AlfalfaGEDB | MsG0480023606.01

M. sativa cultivar ZhongmuNo.1 / MsG0480023606.01

KEGG: -
GO: -
PFAM: PF00314

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023606.01.T01	RHN43304.1	97.273	110	3	0	38	147	109	218	1.76E-72	226

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023606.01.T01	P27357	60.714	112	38	3	38	147	66	173	2.09E-39	134

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023606.01.T01	A0A396GUY5	97.273	110	3	0	38	147	109	218	8.39e-73	226

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048256.01	MsG0480023606.01	0.803273	3.771721e-49	1.887308e-46
MsG0180001614.01	MsG0480023606.01	-0.814700	1.348150e-51	9.110113e-49
MsG0180004058.01	MsG0480023606.01	0.815930	7.180888e-52	5.017921e-49
MsG0180004777.01	MsG0480023606.01	0.810942	8.970064e-51	5.480671e-48
MsG0180004852.01	MsG0480023606.01	-0.802215	6.236122e-49	3.037372e-46
MsG0180005542.01	MsG0480023606.01	0.803687	3.095681e-49	1.565614e-46
MsG0480021117.01	MsG0480023606.01	0.840433	8.720205e-58	1.241918e-54
MsG0480021314.01	MsG0480023606.01	-0.808716	2.701137e-50	1.555599e-47
MsG0480022610.01	MsG0480023606.01	0.821506	3.894208e-53	3.173974e-50
MsG0480023264.01	MsG0480023606.01	-0.829325	5.484290e-55	5.595307e-52
MsG0480023298.01	MsG0480023606.01	-0.802223	6.213583e-49	3.027022e-46
MsG0480023606.01	MsG0480023693.01	0.806513	7.933134e-50	4.314116e-47
MsG0480023606.01	MsG0580026492.01	0.824894	6.303703e-54	5.657715e-51
MsG0480023606.01	MsG0680030719.01	0.843530	1.324017e-58	2.077469e-55
MsG0480023606.01	MsG0680034255.01	0.802406	5.695753e-49	2.787901e-46
MsG0480023606.01	MsG0680034316.01	0.875136	3.907065e-68	1.804657e-64
MsG0480023606.01	MsG0680034317.01	0.852652	4.009907e-61	8.437000e-58
MsG0480023606.01	MsG0780039873.01	-0.813578	2.384772e-51	1.563286e-48
MsG0480023606.01	MsG0780040321.01	-0.832092	1.151506e-55	1.273916e-52
MsG0480023606.01	MsG0780041501.01	0.855845	4.798981e-62	1.123064e-58
MsG0480023606.01	MsG0880043472.01	0.805250	1.461500e-49	7.694551e-47
MsG0480023606.01	MsG0880044968.01	-0.808653	2.786129e-50	1.601928e-47
MsG0480023606.01	MsG0880047211.01	0.820588	6.335416e-53	5.033412e-50
MsG0380015009.01	MsG0480023606.01	0.815729	7.963059e-52	5.534541e-49
MsG0380015369.01	MsG0480023606.01	0.825663	4.145809e-54	3.803202e-51
MsG0380015416.01	MsG0480023606.01	0.913799	4.045487e-84	9.739821e-80
MsG0380016896.01	MsG0480023606.01	-0.804951	1.688013e-49	8.819974e-47
MsG0380017141.01	MsG0480023606.01	-0.810585	1.071265e-50	6.482838e-48
MsG0380017237.01	MsG0480023606.01	0.806066	9.850747e-50	5.296365e-47
MsG0380017610.01	MsG0480023606.01	0.852405	4.715790e-61	9.843513e-58
MsG0380018070.01	MsG0480023606.01	0.821914	3.133655e-53	2.583937e-50
MsG0280009518.01	MsG0480023606.01	-0.806651	7.418753e-50	4.048315e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023606.01.T01	MTR_8g096910	97.273	110	3	0	38	147	67	176	2.68e-76	224
MsG0480023606.01.T01	MTR_8g096920	83.636	110	18	0	38	147	64	173	1.63e-64	194
MsG0480023606.01.T01	MTR_8g096900	43.312	157	42	2	38	147	92	248	8.57e-36	124
MsG0480023606.01.T01	MTR_5g010635	42.405	158	43	2	38	147	68	225	5.96e-33	116
MsG0480023606.01.T01	MTR_5g010640	48.913	92	45	1	38	127	70	161	3.83e-24	94.0
MsG0480023606.01.T01	MTR_2g067990	37.908	153	51	5	38	147	71	222	5.81e-22	91.3
MsG0480023606.01.T01	MTR_8g107140	53.731	67	28	2	38	103	78	142	3.54e-19	80.9
MsG0480023606.01.T01	MTR_5g022350	33.133	166	54	7	38	147	79	243	3.73e-18	79.3
MsG0480023606.01.T01	MTR_6g079580	52.239	67	29	2	38	103	73	137	4.02e-18	78.2
MsG0480023606.01.T01	MTR_5g022350	43.678	87	40	4	27	105	127	212	8.42e-18	77.0
MsG0480023606.01.T01	MTR_3g068015	43.810	105	52	6	38	135	79	183	1.20e-17	77.0
MsG0480023606.01.T01	MTR_8g075550	44.144	111	49	5	38	135	79	189	1.44e-17	77.4
MsG0480023606.01.T01	MTR_3g111620	49.275	69	34	1	38	105	78	146	2.65e-17	75.9
MsG0480023606.01.T01	MTR_8g075510	32.335	167	55	6	38	147	79	244	3.43e-17	75.9
MsG0480023606.01.T01	MTR_8g036215	44.330	97	46	5	38	128	71	165	7.66e-17	74.7
MsG0480023606.01.T01	MTR_1g025420	55.385	65	27	2	38	100	74	138	1.14e-16	75.1
MsG0480023606.01.T01	MTR_8g037890	50.746	67	31	2	38	102	77	143	1.27e-16	75.1
MsG0480023606.01.T01	MTR_1g025420	55.385	65	27	2	38	100	74	138	1.39e-16	74.3
MsG0480023606.01.T01	MTR_8g075510	54.545	66	27	3	38	101	79	143	1.58e-16	74.7
MsG0480023606.01.T01	MTR_1g021945	50.000	70	33	1	38	105	77	146	1.73e-16	73.9
MsG0480023606.01.T01	MTR_3g114030	53.846	65	28	2	38	100	58	122	1.95e-16	73.6
MsG0480023606.01.T01	MTR_4g073720	48.193	83	34	4	26	100	58	139	2.26e-16	74.7
MsG0480023606.01.T01	MTR_8g056820	50.769	65	30	1	38	100	77	141	5.06e-16	72.8
MsG0480023606.01.T01	MTR_5g059200	39.048	105	51	3	38	135	77	175	6.90e-16	72.8
MsG0480023606.01.T01	MTR_7g062610	40.385	104	56	5	38	135	74	177	1.69e-15	71.2
MsG0480023606.01.T01	MTR_2g067980	32.749	171	53	8	38	147	78	247	3.16e-15	72.0
MsG0480023606.01.T01	MTR_4g073730	43.478	92	41	4	30	110	62	153	3.52e-15	70.9
MsG0480023606.01.T01	MTR_4g073730	43.478	92	41	4	30	110	62	153	4.36e-15	70.9
MsG0480023606.01.T01	MTR_5g022310	50.000	66	29	2	38	100	77	141	2.65e-14	68.2
MsG0480023606.01.T01	MTR_5g022310	50.000	66	29	2	38	100	77	141	2.98e-14	68.6
MsG0480023606.01.T01	MTR_2g069660	30.409	171	58	6	38	147	73	243	4.64e-14	67.4
MsG0480023606.01.T01	MTR_2g068655	30.814	172	56	8	38	147	82	252	6.98e-14	67.4
MsG0480023606.01.T01	MTR_7g102380	30.994	171	56	7	38	147	72	241	6.17e-13	64.3
MsG0480023606.01.T01	MTR_1g062350	36.283	113	59	6	38	146	73	176	4.48e-12	62.0
MsG0480023606.01.T01	MTR_5g023850	31.655	139	65	6	38	147	79	216	1.40e-11	60.5
MsG0480023606.01.T01	MTR_6g009480	46.970	66	32	3	38	100	80	145	1.92e-11	60.5
MsG0480023606.01.T01	MTR_1g062370	34.513	113	61	6	38	146	73	176	2.05e-11	60.1
MsG0480023606.01.T01	MTR_1g062340	49.231	65	30	3	38	100	73	136	2.53e-11	59.7
MsG0480023606.01.T01	MTR_2g068030	39.048	105	57	5	38	135	75	179	3.64e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023606.01.T01	AT4G11650	41.304	184	49	4	12	147	51	223	5.58e-36	124
MsG0480023606.01.T01	AT1G77700	58.730	63	23	1	38	100	109	168	9.14e-22	89.4
MsG0480023606.01.T01	AT1G77700	43.137	102	51	3	38	135	109	207	1.56e-21	88.6
MsG0480023606.01.T01	AT1G77700	58.730	63	23	1	38	100	137	196	1.56e-21	89.0
MsG0480023606.01.T01	AT1G75050	57.143	63	27	0	38	100	75	137	5.53e-20	83.2
MsG0480023606.01.T01	AT1G75030	45.161	93	42	3	17	100	45	137	1.12e-19	82.4
MsG0480023606.01.T01	AT1G18250	59.091	66	24	2	38	102	73	136	4.59e-19	80.9
MsG0480023606.01.T01	AT1G18250	59.091	66	24	2	38	102	72	135	5.34e-19	80.5
MsG0480023606.01.T01	AT4G38660	49.398	83	33	4	26	100	63	144	1.13e-18	80.9
MsG0480023606.01.T01	AT4G38660	49.398	83	33	4	26	100	41	122	1.39e-18	80.5
MsG0480023606.01.T01	AT1G75040	42.241	116	56	4	30	135	60	174	1.43e-18	79.3
MsG0480023606.01.T01	AT1G75800	52.564	78	29	3	31	100	61	138	3.72e-18	79.3
MsG0480023606.01.T01	AT1G73620	54.545	66	27	2	38	102	93	156	1.96e-17	76.6
MsG0480023606.01.T01	AT4G36010	59.091	66	24	3	38	100	74	139	5.08e-17	75.9
MsG0480023606.01.T01	AT4G36010	59.091	66	24	3	38	100	74	139	5.08e-17	75.9
MsG0480023606.01.T01	AT5G24620	43.750	96	46	4	38	125	152	247	1.33e-16	75.9
MsG0480023606.01.T01	AT5G24620	43.750	96	46	4	38	125	131	226	1.34e-16	75.9
MsG0480023606.01.T01	AT5G24620	45.882	85	42	3	38	120	76	158	1.54e-16	75.5
MsG0480023606.01.T01	AT1G20030	53.846	65	28	2	38	100	54	118	4.80e-16	73.6
MsG0480023606.01.T01	AT1G20030	53.846	65	28	2	38	100	71	135	5.69e-16	73.2
MsG0480023606.01.T01	AT5G02140	37.963	108	60	4	38	138	72	179	3.78e-15	70.9
MsG0480023606.01.T01	AT2G17860	54.545	66	27	3	38	100	74	139	4.71e-15	70.1
MsG0480023606.01.T01	AT5G02140	37.963	108	60	4	38	138	72	179	5.11e-15	69.7
MsG0480023606.01.T01	AT1G19320	47.887	71	32	3	38	103	76	146	6.33e-15	69.7
MsG0480023606.01.T01	AT4G38670	56.061	66	26	3	38	100	74	139	6.85e-15	70.1
MsG0480023606.01.T01	AT4G38670	56.061	66	26	3	38	100	74	139	6.85e-15	70.1
MsG0480023606.01.T01	AT5G38280	50.769	65	30	2	38	100	76	140	7.20e-15	70.9
MsG0480023606.01.T01	AT5G38280	50.769	65	30	2	38	100	76	140	7.36e-15	70.9
MsG0480023606.01.T01	AT4G38670	56.061	66	26	3	38	100	58	123	7.70e-15	69.7
MsG0480023606.01.T01	AT5G40020	33.663	101	55	4	38	129	79	176	9.20e-13	63.9
MsG0480023606.01.T01	AT4G24180	45.070	71	31	4	38	100	84	154	1.61e-12	63.9
MsG0480023606.01.T01	AT4G24180	40.000	85	43	4	38	114	79	163	1.68e-12	63.5
MsG0480023606.01.T01	AT4G24180	45.070	71	31	4	38	100	84	154	1.84e-12	63.2
MsG0480023606.01.T01	AT4G24180	45.070	71	31	4	38	100	79	149	1.87e-12	63.2
MsG0480023606.01.T01	AT4G24180	45.070	71	31	4	38	100	84	154	1.91e-12	63.5
MsG0480023606.01.T01	AT4G24180	45.070	71	31	4	38	100	79	149	2.10e-12	63.5
MsG0480023606.01.T01	AT2G28790	36.559	93	54	4	29	117	95	186	4.16e-11	59.7
MsG0480023606.01.T01	AT2G28790	36.559	93	54	4	29	117	70	161	6.06e-11	58.9

Find 64 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTTAACGGTGGAAACAATT+TGG	0.203853	4:-87569917	MsG0480023606.01.T01:CDS
GGAACCTCAGCTGCCCGAAT+TGG	0.236280	4:-87570059	MsG0480023606.01.T01:CDS
CAATTTAGTTCAACTTCTAA+TGG	0.270728	4:-87569850	MsG0480023606.01.T01:CDS
CAACCGGTTCGGCCCCAATT+CGG	0.307973	4:+87570045	None:intergenic
GAACCTCAGCTGCCCGAATT+GGG	0.331055	4:-87570058	MsG0480023606.01.T01:CDS
AGGTTCCTGCTGGGACGTCT+AGG	0.373429	4:+87570075	None:intergenic
GGTTGCAGATTTGACGGTTC+AGG	0.391606	4:-87570027	MsG0480023606.01.T01:CDS
ATTGATATATCCGTGATTGA+TGG	0.392044	4:-87569889	MsG0480023606.01.T01:CDS
CGGGCAGCTGAGGTTCCTGC+TGG	0.395365	4:+87570065	None:intergenic
TGGCGGTCGGCAGTTGAACT+CGG	0.398070	4:-87570111	MsG0480023606.01.T01:CDS
AACCGGTTCGGCCCCAATTC+GGG	0.415920	4:+87570046	None:intergenic
CAACTGCCGACCGCCACCCC+TGG	0.416174	4:+87570118	None:intergenic
GGACGTCTAGGGCCCATGTT+TGG	0.422664	4:+87570087	None:intergenic
GCCCTCAGTTGCAGCGTATC+CGG	0.424143	4:-87569970	MsG0480023606.01.T01:CDS
TGCCCGAATTGGGGCCGAAC+CGG	0.429410	4:-87570048	MsG0480023606.01.T01:CDS
TGTGGCCAGCAGGCATTCCC+AGG	0.432973	4:-87570136	MsG0480023606.01.T01:CDS
CTTGCAGAATACACACTTAA+CGG	0.444433	4:-87569931	MsG0480023606.01.T01:CDS
GAAGTTGAACTAAATTGCAT+TGG	0.446469	4:+87569856	None:intergenic
TTGGGTTGATGATAAGCGTC+AGG	0.449898	4:+87569790	None:intergenic
CCACCCCTGGGAATGCCTGC+TGG	0.453658	4:+87570131	None:intergenic
TCCTACACCGTGTGGCCAGC+AGG	0.465020	4:-87570146	MsG0480023606.01.T01:CDS
GCAAAAGACAATTCTATAGT+TGG	0.465056	4:+87569735	None:intergenic
AGTTGAACTCGGGCCAAACA+TGG	0.469395	4:-87570100	MsG0480023606.01.T01:CDS
GGTTCCTGCTGGGACGTCTA+GGG	0.477500	4:+87570076	None:intergenic
AACTGCCGACCGCCACCCCT+GGG	0.478248	4:+87570119	None:intergenic
GGCCGTGGTAGTTGTCAAAC+CGG	0.480258	4:-87570006	MsG0480023606.01.T01:CDS
ATTCTATAGTTGGTACCAGC+AGG	0.484718	4:+87569745	None:intergenic
TACCGGATACGCTGCAACTG+AGG	0.493865	4:+87569968	None:intergenic
CGAACCGGTTGCAGATTTGA+CGG	0.499446	4:-87570033	MsG0480023606.01.T01:CDS
CGTCAAATCTGCAACCGGTT+CGG	0.501459	4:+87570034	None:intergenic
GCATTCCCAGGGGTGGCGGT+CGG	0.503845	4:-87570124	MsG0480023606.01.T01:CDS
AAGTGTGGTCGGAGGTCTAC+CGG	0.507917	4:+87569951	None:intergenic
GCAGGCATTCCCAGGGGTGG+CGG	0.509045	4:-87570128	MsG0480023606.01.T01:CDS
GGCCCCAATTCGGGCAGCTG+AGG	0.515519	4:+87570055	None:intergenic
TGAACCGTCAAATCTGCAAC+CGG	0.519233	4:+87570029	None:intergenic
GTGGCCAGCAGGCATTCCCA+GGG	0.520424	4:-87570135	MsG0480023606.01.T01:CDS
GGCGGTCGGCAGTTGAACTC+GGG	0.524309	4:-87570110	MsG0480023606.01.T01:CDS
AGATTTGACGGTTCAGGCCG+TGG	0.534325	4:-87570021	MsG0480023606.01.T01:CDS
GCAACAAAGTACTAACCTGC+AGG	0.535215	4:-87569825	MsG0480023606.01.T01:CDS
CCAGCAGGCATTCCCAGGGG+TGG	0.535691	4:-87570131	MsG0480023606.01.T01:CDS
GAGGGCTCCACCGCAATCAC+CGG	0.545217	4:+87569987	None:intergenic
GCCACACGGTGTAGGAGCAT+CGG	0.549741	4:+87570153	None:intergenic
AACCTCAGCTGCCCGAATTG+GGG	0.552560	4:-87570057	MsG0480023606.01.T01:CDS
GGGCAGCTGAGGTTCCTGCT+GGG	0.554803	4:+87570066	None:intergenic
GGGAATGCCTGCTGGCCACA+CGG	0.556106	4:+87570139	None:intergenic
AAAACTGTTACATGCCCTGC+TGG	0.561280	4:-87569760	MsG0480023606.01.T01:CDS
ACCGGATACGCTGCAACTGA+GGG	0.582645	4:+87569969	None:intergenic
GTTGAACTCGGGCCAAACAT+GGG	0.584315	4:-87570099	MsG0480023606.01.T01:CDS
GCCTGCTGGCCACACGGTGT+AGG	0.587001	4:+87570145	None:intergenic
AGGGCAATTAGAATCCCTGC+AGG	0.610979	4:+87569810	None:intergenic
TGTCAAACCGGTGATTGCGG+TGG	0.620211	4:-87569994	MsG0480023606.01.T01:CDS
GTGTATTCTGCAAGTGTGGT+CGG	0.621122	4:+87569940	None:intergenic
TGGGCCCTAGACGTCCCAGC+AGG	0.625631	4:-87570080	MsG0480023606.01.T01:CDS
AATGTTGAAACCATCAATCA+CGG	0.630462	4:+87569879	None:intergenic
TTCTATAGTTGGTACCAGCA+GGG	0.634139	4:+87569746	None:intergenic
TGGGTTGATGATAAGCGTCA+GGG	0.653624	4:+87569791	None:intergenic
ACCGATGCTCCTACACCGTG+TGG	0.659283	4:-87570154	None:intergenic
CAACAAAGTACTAACCTGCA+GGG	0.664924	4:-87569824	MsG0480023606.01.T01:CDS
CACCGGTTTGACAACTACCA+CGG	0.669452	4:+87570004	None:intergenic
AGTTGTCAAACCGGTGATTG+CGG	0.672636	4:-87569997	MsG0480023606.01.T01:CDS
AAGTGTGTATTCTGCAAGTG+TGG	0.680757	4:+87569936	None:intergenic
TGGCCAGCAGGCATTCCCAG+GGG	0.692813	4:-87570134	MsG0480023606.01.T01:CDS
TATTCTGCAAGTGTGGTCGG+AGG	0.710918	4:+87569943	None:intergenic
GCAGAATACACACTTAACGG+TGG	0.731861	4:-87569928	MsG0480023606.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CAATTTAGTTCAACTTCTAA+TGG	-	Chr4:87570029-87570048	MsG0480023606.01.T01:CDS	25.0%
!!!	GTAACAGTTTTAACATCATT+GGG	+	Chr4:87570110-87570129	None:intergenic	25.0%
!!!	TGTAACAGTTTTAACATCAT+TGG	+	Chr4:87570111-87570130	None:intergenic	25.0%
	AATGTTGAAACCATCAATCA+CGG	+	Chr4:87570003-87570022	None:intergenic	30.0%
	ATTGATATATCCGTGATTGA+TGG	-	Chr4:87569990-87570009	MsG0480023606.01.T01:CDS	30.0%
	GAAGTTGAACTAAATTGCAT+TGG	+	Chr4:87570026-87570045	None:intergenic	30.0%
	GCAAAAGACAATTCTATAGT+TGG	+	Chr4:87570147-87570166	None:intergenic	30.0%
	ACTTAACGGTGGAAACAATT+TGG	-	Chr4:87569962-87569981	MsG0480023606.01.T01:CDS	35.0%
	CTTGCAGAATACACACTTAA+CGG	-	Chr4:87569948-87569967	MsG0480023606.01.T01:CDS	35.0%
	AAGTGTGTATTCTGCAAGTG+TGG	+	Chr4:87569946-87569965	None:intergenic	40.0%
!	ATTCTATAGTTGGTACCAGC+AGG	+	Chr4:87570137-87570156	None:intergenic	40.0%
!	CAACAAAGTACTAACCTGCA+GGG	-	Chr4:87570055-87570074	MsG0480023606.01.T01:CDS	40.0%
!	TTCTATAGTTGGTACCAGCA+GGG	+	Chr4:87570136-87570155	None:intergenic	40.0%
	AAAACTGTTACATGCCCTGC+TGG	-	Chr4:87570119-87570138	MsG0480023606.01.T01:CDS	45.0%
	AGTTGTCAAACCGGTGATTG+CGG	-	Chr4:87569882-87569901	MsG0480023606.01.T01:CDS	45.0%
	GCAGAATACACACTTAACGG+TGG	-	Chr4:87569951-87569970	MsG0480023606.01.T01:CDS	45.0%
	GTGTATTCTGCAAGTGTGGT+CGG	+	Chr4:87569942-87569961	None:intergenic	45.0%
	TGAACCGTCAAATCTGCAAC+CGG	+	Chr4:87569853-87569872	None:intergenic	45.0%
!	GCAACAAAGTACTAACCTGC+AGG	-	Chr4:87570054-87570073	MsG0480023606.01.T01:CDS	45.0%
!!	TGGGTTGATGATAAGCGTCA+GGG	+	Chr4:87570091-87570110	None:intergenic	45.0%
!!	TTGGGTTGATGATAAGCGTC+AGG	+	Chr4:87570092-87570111	None:intergenic	45.0%
	AGGGCAATTAGAATCCCTGC+AGG	+	Chr4:87570072-87570091	None:intergenic	50.0%
	AGTTGAACTCGGGCCAAACA+TGG	-	Chr4:87569779-87569798	MsG0480023606.01.T01:CDS	50.0%
	CGAACCGGTTGCAGATTTGA+CGG	-	Chr4:87569846-87569865	MsG0480023606.01.T01:CDS	50.0%
	CGTCAAATCTGCAACCGGTT+CGG	+	Chr4:87569848-87569867	None:intergenic	50.0%
	GGTTGCAGATTTGACGGTTC+AGG	-	Chr4:87569852-87569871	MsG0480023606.01.T01:CDS	50.0%
	GTTGAACTCGGGCCAAACAT+GGG	-	Chr4:87569780-87569799	MsG0480023606.01.T01:CDS	50.0%
	TATTCTGCAAGTGTGGTCGG+AGG	+	Chr4:87569939-87569958	None:intergenic	50.0%
!!	CACCGGTTTGACAACTACCA+CGG	+	Chr4:87569878-87569897	None:intergenic	50.0%
	AACCTCAGCTGCCCGAATTG+GGG	-	Chr4:87569822-87569841	MsG0480023606.01.T01:CDS	55.0%
	AAGTGTGGTCGGAGGTCTAC+CGG	+	Chr4:87569931-87569950	None:intergenic	55.0%
	ACCGGATACGCTGCAACTGA+GGG	+	Chr4:87569913-87569932	None:intergenic	55.0%
	AGATTTGACGGTTCAGGCCG+TGG	-	Chr4:87569858-87569877	MsG0480023606.01.T01:CDS	55.0%
	GAACCTCAGCTGCCCGAATT+GGG	-	Chr4:87569821-87569840	MsG0480023606.01.T01:CDS	55.0%
	GGCCGTGGTAGTTGTCAAAC+CGG	-	Chr4:87569873-87569892	MsG0480023606.01.T01:CDS	55.0%
	TACCGGATACGCTGCAACTG+AGG	+	Chr4:87569914-87569933	None:intergenic	55.0%
	TGTCAAACCGGTGATTGCGG+TGG	-	Chr4:87569885-87569904	MsG0480023606.01.T01:CDS	55.0%
	AGGTTCCTGCTGGGACGTCT+AGG	+	Chr4:87569807-87569826	None:intergenic	60.0%
	GCCCTCAGTTGCAGCGTATC+CGG	-	Chr4:87569909-87569928	MsG0480023606.01.T01:CDS	60.0%
	GGAACCTCAGCTGCCCGAAT+TGG	-	Chr4:87569820-87569839	MsG0480023606.01.T01:CDS	60.0%
	GGTTCCTGCTGGGACGTCTA+GGG	+	Chr4:87569806-87569825	None:intergenic	60.0%
	TGGCGGTCGGCAGTTGAACT+CGG	-	Chr4:87569768-87569787	MsG0480023606.01.T01:CDS	60.0%
!	GGACGTCTAGGGCCCATGTT+TGG	+	Chr4:87569795-87569814	None:intergenic	60.0%
!!	AACCGGTTCGGCCCCAATTC+GGG	+	Chr4:87569836-87569855	None:intergenic	60.0%
!!	CAACCGGTTCGGCCCCAATT+CGG	+	Chr4:87569837-87569856	None:intergenic	60.0%
	GAGGGCTCCACCGCAATCAC+CGG	+	Chr4:87569895-87569914	None:intergenic	65.0%
	GGCGGTCGGCAGTTGAACTC+GGG	-	Chr4:87569769-87569788	MsG0480023606.01.T01:CDS	65.0%
	GGGAATGCCTGCTGGCCACA+CGG	+	Chr4:87569743-87569762	None:intergenic	65.0%
	GGGCAGCTGAGGTTCCTGCT+GGG	+	Chr4:87569816-87569835	None:intergenic	65.0%
	GTGGCCAGCAGGCATTCCCA+GGG	-	Chr4:87569744-87569763	MsG0480023606.01.T01:CDS	65.0%
	TCCTACACCGTGTGGCCAGC+AGG	-	Chr4:87569733-87569752	MsG0480023606.01.T01:CDS	65.0%
	TGCCCGAATTGGGGCCGAAC+CGG	-	Chr4:87569831-87569850	MsG0480023606.01.T01:CDS	65.0%
	TGGCCAGCAGGCATTCCCAG+GGG	-	Chr4:87569745-87569764	MsG0480023606.01.T01:CDS	65.0%
	TGTGGCCAGCAGGCATTCCC+AGG	-	Chr4:87569743-87569762	MsG0480023606.01.T01:CDS	65.0%
	AACTGCCGACCGCCACCCCT+GGG	+	Chr4:87569763-87569782	None:intergenic	70.0%
	CCACCCCTGGGAATGCCTGC+TGG	+	Chr4:87569751-87569770	None:intergenic	70.0%
	CCAGCAGGCATTCCCAGGGG+TGG	-	Chr4:87569748-87569767	MsG0480023606.01.T01:CDS	70.0%
	CGGGCAGCTGAGGTTCCTGC+TGG	+	Chr4:87569817-87569836	None:intergenic	70.0%
	GCAGGCATTCCCAGGGGTGG+CGG	-	Chr4:87569751-87569770	MsG0480023606.01.T01:CDS	70.0%
	GCCTGCTGGCCACACGGTGT+AGG	+	Chr4:87569737-87569756	None:intergenic	70.0%
	GGCCCCAATTCGGGCAGCTG+AGG	+	Chr4:87569827-87569846	None:intergenic	70.0%
	TGGGCCCTAGACGTCCCAGC+AGG	-	Chr4:87569799-87569818	MsG0480023606.01.T01:CDS	70.0%
!	GCATTCCCAGGGGTGGCGGT+CGG	-	Chr4:87569755-87569774	MsG0480023606.01.T01:CDS	70.0%
	CAACTGCCGACCGCCACCCC+TGG	+	Chr4:87569764-87569783	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	87569729	87570172	87569729	ID=MsG0480023606.01;Name=MsG0480023606.01
Chr4	mRNA	87569729	87570172	87569729	ID=MsG0480023606.01.T01;Parent=MsG0480023606.01;Name=MsG0480023606.01.T01;_AED=0.42;_eAED=0.42;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|147
Chr4	exon	87569729	87570172	87569729	ID=MsG0480023606.01.T01:exon:1858;Parent=MsG0480023606.01.T01
Chr4	CDS	87569729	87570172	87569729	ID=MsG0480023606.01.T01:cds;Parent=MsG0480023606.01.T01

Gene Sequence

>MsG0480023606.01.T01

ATGCTCCTACACCGTGTGGCCAGCAGGCATTCCCAGGGGTGGCGGTCGGCAGTTGAACTCGGGCCAAACATGGGCCCTAGACGTCCCAGCAGGAACCTCAGCTGCCCGAATTGGGGCCGAACCGGTTGCAGATTTGACGGTTCAGGCCGTGGTAGTTGTCAAACCGGTGATTGCGGTGGAGCCCTCAGTTGCAGCGTATCCGGTAGACCTCCGACCACACTTGCAGAATACACACTTAACGGTGGAAACAATTTGGATTACATTGATATATCCGTGATTGATGGTTTCAACATTCCAATGCAATTTAGTTCAACTTCTAATGGATGCAACAAAGTACTAACCTGCAGGGATTCTAATTGCCCTGACGCTTATCATCAACCCAATGATGTTAAAACTGTTACATGCCCTGCTGGTACCAACTATAGAATTGTCTTTTGCCCTTGA

Protein sequence

>MsG0480023606.01.T01

MLLHRVASRHSQGWRSAVELGPNMGPRRPSRNLSCPNWGRTGCRFDGSGRGSCQTGDCGGALSCSVSGRPPTTLAEYTLNGGNNLDYIDISVIDGFNIPMQFSSTSNGCNKVLTCRDSNCPDAYHQPNDVKTVTCPAGTNYRIVFCP*