863510 | None:intergenic | 50.0% | |
| ATGCTAGTTGAAGTCTCCGG+AGG | + | Chr3:93862171-93862190 | None:intergenic | 50.0% | |
| ATGGACGTGTGTGTGGCATT+GGG | - | Chr3:93863492-93863511 | MsG0380017237.01.T01:CDS | 50.0% | |
| CAGCTTCCATAGCTCCTAGA+GGG | + | Chr3:93864019-93864038 | None:intergenic | 50.0% | |
| CCCTGAATCACATGAAGCTG+AGG | + | Chr3:93863582-93863601 | None:intergenic | 50.0% | |
| GAGTATGACTGGGATCCCTA+TGG | - | Chr3:93863473-93863492 | MsG0380017237.01.T01:CDS | 50.0% | |
| GAGTGAAGAGATTGCGGTGA+GGG | - | Chr3:93862660-93862679 | MsG0380017237.01.T01:CDS | 50.0% | |
| GATCGTGAAGGCTTCTATGC+CGG | - | Chr3:93862262-93862281 | MsG0380017237.01.T01:CDS | 50.0% | |
| GCCTCAGCTTCATGTGATTC+AGG | - | Chr3:93863578-93863597 | MsG0380017237.01.T01:CDS | 50.0% | |
| GCTATGGAAGCTGCAATTGC+TGG | - | Chr3:93864026-93864045 | MsG0380017237.01.T01:CDS | 50.0% | |
| GGAAGGGACATTAGAAGCCA+GGG | + | Chr3:93862320-93862339 | None:intergenic | 50.0% | |
| GGAGTTACAGTGGACGAGAA+TGG | - | Chr3:93863389-93863408 | MsG0380017237.01.T01:CDS | 50.0% | |
| GGCATAGAAGCCTTCACGAT+CGG | + | Chr3:93862263-93862282 | None:intergenic | 50.0% | |
| GTCCCTTCCCTTGCTGAATT+TGG | - | Chr3:93862331-93862350 | MsG0380017237.01.T01:CDS | 50.0% | |
| GTTACAGTGGACGAGAATGG+TGG | - | Chr3:93863392-93863411 | MsG0380017237.01.T01:CDS | 50.0% | |
| TATGGACGTGTGTGTGGCAT+TGG | - | Chr3:93863491-93863510 | MsG0380017237.01.T01:CDS | 50.0% | |
| TCCGGAGACTTCAACTAGCA+TGG | - | Chr3:93862170-93862189 | MsG0380017237.01.T01:CDS | 50.0% | |
| TGAGGAACCTTGGAAAGGGA+AGG | - | Chr3:93863536-93863555 | MsG0380017237.01.T01:CDS | 50.0% | |
| TGAGTGAAGAGATTGCGGTG+AGG | - | Chr3:93862659-93862678 | MsG0380017237.01.T01:CDS | 50.0% | |
| TGCTGCGAAATGGTGTCCTT+CGG | - | Chr3:93862978-93862997 | MsG0380017237.01.T01:CDS | 50.0% | |
| TTACAACAGGGTTGCGTCTG+TGG | - | Chr3:93863206-93863225 | MsG0380017237.01.T01:CDS | 50.0% | |
| TTGGCCCCAATAAACACCTC+AGG | + | Chr3:93863168-93863187 | None:intergenic | 50.0% | |
| ! | ATTATTCGGTCTTTGGGGGG+TGG | - | Chr3:93863348-93863367 | MsG0380017237.01.T01:CDS | 50.0% |
| ! | CTTGCTGTGTGTGATGTCTC+TGG | - | Chr3:93863450-93863469 | MsG0380017237.01.T01:CDS | 50.0% |
| ! | GATGTCTCTGGGAGTATGAC+TGG | - | Chr3:93863462-93863481 | MsG0380017237.01.T01:CDS | 50.0% |
| ! | GTGTGTGGCATTGGGATTGT+TGG | - | Chr3:93863500-93863519 | MsG0380017237.01.T01:CDS | 50.0% |
| ! | TAGGGAGGAGTATGAAGGTG+TGG | - | Chr3:93863062-93863081 | MsG0380017237.01.T01:CDS | 50.0% |
| !! | AAGGGTGGTGAGTGGGTTAT+AGG | + | Chr3:93862197-93862216 | None:intergenic | 50.0% |
| !!! | GAAGGTTTTGGAGTTGCCTG+AGG | - | Chr3:93863149-93863168 | MsG0380017237.01.T01:CDS | 50.0% |
| AGAGATTGCGGTGAGGGATG+AGG | - | Chr3:93862666-93862685 | MsG0380017237.01.T01:CDS | 55.0% | |
| AGTCTCCGGAGGAGAGTTTC+GGG | + | Chr3:93862160-93862179 | None:intergenic | 55.0% | |
| GATCCCTATGGACGTGTGTG+TGG | - | Chr3:93863485-93863504 | MsG0380017237.01.T01:CDS | 55.0% | |
| GCAGCTTCCATAGCTCCTAG+AGG | + | Chr3:93864020-93864039 | None:intergenic | 55.0% | |
| GCTTCTATGCCGGTGCTCTT+TGG | - | Chr3:93862272-93862291 | MsG0380017237.01.T01:CDS | 55.0% | |
| GGGAAGGGACATTAGAAGCC+AGG | + | Chr3:93862321-93862340 | None:intergenic | 55.0% | |
| ! | GGAGGAGTATGAAGGTGTGG+AGG | - | Chr3:93863065-93863084 | MsG0380017237.01.T01:CDS | 55.0% |
| ! | GGAGTATGAAGGTGTGGAGG+AGG | - | Chr3:93863068-93863087 | MsG0380017237.01.T01:CDS | 55.0% |
| !! | AAAGCAGTGGCGCTGGTAAG+TGG | - | Chr3:93863909-93863928 | MsG0380017237.01.T01:CDS | 55.0% |
| !! | AGGATGTGTTGGTGCCGTTG+AGG | - | Chr3:93863127-93863146 | MsG0380017237.01.T01:CDS | 55.0% |
| !! | TGTGTTGGTGCCGTTGAGGA+AGG | - | Chr3:93863131-93863150 | MsG0380017237.01.T01:CDS | 55.0% |
| !!! | GGTGCCGTTGAGGAAGGTTT+TGG | - | Chr3:93863137-93863156 | MsG0380017237.01.T01:CDS | 55.0% |
| !!! | TAGAAGCCAGGGTTTTGGGG+TGG | + | Chr3:93862309-93862328 | None:intergenic | 55.0% |
| ACCGGCAAGTCCGATCGTGA+AGG | - | Chr3:93862250-93862269 | MsG0380017237.01.T01:CDS | 60.0% | |
| CACTCAGAAAGCAGTGGCGC+TGG | - | Chr3:93863902-93863921 | MsG0380017237.01.T01:CDS | 60.0% | |
| CAGCGCCACTGCTTTCTGAG+TGG | + | Chr3:93863904-93863923 | None:intergenic | 60.0% | |
| CCATCACCACCCCAAAACCC+TGG | - | Chr3:93862300-93862319 | MsG0380017237.01.T01:CDS | 60.0% | |
| CTTTCTGAGTGGCCGGCACT+GGG | + | Chr3:93863893-93863912 | None:intergenic | 60.0% | |
| GATCGGACTTGCCGGTACCA+CGG | + | Chr3:93862246-93862265 | None:intergenic | 60.0% | |
| GCCACTGCTTTCTGAGTGGC+CGG | + | Chr3:93863900-93863919 | None:intergenic | 60.0% | |
| GCCTTCACGATCGGACTTGC+CGG | + | Chr3:93862254-93862273 | None:intergenic | 60.0% | |
| GGGAAGACTACGATCGCTGC+TGG | - | Chr3:93863306-93863325 | MsG0380017237.01.T01:CDS | 60.0% | |
| GTCTCCGGAGGAGAGTTTCG+GGG | + | Chr3:93862159-93862178 | None:intergenic | 60.0% | |
| TCTCCGGAGGAGAGTTTCGG+GGG | + | Chr3:93862158-93862177 | None:intergenic | 60.0% | |
| TTTCTGAGTGGCCGGCACTG+GGG | + | Chr3:93863892-93863911 | None:intergenic | 60.0% | |
| ! | GAGAGTTTCGGGGGGAGTGT+CGG | + | Chr3:93862149-93862168 | None:intergenic | 60.0% |
| ! | TCTTTGGGGGGTGGAGATGG+TGG | - | Chr3:93863357-93863376 | MsG0380017237.01.T01:CDS | 60.0% |
| !! | AGAGTTTCGGGGGGAGTGTC+GGG | + | Chr3:93862148-93862167 | None:intergenic | 60.0% |
| !! | GAGAGGTGGCGGAGTTACAG+TGG | - | Chr3:93863379-93863398 | MsG0380017237.01.T01:CDS | 60.0% |
| !! | TGGAGATGGTGGAGAGGTGG+CGG | - | Chr3:93863368-93863387 | MsG0380017237.01.T01:CDS | 60.0% |
| !!! | CCAGGGTTTTGGGGTGGTGA+TGG | + | Chr3:93862303-93862322 | None:intergenic | 60.0% |
| CAGGGTTGCGTCTGTGGCCA+TGG | - | Chr3:93863212-93863231 | MsG0380017237.01.T01:CDS | 65.0% | |
| CTCCCCCCGAAACTCTCCTC+CGG | - | Chr3:93862152-93862171 | MsG0380017237.01.T01:CDS | 65.0% | |
| CTCCGGAGGAGAGTTTCGGG+GGG | + | Chr3:93862157-93862176 | None:intergenic | 65.0% | |
| GCCGGCCACTCAGAAAGCAG+TGG | - | Chr3:93863896-93863915 | MsG0380017237.01.T01:CDS | 65.0% | |
| GCTTTCTGAGTGGCCGGCAC+TGG | + | Chr3:93863894-93863913 | None:intergenic | 65.0% | |
| TGCGGTGAGGGATGAGGCGA+GGG | - | Chr3:93862672-93862691 | MsG0380017237.01.T01:CDS | 65.0% | |
| TGTAACCTCCGCGGCATCCG+TGG | - | Chr3:93862226-93862245 | MsG0380017237.01.T01:CDS | 65.0% | |
| TTGCGGTGAGGGATGAGGCG+AGG | - | Chr3:93862671-93862690 | MsG0380017237.01.T01:CDS | 65.0% | |
| ! | CGGTCTTTGGGGGGTGGAGA+TGG | - | Chr3:93863354-93863373 | MsG0380017237.01.T01:CDS | 65.0% |
| !! | GAGTTTCGGGGGGAGTGTCG+GGG | + | Chr3:93862147-93862166 | None:intergenic | 65.0% |
| !! | GGGGAGTGTCGGGGACAACA+TGG | + | Chr3:93862138-93862157 | None:intergenic | 65.0% |
| !! | GGGTGGAGATGGTGGAGAGG+TGG | - | Chr3:93863365-93863384 | MsG0380017237.01.T01:CDS | 65.0% |
| CTCCGCGGCATCCGTGGTAC+CGG | - | Chr3:93862232-93862251 | MsG0380017237.01.T01:CDS | 70.0% | |
| CTCGATGGCGACCCCAGTGC+CGG | - | Chr3:93863878-93863897 | MsG0380017237.01.T01:CDS | 70.0% | |
| GAGGGATGAGGCGAGGGCTG+CGG | - | Chr3:93862678-93862697 | MsG0380017237.01.T01:CDS | 70.0% | |
| GGCTGCGGCGAGGGCTAAGA+GGG | - | Chr3:93862693-93862712 | MsG0380017237.01.T01:CDS | 70.0% | |
| TGCCGGTACCACGGATGCCG+CGG | + | Chr3:93862237-93862256 | None:intergenic | 70.0% | |
| !! | GGGGGGTGGAGATGGTGGAG+AGG | - | Chr3:93863362-93863381 | MsG0380017237.01.T01:CDS | 70.0% |
| ATGAGGCGAGGGCTGCGGCG+AGG | - | Chr3:93862683-93862702 | MsG0380017237.01.T01:CDS | 75.0% | |
| CGGTACCACGGATGCCGCGG+AGG | + | Chr3:93862234-93862253 | None:intergenic | 75.0% | |
| GGGCTGCGGCGAGGGCTAAG+AGG | - | Chr3:93862692-93862711 | MsG0380017237.01.T01:CDS | 75.0% | |
| TGAGGCGAGGGCTGCGGCGA+GGG | - | Chr3:93862684-93862703 | MsG0380017237.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 93862085 | 93864082 | 93862085 | ID=MsG0380017237.01;Name=MsG0380017237.01 |
| Chr3 | mRNA | 93862085 | 93864082 | 93862085 | ID=MsG0380017237.01.T01;Parent=MsG0380017237.01;Name=MsG0380017237.01.T01;_AED=0.14;_eAED=0.14;_QI=0|-1|0|1|-1|1|1|0|665 |
| Chr3 | exon | 93862085 | 93864082 | 93862085 | ID=MsG0380017237.01.T01:exon:1463;Parent=MsG0380017237.01.T01 |
| Chr3 | CDS | 93862085 | 93864082 | 93862085 | ID=MsG0380017237.01.T01:cds;Parent=MsG0380017237.01.T01 |
| Gene Sequence |
| Protein sequence |
