AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017470.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017470.01.T01 MTR_3g108010 59.234 444 32 7 230 532 336 771 4.95e-149 457
MsG0380017470.01.T01 MTR_3g108010 78.988 257 19 3 1 223 1 256 3.96e-117 373
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017470.01.T01 AT5G25520 28.337 487 143 16 122 414 129 603 8.12e-24 106
MsG0380017470.01.T01 AT5G25520 28.337 487 143 16 122 414 129 603 1.47e-23 105
MsG0380017470.01.T01 AT5G25520 28.337 487 143 16 122 414 129 603 1.47e-23 105
MsG0380017470.01.T01 AT5G25520 28.337 487 143 16 122 414 129 603 1.47e-23 105
MsG0380017470.01.T01 AT5G25520 28.337 487 143 16 122 414 129 603 1.47e-23 105
MsG0380017470.01.T01 AT5G25520 28.337 487 143 16 122 414 129 603 1.60e-23 105
MsG0380017470.01.T01 AT5G25520 28.337 487 143 16 122 414 129 603 1.84e-23 105
MsG0380017470.01.T01 AT5G11430 27.478 575 193 19 112 500 19 555 2.63e-23 104
MsG0380017470.01.T01 AT5G11430 27.478 575 193 19 112 500 19 555 2.63e-23 104
MsG0380017470.01.T01 AT5G11430 27.478 575 193 19 112 500 19 555 2.63e-23 104
MsG0380017470.01.T01 AT5G11430 27.846 571 196 19 112 500 19 555 3.38e-23 104
MsG0380017470.01.T01 AT5G11430 27.478 575 193 19 112 500 19 555 6.08e-23 103
MsG0380017470.01.T01 AT5G11430 27.478 575 193 19 112 500 19 555 6.08e-23 103
MsG0380017470.01.T01 AT2G25640 29.472 492 171 18 164 504 148 614 6.13e-23 103
MsG0380017470.01.T01 AT2G25640 29.472 492 171 18 164 504 148 614 8.30e-23 103

Find 151 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGAGGCATTCACCCTTAA+TGG 0.180993 3:-96634418 None:intergenic
TGGGGCAGCGCCGAATAATT+TGG 0.194477 3:+96632511 MsG0380017470.01.T01:CDS
GGTTGGAATGTCGAATAATT+TGG 0.214009 3:+96632250 MsG0380017470.01.T01:CDS
TTGCATCCGTGAAGAAATTT+TGG 0.231596 3:-96632669 None:intergenic
TGCAGGGAAATGGTCTTTCC+TGG 0.246517 3:+96633274 MsG0380017470.01.T01:CDS
ATATCGGAAGAGGATGTTTC+TGG 0.263043 3:+96634088 MsG0380017470.01.T01:CDS
AATCCTCATCAAATCCTTCT+AGG 0.269817 3:+96632690 MsG0380017470.01.T01:CDS
TAAAACTACAGTTCCCATTA+AGG 0.274672 3:+96634404 MsG0380017470.01.T01:CDS
ACAATTGGTGGAAGAAAGTT+AGG 0.290151 3:-96633986 None:intergenic
TCATGAAGGTGGTGGTAATA+TGG 0.292463 3:+96632448 MsG0380017470.01.T01:CDS
CCATCTGCCTTGTTCATTGT+AGG 0.303573 3:-96632314 None:intergenic
TGATTCCGTGTCGCAGAATC+AGG 0.310476 3:+96632367 MsG0380017470.01.T01:CDS
ACACCAGAGGTTTATCTTGC+TGG 0.317080 3:-96632909 None:intergenic
GGGGCAGCGCCGAATAATTT+GGG 0.318517 3:+96632512 MsG0380017470.01.T01:CDS
TTCCTGGGTATTATCTGATA+TGG 0.326995 3:+96633290 MsG0380017470.01.T01:CDS
TGTATCACTTGATGAATTCA+TGG 0.331012 3:+96634006 MsG0380017470.01.T01:CDS
GTCATGGAACATAGTTGTTC+TGG 0.343296 3:-96633567 None:intergenic
GAGCTATTGGCAGCATTGTT+TGG 0.345504 3:-96632946 None:intergenic
TGATGTGGCCCCAAATTATT+CGG 0.360796 3:-96632521 None:intergenic
CCATTAAGGGTGAATGCCTC+TGG 0.370352 3:+96634418 MsG0380017470.01.T01:CDS
CCTTCCACGTCCTTCTTAAC+CGG 0.371751 3:-96633804 None:intergenic
GAAACATCCTCTTCCGATAT+AGG 0.374045 3:-96634085 None:intergenic
GGCAACAATGGAACTTCCTT+CGG 0.379525 3:+96632568 MsG0380017470.01.T01:CDS
AAGGTTTACCACTTTCTAAT+CGG 0.379703 3:+96632417 MsG0380017470.01.T01:CDS
AAGCAGTCAGATGGCTCAAT+TGG 0.382307 3:+96632289 MsG0380017470.01.T01:CDS
GAACAAACAATCCATGCAAA+TGG 0.389806 3:+96632491 MsG0380017470.01.T01:CDS
TTCTGTTGTTCGAAGGCAAC+CGG 0.395563 3:+96633785 MsG0380017470.01.T01:CDS
GCCGAATGATTCACCCTAGA+AGG 0.396436 3:-96632704 None:intergenic
GAAAATTTACCTGTAGAGTC+TGG 0.396535 3:+96634055 MsG0380017470.01.T01:CDS
CATCAACCAAAATTTCTTCA+CGG 0.400309 3:+96632663 MsG0380017470.01.T01:CDS
CGGAGCAGTGTCAGCGGATG+CGG 0.416348 3:-96632989 None:intergenic
CAGAGGCATTCACCCTTAAT+GGG 0.418571 3:-96634417 None:intergenic
AGACATGGGTTCACCATTTG+AGG 0.420298 3:-96632393 None:intergenic
GCCATCAGGTGACATTTCCT+TGG 0.423504 3:-96634301 None:intergenic
ACTCAGAGAAAGGTTATGTT+TGG 0.428160 3:+96633534 MsG0380017470.01.T01:intron
AACAAACAATCCATGCAAAT+GGG 0.435166 3:+96632492 MsG0380017470.01.T01:CDS
TGCGGCATCCAAGGTCTTTG+TGG 0.437522 3:-96632629 None:intergenic
GGAGTCATTAGCCGCTGCTC+TGG 0.441488 3:+96632876 MsG0380017470.01.T01:CDS
ATCCAAGGTCTTTGTGGCGT+TGG 0.443364 3:-96632623 None:intergenic
CATGAAGGTGGTGGTAATAT+GGG 0.443612 3:+96632449 MsG0380017470.01.T01:CDS
CACCAGAGGTTTATCTTGCT+GGG 0.446182 3:-96632908 None:intergenic
TCCATTGTTGCCTTTCGCTT+AGG 0.451328 3:-96632557 None:intergenic
AAAACTACAGTTCCCATTAA+GGG 0.451699 3:+96634405 MsG0380017470.01.T01:CDS
GTTGGTTTCTCCCGCTTGCT+AGG 0.454899 3:-96632605 None:intergenic
AATGTCGAATAATTTGGTTT+CGG 0.455379 3:+96632256 MsG0380017470.01.T01:CDS
ATTATCTGATATGGACCATA+TGG 0.457465 3:+96633299 MsG0380017470.01.T01:CDS
GTCTGGAAAAGCACCTATAT+CGG 0.457511 3:+96634072 MsG0380017470.01.T01:CDS
GAATCAGTGGTTGAGATGTT+TGG 0.457703 3:-96634456 None:intergenic
TCGAAGGCAACCGGTTAAGA+AGG 0.458038 3:+96633794 MsG0380017470.01.T01:CDS
AATTTGATCCACAGAACATA+AGG 0.462185 3:-96634867 None:intergenic
CTGAATCATCTGAGAGTGTT+CGG 0.468302 3:+96632842 MsG0380017470.01.T01:CDS
GACACTGCTCCGGCAAAAGC+AGG 0.468491 3:+96633000 MsG0380017470.01.T01:CDS
GCAGGGAAATGGTCTTTCCT+GGG 0.474253 3:+96633275 MsG0380017470.01.T01:CDS
CCACCAGACACCTCTTCCAC+TGG 0.477435 3:-96633756 None:intergenic
GCAACAATGGAACTTCCTTC+GGG 0.477785 3:+96632569 MsG0380017470.01.T01:CDS
ACCAGCACACTGAGAGCTAT+TGG 0.477959 3:-96632959 None:intergenic
GAAGAGGATGTTTCTGGGGT+TGG 0.478160 3:+96634094 MsG0380017470.01.T01:CDS
CAGAATCAGGGAGCCTCAAA+TGG 0.479669 3:+96632380 MsG0380017470.01.T01:CDS
CTGCGGTCCCTTATGTTCTG+TGG 0.481301 3:+96634859 MsG0380017470.01.T01:CDS
TATCGGAAGAGGATGTTTCT+GGG 0.483610 3:+96634089 MsG0380017470.01.T01:CDS
TGCAGAGGAACTTGCTTCAA+AGG 0.483632 3:+96633590 MsG0380017470.01.T01:CDS
GCCAATAGCTCTCAGTGTGC+TGG 0.485014 3:+96632958 MsG0380017470.01.T01:CDS
CTGACATCATCTTGCTCACT+GGG 0.485598 3:-96634145 None:intergenic
AATTCATCAAGTGATACAAT+TGG 0.489442 3:-96634001 None:intergenic
CATGTTCTAGCTGAACTCAA+TGG 0.493002 3:+96634891 MsG0380017470.01.T01:CDS
TCGGCGCTGCCCCATTTGCA+TGG 0.495574 3:-96632502 None:intergenic
TTTAATGCAAGATTGTTAGC+AGG 0.497851 3:-96634816 None:intergenic
CGCATCCGCTGACACTGCTC+CGG 0.501646 3:+96632990 MsG0380017470.01.T01:CDS
AGCAAGTTCCTCTGCAGTCA+TGG 0.505183 3:-96633583 None:intergenic
GTTCCAGTGGAAGAGGTGTC+TGG 0.506455 3:+96633753 MsG0380017470.01.T01:CDS
AGCTCTCAACTCAGCGTCAT+CGG 0.511270 3:-96634337 None:intergenic
AAATTGGAACCTGAGGAAAC+AGG 0.513032 3:+96633365 MsG0380017470.01.T01:CDS
GATCATCAATGACCACCATA+TGG 0.513041 3:-96633314 None:intergenic
ACAATCTTGCATTAAATATG+TGG 0.514750 3:+96634823 MsG0380017470.01.T01:CDS
TGATTCAGTCTGAACCTTGG+AGG 0.516269 3:-96632827 None:intergenic
TGTTGATTAATTCTAATGGT+TGG 0.517188 3:+96632233 None:intergenic
AACCAACGCCACAAAGACCT+TGG 0.524538 3:+96632621 MsG0380017470.01.T01:CDS
ACTGACATCATCTTGCTCAC+TGG 0.525178 3:-96634146 None:intergenic
CAAACTCCACCTGTTTCCTC+AGG 0.525336 3:-96633374 None:intergenic
TTAGTCAGGAAAACGCATAA+AGG 0.527219 3:+96633696 MsG0380017470.01.T01:intron
TTAGAACCTTGCGGCATCCA+AGG 0.528544 3:-96632638 None:intergenic
CAGTGGTTGAGATGTTTGGC+TGG 0.529253 3:-96634452 None:intergenic
AGACAATGTTCCAGTGGAAG+AGG 0.529596 3:+96633746 MsG0380017470.01.T01:CDS
CACCCTAGAAGGATTTGATG+AGG 0.535937 3:-96632693 None:intergenic
TTGACTACATCAGGTTTGGA+AGG 0.537796 3:-96633834 None:intergenic
ATTAGCCGCTGCTCTGGCGT+TGG 0.541102 3:+96632882 MsG0380017470.01.T01:CDS
GAACAAGGCAGATGGCTCAA+TGG 0.547735 3:+96632322 MsG0380017470.01.T01:CDS
ATCCTCATCAAATCCTTCTA+GGG 0.549715 3:+96632691 MsG0380017470.01.T01:CDS
CTTTATAACACCTAGCAAGC+GGG 0.551248 3:+96632595 MsG0380017470.01.T01:CDS
ATTTGATCCACAGAACATAA+GGG 0.555664 3:-96634866 None:intergenic
ATCCCAGCAAGATAAACCTC+TGG 0.557371 3:+96632906 MsG0380017470.01.T01:CDS
CCACTCAACCGATTAGAAAG+TGG 0.557910 3:-96632425 None:intergenic
CAGTCGGCTTTGTGTCGGAT+CGG 0.558564 3:-96634269 None:intergenic
CCACTTTCTAATCGGTTGAG+TGG 0.559744 3:+96632425 MsG0380017470.01.T01:CDS
GTGGTAATATGGGAATGCAC+CGG 0.560382 3:+96632459 MsG0380017470.01.T01:CDS
GTCAGTAACAAGCAGTCAGA+TGG 0.566088 3:+96632280 MsG0380017470.01.T01:CDS
TCATCAAGTGATACAATTGG+TGG 0.569261 3:-96633998 None:intergenic
AAAAGCACCTATATCGGAAG+AGG 0.571422 3:+96634078 MsG0380017470.01.T01:CDS
GGCTCCCTGATTCTGCGACA+CGG 0.571948 3:-96632372 None:intergenic
AGATGATTCAGTCTGAACCT+TGG 0.572285 3:-96632830 None:intergenic
CATTAAGGGTGAATGCCTCT+GGG 0.572833 3:+96634419 MsG0380017470.01.T01:CDS
TCCTTGGTATGACCATCAGT+CGG 0.575618 3:-96634285 None:intergenic
GGATACCAACGCCAGAGCAG+CGG 0.579342 3:-96632887 None:intergenic
ACCATCAGTCGGCTTTGTGT+CGG 0.579894 3:-96634274 None:intergenic
TGGTAATATGGGAATGCACC+GGG 0.585574 3:+96632460 MsG0380017470.01.T01:CDS
AAGTGGTAAACCTTGAGACA+TGG 0.586017 3:-96632408 None:intergenic
GTCAGCAGCTCCTAAGCGAA+AGG 0.590441 3:+96632547 MsG0380017470.01.T01:CDS
TTGTCGTCGTTTGACACCAG+AGG 0.591105 3:-96632922 None:intergenic
AATGGTGAACCCATGTCTCA+AGG 0.593004 3:+96632398 MsG0380017470.01.T01:CDS
AGAGTGTTCGGTCAAAGATG+AGG 0.593031 3:+96632854 MsG0380017470.01.T01:CDS
TCCGACACAAAGCCGACTGA+TGG 0.596636 3:+96634273 MsG0380017470.01.T01:CDS
TAAGGGACCGCAGTAAATGT+AGG 0.597785 3:-96634849 None:intergenic
AAGGGTGAATGCCTCTGGGA+GGG 0.601209 3:+96634423 MsG0380017470.01.T01:CDS
GGGCAGCGCCGAATAATTTG+GGG 0.601417 3:+96632513 MsG0380017470.01.T01:CDS
GATTCCGTGTCGCAGAATCA+GGG 0.605428 3:+96632368 MsG0380017470.01.T01:CDS
ATTCTGCGACACGGAATCAG+TGG 0.606573 3:-96632363 None:intergenic
TCCTAAGCGAAAGGCAACAA+TGG 0.609440 3:+96632556 MsG0380017470.01.T01:CDS
AGTGGTAAACCTTGAGACAT+GGG 0.609871 3:-96632407 None:intergenic
TTGTTTGTTCTGCAATAACC+CGG 0.610019 3:-96632478 None:intergenic
ACCAAGGAAATGTCACCTGA+TGG 0.610903 3:+96634300 MsG0380017470.01.T01:CDS
AATCGGTTGAGTGGTCATGA+AGG 0.611439 3:+96632434 MsG0380017470.01.T01:CDS
GGAGCTGCTGACACTTGATG+TGG 0.614789 3:-96632536 None:intergenic
GAGTGTTCGGTCAAAGATGA+GGG 0.618535 3:+96632855 MsG0380017470.01.T01:CDS
ATCGGAAGAGGATGTTTCTG+GGG 0.619706 3:+96634090 MsG0380017470.01.T01:CDS
GCATAAAGGTGAATTTCAAG+TGG 0.620857 3:+96633710 MsG0380017470.01.T01:CDS
CAAAGACCTTGGATGCCGCA+AGG 0.627538 3:+96632632 MsG0380017470.01.T01:CDS
CCTACAATGAACAAGGCAGA+TGG 0.628189 3:+96632314 MsG0380017470.01.T01:CDS
GTTGATGAATTAGAACCTTG+CGG 0.630653 3:-96632647 None:intergenic
CAATTGGTGGAAGAAAGTTA+GGG 0.631364 3:-96633985 None:intergenic
ATCTGATATGGACCATATGG+TGG 0.636241 3:+96633302 MsG0380017470.01.T01:CDS
CCGGTTAAGAAGGACGTGGA+AGG 0.636942 3:+96633804 MsG0380017470.01.T01:CDS
GCTTTATAACACCTAGCAAG+CGG 0.641407 3:+96632594 MsG0380017470.01.T01:CDS
TGCAGAAGAGAGACATGGCA+AGG 0.641619 3:+96634371 MsG0380017470.01.T01:CDS
ACAAACAATCCATGCAAATG+GGG 0.658556 3:+96632493 MsG0380017470.01.T01:CDS
GCTGGAGCATTCCCTCCCAG+AGG 0.660534 3:-96634434 None:intergenic
ACATGAAGACAATGTTCCAG+TGG 0.663545 3:+96633740 MsG0380017470.01.T01:CDS
TTGAGTGGTCATGAAGGTGG+TGG 0.666324 3:+96632440 MsG0380017470.01.T01:CDS
GCCGACTGATGGTCATACCA+AGG 0.666588 3:+96634284 MsG0380017470.01.T01:CDS
CGGTTGAGTGGTCATGAAGG+TGG 0.668800 3:+96632437 MsG0380017470.01.T01:CDS
ATTGGAGCCTACAATGAACA+AGG 0.669472 3:+96632307 MsG0380017470.01.T01:CDS
TAAGGGTGAATGCCTCTGGG+AGG 0.673490 3:+96634422 MsG0380017470.01.T01:CDS
GTCCATATCAGATAATACCC+AGG 0.673886 3:-96633292 None:intergenic
GATGCTAATGACTGAATCAG+TGG 0.687042 3:-96634469 None:intergenic
GACACGGAATCAGTGGACAC+AGG 0.688944 3:-96632356 None:intergenic
ACAGTTGAAAGAATCCTCCA+AGG 0.690663 3:+96632813 MsG0380017470.01.T01:CDS
GGTGTTATAAAGCTACCCGA+AGG 0.693467 3:-96632584 None:intergenic
CCAGTGGAAGAGGTGTCTGG+TGG 0.701730 3:+96633756 MsG0380017470.01.T01:CDS
GCAACCGGTTAAGAAGGACG+TGG 0.703337 3:+96633800 MsG0380017470.01.T01:CDS
TTTCATGCAGAAGAGAGACA+TGG 0.704859 3:+96634366 MsG0380017470.01.T01:CDS
GTGGCATCCTACATTTACTG+CGG 0.727219 3:+96634842 MsG0380017470.01.T01:CDS
ACTATGTTCCATGACTGCAG+AGG 0.739855 3:+96633575 MsG0380017470.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTACAATAGAGAAAAAT+TGG + Chr3:96633349-96633368 MsG0380017470.01.T01:CDS 20.0%
!! GAATAAGAAATACAAAGAAA+GGG + Chr3:96633472-96633491 MsG0380017470.01.T01:intron 20.0%
!! TATGAAGATGTAATAAAAAC+TGG - Chr3:96634519-96634538 None:intergenic 20.0%
!! TGAATAAGAAATACAAAGAA+AGG + Chr3:96633471-96633490 MsG0380017470.01.T01:intron 20.0%
!!! AATTTTTCTCTATTGTAGTT+TGG - Chr3:96633350-96633369 None:intergenic 20.0%
!!! ATTCTGATTTTTAGAATTTG+AGG - Chr3:96632791-96632810 None:intergenic 20.0%
! AATTCATCAAGTGATACAAT+TGG - Chr3:96634004-96634023 None:intergenic 25.0%
! ACAAAAAAACTATCACTGAA+AGG - Chr3:96633240-96633259 None:intergenic 25.0%
! ACAATCTTGCATTAAATATG+TGG + Chr3:96634823-96634842 MsG0380017470.01.T01:CDS 25.0%
! GTGAAAGATCAATAATATCA+TGG + Chr3:96634645-96634664 MsG0380017470.01.T01:intron 25.0%
! TCTTAAACTGTATACAAAAG+AGG + Chr3:96634623-96634642 MsG0380017470.01.T01:intron 25.0%
!! AATGTCGAATAATTTGGTTT+CGG + Chr3:96632256-96632275 MsG0380017470.01.T01:CDS 25.0%
!! TCTACAGGTAAATTTTCAAA+CGG - Chr3:96634052-96634071 None:intergenic 25.0%
!!! AGTCATTTTGTCACAATATT+CGG - Chr3:96634572-96634591 None:intergenic 25.0%
!!! GGCTTTTTTCAGATTTTATT+TGG + Chr3:96634765-96634784 MsG0380017470.01.T01:intron 25.0%
AAAAAAGTTAATGCTGATGC+AGG + Chr3:96634213-96634232 MsG0380017470.01.T01:intron 30.0%
AAAAAGTTAATGCTGATGCA+GGG + Chr3:96634214-96634233 MsG0380017470.01.T01:intron 30.0%
AAAACCTAAGGATTATCAAG+AGG + Chr3:96633126-96633145 MsG0380017470.01.T01:intron 30.0%
AAAACTACAGTTCCCATTAA+GGG + Chr3:96634405-96634424 MsG0380017470.01.T01:CDS 30.0%
AAACCTAAGGATTATCAAGA+GGG + Chr3:96633127-96633146 MsG0380017470.01.T01:intron 30.0%
AACAAACAATCCATGCAAAT+GGG + Chr3:96632492-96632511 MsG0380017470.01.T01:CDS 30.0%
AAGGTTTACCACTTTCTAAT+CGG + Chr3:96632417-96632436 MsG0380017470.01.T01:CDS 30.0%
AATTTGATCCACAGAACATA+AGG - Chr3:96634870-96634889 None:intergenic 30.0%
AGACTGAAAATCTTGCTTAT+CGG - Chr3:96633191-96633210 None:intergenic 30.0%
AGTATTCCAACCATATACAA+GGG + Chr3:96634673-96634692 MsG0380017470.01.T01:intron 30.0%
ATCATTGGAAGAAATGGTAA+TGG - Chr3:96633915-96633934 None:intergenic 30.0%
ATTACCATTTCTTCCAATGA+TGG + Chr3:96633914-96633933 MsG0380017470.01.T01:intron 30.0%
ATTATCTGATATGGACCATA+TGG + Chr3:96633299-96633318 MsG0380017470.01.T01:CDS 30.0%
ATTTGATCCACAGAACATAA+GGG - Chr3:96634869-96634888 None:intergenic 30.0%
CATCAACCAAAATTTCTTCA+CGG + Chr3:96632663-96632682 MsG0380017470.01.T01:CDS 30.0%
CTAATATCAACATCTGAATC+AGG - Chr3:96633672-96633691 None:intergenic 30.0%
GTGTAAAAGAAAAACACAAG+CGG + Chr3:96632732-96632751 MsG0380017470.01.T01:intron 30.0%
TAAAACTACAGTTCCCATTA+AGG + Chr3:96634404-96634423 MsG0380017470.01.T01:CDS 30.0%
TAGTATTCCAACCATATACA+AGG + Chr3:96634672-96634691 MsG0380017470.01.T01:intron 30.0%
TGTATCACTTGATGAATTCA+TGG + Chr3:96634006-96634025 MsG0380017470.01.T01:CDS 30.0%
TTACCATTTCTTCCAATGAT+GGG + Chr3:96633915-96633934 MsG0380017470.01.T01:intron 30.0%
TTGATATTAGACGTTTAGTC+AGG + Chr3:96633682-96633701 MsG0380017470.01.T01:intron 30.0%
TTTAATGCAAGATTGTTAGC+AGG - Chr3:96634819-96634838 None:intergenic 30.0%
! AATGACTTTGGATGTGATTT+TGG + Chr3:96634700-96634719 MsG0380017470.01.T01:intron 30.0%
! TTCTCATTCTTTTATGCTCA+TGG + Chr3:96634744-96634763 MsG0380017470.01.T01:intron 30.0%
!! AGGTTTTTCTGAAAAACCTA+AGG + Chr3:96633114-96633133 MsG0380017470.01.T01:intron 30.0%
!!! TTTTTAGAATTTGAGGAACG+AGG - Chr3:96632784-96632803 None:intergenic 30.0%
AATCCTCATCAAATCCTTCT+AGG + Chr3:96632690-96632709 MsG0380017470.01.T01:CDS 35.0%
ACAAACAATCCATGCAAATG+GGG + Chr3:96632493-96632512 MsG0380017470.01.T01:CDS 35.0%
ACAATTGGTGGAAGAAAGTT+AGG - Chr3:96633989-96634008 None:intergenic 35.0%
ACTCAGAGAAAGGTTATGTT+TGG + Chr3:96633534-96633553 MsG0380017470.01.T01:intron 35.0%
ATAATCCTGAACTCAGAGAA+AGG + Chr3:96633524-96633543 MsG0380017470.01.T01:intron 35.0%
ATCCTCATCAAATCCTTCTA+GGG + Chr3:96632691-96632710 MsG0380017470.01.T01:CDS 35.0%
CAATTGGTGGAAGAAAGTTA+GGG - Chr3:96633988-96634007 None:intergenic 35.0%
CAGTCATTAGCATCTTCAAA+AGG + Chr3:96634478-96634497 MsG0380017470.01.T01:intron 35.0%
GAAAATTTACCTGTAGAGTC+TGG + Chr3:96634055-96634074 MsG0380017470.01.T01:CDS 35.0%
GAACAAACAATCCATGCAAA+TGG + Chr3:96632491-96632510 MsG0380017470.01.T01:CDS 35.0%
GCAAAAATTCTGTTGTTCGA+AGG + Chr3:96633778-96633797 MsG0380017470.01.T01:CDS 35.0%
GCATAAAGGTGAATTTCAAG+TGG + Chr3:96633710-96633729 MsG0380017470.01.T01:CDS 35.0%
GGTTGGAATGTCGAATAATT+TGG + Chr3:96632250-96632269 MsG0380017470.01.T01:CDS 35.0%
GTCATTACTACCCTTGTATA+TGG - Chr3:96634686-96634705 None:intergenic 35.0%
TACAAGGGTAGTAATGACTT+TGG + Chr3:96634688-96634707 MsG0380017470.01.T01:intron 35.0%
TAGAGAAAAATTGGAACCTG+AGG + Chr3:96633358-96633377 MsG0380017470.01.T01:CDS 35.0%
TCATCAAGTGATACAATTGG+TGG - Chr3:96634001-96634020 None:intergenic 35.0%
TGAGGAGTTCGATAAAATCA+AGG + Chr3:96633641-96633660 MsG0380017470.01.T01:intron 35.0%
TTACTACCCTTGTATATGGT+TGG - Chr3:96634682-96634701 None:intergenic 35.0%
TTAGTCAGGAAAACGCATAA+AGG + Chr3:96633696-96633715 MsG0380017470.01.T01:intron 35.0%
TTCCTGGGTATTATCTGATA+TGG + Chr3:96633290-96633309 MsG0380017470.01.T01:CDS 35.0%
TTGGATAGTACATCTACTGA+AGG + Chr3:96633094-96633113 MsG0380017470.01.T01:intron 35.0%
TTGTTTGTTCTGCAATAACC+CGG - Chr3:96632481-96632500 None:intergenic 35.0%
! AATCCCTCTTGATAATCCTT+AGG - Chr3:96633133-96633152 None:intergenic 35.0%
! ACAGGTAAATTTTCAAACGG+TGG - Chr3:96634049-96634068 None:intergenic 35.0%
! GTGAAAGATGAACTTTTGCA+GGG + Chr3:96633258-96633277 MsG0380017470.01.T01:CDS 35.0%
! GTTGATGAATTAGAACCTTG+CGG - Chr3:96632650-96632669 None:intergenic 35.0%
! TGTGAAAGATGAACTTTTGC+AGG + Chr3:96633257-96633276 MsG0380017470.01.T01:CDS 35.0%
! TTGCATCCGTGAAGAAATTT+TGG - Chr3:96632672-96632691 None:intergenic 35.0%
!! ACATTGCTTTTGACTACATC+AGG - Chr3:96633846-96633865 None:intergenic 35.0%
AAATTGGAACCTGAGGAAAC+AGG + Chr3:96633365-96633384 MsG0380017470.01.T01:CDS 40.0%
AAGTGGTAAACCTTGAGACA+TGG - Chr3:96632411-96632430 None:intergenic 40.0%
ACAGGTAAAGAGGAGTTAAC+AGG - Chr3:96633037-96633056 None:intergenic 40.0%
ACAGTTGAAAGAATCCTCCA+AGG + Chr3:96632813-96632832 MsG0380017470.01.T01:CDS 40.0%
ACATGAAGACAATGTTCCAG+TGG + Chr3:96633740-96633759 MsG0380017470.01.T01:CDS 40.0%
AGATGATTCAGTCTGAACCT+TGG - Chr3:96632833-96632852 None:intergenic 40.0%
AGTCCCATCATTGGAAGAAA+TGG - Chr3:96633921-96633940 None:intergenic 40.0%
AGTGGTAAACCTTGAGACAT+GGG - Chr3:96632410-96632429 None:intergenic 40.0%
ATATCGGAAGAGGATGTTTC+TGG + Chr3:96634088-96634107 MsG0380017470.01.T01:CDS 40.0%
ATCTGATATGGACCATATGG+TGG + Chr3:96633302-96633321 MsG0380017470.01.T01:CDS 40.0%
ATGCTAGAAGCTCAGGTAAA+GGG - Chr3:96633412-96633431 None:intergenic 40.0%
ATTGGAGCCTACAATGAACA+AGG + Chr3:96632307-96632326 MsG0380017470.01.T01:CDS 40.0%
CAGGATTATTGCGATCTTTC+AGG - Chr3:96633513-96633532 None:intergenic 40.0%
CATAACCTTTCTCTGAGTTC+AGG - Chr3:96633532-96633551 None:intergenic 40.0%
CTTTATAACACCTAGCAAGC+GGG + Chr3:96632595-96632614 MsG0380017470.01.T01:CDS 40.0%
GAAACATCCTCTTCCGATAT+AGG - Chr3:96634088-96634107 None:intergenic 40.0%
GAATCAGTGGTTGAGATGTT+TGG - Chr3:96634459-96634478 None:intergenic 40.0%
GATCATCAATGACCACCATA+TGG - Chr3:96633317-96633336 None:intergenic 40.0%
GATGCTAATGACTGAATCAG+TGG - Chr3:96634472-96634491 None:intergenic 40.0%
GCTTTATAACACCTAGCAAG+CGG + Chr3:96632594-96632613 MsG0380017470.01.T01:CDS 40.0%
GTCATGGAACATAGTTGTTC+TGG - Chr3:96633570-96633589 None:intergenic 40.0%
GTCCATATCAGATAATACCC+AGG - Chr3:96633295-96633314 None:intergenic 40.0%
TATCGGAAGAGGATGTTTCT+GGG + Chr3:96634089-96634108 MsG0380017470.01.T01:CDS 40.0%
TGATGTGGCCCCAAATTATT+CGG - Chr3:96632524-96632543 None:intergenic 40.0%
TGTTAACTCCTCTTTACCTG+TGG + Chr3:96633036-96633055 MsG0380017470.01.T01:intron 40.0%
TTGACTACATCAGGTTTGGA+AGG - Chr3:96633837-96633856 None:intergenic 40.0%
TTTCATGCAGAAGAGAGACA+TGG + Chr3:96634366-96634385 MsG0380017470.01.T01:CDS 40.0%
! CATGAAGGTGGTGGTAATAT+GGG + Chr3:96632449-96632468 MsG0380017470.01.T01:CDS 40.0%
! CATGTTCTAGCTGAACTCAA+TGG + Chr3:96634891-96634910 MsG0380017470.01.T01:CDS 40.0%
! GACAGATGATGATGCATTGA+AGG + Chr3:96633961-96633980 MsG0380017470.01.T01:intron 40.0%
! GATGAACTTTTGCAGGGAAA+TGG + Chr3:96633264-96633283 MsG0380017470.01.T01:CDS 40.0%
! GTGTTTTGCATCAGACAAGA+TGG - Chr3:96634241-96634260 None:intergenic 40.0%
! TCATGAAGGTGGTGGTAATA+TGG + Chr3:96632448-96632467 MsG0380017470.01.T01:CDS 40.0%
! TTGAGTTTAGAGCAGAGGAA+CGG - Chr3:96634547-96634566 None:intergenic 40.0%
!! AAAAGCACCTATATCGGAAG+AGG + Chr3:96634078-96634097 MsG0380017470.01.T01:CDS 40.0%
!! CTGAATCATCTGAGAGTGTT+CGG + Chr3:96632842-96632861 MsG0380017470.01.T01:CDS 40.0%
!! GAAGTTGACTTTTTGCCATC+AGG - Chr3:96634318-96634337 None:intergenic 40.0%
!! GACAAATTTCCTGCTTTTGC+CGG - Chr3:96633012-96633031 None:intergenic 40.0%
!! GCTTTTGACTACATCAGGTT+TGG - Chr3:96633841-96633860 None:intergenic 40.0%
!! GTCTGGAAAAGCACCTATAT+CGG + Chr3:96634072-96634091 MsG0380017470.01.T01:CDS 40.0%
!! TCCTTCTAGGGTGAATCATT+CGG + Chr3:96632703-96632722 MsG0380017470.01.T01:intron 40.0%
AAGCAGTCAGATGGCTCAAT+TGG + Chr3:96632289-96632308 MsG0380017470.01.T01:CDS 45.0%
AATCGGTTGAGTGGTCATGA+AGG + Chr3:96632434-96632453 MsG0380017470.01.T01:CDS 45.0%
AATGGTGAACCCATGTCTCA+AGG + Chr3:96632398-96632417 MsG0380017470.01.T01:CDS 45.0%
ACACCAGAGGTTTATCTTGC+TGG - Chr3:96632912-96632931 None:intergenic 45.0%
ACCAAGGAAATGTCACCTGA+TGG + Chr3:96634300-96634319 MsG0380017470.01.T01:CDS 45.0%
ACTATGTTCCATGACTGCAG+AGG + Chr3:96633575-96633594 MsG0380017470.01.T01:CDS 45.0%
ACTGACATCATCTTGCTCAC+TGG - Chr3:96634149-96634168 None:intergenic 45.0%
AGACAATGTTCCAGTGGAAG+AGG + Chr3:96633746-96633765 MsG0380017470.01.T01:CDS 45.0%
AGACATGGGTTCACCATTTG+AGG - Chr3:96632396-96632415 None:intergenic 45.0%
AGGAAACAGGTGGAGTTTGT+AGG + Chr3:96633378-96633397 MsG0380017470.01.T01:intron 45.0%
ATCCCAGCAAGATAAACCTC+TGG + Chr3:96632906-96632925 MsG0380017470.01.T01:CDS 45.0%
ATCCTTGATGCTAGAAGCTC+AGG - Chr3:96633419-96633438 None:intergenic 45.0%
ATGGGACTGATCCAATGGAA+GGG + Chr3:96633933-96633952 MsG0380017470.01.T01:intron 45.0%
CACCAGAGGTTTATCTTGCT+GGG - Chr3:96632911-96632930 None:intergenic 45.0%
CACCCTAGAAGGATTTGATG+AGG - Chr3:96632696-96632715 None:intergenic 45.0%
CATTAAGGGTGAATGCCTCT+GGG + Chr3:96634419-96634438 MsG0380017470.01.T01:CDS 45.0%
CATTGGATCAGTCCCATCAT+TGG - Chr3:96633930-96633949 None:intergenic 45.0%
CCACTCAACCGATTAGAAAG+TGG - Chr3:96632428-96632447 None:intergenic 45.0%
CCACTTTCTAATCGGTTGAG+TGG + Chr3:96632425-96632444 MsG0380017470.01.T01:CDS 45.0%
CCTACAATGAACAAGGCAGA+TGG + Chr3:96632314-96632333 MsG0380017470.01.T01:CDS 45.0%
CTGACATCATCTTGCTCACT+GGG - Chr3:96634148-96634167 None:intergenic 45.0%
GAGCTATTGGCAGCATTGTT+TGG - Chr3:96632949-96632968 None:intergenic 45.0%
GAGCTCTTCAAACTGTTTGG+AGG + Chr3:96633446-96633465 MsG0380017470.01.T01:intron 45.0%
GAGTGTTCGGTCAAAGATGA+GGG + Chr3:96632855-96632874 MsG0380017470.01.T01:CDS 45.0%
GATGCTAGAAGCTCAGGTAA+AGG - Chr3:96633413-96633432 None:intergenic 45.0%
GATTCCGTTGACCATGTGAT+GGG + Chr3:96633061-96633080 MsG0380017470.01.T01:intron 45.0%
GCAACAATGGAACTTCCTTC+GGG + Chr3:96632569-96632588 MsG0380017470.01.T01:CDS 45.0%
GCAGAGCTCTTCAAACTGTT+TGG + Chr3:96633443-96633462 MsG0380017470.01.T01:intron 45.0%
GGAAACAGGTGGAGTTTGTA+GGG + Chr3:96633379-96633398 MsG0380017470.01.T01:intron 45.0%
GGCAACAATGGAACTTCCTT+CGG + Chr3:96632568-96632587 MsG0380017470.01.T01:CDS 45.0%
GTCAGTAACAAGCAGTCAGA+TGG + Chr3:96632280-96632299 MsG0380017470.01.T01:CDS 45.0%
GTGGCATCCTACATTTACTG+CGG + Chr3:96634842-96634861 MsG0380017470.01.T01:CDS 45.0%
GTGGTAATATGGGAATGCAC+CGG + Chr3:96632459-96632478 MsG0380017470.01.T01:CDS 45.0%
TAAGGGACCGCAGTAAATGT+AGG - Chr3:96634852-96634871 None:intergenic 45.0%
TACCTGAGCTTCTAGCATCA+AGG + Chr3:96633414-96633433 MsG0380017470.01.T01:intron 45.0%
TCAAAGGAGCTTTCTGAGTG+AGG + Chr3:96633606-96633625 MsG0380017470.01.T01:intron 45.0%
TCCATTGTTGCCTTTCGCTT+AGG - Chr3:96632560-96632579 None:intergenic 45.0%
TCCTAAGCGAAAGGCAACAA+TGG + Chr3:96632556-96632575 MsG0380017470.01.T01:CDS 45.0%
TCCTTGGTATGACCATCAGT+CGG - Chr3:96634288-96634307 None:intergenic 45.0%
TCTGTCATAAGCCCTTCCAT+TGG - Chr3:96633947-96633966 None:intergenic 45.0%
TGATTCAGTCTGAACCTTGG+AGG - Chr3:96632830-96632849 None:intergenic 45.0%
TGATTCCGTTGACCATGTGA+TGG + Chr3:96633060-96633079 MsG0380017470.01.T01:intron 45.0%
TGGTAATATGGGAATGCACC+GGG + Chr3:96632460-96632479 MsG0380017470.01.T01:CDS 45.0%
TTATCGAACTCCTCAGCCTT+CGG - Chr3:96633636-96633655 None:intergenic 45.0%
TTCTCCCATCACATGGTCAA+CGG - Chr3:96633068-96633087 None:intergenic 45.0%
TTCTGTTGTTCGAAGGCAAC+CGG + Chr3:96633785-96633804 MsG0380017470.01.T01:CDS 45.0%
! AGAGTGTTCGGTCAAAGATG+AGG + Chr3:96632854-96632873 MsG0380017470.01.T01:CDS 45.0%
! ATCGGAAGAGGATGTTTCTG+GGG + Chr3:96634090-96634109 MsG0380017470.01.T01:CDS 45.0%
! CAATGATGGGACTGATCCAA+TGG + Chr3:96633928-96633947 MsG0380017470.01.T01:intron 45.0%
! CCATCTGCCTTGTTCATTGT+AGG - Chr3:96632317-96632336 None:intergenic 45.0%
! CGGATTTGAGTTTAGAGCAG+AGG - Chr3:96634552-96634571 None:intergenic 45.0%
! GGTGTTATAAAGCTACCCGA+AGG - Chr3:96632587-96632606 None:intergenic 45.0%
! TGCAGAGGAACTTGCTTCAA+AGG + Chr3:96633590-96633609 MsG0380017470.01.T01:CDS 45.0%
!! CAGAGGCATTCACCCTTAAT+GGG - Chr3:96634420-96634439 None:intergenic 45.0%
!! TTCTAGGGTGAATCATTCGG+CGG + Chr3:96632706-96632725 MsG0380017470.01.T01:intron 45.0%
AACAGGTGGAGTTTGTAGGG+AGG + Chr3:96633382-96633401 MsG0380017470.01.T01:intron 50.0%
AACCAACGCCACAAAGACCT+TGG + Chr3:96632621-96632640 MsG0380017470.01.T01:CDS 50.0%
ACACAAGCGGATAACACGTC+AGG + Chr3:96632745-96632764 MsG0380017470.01.T01:intron 50.0%
ACCAGCACACTGAGAGCTAT+TGG - Chr3:96632962-96632981 None:intergenic 50.0%
AGCAAGTTCCTCTGCAGTCA+TGG - Chr3:96633586-96633605 None:intergenic 50.0%
AGCTCTCAACTCAGCGTCAT+CGG - Chr3:96634340-96634359 None:intergenic 50.0%
AGTGCTCTTCTCCCATCACA+TGG - Chr3:96633075-96633094 None:intergenic 50.0%
ATCCAAGGTCTTTGTGGCGT+TGG - Chr3:96632626-96632645 None:intergenic 50.0%
ATTCTGCGACACGGAATCAG+TGG - Chr3:96632366-96632385 None:intergenic 50.0%
ATTTGAGGAACGAGGAGTCG+CGG - Chr3:96632776-96632795 None:intergenic 50.0%
CAAACTCCACCTGTTTCCTC+AGG - Chr3:96633377-96633396 None:intergenic 50.0%
CAGAATCAGGGAGCCTCAAA+TGG + Chr3:96632380-96632399 MsG0380017470.01.T01:CDS 50.0%
CAGTGGTTGAGATGTTTGGC+TGG - Chr3:96634455-96634474 None:intergenic 50.0%
CCATTAAGGGTGAATGCCTC+TGG + Chr3:96634418-96634437 MsG0380017470.01.T01:CDS 50.0%
CCTTCCACGTCCTTCTTAAC+CGG - Chr3:96633807-96633826 None:intergenic 50.0%
GAACAAGGCAGATGGCTCAA+TGG + Chr3:96632322-96632341 MsG0380017470.01.T01:CDS 50.0%
GATGGGACTGATCCAATGGA+AGG + Chr3:96633932-96633951 MsG0380017470.01.T01:intron 50.0%
GATTCCGTGTCGCAGAATCA+GGG + Chr3:96632368-96632387 MsG0380017470.01.T01:CDS 50.0%
GCAGGGAAATGGTCTTTCCT+GGG + Chr3:96633275-96633294 MsG0380017470.01.T01:CDS 50.0%
GCCATCAGGTGACATTTCCT+TGG - Chr3:96634304-96634323 None:intergenic 50.0%
GCCGAATGATTCACCCTAGA+AGG - Chr3:96632707-96632726 None:intergenic 50.0%
GCTTCAAAGCACAGATGCTG+AGG + Chr3:96634186-96634205 MsG0380017470.01.T01:intron 50.0%
GGAATCAGCCACAGGTAAAG+AGG - Chr3:96633047-96633066 None:intergenic 50.0%
TCGAAGGCAACCGGTTAAGA+AGG + Chr3:96633794-96633813 MsG0380017470.01.T01:CDS 50.0%
TGATTCCGTGTCGCAGAATC+AGG + Chr3:96632367-96632386 MsG0380017470.01.T01:CDS 50.0%
TGCAGAAGAGAGACATGGCA+AGG + Chr3:96634371-96634390 MsG0380017470.01.T01:CDS 50.0%
TGCAGGGAAATGGTCTTTCC+TGG + Chr3:96633274-96633293 MsG0380017470.01.T01:CDS 50.0%
TTAGAACCTTGCGGCATCCA+AGG - Chr3:96632641-96632660 None:intergenic 50.0%
TTCTGAGTGAGGATAGCCGA+AGG + Chr3:96633617-96633636 MsG0380017470.01.T01:intron 50.0%
TTGAGTGGTCATGAAGGTGG+TGG + Chr3:96632440-96632459 MsG0380017470.01.T01:CDS 50.0%
TTGGAACCTGAGGAAACAGG+TGG + Chr3:96633368-96633387 MsG0380017470.01.T01:intron 50.0%
TTGTCGTCGTTTGACACCAG+AGG - Chr3:96632925-96632944 None:intergenic 50.0%
! ACCATCAGTCGGCTTTGTGT+CGG - Chr3:96634277-96634296 None:intergenic 50.0%
! GGTGCTTTTCCAGACTCTAC+AGG - Chr3:96634067-96634086 None:intergenic 50.0%
!! CCAGAGGCATTCACCCTTAA+TGG - Chr3:96634421-96634440 None:intergenic 50.0%
!! GAAGAGGATGTTTCTGGGGT+TGG + Chr3:96634094-96634113 MsG0380017470.01.T01:CDS 50.0%
!! TGTGATGGGAGAAGAGCACT+TGG + Chr3:96633075-96633094 MsG0380017470.01.T01:intron 50.0%
AGGTGGAGTTTGTAGGGAGG+TGG + Chr3:96633385-96633404 MsG0380017470.01.T01:intron 55.0%
CAAAGACCTTGGATGCCGCA+AGG + Chr3:96632632-96632651 MsG0380017470.01.T01:CDS 55.0%
CCGGTTAAGAAGGACGTGGA+AGG + Chr3:96633804-96633823 MsG0380017470.01.T01:CDS 55.0%
CGGTTGAGTGGTCATGAAGG+TGG + Chr3:96632437-96632456 MsG0380017470.01.T01:CDS 55.0%
CTGCGGTCCCTTATGTTCTG+TGG + Chr3:96634859-96634878 MsG0380017470.01.T01:CDS 55.0%
GACACGGAATCAGTGGACAC+AGG - Chr3:96632359-96632378 None:intergenic 55.0%
GCAACCGGTTAAGAAGGACG+TGG + Chr3:96633800-96633819 MsG0380017470.01.T01:CDS 55.0%
GCCAATAGCTCTCAGTGTGC+TGG + Chr3:96632958-96632977 MsG0380017470.01.T01:CDS 55.0%
GCCGACTGATGGTCATACCA+AGG + Chr3:96634284-96634303 MsG0380017470.01.T01:CDS 55.0%
GGAGCTGCTGACACTTGATG+TGG - Chr3:96632539-96632558 None:intergenic 55.0%
GTCAGCAGCTCCTAAGCGAA+AGG + Chr3:96632547-96632566 MsG0380017470.01.T01:CDS 55.0%
TAAGGGTGAATGCCTCTGGG+AGG + Chr3:96634422-96634441 MsG0380017470.01.T01:CDS 55.0%
TCCGACACAAAGCCGACTGA+TGG + Chr3:96634273-96634292 MsG0380017470.01.T01:CDS 55.0%
TGCGGCATCCAAGGTCTTTG+TGG - Chr3:96632632-96632651 None:intergenic 55.0%
TGGTCAACGGAATCAGCCAC+AGG - Chr3:96633055-96633074 None:intergenic 55.0%
TTTGAGGAACGAGGAGTCGC+GGG - Chr3:96632775-96632794 None:intergenic 55.0%
! AAGGGTGAATGCCTCTGGGA+GGG + Chr3:96634423-96634442 MsG0380017470.01.T01:CDS 55.0%
! CAGTCGGCTTTGTGTCGGAT+CGG - Chr3:96634272-96634291 None:intergenic 55.0%
! GGGCAGCGCCGAATAATTTG+GGG + Chr3:96632513-96632532 MsG0380017470.01.T01:CDS 55.0%
! GGGGCAGCGCCGAATAATTT+GGG + Chr3:96632512-96632531 MsG0380017470.01.T01:CDS 55.0%
! GTTGGTTTCTCCCGCTTGCT+AGG - Chr3:96632608-96632627 None:intergenic 55.0%
! TGGGGCAGCGCCGAATAATT+TGG + Chr3:96632511-96632530 MsG0380017470.01.T01:CDS 55.0%
! TTTTGCCGGAGCAGTGTCAG+CGG - Chr3:96632998-96633017 None:intergenic 55.0%
!! GTTCCAGTGGAAGAGGTGTC+TGG + Chr3:96633753-96633772 MsG0380017470.01.T01:CDS 55.0%
ATTAGCCGCTGCTCTGGCGT+TGG + Chr3:96632882-96632901 MsG0380017470.01.T01:CDS 60.0%
CCACCAGACACCTCTTCCAC+TGG - Chr3:96633759-96633778 None:intergenic 60.0%
GACACTGCTCCGGCAAAAGC+AGG + Chr3:96633000-96633019 MsG0380017470.01.T01:CDS 60.0%
GGAGTCATTAGCCGCTGCTC+TGG + Chr3:96632876-96632895 MsG0380017470.01.T01:CDS 60.0%
GGATACCAACGCCAGAGCAG+CGG - Chr3:96632890-96632909 None:intergenic 60.0%
GGCTCCCTGATTCTGCGACA+CGG - Chr3:96632375-96632394 None:intergenic 60.0%
GTGAGGATAGCCGAAGGCTG+AGG + Chr3:96633623-96633642 MsG0380017470.01.T01:intron 60.0%
!! CCAGTGGAAGAGGTGTCTGG+TGG + Chr3:96633756-96633775 MsG0380017470.01.T01:CDS 60.0%
CGCATCCGCTGACACTGCTC+CGG + Chr3:96632990-96633009 MsG0380017470.01.T01:CDS 65.0%
CGGAGCAGTGTCAGCGGATG+CGG - Chr3:96632992-96633011 None:intergenic 65.0%
TCGGCGCTGCCCCATTTGCA+TGG - Chr3:96632505-96632524 None:intergenic 65.0%
! GCTGGAGCATTCCCTCCCAG+AGG - Chr3:96634437-96634456 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 96632248 96634932 96632248 ID=MsG0380017470.01;Name=MsG0380017470.01
Chr3 mRNA 96632248 96634932 96632248 ID=MsG0380017470.01.T01;Parent=MsG0380017470.01;Name=MsG0380017470.01.T01;_AED=0.48;_eAED=0.53;_QI=0|0|0|1|1|1|8|0|553
Chr3 exon 96632248 96632712 96632248 ID=MsG0380017470.01.T01:exon:27040;Parent=MsG0380017470.01.T01
Chr3 exon 96632808 96633028 96632808 ID=MsG0380017470.01.T01:exon:27041;Parent=MsG0380017470.01.T01
Chr3 exon 96633245 96633386 96633245 ID=MsG0380017470.01.T01:exon:27042;Parent=MsG0380017470.01.T01
Chr3 exon 96633540 96633622 96633540 ID=MsG0380017470.01.T01:exon:27043;Parent=MsG0380017470.01.T01
Chr3 exon 96633704 96633863 96633704 ID=MsG0380017470.01.T01:exon:27044;Parent=MsG0380017470.01.T01
Chr3 exon 96633983 96634172 96633983 ID=MsG0380017470.01.T01:exon:27045;Parent=MsG0380017470.01.T01
Chr3 exon 96634235 96634479 96634235 ID=MsG0380017470.01.T01:exon:27046;Parent=MsG0380017470.01.T01
Chr3 exon 96634777 96634932 96634777 ID=MsG0380017470.01.T01:exon:27047;Parent=MsG0380017470.01.T01
Chr3 CDS 96632248 96632712 96632248 ID=MsG0380017470.01.T01:cds;Parent=MsG0380017470.01.T01
Chr3 CDS 96632808 96633028 96632808 ID=MsG0380017470.01.T01:cds;Parent=MsG0380017470.01.T01
Chr3 CDS 96633245 96633386 96633245 ID=MsG0380017470.01.T01:cds;Parent=MsG0380017470.01.T01
Chr3 CDS 96633540 96633622 96633540 ID=MsG0380017470.01.T01:cds;Parent=MsG0380017470.01.T01
Chr3 CDS 96633704 96633863 96633704 ID=MsG0380017470.01.T01:cds;Parent=MsG0380017470.01.T01
Chr3 CDS 96633983 96634172 96633983 ID=MsG0380017470.01.T01:cds;Parent=MsG0380017470.01.T01
Chr3 CDS 96634235 96634479 96634235 ID=MsG0380017470.01.T01:cds;Parent=MsG0380017470.01.T01
Chr3 CDS 96634777 96634932 96634777 ID=MsG0380017470.01.T01:cds;Parent=MsG0380017470.01.T01
Gene Sequence

>MsG0380017470.01.T01

ATGGTTGGAATGTCGAATAATTTGGTTTCGGAGTCAGTAACAAGCAGTCAGATGGCTCAATTGGAGCCTACAATGAACAAGGCAGATGGCTCAATGGCTCTCTTACGTCCTGTGTCCACTGATTCCGTGTCGCAGAATCAGGGAGCCTCAAATGGTGAACCCATGTCTCAAGGTTTACCACTTTCTAATCGGTTGAGTGGTCATGAAGGTGGTGGTAATATGGGAATGCACCGGGTTATTGCAGAACAAACAATCCATGCAAATGGGGCAGCGCCGAATAATTTGGGGCCACATCAAGTGTCAGCAGCTCCTAAGCGAAAGGCAACAATGGAACTTCCTTCGGGTAGCTTTATAACACCTAGCAAGCGGGAGAAACCAACGCCACAAAGACCTTGGATGCCGCAAGGTTCTAATTCATCAACCAAAATTTCTTCACGGATGCAATCCTCATCAAATCCTTCTAGGAATGCACAGTTGAAAGAATCCTCCAAGGTTCAGACTGAATCATCTGAGAGTGTTCGGTCAAAGATGAGGGAGTCATTAGCCGCTGCTCTGGCGTTGGTATCCCAGCAAGATAAACCTCTGGTGTCAAACGACGACAAACCAAACAATGCTGCCAATAGCTCTCAGTGTGCTGGTTCAGCATCCGCATCCGCTGACACTGCTCCGGCAAAAGCAGGAAATTTTGATAGTTTTTTTGTGAAAGATGAACTTTTGCAGGGAAATGGTCTTTCCTGGGTATTATCTGATATGGACCATATGGTGGTCATTGATGATCAAAGTGAAAGCCAAACTACAATAGAGAAAAATTGGAACCTGAGGAAACAGAGAAAGGTTATGTTTGGTAAAATTCTTCCAGAACAACTATGTTCCATGACTGCAGAGGAACTTGCTTCAAAGGAGCTTTCTGAGAAAACGCATAAAGGTGAATTTCAAGTGGAAGTTGAACATGAAGACAATGTTCCAGTGGAAGAGGTGTCTGGTGGCAAAAATTCTGTTGTTCGAAGGCAACCGGTTAAGAAGGACGTGGAAGGCACTTCTCCTTCCAAACCTGATGTAGTCAAAAGCAATGACCCTAACTTTCTTCCACCAATTGTATCACTTGATGAATTCATGGAATCTCTTAATTCTGAGCCACCGTTTGAAAATTTACCTGTAGAGTCTGGAAAAGCACCTATATCGGAAGAGGATGTTTCTGGGGTTGGATCTAAATCAAAATCTTCTGATTTAACTCCCAGTGAGCAAGATGATGTCAGTGCTAGGTCCATCTTGTCTGATGCAAAACACAGTGAAAGCCGATCCGACACAAAGCCGACTGATGGTCATACCAAGGAAATGTCACCTGATGGCAAAAAGTCAACTTCCGATGACGCTGAGTTGAGAGCTAGTCAGTTTCATGCAGAAGAGAGACATGGCAAGGATAAAATGTCTAAAACTACAGTTCCCATTAAGGGTGAATGCCTCTGGGAGGGAATGCTCCAGCCAAACATCTCAACCACTGATTCAATTTTATTTGGTACTGACTTACTTGTGATTTTGTTTAAGCCTGCTAACAATCTTGCATTAAATATGTGGCATCCTACATTTACTGCGGTCCCTTATGTTCTGTGGATCAAATTTCATGTTCTAGCTGAACTCAATGGCTATTGTGCTGAAGCATAA
Protein sequence

>MsG0380017470.01.T01

MVGMSNNLVSESVTSSQMAQLEPTMNKADGSMALLRPVSTDSVSQNQGASNGEPMSQGLPLSNRLSGHEGGGNMGMHRVIAEQTIHANGAAPNNLGPHQVSAAPKRKATMELPSGSFITPSKREKPTPQRPWMPQGSNSSTKISSRMQSSSNPSRNAQLKESSKVQTESSESVRSKMRESLAAALALVSQQDKPLVSNDDKPNNAANSSQCAGSASASADTAPAKAGNFDSFFVKDELLQGNGLSWVLSDMDHMVVIDDQSESQTTIEKNWNLRKQRKVMFGKILPEQLCSMTAEELASKELSEKTHKGEFQVEVEHEDNVPVEEVSGGKNSVVRRQPVKKDVEGTSPSKPDVVKSNDPNFLPPIVSLDEFMESLNSEPPFENLPVESGKAPISEEDVSGVGSKSKSSDLTPSEQDDVSARSILSDAKHSESRSDTKPTDGHTKEMSPDGKKSTSDDAELRASQFHAEERHGKDKMSKTTVPIKGECLWEGMLQPNISTTDSILFGTDLLVILFKPANNLALNMWHPTFTAVPYVLWIKFHVLAELNGYCAEA*