AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022169.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022169.01.T01 MTR_4g084080 85.474 1191 67 6 2 1092 64 1248 0.0 2034
MsG0480022169.01.T01 MTR_4g084080 72.021 193 44 2 971 1153 970 1162 6.18e-71 261
MsG0480022169.01.T01 MTR_2g066940 53.846 91 37 2 5 95 171 256 1.83e-18 91.3
MsG0480022169.01.T01 MTR_2g067150 49.524 105 43 3 5 104 209 308 1.84e-18 91.3
MsG0480022169.01.T01 MTR_3g012500 40.336 119 64 3 4 122 359 470 4.51e-15 80.5
MsG0480022169.01.T01 MTR_3g012490 45.122 82 39 2 3 84 287 362 1.39e-13 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022169.01.T01 AT2G35140 45.324 139 70 4 2 138 68 202 3.12e-22 104
MsG0480022169.01.T01 AT2G35140 45.324 139 70 4 2 138 68 202 3.12e-22 104
MsG0480022169.01.T01 AT2G35140 45.324 139 70 4 2 138 68 202 3.12e-22 104
MsG0480022169.01.T01 AT2G35140 45.324 139 70 4 2 138 68 202 3.12e-22 104
MsG0480022169.01.T01 AT2G35140 45.324 139 70 4 2 138 68 202 3.12e-22 104
MsG0480022169.01.T01 AT2G35140 45.324 139 70 4 2 138 94 228 4.12e-22 103

Find 277 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCACTCTTGTTGAAATT+TGG 0.130590 4:-69241532 None:intergenic
AAAGATGGTTCTGAATATTT+AGG 0.161920 4:+69243046 MsG0480022169.01.T01:CDS
ACAACTTTGGTTGTTGTATT+AGG 0.178483 4:-69241388 None:intergenic
TGATAATCACAAATCATATT+TGG 0.190474 4:+69240520 MsG0480022169.01.T01:CDS
CTACCATACAATACAGAATT+TGG 0.190782 4:-69240338 None:intergenic
CAAGTTTAACTTTGGCTATC+TGG 0.196753 4:+69239143 MsG0480022169.01.T01:CDS
CTGATGTTCCTCTCGCAAAT+TGG 0.216569 4:+69240624 MsG0480022169.01.T01:CDS
CCTATCCCTTCTTCTGATAT+TGG 0.229481 4:+69240458 MsG0480022169.01.T01:CDS
AAAGAACTTTGCTCTAAATT+AGG 0.241063 4:-69240029 None:intergenic
TTGATTAATTACTGATTAAT+AGG 0.242845 4:+69238519 MsG0480022169.01.T01:five_prime_UTR
CCTTGAGAACAACGATTATA+TGG 0.243470 4:+69239804 MsG0480022169.01.T01:CDS
CGTAATCATAAAGATGTTAT+TGG 0.250961 4:+69241622 MsG0480022169.01.T01:CDS
TTCAGGCAGCTACCATCTTT+TGG 0.253786 4:+69240173 MsG0480022169.01.T01:CDS
AGGAGCTGACGAAGACTTTA+AGG 0.258999 4:-69240438 None:intergenic
TGTTCAAAATGACAGAGTTT+TGG 0.265544 4:+69239488 MsG0480022169.01.T01:CDS
GCAATTGCTGACACCCTTCC+TGG 0.267730 4:+69242522 MsG0480022169.01.T01:CDS
TCAAATCAGTAGTTTGAAAA+AGG 0.292255 4:+69241120 MsG0480022169.01.T01:CDS
AAATAAAAGGATTAATAATA+AGG 0.296887 4:-69238130 None:intergenic
TGCAGTATCCAGAGAGAGTT+TGG 0.300252 4:-69239728 None:intergenic
GGCGAAGTTGGAAGATCTTT+TGG 0.300392 4:+69239375 MsG0480022169.01.T01:CDS
TCTGATGATGTTAGAGTTCA+TGG 0.301959 4:+69239874 MsG0480022169.01.T01:CDS
ATTGGATCATGGATACGATA+TGG 0.302068 4:+69240676 MsG0480022169.01.T01:CDS
TCTGATCCATCATTTAATTC+AGG 0.305246 4:-69241994 None:intergenic
TGGGTATGTTGGTGATTATT+TGG 0.306546 4:+69239753 MsG0480022169.01.T01:CDS
ATGCACTCTTGTTGAAATTT+GGG 0.317527 4:-69241531 None:intergenic
GCCCTTCCTACATTATTTGA+TGG 0.319243 4:+69241796 MsG0480022169.01.T01:CDS
AAGATGGTTCTGAATATTTA+GGG 0.319524 4:+69243047 MsG0480022169.01.T01:CDS
AGTATTAGTATAGAATCTTT+AGG 0.320535 4:+69238621 MsG0480022169.01.T01:five_prime_UTR
TGTTTCAAGAAGGGATTGTT+TGG 0.323448 4:+69238747 MsG0480022169.01.T01:five_prime_UTR
GGCGAAGCTGGAAGATCTTT+TGG 0.326727 4:+69239444 MsG0480022169.01.T01:CDS
CCTACTGAGTACGGCTCTAA+TGG 0.328108 4:-69239423 None:intergenic
GAGAAGGAGCCACAATCTTT+TGG 0.329390 4:-69243013 None:intergenic
TAATTTAGAGCAAAGTTCTT+TGG 0.331218 4:+69240031 MsG0480022169.01.T01:CDS
AGAACCATCTTTAGCTTCAA+TGG 0.336234 4:-69243035 None:intergenic
TTGCACAGGAAGTGCTTAAA+TGG 0.342320 4:-69240097 None:intergenic
CGGTTCGGTGGCAGCGCAAT+AGG 0.345804 4:-69237981 None:intergenic
GATATGAAAGAATTACTTCA+TGG 0.357212 4:+69238836 MsG0480022169.01.T01:exon
TTCAGTATTGTTGCGCTGAT+TGG 0.359013 4:-69240912 None:intergenic
CTGTATTGTATGGTAGCAAC+AGG 0.363364 4:+69240345 MsG0480022169.01.T01:CDS
AGGTTAAGTTCACTGAGATT+TGG 0.363461 4:+69239055 MsG0480022169.01.T01:intron
GGTCAAACGTGAAGAACATT+TGG 0.367396 4:+69238540 MsG0480022169.01.T01:five_prime_UTR
CTTCTTCTTCTTCATACTAC+AGG 0.368933 4:-69241299 None:intergenic
GATCCAATGAATCATCATAT+TGG 0.372445 4:-69240661 None:intergenic
TTCCTTCCGCAGTTGGTTGA+TGG 0.373418 4:-69240236 None:intergenic
ATGCTCCTGGCTTAAACTTC+AGG 0.382193 4:+69240156 MsG0480022169.01.T01:CDS
AATGCACAGAAGGAGGAATA+TGG 0.384066 4:+69240809 MsG0480022169.01.T01:CDS
CAGTACTCAGTTGGCGAAGT+TGG 0.385105 4:+69239363 MsG0480022169.01.T01:CDS
CTCTCTCTGGATACTGCAAA+TGG 0.388691 4:+69239733 MsG0480022169.01.T01:CDS
AGGCTTTGCCCTCAACTACT+TGG 0.390319 4:+69242589 MsG0480022169.01.T01:CDS
GTCAAACGTGAAGAACATTT+GGG 0.391681 4:+69238541 MsG0480022169.01.T01:five_prime_UTR
ACTGTTCATGCATTAATTGA+TGG 0.392786 4:+69242342 MsG0480022169.01.T01:CDS
CCGTACTCAGTAGGCGAAGC+TGG 0.393054 4:+69239432 MsG0480022169.01.T01:CDS
TTATGATTACGACTTGCATT+TGG 0.400853 4:-69241610 None:intergenic
TGATGTTCCTCTCGCAAATT+GGG 0.405672 4:+69240625 MsG0480022169.01.T01:CDS
TAATGTAGAAGCAGCATCTC+TGG 0.405710 4:+69241918 MsG0480022169.01.T01:CDS
AAATACAGATGGCACAATAT+TGG 0.408910 4:+69240305 MsG0480022169.01.T01:CDS
AGTCCAATATGATGATTCAT+TGG 0.408949 4:+69240658 MsG0480022169.01.T01:CDS
TAGTTGAGGGCAAAGCCTTT+TGG 0.409070 4:-69242584 None:intergenic
GTTTGGTGAGCGGGAAGGGA+AGG 0.411151 4:-69238015 None:intergenic
AAGCTGAAGACAAAACCTTT+TGG 0.411294 4:-69242392 None:intergenic
CATAAAGATGTTATTGGAAG+TGG 0.412051 4:+69241628 MsG0480022169.01.T01:CDS
AGAGAAGATTATGCCCGATA+TGG 0.413671 4:+69238795 MsG0480022169.01.T01:five_prime_UTR
TTTCCAAATTCTGTATTGTA+TGG 0.415903 4:+69240335 MsG0480022169.01.T01:CDS
CATCACCCGTGAACCTTCCT+TGG 0.417989 4:-69242631 None:intergenic
AAGCTGAGAACAAAACCTTT+TGG 0.418098 4:-69242230 None:intergenic
ATCTTCAGTGGAGGAGAGAA+AGG 0.419463 4:+69241763 MsG0480022169.01.T01:CDS
CTATGCTGCCAAACTCTCTC+TGG 0.420000 4:+69239720 MsG0480022169.01.T01:CDS
TTATCAAACAGTGAAGAAAA+TGG 0.422408 4:-69240503 None:intergenic
TTGTTCCGATCATTCTCTGC+TGG 0.425090 4:+69238271 MsG0480022169.01.T01:five_prime_UTR
AAGCTGAGAACAAAACCTTT+TGG 0.426140 4:-69241846 None:intergenic
TCTTCTGATATTGGAAATAG+TGG 0.427106 4:+69240467 MsG0480022169.01.T01:CDS
AAGCAGATTCTGACGCCAAC+TGG 0.428407 4:-69240388 None:intergenic
TTCATCCTTGTTGTGTTCCA+AGG 0.432140 4:-69240996 None:intergenic
GAAGACAAAGACATTAATCT+TGG 0.433710 4:+69241559 MsG0480022169.01.T01:CDS
ATCATTGACCCTCATTGTTA+CGG 0.436015 4:-69238648 None:intergenic
GCAGCTAACAAGTTTAACTT+TGG 0.438060 4:+69239135 MsG0480022169.01.T01:CDS
AAAGTGTAAAGCAGCATAAT+CGG 0.438868 4:-69238196 None:intergenic
ATAAAGATTGCACCGAAAAC+CGG 0.438890 4:-69238701 None:intergenic
TTTGGTGAGCGGGAAGGGAA+GGG 0.444058 4:-69238014 None:intergenic
CACCATACATGAACCTTCCT+TGG 0.444248 4:-69242439 None:intergenic
GTTTCAAGAAGGGATTGTTT+GGG 0.450309 4:+69238748 MsG0480022169.01.T01:five_prime_UTR
AATAGGAATGAATGAATGAA+TGG 0.451459 4:-69237964 None:intergenic
CCCTTCCTACATTATTTGAT+GGG 0.452385 4:+69241797 MsG0480022169.01.T01:CDS
ACTTTGGCTATCTGGAGATC+AGG 0.452552 4:+69239151 MsG0480022169.01.T01:CDS
CAATGCTCGCGGAAAAGATC+CGG 0.452682 4:+69238682 MsG0480022169.01.T01:five_prime_UTR
AAGGGAGAGAAGAGACGGTT+CGG 0.455248 4:-69237996 None:intergenic
AGAGTGAGAATTTGTTGGTT+GGG 0.456658 4:+69241482 MsG0480022169.01.T01:CDS
AGATCTCTTTGAAAATGCCT+TGG 0.457007 4:+69241063 MsG0480022169.01.T01:CDS
CCATATAATCGTTGTTCTCA+AGG 0.457580 4:-69239804 None:intergenic
CACTTCATCAACTGAAGTAA+TGG 0.457780 4:-69240834 None:intergenic
CGTTGAATTCCTTCCGCAGT+TGG 0.461142 4:-69240243 None:intergenic
ATCTCTCTTCTTCCTCTGAC+TGG 0.463076 4:-69241044 None:intergenic
ACGCTTGAAATCAACAACTT+TGG 0.464373 4:-69241401 None:intergenic
ATTATATGGGCACACATCTC+AGG 0.465272 4:+69239818 MsG0480022169.01.T01:CDS
TTAGGTTTGGTGAGCGGGAA+GGG 0.465690 4:-69238019 None:intergenic
CCTAGCAAAGTGAATGCCTT+AGG 0.466361 4:-69238899 None:intergenic
AGTTAGAACCGGAGGTTCCT+AGG 0.468383 4:+69239304 MsG0480022169.01.T01:CDS
TGCACGTGATGTTAACAAAC+GGG 0.472052 4:+69240775 MsG0480022169.01.T01:CDS
CCTAAGGCATTCACTTTGCT+AGG 0.473973 4:+69238899 MsG0480022169.01.T01:CDS
GATGAAAGTTTGAGGAAGAA+AGG 0.475284 4:+69241184 MsG0480022169.01.T01:CDS
GATTCTCAAAATAGCAATCA+TGG 0.475985 4:+69240710 MsG0480022169.01.T01:CDS
TTCAGCTCCTTGTGTTGCAC+AGG 0.476509 4:-69240111 None:intergenic
TGCCTTGGATGATCTAAATA+CGG 0.478343 4:+69241339 MsG0480022169.01.T01:CDS
CTGTATGATTCAGATGCTCC+TGG 0.479009 4:+69240143 MsG0480022169.01.T01:CDS
ATGTGACAAGAAGTTTCAAC+TGG 0.480632 4:-69243091 None:intergenic
GACAAAGACATTAATCTTGG+TGG 0.480645 4:+69241562 MsG0480022169.01.T01:CDS
ACCTTTCCTGCATTAAATGA+TGG 0.482099 4:+69242180 MsG0480022169.01.T01:CDS
TTCCGCGAGCATTGTTGTTG+TGG 0.482131 4:-69238673 None:intergenic
TTCTCCATTGAAGCTAAAGA+TGG 0.482525 4:+69243031 MsG0480022169.01.T01:CDS
CAAGGAAGGTTCATGTATGA+TGG 0.485913 4:+69241894 MsG0480022169.01.T01:CDS
AGATTGCTCTGAAAATGCCT+TGG 0.485948 4:+69241150 MsG0480022169.01.T01:CDS
TTGGATCATGGATACGATAT+GGG 0.486675 4:+69240677 MsG0480022169.01.T01:CDS
AAAAGTAGCATCTCTGAAGA+TGG 0.486918 4:+69242278 MsG0480022169.01.T01:CDS
GGCATAATCTTCTCTACGAA+TGG 0.488960 4:-69238787 None:intergenic
ATCCGTCTCCTAGGAACCTC+CGG 0.489014 4:-69239312 None:intergenic
ACAACAAGGATGAAAGCTTA+AGG 0.490749 4:+69241005 MsG0480022169.01.T01:CDS
GCTCTAGACATCCGTCTCCT+AGG 0.491161 4:-69239321 None:intergenic
TCATGCATTAATTGATGGAC+CGG 0.493185 4:+69242347 MsG0480022169.01.T01:CDS
TGGCAAGAAAAGATGACAGC+AGG 0.494172 4:+69239773 MsG0480022169.01.T01:CDS
TCAGTATTGTTGCGCTGATT+GGG 0.495031 4:-69240911 None:intergenic
AGAGCGAAGGTACACGCCTA+TGG 0.495191 4:-69238057 None:intergenic
CTCTTCATTCCAAGTAGTTG+AGG 0.496425 4:-69242598 None:intergenic
TTCATCCTCGTTGTGTTCCA+AGG 0.497384 4:-69241080 None:intergenic
CGACATGAACAAGTTAGAAC+CGG 0.497451 4:+69239293 MsG0480022169.01.T01:CDS
ACGGATTCCACAACTGTGAC+TGG 0.498542 4:+69241358 MsG0480022169.01.T01:CDS
TCTTCATTCCAAGTAGTTGA+GGG 0.499901 4:-69242597 None:intergenic
TATGATGATTCATTGGATCA+TGG 0.500586 4:+69240665 MsG0480022169.01.T01:CDS
AACGAAGAAAAGAGATTGCT+CGG 0.502419 4:+69241225 MsG0480022169.01.T01:CDS
TAACGGGTTCTCACCTGAGC+AGG 0.502518 4:-69238932 None:intergenic
AGTTGATGAAGTGATGGAAA+TGG 0.502770 4:+69240844 MsG0480022169.01.T01:CDS
TTTAGGTTTGGTGAGCGGGA+AGG 0.503324 4:-69238020 None:intergenic
AAGAGTGAGAATTTGTTGGT+TGG 0.504667 4:+69241481 MsG0480022169.01.T01:CDS
GCAACAATACTGAAAGTTTG+AGG 0.507451 4:+69240921 MsG0480022169.01.T01:CDS
ATGCACGTGATGTTAACAAA+CGG 0.508050 4:+69240774 MsG0480022169.01.T01:CDS
CCATTATTAATTCCAAAAGA+TGG 0.508188 4:-69240185 None:intergenic
GATTGCTCTGAAAATGCCTT+GGG 0.508618 4:+69241151 MsG0480022169.01.T01:CDS
TGATTGCTTTGAAAATGCCT+TGG 0.508748 4:+69240979 MsG0480022169.01.T01:CDS
AGATTGCTTTGAAAATGCCT+TGG 0.509112 4:+69241324 MsG0480022169.01.T01:CDS
CGGATATTCTTGCAATGCCA+TGG 0.509137 4:-69240558 None:intergenic
ATCTTTAGCTTCAATGGAGA+AGG 0.510043 4:-69243029 None:intergenic
AGGAAGTGCTTAAATGGAAT+GGG 0.510847 4:-69240091 None:intergenic
GCATAATCTTCTCTACGAAT+GGG 0.510972 4:-69238786 None:intergenic
ACCCTTCCTGGATTAAATGA+TGG 0.511966 4:+69242534 MsG0480022169.01.T01:CDS
CAAGGAAGGTTCACGGGTGA+TGG 0.513168 4:+69242632 MsG0480022169.01.T01:CDS
CGAGAAGAATGTTTCAAGAA+GGG 0.513704 4:+69238738 MsG0480022169.01.T01:five_prime_UTR
CTCCATCAACCAACTGCGGA+AGG 0.516261 4:+69240234 MsG0480022169.01.T01:CDS
CTTGAGAACAACGATTATAT+GGG 0.516396 4:+69239805 MsG0480022169.01.T01:CDS
GACAAAATGCCAAAAGATTG+TGG 0.520977 4:+69243004 MsG0480022169.01.T01:CDS
TGAAGAGAGTTCTTGTACCA+AGG 0.523096 4:+69242422 MsG0480022169.01.T01:CDS
TGAAGAGAGTTCTCATACCA+AGG 0.523096 4:+69242614 MsG0480022169.01.T01:CDS
AGGGATACAATATCCTGCTC+AGG 0.524284 4:+69238919 MsG0480022169.01.T01:CDS
TGAAACTTCTTGTCACATTG+AGG 0.525546 4:+69243096 MsG0480022169.01.T01:CDS
GTCAGAATCTGCTTTATATG+AGG 0.527755 4:+69240397 MsG0480022169.01.T01:CDS
CTCATACCAAGGAAGGTTCA+CGG 0.528782 4:+69242625 MsG0480022169.01.T01:CDS
AAACAGAAACAATGCACAGA+AGG 0.529404 4:+69240799 MsG0480022169.01.T01:CDS
CAGGAAGTGCTTAAATGGAA+TGG 0.530324 4:-69240092 None:intergenic
TGAAGAGAGTTCTCATACCG+AGG 0.530516 4:+69242068 MsG0480022169.01.T01:CDS
TCTGGTCCATCATTTAATCC+AGG 0.532393 4:-69242540 None:intergenic
ATAGGAATGAATGAATGAAT+GGG 0.532696 4:-69237963 None:intergenic
ATCCATCATTTAATTCAGGA+AGG 0.533991 4:-69241990 None:intergenic
GGTCATGGAATGCTTGATGA+AGG 0.534269 4:+69239396 MsG0480022169.01.T01:CDS
TACTTCAGTTGATGAAGTGA+TGG 0.534655 4:+69240838 MsG0480022169.01.T01:CDS
CTATTTCCAATATCAGAAGA+AGG 0.535862 4:-69240464 None:intergenic
TCGAGAAGAATGTTTCAAGA+AGG 0.536702 4:+69238737 MsG0480022169.01.T01:five_prime_UTR
TACCGAGGGAAGTTCATGTA+TGG 0.537020 4:+69242083 MsG0480022169.01.T01:CDS
TACCAAGGAAGGTTCATGTA+TGG 0.538200 4:+69242437 MsG0480022169.01.T01:CDS
TCTGATCCATCATTTAATGC+AGG 0.538711 4:-69242186 None:intergenic
TCTGAATATTTAGGGAATGC+CGG 0.540667 4:+69243055 MsG0480022169.01.T01:CDS
ACGCCTATGGAGAGAGGAGG+AGG 0.541144 4:-69238044 None:intergenic
CGGAAGGAATTCAACGAGTA+GGG 0.541736 4:+69240250 MsG0480022169.01.T01:CDS
GCCACAGAATTTATCTTCAG+TGG 0.542025 4:+69241751 MsG0480022169.01.T01:CDS
TTCATCCTCATTGTGTCCCA+AGG 0.544133 4:-69241167 None:intergenic
GAGAGTTCTTGTACCAAGGA+AGG 0.545936 4:+69242426 MsG0480022169.01.T01:CDS
AGAACATTTGGGGTATATGA+TGG 0.546372 4:+69238552 MsG0480022169.01.T01:five_prime_UTR
CTGATATTGGAAATAGTGGC+AGG 0.546936 4:+69240471 MsG0480022169.01.T01:CDS
TCTCTCTGGATACTGCAAAT+GGG 0.547137 4:+69239734 MsG0480022169.01.T01:CDS
CTACACCAGCAGAGAATGAT+CGG 0.547836 4:-69238276 None:intergenic
AGCTGCCTGAAGTTTAAGCC+AGG 0.549207 4:-69240161 None:intergenic
ATCGTGCAGAATATTCTCCT+TGG 0.549495 4:-69239545 None:intergenic
CCAGCTTCGCCTACTGAGTA+CGG 0.550685 4:-69239432 None:intergenic
GGACTATAATGTTCATCCCA+TGG 0.550701 4:+69240541 MsG0480022169.01.T01:CDS
TTAGAGTTCATGGTGATGGC+AGG 0.551415 4:+69239884 MsG0480022169.01.T01:CDS
CCATTAGAGCCGTACTCAGT+AGG 0.551970 4:+69239423 MsG0480022169.01.T01:CDS
AAACCTCCTCCTCTCTCCAT+AGG 0.552696 4:+69238041 MsG0480022169.01.T01:five_prime_UTR
GCGGAAGGAATTCAACGAGT+AGG 0.555263 4:+69240249 MsG0480022169.01.T01:CDS
AGGTAGCAATATCGATCCTA+AGG 0.556717 4:+69238883 MsG0480022169.01.T01:CDS
ACAATGAGGATGAAAGTTTG+AGG 0.558520 4:+69241176 MsG0480022169.01.T01:CDS
GCGTATCCACCTACACTGTA+TGG 0.559286 4:-69239841 None:intergenic
CATATAATCGTTGTTCTCAA+GGG 0.559394 4:-69239803 None:intergenic
ACAACGAGGATGAAAGTTTG+AGG 0.560145 4:+69241089 MsG0480022169.01.T01:CDS
TCTTCAGTGGAGGAGAGAAA+GGG 0.562156 4:+69241764 MsG0480022169.01.T01:CDS
GGAGAGAAGAGACGGTTCGG+TGG 0.562287 4:-69237993 None:intergenic
TCTGACCCATCAAATAATGT+AGG 0.563664 4:-69241802 None:intergenic
TTGTTGCGCTGATTGGGTGT+TGG 0.565018 4:-69240905 None:intergenic
ACCCTTCCTGAATTAAATGA+TGG 0.565083 4:+69241988 MsG0480022169.01.T01:CDS
AAGGGAAGGGAGAGAAGAGA+CGG 0.565398 4:-69238001 None:intergenic
ACCCATCAAATAATGTAGGA+AGG 0.567596 4:-69241798 None:intergenic
GTCCATCATTTAATCCAGGA+AGG 0.568632 4:-69242536 None:intergenic
TACGAATGGGATAAGAAGAC+GGG 0.569903 4:-69238773 None:intergenic
AGGTCAAATTTGTTTCAACT+AGG 0.570919 4:+69238394 MsG0480022169.01.T01:five_prime_UTR
CTCTTCATTGCAAGAAGCCG+AGG 0.572492 4:-69242052 None:intergenic
TGGTAATTATGCATCAAGAC+AGG 0.572791 4:-69239525 None:intergenic
ACAACGAGGATGAAAGTTTG+AGG 0.573671 4:+69241263 MsG0480022169.01.T01:CDS
CACCATACATGAACTTCCCT+CGG 0.574114 4:-69242085 None:intergenic
CTAAGGCATTCACTTTGCTA+GGG 0.575167 4:+69238900 MsG0480022169.01.T01:CDS
GAGAGTTCTCATACCAAGGA+AGG 0.576498 4:+69242618 MsG0480022169.01.T01:CDS
GAATATTCTGCACGATACAA+TGG 0.576914 4:+69239552 MsG0480022169.01.T01:CDS
TTACGACTTGCATTTGGCAA+TGG 0.579633 4:-69241604 None:intergenic
CTACGAATGGGATAAGAAGA+CGG 0.580857 4:-69238774 None:intergenic
CAAGGAAGGTTCATGTATGG+TGG 0.581118 4:+69242440 MsG0480022169.01.T01:CDS
TCATACCAAGGAAGGTTCAC+GGG 0.582696 4:+69242626 MsG0480022169.01.T01:CDS
CCAATATCAGAAGAAGGGAT+AGG 0.583349 4:-69240458 None:intergenic
AACCGGAGGTTCCTAGGAGA+CGG 0.584028 4:+69239310 MsG0480022169.01.T01:CDS
ACATCAGAGCAGTACTCAGT+TGG 0.584878 4:+69239354 MsG0480022169.01.T01:CDS
AGATTGCTCGGAGAATGTCT+TGG 0.585472 4:+69241237 MsG0480022169.01.T01:CDS
TGATTTCAAGCGTCGAAGCA+AGG 0.586627 4:+69241411 MsG0480022169.01.T01:CDS
CGAGGGAAGTTCATGTATGG+TGG 0.587426 4:+69242086 MsG0480022169.01.T01:CDS
ATCCGTATTTAGATCATCCA+AGG 0.588020 4:-69241341 None:intergenic
AAATGCCTTGGAACACAACA+AGG 0.589651 4:+69240991 MsG0480022169.01.T01:CDS
CTCAGGCCATACAGTGTAGG+TGG 0.589803 4:+69239835 MsG0480022169.01.T01:CDS
CAGAAACAATGCACAGAAGG+AGG 0.590268 4:+69240802 MsG0480022169.01.T01:CDS
CCCATCAAATAATGTAGGAA+GGG 0.590369 4:-69241797 None:intergenic
CATACAAAACTCTGGCCAGT+TGG 0.590866 4:+69240373 MsG0480022169.01.T01:CDS
AACTGTAAATATTCAAACGC+CGG 0.591944 4:-69238318 None:intergenic
TCCATCATTTAATGCAGGAA+AGG 0.592991 4:-69242181 None:intergenic
TAGGTTTACCGTAACAATGA+GGG 0.593041 4:+69238640 MsG0480022169.01.T01:five_prime_UTR
AGCACTTCCTGTGCAACACA+AGG 0.594010 4:+69240104 MsG0480022169.01.T01:CDS
GGATATTCTTGCAATGCCAT+GGG 0.597707 4:-69240557 None:intergenic
GATACTGCAAATGGGTATGT+TGG 0.597881 4:+69239742 MsG0480022169.01.T01:CDS
TATTTCCAATATCAGAAGAA+GGG 0.599016 4:-69240463 None:intergenic
AGGGAATGCATACAAAACTC+TGG 0.600459 4:+69240365 MsG0480022169.01.T01:CDS
AACATCATCAGAAGGAATGT+CGG 0.601317 4:-69239863 None:intergenic
AGTTCTGTATGCACGAGTTG+TGG 0.602337 4:-69240275 None:intergenic
ATTTGATGGGTCAGAATGTG+CGG 0.603587 4:+69241810 MsG0480022169.01.T01:CDS
AAAAGCAGTATCTCTGAAGA+CGG 0.605385 4:+69242116 MsG0480022169.01.T01:CDS
TTAGGTTTACCGTAACAATG+AGG 0.607994 4:+69238639 MsG0480022169.01.T01:five_prime_UTR
TCCATCATTTAATTCAGGAA+GGG 0.608308 4:-69241989 None:intergenic
ATTGCCTCCAGTCACAGTTG+TGG 0.609147 4:-69241365 None:intergenic
TATTGGAAGTGGATGTACAT+TGG 0.613937 4:+69241639 MsG0480022169.01.T01:CDS
AAGTGATGGAAATGGTTCGT+CGG 0.619342 4:+69240852 MsG0480022169.01.T01:CDS
AGAAGCAGCATCTCTGGAGA+AGG 0.620850 4:+69241924 MsG0480022169.01.T01:CDS
TTCGTCGGAGTCAAAGCCAC+CGG 0.622611 4:+69240867 MsG0480022169.01.T01:CDS
ACAGAATTTATCTTCAGTGG+AGG 0.623986 4:+69241754 MsG0480022169.01.T01:CDS
AACTCAAAGACAAATACAGA+TGG 0.626859 4:+69240294 MsG0480022169.01.T01:CDS
AAACTCAAGTCACCAGTCAG+AGG 0.627950 4:+69241032 MsG0480022169.01.T01:CDS
GCATAATCGGAACGGCGCAA+CGG 0.630141 4:-69238183 None:intergenic
TTCAAGGCTACTTCTAAGGG+AGG 0.630188 4:+69238863 MsG0480022169.01.T01:CDS
GAAGAGAGTTCTCATACCGA+GGG 0.630928 4:+69242069 MsG0480022169.01.T01:CDS
AAATTATCCCAATTTGCGAG+AGG 0.631012 4:-69240632 None:intergenic
GGATACGATATGGGATGTCA+TGG 0.631953 4:+69240686 MsG0480022169.01.T01:CDS
AGGTACACGCCTATGGAGAG+AGG 0.635273 4:-69238050 None:intergenic
TAATAATAAGGAAAAGAATG+CGG 0.637734 4:-69238118 None:intergenic
AACCACAACAACAATGCTCG+CGG 0.637953 4:+69238671 MsG0480022169.01.T01:five_prime_UTR
GCTAGTGTTATATCATGACT+CGG 0.641441 4:-69240578 None:intergenic
ATAACACTAGCAATGAACAA+TGG 0.642971 4:+69240590 MsG0480022169.01.T01:CDS
TCCACTGAAGATAAATTCTG+TGG 0.643618 4:-69241752 None:intergenic
TCCATCATTTAATCCAGGAA+GGG 0.647205 4:-69242535 None:intergenic
TGAACTCTAACATCATCAGA+AGG 0.649743 4:-69239871 None:intergenic
AAATGCCTTGGGACACAATG+AGG 0.654400 4:+69241162 MsG0480022169.01.T01:CDS
GATGTTAGAGTTCATGGTGA+TGG 0.658181 4:+69239880 MsG0480022169.01.T01:CDS
AAATGATGGATCAGAATGTG+CGG 0.658186 4:+69242002 MsG0480022169.01.T01:CDS
TACACGCCTATGGAGAGAGG+AGG 0.658868 4:-69238047 None:intergenic
CATCTCAGGCCATACAGTGT+AGG 0.659620 4:+69239832 MsG0480022169.01.T01:CDS
GTAAAGCAGCATAATCGGAA+CGG 0.660869 4:-69238191 None:intergenic
GTCTTGATGCATAATTACCA+AGG 0.664929 4:+69239528 MsG0480022169.01.T01:CDS
CATGAACAAGTTAGAACCGG+AGG 0.666115 4:+69239296 MsG0480022169.01.T01:CDS
AAATGATGGATCAGAATGTG+CGG 0.667244 4:+69242194 MsG0480022169.01.T01:CDS
TCAAGCGTCGAAGCAAGGTG+AGG 0.674009 4:+69241416 MsG0480022169.01.T01:CDS
AAATGATGGACCAGAATGTG+TGG 0.675680 4:+69242548 MsG0480022169.01.T01:CDS
CTTTCTCCATCAACCAACTG+CGG 0.679533 4:+69240230 MsG0480022169.01.T01:CDS
AAATGCCTTGGAACACAACG+AGG 0.681465 4:+69241075 MsG0480022169.01.T01:CDS
AATTGATGGACCGGAATGTG+TGG 0.682298 4:+69242356 MsG0480022169.01.T01:CDS
GAATGTCTTGGAACACAACG+AGG 0.690050 4:+69241249 MsG0480022169.01.T01:CDS
GATTCCACAACTGTGACTGG+AGG 0.694621 4:+69241361 MsG0480022169.01.T01:CDS
TGTATTGTATGGTAGCAACA+GGG 0.699914 4:+69240346 MsG0480022169.01.T01:CDS
TCAAACGTGAAGAACATTTG+GGG 0.710804 4:+69238542 MsG0480022169.01.T01:five_prime_UTR
AATAGTGTGTGATTAAGCGA+TGG 0.721852 4:-69238094 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAGGATTAATAATA+AGG - Chr4:69238133-69238152 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTGTAAC+CGG + Chr4:69238299-69238318 MsG0480022169.01.T01:five_prime_UTR 10.0%
!! TTAACTAAATTATAGAATGA+AGG - Chr4:69238958-69238977 None:intergenic 15.0%
!!! TTGATTAATTACTGATTAAT+AGG + Chr4:69238519-69238538 MsG0480022169.01.T01:five_prime_UTR 15.0%
!! AAATTATAGAATGAAGGTAA+CGG - Chr4:69238952-69238971 None:intergenic 20.0%
!! AGTATTAGTATAGAATCTTT+AGG + Chr4:69238621-69238640 MsG0480022169.01.T01:five_prime_UTR 20.0%
!! TAAATAAAAACAAGCCATAT+CGG - Chr4:69238812-69238831 None:intergenic 20.0%
!! TAATAATAAGGAAAAGAATG+CGG - Chr4:69238121-69238140 None:intergenic 20.0%
!! TGATAATCACAAATCATATT+TGG + Chr4:69240520-69240539 MsG0480022169.01.T01:CDS 20.0%
!!! AAATGTGAAAGATTTTCAAA+AGG + Chr4:69239204-69239223 MsG0480022169.01.T01:intron 20.0%
!!! AACACACTACTTTTTTTATT+TGG - Chr4:69240740-69240759 None:intergenic 20.0%
! AAATAAAAACAAGCCATATC+GGG - Chr4:69238811-69238830 None:intergenic 25.0%
! AATAGGAATGAATGAATGAA+TGG - Chr4:69237967-69237986 None:intergenic 25.0%
! AATTATAGAATGAAGGTAAC+GGG - Chr4:69238951-69238970 None:intergenic 25.0%
! ATAGGAATGAATGAATGAAT+GGG - Chr4:69237966-69237985 None:intergenic 25.0%
! CCATTATTAATTCCAAAAGA+TGG - Chr4:69240188-69240207 None:intergenic 25.0%
! CGTAATCATAAAGATGTTAT+TGG + Chr4:69241622-69241641 MsG0480022169.01.T01:CDS 25.0%
! GATATGAAAGAATTACTTCA+TGG + Chr4:69238836-69238855 MsG0480022169.01.T01:exon 25.0%
! GGATAATAAAAATCACCAAA+AGG + Chr4:69241831-69241850 MsG0480022169.01.T01:CDS 25.0%
! TAAAAAGAGTGAGAATTTGT+TGG + Chr4:69241477-69241496 MsG0480022169.01.T01:CDS 25.0%
! TAATGTAAAATCAGCATCTT+TGG + Chr4:69242902-69242921 MsG0480022169.01.T01:intron 25.0%
! TATTTCCAATATCAGAAGAA+GGG - Chr4:69240466-69240485 None:intergenic 25.0%
! TCAAATCAGTAGTTTGAAAA+AGG + Chr4:69241120-69241139 MsG0480022169.01.T01:CDS 25.0%
! TCAGCTAAAGTAAACAAAAA+TGG - Chr4:69239015-69239034 None:intergenic 25.0%
! TTATCAAACAGTGAAGAAAA+TGG - Chr4:69240506-69240525 None:intergenic 25.0%
! TTTCCAAATTCTGTATTGTA+TGG + Chr4:69240335-69240354 MsG0480022169.01.T01:CDS 25.0%
!! AAAGAACTTTGCTCTAAATT+AGG - Chr4:69240032-69240051 None:intergenic 25.0%
!! CATAATCGAAATCGTATTTT+AGG + Chr4:69238374-69238393 MsG0480022169.01.T01:five_prime_UTR 25.0%
!! TAATTTAGAGCAAAGTTCTT+TGG + Chr4:69240031-69240050 MsG0480022169.01.T01:CDS 25.0%
!! TTTTAACATCATAATCACAC+TGG - Chr4:69241669-69241688 None:intergenic 25.0%
!! TTTTAGTAAGCAAACAAAGA+AGG + Chr4:69239592-69239611 MsG0480022169.01.T01:intron 25.0%
!!! AAAGATGGTTCTGAATATTT+AGG + Chr4:69243046-69243065 MsG0480022169.01.T01:CDS 25.0%
!!! AAGATGGTTCTGAATATTTA+GGG + Chr4:69243047-69243066 MsG0480022169.01.T01:CDS 25.0%
!!! CACTACTTTTTTTATTTGGA+TGG - Chr4:69240736-69240755 None:intergenic 25.0%
!!! CCATCTTTTGGAATTAATAA+TGG + Chr4:69240185-69240204 MsG0480022169.01.T01:CDS 25.0%
AAAGTGTAAAGCAGCATAAT+CGG - Chr4:69238199-69238218 None:intergenic 30.0%
AAATACAGATGGCACAATAT+TGG + Chr4:69240305-69240324 MsG0480022169.01.T01:CDS 30.0%
AACTCAAAGACAAATACAGA+TGG + Chr4:69240294-69240313 MsG0480022169.01.T01:CDS 30.0%
AACTGTAAATATTCAAACGC+CGG - Chr4:69238321-69238340 None:intergenic 30.0%
ACAACTTTGGTTGTTGTATT+AGG - Chr4:69241391-69241410 None:intergenic 30.0%
ACTGTTCATGCATTAATTGA+TGG + Chr4:69242342-69242361 MsG0480022169.01.T01:CDS 30.0%
AGTCCAATATGATGATTCAT+TGG + Chr4:69240658-69240677 MsG0480022169.01.T01:CDS 30.0%
ATAACACTAGCAATGAACAA+TGG + Chr4:69240590-69240609 MsG0480022169.01.T01:CDS 30.0%
ATCCATCATTTAATTCAGGA+AGG - Chr4:69241993-69242012 None:intergenic 30.0%
ATGCACTCTTGTTGAAATTT+GGG - Chr4:69241534-69241553 None:intergenic 30.0%
CATAAAGATGTTATTGGAAG+TGG + Chr4:69241628-69241647 MsG0480022169.01.T01:CDS 30.0%
CATATAATCGTTGTTCTCAA+GGG - Chr4:69239806-69239825 None:intergenic 30.0%
CTACCATACAATACAGAATT+TGG - Chr4:69240341-69240360 None:intergenic 30.0%
CTATTTCCAATATCAGAAGA+AGG - Chr4:69240467-69240486 None:intergenic 30.0%
CTTGAGAACAACGATTATAT+GGG + Chr4:69239805-69239824 MsG0480022169.01.T01:CDS 30.0%
GAAGACAAAGACATTAATCT+TGG + Chr4:69241559-69241578 MsG0480022169.01.T01:CDS 30.0%
GATCCAATGAATCATCATAT+TGG - Chr4:69240664-69240683 None:intergenic 30.0%
GATTCTCAAAATAGCAATCA+TGG + Chr4:69240710-69240729 MsG0480022169.01.T01:CDS 30.0%
TATGATGATTCATTGGATCA+TGG + Chr4:69240665-69240684 MsG0480022169.01.T01:CDS 30.0%
TCCATCATTTAATTCAGGAA+GGG - Chr4:69241992-69242011 None:intergenic 30.0%
TCTGATCCATCATTTAATTC+AGG - Chr4:69241997-69242016 None:intergenic 30.0%
TCTTCTGATATTGGAAATAG+TGG + Chr4:69240467-69240486 MsG0480022169.01.T01:CDS 30.0%
TGTCAAGAAAAAGCAAATGT+TGG + Chr4:69241964-69241983 MsG0480022169.01.T01:CDS 30.0%
TTATGATTACGACTTGCATT+TGG - Chr4:69241613-69241632 None:intergenic 30.0%
TTTCTCAAGAAAGCAAATGT+TGG + Chr4:69242700-69242719 MsG0480022169.01.T01:intron 30.0%
! AGGTCAAATTTGTTTCAACT+AGG + Chr4:69238394-69238413 MsG0480022169.01.T01:five_prime_UTR 30.0%
! ATCTTTTGGCATTTTGTCAT+TGG - Chr4:69243002-69243021 None:intergenic 30.0%
! ATTACTTCATGGTGTTTTCA+AGG + Chr4:69238847-69238866 MsG0480022169.01.T01:CDS 30.0%
! GTTCAAAATGACAGAGTTTT+GGG + Chr4:69239489-69239508 MsG0480022169.01.T01:CDS 30.0%
! TGTTCAAAATGACAGAGTTT+TGG + Chr4:69239488-69239507 MsG0480022169.01.T01:CDS 30.0%
!! AAGCTGCTTTCATCTTTTAA+TGG - Chr4:69239668-69239687 None:intergenic 30.0%
!! TCGAAATATCTTTTCAGGAA+GGG - Chr4:69239091-69239110 None:intergenic 30.0%
!! TTGGTTTTCTTTTTGTCAAC+CGG - Chr4:69240889-69240908 None:intergenic 30.0%
!! TTTTTGTTATCCACACATTC+TGG - Chr4:69242561-69242580 None:intergenic 30.0%
!!! GAATGAATGGGTTTTTTATG+TGG - Chr4:69237954-69237973 None:intergenic 30.0%
!!! TTTTTTGAACTGTTCTTTGC+AGG + Chr4:69239248-69239267 MsG0480022169.01.T01:intron 30.0%
AAACAGAAACAATGCACAGA+AGG + Chr4:69240799-69240818 MsG0480022169.01.T01:CDS 35.0%
AAATTATCCCAATTTGCGAG+AGG - Chr4:69240635-69240654 None:intergenic 35.0%
AACATCATCAGAAGGAATGT+CGG - Chr4:69239866-69239885 None:intergenic 35.0%
AACCTAAAGCAGAAGATCAA+TGG - Chr4:69239040-69239059 None:intergenic 35.0%
AACGAAGAAAAGAGATTGCT+CGG + Chr4:69241225-69241244 MsG0480022169.01.T01:CDS 35.0%
AATAGTGTGTGATTAAGCGA+TGG - Chr4:69238097-69238116 None:intergenic 35.0%
ACAACAAGGATGAAAGCTTA+AGG + Chr4:69241005-69241024 MsG0480022169.01.T01:CDS 35.0%
ACAATGAGGATGAAAGTTTG+AGG + Chr4:69241176-69241195 MsG0480022169.01.T01:CDS 35.0%
ACAGAATTTATCTTCAGTGG+AGG + Chr4:69241754-69241773 MsG0480022169.01.T01:CDS 35.0%
ACATTGGAATCACGTAAACT+AGG - Chr4:69239984-69240003 None:intergenic 35.0%
ACCCATCAAATAATGTAGGA+AGG - Chr4:69241801-69241820 None:intergenic 35.0%
ACCCTTCCTGAATTAAATGA+TGG + Chr4:69241988-69242007 MsG0480022169.01.T01:CDS 35.0%
ACCTTTCCTGCATTAAATGA+TGG + Chr4:69242180-69242199 MsG0480022169.01.T01:CDS 35.0%
ACGCTTGAAATCAACAACTT+TGG - Chr4:69241404-69241423 None:intergenic 35.0%
ACTCTTCATGCACTAAATGA+TGG + Chr4:69242724-69242743 MsG0480022169.01.T01:intron 35.0%
AGGTTAAGTTCACTGAGATT+TGG + Chr4:69239055-69239074 MsG0480022169.01.T01:intron 35.0%
ATAAAGATTGCACCGAAAAC+CGG - Chr4:69238704-69238723 None:intergenic 35.0%
ATCATTGACCCTCATTGTTA+CGG - Chr4:69238651-69238670 None:intergenic 35.0%
ATCCGTATTTAGATCATCCA+AGG - Chr4:69241344-69241363 None:intergenic 35.0%
ATGCACGTGATGTTAACAAA+CGG + Chr4:69240774-69240793 MsG0480022169.01.T01:CDS 35.0%
ATGTGACAAGAAGTTTCAAC+TGG - Chr4:69243094-69243113 None:intergenic 35.0%
ATTGGATCATGGATACGATA+TGG + Chr4:69240676-69240695 MsG0480022169.01.T01:CDS 35.0%
CACTTCATCAACTGAAGTAA+TGG - Chr4:69240837-69240856 None:intergenic 35.0%
CCATATAATCGTTGTTCTCA+AGG - Chr4:69239807-69239826 None:intergenic 35.0%
CCCATCAAATAATGTAGGAA+GGG - Chr4:69241800-69241819 None:intergenic 35.0%
CCCTTCCTACATTATTTGAT+GGG + Chr4:69241797-69241816 MsG0480022169.01.T01:CDS 35.0%
CCTTGAGAACAACGATTATA+TGG + Chr4:69239804-69239823 MsG0480022169.01.T01:CDS 35.0%
CGAGAAGAATGTTTCAAGAA+GGG + Chr4:69238738-69238757 MsG0480022169.01.T01:five_prime_UTR 35.0%
CGGATAACAAAAATCACCAA+AGG + Chr4:69242758-69242777 MsG0480022169.01.T01:intron 35.0%
CTTCTTCTTCTTCATACTAC+AGG - Chr4:69241302-69241321 None:intergenic 35.0%
GAATATTCTGCACGATACAA+TGG + Chr4:69239552-69239571 MsG0480022169.01.T01:CDS 35.0%
GACAAAATGCCAAAAGATTG+TGG + Chr4:69243004-69243023 MsG0480022169.01.T01:CDS 35.0%
GACAAAGACATTAATCTTGG+TGG + Chr4:69241562-69241581 MsG0480022169.01.T01:CDS 35.0%
GATGAAAGTTTGAGGAAGAA+AGG + Chr4:69241184-69241203 MsG0480022169.01.T01:CDS 35.0%
GATGCACTCTTGTTGAAATT+TGG - Chr4:69241535-69241554 None:intergenic 35.0%
GCAACAATACTGAAAGTTTG+AGG + Chr4:69240921-69240940 MsG0480022169.01.T01:CDS 35.0%
GCATAATCTTCTCTACGAAT+GGG - Chr4:69238789-69238808 None:intergenic 35.0%
GCTAGTGTTATATCATGACT+CGG - Chr4:69240581-69240600 None:intergenic 35.0%
GGATAACAAAAACCACCAAA+AGG + Chr4:69242569-69242588 MsG0480022169.01.T01:CDS 35.0%
GGATAGCAAAAATGACCAAA+AGG + Chr4:69242215-69242234 MsG0480022169.01.T01:CDS 35.0%
GGATGACAAAAATCACCAAA+AGG + Chr4:69242377-69242396 MsG0480022169.01.T01:CDS 35.0%
GGATTATACAAGTGGATATG+TGG + Chr4:69239632-69239651 MsG0480022169.01.T01:intron 35.0%
GTCAAACGTGAAGAACATTT+GGG + Chr4:69238541-69238560 MsG0480022169.01.T01:five_prime_UTR 35.0%
GTCAGAATCTGCTTTATATG+AGG + Chr4:69240397-69240416 MsG0480022169.01.T01:CDS 35.0%
GTCTTGATGCATAATTACCA+AGG + Chr4:69239528-69239547 MsG0480022169.01.T01:CDS 35.0%
GTTTCAAGAAGGGATTGTTT+GGG + Chr4:69238748-69238767 MsG0480022169.01.T01:five_prime_UTR 35.0%
TACCATTGATCTTCTGCTTT+AGG + Chr4:69239035-69239054 MsG0480022169.01.T01:intron 35.0%
TAGGTTTACCGTAACAATGA+GGG + Chr4:69238640-69238659 MsG0480022169.01.T01:five_prime_UTR 35.0%
TATCATACATGAACCATCCT+TGG - Chr4:69242823-69242842 None:intergenic 35.0%
TATTGGAAGTGGATGTACAT+TGG + Chr4:69241639-69241658 MsG0480022169.01.T01:CDS 35.0%
TCAAACGTGAAGAACATTTG+GGG + Chr4:69238542-69238561 MsG0480022169.01.T01:five_prime_UTR 35.0%
TCCACTGAAGATAAATTCTG+TGG - Chr4:69241755-69241774 None:intergenic 35.0%
TCCATCATTTAATCCAGGAA+GGG - Chr4:69242538-69242557 None:intergenic 35.0%
TCCATCATTTAATGCAGGAA+AGG - Chr4:69242184-69242203 None:intergenic 35.0%
TCGAGAAGAATGTTTCAAGA+AGG + Chr4:69238737-69238756 MsG0480022169.01.T01:five_prime_UTR 35.0%
TCTGAATATTTAGGGAATGC+CGG + Chr4:69243055-69243074 MsG0480022169.01.T01:CDS 35.0%
TCTGACCCATCAAATAATGT+AGG - Chr4:69241805-69241824 None:intergenic 35.0%
TCTGATCCATCATTTAATGC+AGG - Chr4:69242189-69242208 None:intergenic 35.0%
TCTTCATTCCAAGTAGTTGA+GGG - Chr4:69242600-69242619 None:intergenic 35.0%
TGAAACTTCTTGTCACATTG+AGG + Chr4:69243096-69243115 MsG0480022169.01.T01:CDS 35.0%
TGAACTCTAACATCATCAGA+AGG - Chr4:69239874-69239893 None:intergenic 35.0%
TGCCTTGGATGATCTAAATA+CGG + Chr4:69241339-69241358 MsG0480022169.01.T01:CDS 35.0%
TGGTAATTATGCATCAAGAC+AGG - Chr4:69239528-69239547 None:intergenic 35.0%
TGTATTGTATGGTAGCAACA+GGG + Chr4:69240346-69240365 MsG0480022169.01.T01:CDS 35.0%
TGTTTCAAGAAGGGATTGTT+TGG + Chr4:69238747-69238766 MsG0480022169.01.T01:five_prime_UTR 35.0%
TTAGGTTTACCGTAACAATG+AGG + Chr4:69238639-69238658 MsG0480022169.01.T01:five_prime_UTR 35.0%
TTCTCCATTGAAGCTAAAGA+TGG + Chr4:69243031-69243050 MsG0480022169.01.T01:CDS 35.0%
TTGGATCATGGATACGATAT+GGG + Chr4:69240677-69240696 MsG0480022169.01.T01:CDS 35.0%
! AAAAGCAGTATCTCTGAAGA+CGG + Chr4:69242116-69242135 MsG0480022169.01.T01:CDS 35.0%
! AAAAGTAGCATCTCTGAAGA+TGG + Chr4:69242278-69242297 MsG0480022169.01.T01:CDS 35.0%
! AAGCTGAAGACAAAACCTTT+TGG - Chr4:69242395-69242414 None:intergenic 35.0%
! AAGCTGAGAACAAAACCTTT+TGG - Chr4:69241849-69241868 None:intergenic 35.0%
! AGAACATTTGGGGTATATGA+TGG + Chr4:69238552-69238571 MsG0480022169.01.T01:five_prime_UTR 35.0%
! AGAACCATCTTTAGCTTCAA+TGG - Chr4:69243038-69243057 None:intergenic 35.0%
! AGATCTCTTTGAAAATGCCT+TGG + Chr4:69241063-69241082 MsG0480022169.01.T01:CDS 35.0%
! ATCAATTAGTGAGGGTTGAT+GGG + Chr4:69239909-69239928 MsG0480022169.01.T01:intron 35.0%
! ATCTTTAGCTTCAATGGAGA+AGG - Chr4:69243032-69243051 None:intergenic 35.0%
! CAAGTTTAACTTTGGCTATC+TGG + Chr4:69239143-69239162 MsG0480022169.01.T01:CDS 35.0%
! CTCACTCTTTTTACTCACAT+TGG - Chr4:69241470-69241489 None:intergenic 35.0%
! GAGAGTTTTCATAACAAGGA+AGG + Chr4:69241880-69241899 MsG0480022169.01.T01:CDS 35.0%
! GCAGCTAACAAGTTTAACTT+TGG + Chr4:69239135-69239154 MsG0480022169.01.T01:CDS 35.0%
! GCATCTCGAAATATCTTTTC+AGG - Chr4:69239096-69239115 None:intergenic 35.0%
! TCATGCATTAATTGATGGAC+CGG + Chr4:69242347-69242366 MsG0480022169.01.T01:CDS 35.0%
! TCTGATGATGTTAGAGTTCA+TGG + Chr4:69239874-69239893 MsG0480022169.01.T01:CDS 35.0%
! TGACGAGAGTTTTCATAACA+AGG + Chr4:69241876-69241895 MsG0480022169.01.T01:CDS 35.0%
! TGGTCAGAGGATGATATTTT+CGG + Chr4:69239950-69239969 MsG0480022169.01.T01:intron 35.0%
! TTTTTGTCATCCACACATTC+CGG - Chr4:69242369-69242388 None:intergenic 35.0%
!! AAATGATGGATCAGAATGTG+CGG + Chr4:69242002-69242021 MsG0480022169.01.T01:CDS 35.0%
!! AACTGGAGCATTTTCATTAC+CGG - Chr4:69243077-69243096 None:intergenic 35.0%
!! AAGAGTGAGAATTTGTTGGT+TGG + Chr4:69241481-69241500 MsG0480022169.01.T01:CDS 35.0%
!! AGAGTGAGAATTTGTTGGTT+GGG + Chr4:69241482-69241501 MsG0480022169.01.T01:CDS 35.0%
!! AGATTGCTTTGAAAATGCCT+TGG + Chr4:69241324-69241343 MsG0480022169.01.T01:CDS 35.0%
!! AGGAAGTGCTTAAATGGAAT+GGG - Chr4:69240094-69240113 None:intergenic 35.0%
!! AGTTGATGAAGTGATGGAAA+TGG + Chr4:69240844-69240863 MsG0480022169.01.T01:CDS 35.0%
!! CGAAATATCTTTTCAGGAAG+GGG - Chr4:69239090-69239109 None:intergenic 35.0%
!! CTCGAAATATCTTTTCAGGA+AGG - Chr4:69239092-69239111 None:intergenic 35.0%
!! GTTTTCAAGGCTACTTCTAA+GGG + Chr4:69238860-69238879 MsG0480022169.01.T01:CDS 35.0%
!! TACTTCAGTTGATGAAGTGA+TGG + Chr4:69240838-69240857 MsG0480022169.01.T01:CDS 35.0%
!! TGATTGCTTTGAAAATGCCT+TGG + Chr4:69240979-69240998 MsG0480022169.01.T01:CDS 35.0%
!! TGGGTATGTTGGTGATTATT+TGG + Chr4:69239753-69239772 MsG0480022169.01.T01:CDS 35.0%
!! TGTTTTCAAGGCTACTTCTA+AGG + Chr4:69238859-69238878 MsG0480022169.01.T01:CDS 35.0%
AAATGCCTTGGAACACAACA+AGG + Chr4:69240991-69241010 MsG0480022169.01.T01:CDS 40.0%
AATGCACAGAAGGAGGAATA+TGG + Chr4:69240809-69240828 MsG0480022169.01.T01:CDS 40.0%
ACAACGAGGATGAAAGTTTG+AGG + Chr4:69241089-69241108 MsG0480022169.01.T01:CDS 40.0%
ACCCTTCCTGGATTAAATGA+TGG + Chr4:69242534-69242553 MsG0480022169.01.T01:CDS 40.0%
ACCTAAGAAATAGTGGTCAG+AGG + Chr4:69239937-69239956 MsG0480022169.01.T01:intron 40.0%
AGAGAAGATTATGCCCGATA+TGG + Chr4:69238795-69238814 MsG0480022169.01.T01:five_prime_UTR 40.0%
AGGGAATGCATACAAAACTC+TGG + Chr4:69240365-69240384 MsG0480022169.01.T01:CDS 40.0%
AGGTAGCAATATCGATCCTA+AGG + Chr4:69238883-69238902 MsG0480022169.01.T01:CDS 40.0%
ATCGTGCAGAATATTCTCCT+TGG - Chr4:69239548-69239567 None:intergenic 40.0%
ATTATATGGGCACACATCTC+AGG + Chr4:69239818-69239837 MsG0480022169.01.T01:CDS 40.0%
CAAGGAAGGTTCATGTATGA+TGG + Chr4:69241894-69241913 MsG0480022169.01.T01:CDS 40.0%
CATCAATTAGTGAGGGTTGA+TGG + Chr4:69239908-69239927 MsG0480022169.01.T01:intron 40.0%
CCAATATCAGAAGAAGGGAT+AGG - Chr4:69240461-69240480 None:intergenic 40.0%
CCTATCCCTTCTTCTGATAT+TGG + Chr4:69240458-69240477 MsG0480022169.01.T01:CDS 40.0%
CGACATGAACAAGTTAGAAC+CGG + Chr4:69239293-69239312 MsG0480022169.01.T01:CDS 40.0%
CTACGAATGGGATAAGAAGA+CGG - Chr4:69238777-69238796 None:intergenic 40.0%
CTCTTCATTCCAAGTAGTTG+AGG - Chr4:69242601-69242620 None:intergenic 40.0%
CTGATATTGGAAATAGTGGC+AGG + Chr4:69240471-69240490 MsG0480022169.01.T01:CDS 40.0%
CTGTATTGTATGGTAGCAAC+AGG + Chr4:69240345-69240364 MsG0480022169.01.T01:CDS 40.0%
GAAAAAGAAGAAGAGAGCGA+AGG - Chr4:69238073-69238092 None:intergenic 40.0%
GATACTGCAAATGGGTATGT+TGG + Chr4:69239742-69239761 MsG0480022169.01.T01:CDS 40.0%
GATGTTAGAGTTCATGGTGA+TGG + Chr4:69239880-69239899 MsG0480022169.01.T01:CDS 40.0%
GCCACAGAATTTATCTTCAG+TGG + Chr4:69241751-69241770 MsG0480022169.01.T01:CDS 40.0%
GCCCTTCCTACATTATTTGA+TGG + Chr4:69241796-69241815 MsG0480022169.01.T01:CDS 40.0%
GGACTATAATGTTCATCCCA+TGG + Chr4:69240541-69240560 MsG0480022169.01.T01:CDS 40.0%
GGATATTCTTGCAATGCCAT+GGG - Chr4:69240560-69240579 None:intergenic 40.0%
GGCATAATCTTCTCTACGAA+TGG - Chr4:69238790-69238809 None:intergenic 40.0%
GGTCAAACGTGAAGAACATT+TGG + Chr4:69238540-69238559 MsG0480022169.01.T01:five_prime_UTR 40.0%
GGTGAAGACCTAAGAAATAG+TGG + Chr4:69239930-69239949 MsG0480022169.01.T01:intron 40.0%
GTAAAGCAGCATAATCGGAA+CGG - Chr4:69238194-69238213 None:intergenic 40.0%
GTCCATCATTTAATCCAGGA+AGG - Chr4:69242539-69242558 None:intergenic 40.0%
TAATGTAGAAGCAGCATCTC+TGG + Chr4:69241918-69241937 MsG0480022169.01.T01:CDS 40.0%
TACCAAGGAAGGTTCATGTA+TGG + Chr4:69242437-69242456 MsG0480022169.01.T01:CDS 40.0%
TACGAATGGGATAAGAAGAC+GGG - Chr4:69238776-69238795 None:intergenic 40.0%
TCTCTCTGGATACTGCAAAT+GGG + Chr4:69239734-69239753 MsG0480022169.01.T01:CDS 40.0%
TCTGGTCCATCATTTAATCC+AGG - Chr4:69242543-69242562 None:intergenic 40.0%
TGAAGAGAGTTCTCATACCA+AGG + Chr4:69242614-69242633 MsG0480022169.01.T01:CDS 40.0%
TGAAGAGAGTTCTTGTACCA+AGG + Chr4:69242422-69242441 MsG0480022169.01.T01:CDS 40.0%
TGATGTTCCTCTCGCAAATT+GGG + Chr4:69240625-69240644 MsG0480022169.01.T01:CDS 40.0%
TGCACGTGATGTTAACAAAC+GGG + Chr4:69240775-69240794 MsG0480022169.01.T01:CDS 40.0%
TGTCAACAAAAAGCAAACGC+TGG + Chr4:69242156-69242175 MsG0480022169.01.T01:CDS 40.0%
TTACGACTTGCATTTGGCAA+TGG - Chr4:69241607-69241626 None:intergenic 40.0%
! AAGTGATGGAAATGGTTCGT+CGG + Chr4:69240852-69240871 MsG0480022169.01.T01:CDS 40.0%
! ATTTGATGGGTCAGAATGTG+CGG + Chr4:69241810-69241829 MsG0480022169.01.T01:CDS 40.0%
! CTAAGGCATTCACTTTGCTA+GGG + Chr4:69238900-69238919 MsG0480022169.01.T01:CDS 40.0%
! GTTGGAAGATCTTTTGGTCA+TGG + Chr4:69239381-69239400 MsG0480022169.01.T01:CDS 40.0%
! GTTTTCTTTTTGTCAACCGG+TGG - Chr4:69240886-69240905 None:intergenic 40.0%
! TCACCAGAAGTTTTTGTCCT+CGG + Chr4:69242035-69242054 MsG0480022169.01.T01:CDS 40.0%
! TCCTCTGACCACTATTTCTT+AGG - Chr4:69239941-69239960 None:intergenic 40.0%
! TTCAGTATTGTTGCGCTGAT+TGG - Chr4:69240915-69240934 None:intergenic 40.0%
! TTCATCCTTGTTGTGTTCCA+AGG - Chr4:69240999-69241018 None:intergenic 40.0%
!! AAATGATGGACCAGAATGTG+TGG + Chr4:69242548-69242567 MsG0480022169.01.T01:CDS 40.0%
!! AGATTGCTCTGAAAATGCCT+TGG + Chr4:69241150-69241169 MsG0480022169.01.T01:CDS 40.0%
!! CAGGAAGTGCTTAAATGGAA+TGG - Chr4:69240095-69240114 None:intergenic 40.0%
!! CTTGGAGTGGATTATACAAG+TGG + Chr4:69239624-69239643 MsG0480022169.01.T01:intron 40.0%
!! GATTGCTCTGAAAATGCCTT+GGG + Chr4:69241151-69241170 MsG0480022169.01.T01:CDS 40.0%
!! TCAGTATTGTTGCGCTGATT+GGG - Chr4:69240914-69240933 None:intergenic 40.0%
!! TTGCACAGGAAGTGCTTAAA+TGG - Chr4:69240100-69240119 None:intergenic 40.0%
AAACTCAAGTCACCAGTCAG+AGG + Chr4:69241032-69241051 MsG0480022169.01.T01:CDS 45.0%
AAATGCCTTGGAACACAACG+AGG + Chr4:69241075-69241094 MsG0480022169.01.T01:CDS 45.0%
AAATGCCTTGGGACACAATG+AGG + Chr4:69241162-69241181 MsG0480022169.01.T01:CDS 45.0%
AACCACAACAACAATGCTCG+CGG + Chr4:69238671-69238690 MsG0480022169.01.T01:five_prime_UTR 45.0%
AAGCCGAGGACAAAAACTTC+TGG - Chr4:69242041-69242060 None:intergenic 45.0%
ACATCAGAGCAGTACTCAGT+TGG + Chr4:69239354-69239373 MsG0480022169.01.T01:CDS 45.0%
ACTTTGGCTATCTGGAGATC+AGG + Chr4:69239151-69239170 MsG0480022169.01.T01:CDS 45.0%
AGATTGCTCGGAGAATGTCT+TGG + Chr4:69241237-69241256 MsG0480022169.01.T01:CDS 45.0%
AGGAGCTGACGAAGACTTTA+AGG - Chr4:69240441-69240460 None:intergenic 45.0%
AGGGATACAATATCCTGCTC+AGG + Chr4:69238919-69238938 MsG0480022169.01.T01:CDS 45.0%
AGTTCTGTATGCACGAGTTG+TGG - Chr4:69240278-69240297 None:intergenic 45.0%
ATCTCTCTTCTTCCTCTGAC+TGG - Chr4:69241047-69241066 None:intergenic 45.0%
ATCTGCCTGTCTTCTACAAC+AGG + Chr4:69240006-69240025 MsG0480022169.01.T01:intron 45.0%
ATCTTCAGTGGAGGAGAGAA+AGG + Chr4:69241763-69241782 MsG0480022169.01.T01:CDS 45.0%
ATGCTCCTGGCTTAAACTTC+AGG + Chr4:69240156-69240175 MsG0480022169.01.T01:CDS 45.0%
CAAAGAAGGTCTTCTGAGCT+TGG + Chr4:69239606-69239625 MsG0480022169.01.T01:intron 45.0%
CAAGGAAGGTTCATGTATGG+TGG + Chr4:69242440-69242459 MsG0480022169.01.T01:CDS 45.0%
CACCATACATGAACCTTCCT+TGG - Chr4:69242442-69242461 None:intergenic 45.0%
CACCATACATGAACTTCCCT+CGG - Chr4:69242088-69242107 None:intergenic 45.0%
CAGAAACAATGCACAGAAGG+AGG + Chr4:69240802-69240821 MsG0480022169.01.T01:CDS 45.0%
CATACAAAACTCTGGCCAGT+TGG + Chr4:69240373-69240392 MsG0480022169.01.T01:CDS 45.0%
CATGAACAAGTTAGAACCGG+AGG + Chr4:69239296-69239315 MsG0480022169.01.T01:CDS 45.0%
CCTAGCAAAGTGAATGCCTT+AGG - Chr4:69238902-69238921 None:intergenic 45.0%
CGGAAGGAATTCAACGAGTA+GGG + Chr4:69240250-69240269 MsG0480022169.01.T01:CDS 45.0%
CGGATATTCTTGCAATGCCA+TGG - Chr4:69240561-69240580 None:intergenic 45.0%
CTACACCAGCAGAGAATGAT+CGG - Chr4:69238279-69238298 None:intergenic 45.0%
CTCATACCAAGGAAGGTTCA+CGG + Chr4:69242625-69242644 MsG0480022169.01.T01:CDS 45.0%
CTCTCTCTGGATACTGCAAA+TGG + Chr4:69239733-69239752 MsG0480022169.01.T01:CDS 45.0%
CTGATGTTCCTCTCGCAAAT+TGG + Chr4:69240624-69240643 MsG0480022169.01.T01:CDS 45.0%
CTGTATGATTCAGATGCTCC+TGG + Chr4:69240143-69240162 MsG0480022169.01.T01:CDS 45.0%
CTTTCTCCATCAACCAACTG+CGG + Chr4:69240230-69240249 MsG0480022169.01.T01:CDS 45.0%
GAAGAGAGTTCTCATACCGA+GGG + Chr4:69242069-69242088 MsG0480022169.01.T01:CDS 45.0%
GAAGCTGAGGACAAAACCTT+TGG - Chr4:69242777-69242796 None:intergenic 45.0%
GAATGTCTTGGAACACAACG+AGG + Chr4:69241249-69241268 MsG0480022169.01.T01:CDS 45.0%
GAGAGTTCTCATACCAAGGA+AGG + Chr4:69242618-69242637 MsG0480022169.01.T01:CDS 45.0%
GAGAGTTCTTGTACCAAGGA+AGG + Chr4:69242426-69242445 MsG0480022169.01.T01:CDS 45.0%
GAGGACAAAAACTTCTGGTG+AGG - Chr4:69242036-69242055 None:intergenic 45.0%
GGATACGATATGGGATGTCA+TGG + Chr4:69240686-69240705 MsG0480022169.01.T01:CDS 45.0%
GGCAGGTCATCAATTAGTGA+GGG + Chr4:69239901-69239920 MsG0480022169.01.T01:intron 45.0%
GGTATGCGCTTGTACATGAT+TGG + Chr4:69239172-69239191 MsG0480022169.01.T01:intron 45.0%
GGTCATGGAATGCTTGATGA+AGG + Chr4:69239396-69239415 MsG0480022169.01.T01:CDS 45.0%
GTCTTCATTGCAAGAAGCTG+AGG - Chr4:69242247-69242266 None:intergenic 45.0%
TACCGAGGGAAGTTCATGTA+TGG + Chr4:69242083-69242102 MsG0480022169.01.T01:CDS 45.0%
TCATACCAAGGAAGGTTCAC+GGG + Chr4:69242626-69242645 MsG0480022169.01.T01:CDS 45.0%
TCTTCAGTGGAGGAGAGAAA+GGG + Chr4:69241764-69241783 MsG0480022169.01.T01:CDS 45.0%
TGAAGACAGCTCTCATACCA+AGG + Chr4:69242803-69242822 MsG0480022169.01.T01:intron 45.0%
TGAAGAGAGTTCTCATACCG+AGG + Chr4:69242068-69242087 MsG0480022169.01.T01:CDS 45.0%
TGCAGTATCCAGAGAGAGTT+TGG - Chr4:69239731-69239750 None:intergenic 45.0%
TGGCAAGAAAAGATGACAGC+AGG + Chr4:69239773-69239792 MsG0480022169.01.T01:CDS 45.0%
TGGCAGGTCATCAATTAGTG+AGG + Chr4:69239900-69239919 MsG0480022169.01.T01:intron 45.0%
TTAGGCCTGTTGTAGAAGAC+AGG - Chr4:69240014-69240033 None:intergenic 45.0%
TTCATCCTCATTGTGTCCCA+AGG - Chr4:69241170-69241189 None:intergenic 45.0%
TTCATCCTCGTTGTGTTCCA+AGG - Chr4:69241083-69241102 None:intergenic 45.0%
TTGTTCCGATCATTCTCTGC+TGG + Chr4:69238271-69238290 MsG0480022169.01.T01:five_prime_UTR 45.0%
! AATTGATGGACCGGAATGTG+TGG + Chr4:69242356-69242375 MsG0480022169.01.T01:CDS 45.0%
! CCTAAGGCATTCACTTTGCT+AGG + Chr4:69238899-69238918 MsG0480022169.01.T01:CDS 45.0%
! GAGAAGGAGCCACAATCTTT+TGG - Chr4:69243016-69243035 None:intergenic 45.0%
! GCTGGAAGATCTTTTGGTCA+TGG + Chr4:69239450-69239469 MsG0480022169.01.T01:CDS 45.0%
! GGCGAAGTTGGAAGATCTTT+TGG + Chr4:69239375-69239394 MsG0480022169.01.T01:CDS 45.0%
! TAGTTGAGGGCAAAGCCTTT+TGG - Chr4:69242587-69242606 None:intergenic 45.0%
! TTCAAGGCTACTTCTAAGGG+AGG + Chr4:69238863-69238882 MsG0480022169.01.T01:CDS 45.0%
! TTCAGGCAGCTACCATCTTT+TGG + Chr4:69240173-69240192 MsG0480022169.01.T01:CDS 45.0%
!! TGATTTCAAGCGTCGAAGCA+AGG + Chr4:69241411-69241430 MsG0480022169.01.T01:CDS 45.0%
!! TTAGAGTTCATGGTGATGGC+AGG + Chr4:69239884-69239903 MsG0480022169.01.T01:CDS 45.0%
!!! AGAGGAGGAGGTTTTAGGTT+TGG - Chr4:69238035-69238054 None:intergenic 45.0%
!!! AGGTTTTAGGTTTGGTGAGC+GGG - Chr4:69238027-69238046 None:intergenic 45.0%
!!! GAGGTTTTAGGTTTGGTGAG+CGG - Chr4:69238028-69238047 None:intergenic 45.0%
!! TATGTATATAAAAAAATAAA+AGG - Chr4:69238146-69238165 None:intergenic 5.0%
AAACCTCCTCCTCTCTCCAT+AGG + Chr4:69238041-69238060 MsG0480022169.01.T01:five_prime_UTR 50.0%
AAGCAGATTCTGACGCCAAC+TGG - Chr4:69240391-69240410 None:intergenic 50.0%
AAGGGAAGGGAGAGAAGAGA+CGG - Chr4:69238004-69238023 None:intergenic 50.0%
AAGGGAGAGAAGAGACGGTT+CGG - Chr4:69237999-69238018 None:intergenic 50.0%
AAGGTCTTCTGAGCTTGGAG+TGG + Chr4:69239611-69239630 MsG0480022169.01.T01:intron 50.0%
ACGGATTCCACAACTGTGAC+TGG + Chr4:69241358-69241377 MsG0480022169.01.T01:CDS 50.0%
AGCACTTCCTGTGCAACACA+AGG + Chr4:69240104-69240123 MsG0480022169.01.T01:CDS 50.0%
AGCTGCCTGAAGTTTAAGCC+AGG - Chr4:69240164-69240183 None:intergenic 50.0%
AGGCTTTGCCCTCAACTACT+TGG + Chr4:69242589-69242608 MsG0480022169.01.T01:CDS 50.0%
AGTTAGAACCGGAGGTTCCT+AGG + Chr4:69239304-69239323 MsG0480022169.01.T01:CDS 50.0%
ATTGCCTCCAGTCACAGTTG+TGG - Chr4:69241368-69241387 None:intergenic 50.0%
CAATGCTCGCGGAAAAGATC+CGG + Chr4:69238682-69238701 MsG0480022169.01.T01:five_prime_UTR 50.0%
CAGTACTCAGTTGGCGAAGT+TGG + Chr4:69239363-69239382 MsG0480022169.01.T01:CDS 50.0%
CATCTCAGGCCATACAGTGT+AGG + Chr4:69239832-69239851 MsG0480022169.01.T01:CDS 50.0%
CCATTAGAGCCGTACTCAGT+AGG + Chr4:69239423-69239442 MsG0480022169.01.T01:CDS 50.0%
CGAGGGAAGTTCATGTATGG+TGG + Chr4:69242086-69242105 MsG0480022169.01.T01:CDS 50.0%
CGTTGAATTCCTTCCGCAGT+TGG - Chr4:69240246-69240265 None:intergenic 50.0%
CTATGCTGCCAAACTCTCTC+TGG + Chr4:69239720-69239739 MsG0480022169.01.T01:CDS 50.0%
CTCTTCATTGCAAGAAGCCG+AGG - Chr4:69242055-69242074 None:intergenic 50.0%
GAAGACAGGCAGATCGACAT+TGG - Chr4:69240000-69240019 None:intergenic 50.0%
GACAGCTCTCATACCAAGGA+TGG + Chr4:69242807-69242826 MsG0480022169.01.T01:intron 50.0%
GATTCCACAACTGTGACTGG+AGG + Chr4:69241361-69241380 MsG0480022169.01.T01:CDS 50.0%
GCGGAAGGAATTCAACGAGT+AGG + Chr4:69240249-69240268 MsG0480022169.01.T01:CDS 50.0%
GCGTATCCACCTACACTGTA+TGG - Chr4:69239844-69239863 None:intergenic 50.0%
TTCAGCTCCTTGTGTTGCAC+AGG - Chr4:69240114-69240133 None:intergenic 50.0%
TTCCTTCCGCAGTTGGTTGA+TGG - Chr4:69240239-69240258 None:intergenic 50.0%
! AAGCCTTATCCCACCAAGTG+GGG + Chr4:69242851-69242870 MsG0480022169.01.T01:intron 50.0%
! AGAAGCAGCATCTCTGGAGA+AGG + Chr4:69241924-69241943 MsG0480022169.01.T01:CDS 50.0%
! CAAGCCTTATCCCACCAAGT+GGG + Chr4:69242850-69242869 MsG0480022169.01.T01:intron 50.0%
! CCTACTGAGTACGGCTCTAA+TGG - Chr4:69239426-69239445 None:intergenic 50.0%
! CGCGGAAAAGATCCGGTTTT+CGG + Chr4:69238689-69238708 MsG0480022169.01.T01:five_prime_UTR 50.0%
! GGCGAAGCTGGAAGATCTTT+TGG + Chr4:69239444-69239463 MsG0480022169.01.T01:CDS 50.0%
! TGGAGAGAGGAGGAGGTTTT+AGG - Chr4:69238040-69238059 None:intergenic 50.0%
! TTCCGCGAGCATTGTTGTTG+TGG - Chr4:69238676-69238695 None:intergenic 50.0%
! TTGAGGGCAAAGCCTTTTGG+TGG - Chr4:69242584-69242603 None:intergenic 50.0%
!! TTAGGTTTGGTGAGCGGGAA+GGG - Chr4:69238022-69238041 None:intergenic 50.0%
!! TTGTTGCGCTGATTGGGTGT+TGG - Chr4:69240908-69240927 None:intergenic 50.0%
!! TTTAGGTTTGGTGAGCGGGA+AGG - Chr4:69238023-69238042 None:intergenic 50.0%
AACCGGAGGTTCCTAGGAGA+CGG + Chr4:69239310-69239329 MsG0480022169.01.T01:CDS 55.0%
AGGTACACGCCTATGGAGAG+AGG - Chr4:69238053-69238072 None:intergenic 55.0%
ATCCGTCTCCTAGGAACCTC+CGG - Chr4:69239315-69239334 None:intergenic 55.0%
CAAGGAAGGTTCACGGGTGA+TGG + Chr4:69242632-69242651 MsG0480022169.01.T01:CDS 55.0%
CATCACCCGTGAACCTTCCT+TGG - Chr4:69242634-69242653 None:intergenic 55.0%
CCAGCTTCGCCTACTGAGTA+CGG - Chr4:69239435-69239454 None:intergenic 55.0%
CTCAGGCCATACAGTGTAGG+TGG + Chr4:69239835-69239854 MsG0480022169.01.T01:CDS 55.0%
CTCCATCAACCAACTGCGGA+AGG + Chr4:69240234-69240253 MsG0480022169.01.T01:CDS 55.0%
CTTATCCCACCAAGTGGGGT+CGG + Chr4:69242855-69242874 MsG0480022169.01.T01:intron 55.0%
GCAATTGCTGACACCCTTCC+TGG + Chr4:69242522-69242541 MsG0480022169.01.T01:CDS 55.0%
GCATAATCGGAACGGCGCAA+CGG - Chr4:69238186-69238205 None:intergenic 55.0%
TACACGCCTATGGAGAGAGG+AGG - Chr4:69238050-69238069 None:intergenic 55.0%
TTCGTCGGAGTCAAAGCCAC+CGG + Chr4:69240867-69240886 MsG0480022169.01.T01:CDS 55.0%
TTTGGTGAGCGGGAAGGGAA+GGG - Chr4:69238017-69238036 None:intergenic 55.0%
! AGAGCGAAGGTACACGCCTA+TGG - Chr4:69238060-69238079 None:intergenic 55.0%
! CCAAGCCTTATCCCACCAAG+TGG + Chr4:69242849-69242868 MsG0480022169.01.T01:intron 55.0%
! CCACTTGGTGGGATAAGGCT+TGG - Chr4:69242852-69242871 None:intergenic 55.0%
! GCTCTAGACATCCGTCTCCT+AGG - Chr4:69239324-69239343 None:intergenic 55.0%
!! TAACGGGTTCTCACCTGAGC+AGG - Chr4:69238935-69238954 None:intergenic 55.0%
!! TCAAGCGTCGAAGCAAGGTG+AGG + Chr4:69241416-69241435 MsG0480022169.01.T01:CDS 55.0%
ACGCCTATGGAGAGAGGAGG+AGG - Chr4:69238047-69238066 None:intergenic 60.0%
CCGTACTCAGTAGGCGAAGC+TGG + Chr4:69239432-69239451 MsG0480022169.01.T01:CDS 60.0%
! CGACCCCACTTGGTGGGATA+AGG - Chr4:69242857-69242876 None:intergenic 60.0%
! GGAGAGAAGAGACGGTTCGG+TGG - Chr4:69237996-69238015 None:intergenic 60.0%
! GTTTGGTGAGCGGGAAGGGA+AGG - Chr4:69238018-69238037 None:intergenic 60.0%
CCAAGTGGGGTCGGCAAGGA+AGG + Chr4:69242864-69242883 MsG0480022169.01.T01:intron 65.0%
CCTTCCTTGCCGACCCCACT+TGG - Chr4:69242867-69242886 None:intergenic 65.0%
CCTTGCCGACCCCACTTGGT+GGG - Chr4:69242863-69242882 None:intergenic 65.0%
TCCTTGCCGACCCCACTTGG+TGG - Chr4:69242864-69242883 None:intergenic 65.0%
!! CGGTTCGGTGGCAGCGCAAT+AGG - Chr4:69237984-69238003 None:intergenic 65.0%
CCCACCAAGTGGGGTCGGCA+AGG + Chr4:69242860-69242879 MsG0480022169.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 69237913 69243129 69237913 ID=MsG0480022169.01;Name=MsG0480022169.01
Chr4 mRNA 69237913 69243129 69237913 ID=MsG0480022169.01.T01;Parent=MsG0480022169.01;Name=MsG0480022169.01.T01;_AED=0.47;_eAED=0.47;_QI=926|0.2|0.16|1|1|1|6|0|1222
Chr4 exon 69237913 69238940 69237913 ID=MsG0480022169.01.T01:exon:55496;Parent=MsG0480022169.01.T01
Chr4 exon 69239057 69239182 69239057 ID=MsG0480022169.01.T01:exon:55497;Parent=MsG0480022169.01.T01
Chr4 exon 69239270 69239596 69239270 ID=MsG0480022169.01.T01:exon:55498;Parent=MsG0480022169.01.T01
Chr4 exon 69239685 69239905 69239685 ID=MsG0480022169.01.T01:exon:55499;Parent=MsG0480022169.01.T01
Chr4 exon 69240028 69242717 69240028 ID=MsG0480022169.01.T01:exon:55500;Parent=MsG0480022169.01.T01
Chr4 exon 69242927 69243129 69242927 ID=MsG0480022169.01.T01:exon:55501;Parent=MsG0480022169.01.T01
Chr4 five_prime_UTR 69237913 69238838 69237913 ID=MsG0480022169.01.T01:five_prime_utr;Parent=MsG0480022169.01.T01
Chr4 CDS 69238839 69238940 69238839 ID=MsG0480022169.01.T01:cds;Parent=MsG0480022169.01.T01
Chr4 CDS 69239057 69239182 69239057 ID=MsG0480022169.01.T01:cds;Parent=MsG0480022169.01.T01
Chr4 CDS 69239270 69239596 69239270 ID=MsG0480022169.01.T01:cds;Parent=MsG0480022169.01.T01
Chr4 CDS 69239685 69239905 69239685 ID=MsG0480022169.01.T01:cds;Parent=MsG0480022169.01.T01
Chr4 CDS 69240028 69242717 69240028 ID=MsG0480022169.01.T01:cds;Parent=MsG0480022169.01.T01
Chr4 CDS 69242927 69243129 69242927 ID=MsG0480022169.01.T01:cds;Parent=MsG0480022169.01.T01
Gene Sequence

>MsG0480022169.01.T01

ATGAAAGAATTACTTCATGGTGTTTTCAAGGCTACTTCTAAGGGAGGTAGCAATATCGATCCTAAGGCATTCACTTTGCTAGGGATACAATATCCTGCTCAGGTTAAGTTCACTGAGATTTGGAAATGTAAACCCCTTCCTGAAAAGATATTTCGAGATGCAATCAGAGAGAATTACTTTGCAGCTAACAAGTTTAACTTTGGCTATCTGGAGATCAGGTATGCGCTTGTCAATAAACTTCTACATTTGTTCGACATGAACAAGTTAGAACCGGAGGTTCCTAGGAGACGGATGTCTAGAGCAGATGATATGACATCAGAGCAGTACTCAGTTGGCGAAGTTGGAAGATCTTTTGGTCATGGAATGCTTGATGAAGGTGTTCCATTAGAGCCGTACTCAGTAGGCGAAGCTGGAAGATCTTTTGGTCATGGAATGCTTGATGAAAATGTTCAAAATGACAGAGTTTTGGGTGATAAAAGTTCACCTGTCTTGATGCATAATTACCAAGGAGAATATTCTGCACGATACAATGGATTCAGTGCAGATGATATTTTACTTGCTGCACGCAACAATGCAGATTATTTAGATAACTATGCTGCCAAACTCTCTCTGGATACTGCAAATGGGTATGTTGGTGATTATTTGGCAAGAAAAGATGACAGCAGGTTTACGTCCCTTGAGAACAACGATTATATGGGCACACATCTCAGGCCATACAGTGTAGGTGGATACGCCGACATTCCTTCTGATGATGTTAGAGTTCATGGTGATGGCAGGCCTAATTTAGAGCAAAGTTCTTTGGTTGAAAATCATTGCAGTTCAACTTCTGCTATGATTCACCCATTCCATTTAAGCACTTCCTGTGCAACACAAGGAGCTGAAAGTTCTATTCTGTATGATTCAGATGCTCCTGGCTTAAACTTCAGGCAGCTACCATCTTTTGGAATTAATAATGGTTCTGAGTCAATAACAGAAAGACTTTCTCCATCAACCAACTGCGGAAGGAATTCAACGAGTAGGGAACCACAACTCGTGCATACAGAACTCAAAGACAAATACAGATGGCACAATATTGGTGATTGTTTTCCAAATTCTGTATTGTATGGTAGCAACAGGGAATGCATACAAAACTCTGGCCAGTTGGCGTCAGAATCTGCTTTATATGAGGCTCGCAGTAACATTTTTTCCTTAAAGTCTTCGTCAGCTCCTATCCCTTCTTCTGATATTGGAAATAGTGGCAGGACACATGAGCCATTTTCTTCACTGTTTGATAATCACAAATCATATTTGGACTATAATGTTCATCCCATGGCATTGCAAGAATATCCGAGTCATGATATAACACTAGCAATGAACAATGGAACATTAAGTTCTGATGTTCCTCTCGCAAATTGGGATAATTTTCAAGTCCAATATGATGATTCATTGGATCATGGATACGATATGGGATGTCATGGTGATTCTCAAAATAGCAATCATGGCCATCCAAATAAAAAAAGTAGTGTGTTTTCTCGTATATCTTATGCACGTGATGTTAACAAACGGGAAAACAGAAACAATGCACAGAAGGAGGAATATGGTTCCATTACTTCAGTTGATGAAGTGATGGAAATGGTTCGTCGGAGTCAAAGCCACCGGTTGACAAAAAGAAAACCAACACCCAATCAGCGCAACAATACTGAAAGTTTGAGGAATAAAACTCAACTCAGTAGTCAGAGCAAGAAGAATGATTGCTTTGAAAATGCCTTGGAACACAACAAGGATGAAAGCTTAAGGAATAAAACTCAAGTCACCAGTCAGAGGAAGAAGAGAGATCTCTTTGAAAATGCCTTGGAACACAACGAGGATGAAAGTTTGAGGAGTAAAACTCAAATCAGTAGTTTGAAAAAGGAGAAAAGAGATTGCTCTGAAAATGCCTTGGGACACAATGAGGATGAAAGTTTGAGGAAGAAAGGTCGAATCATTAGTCTGAAAACGAAGAAAAGAGATTGCTCGGAGAATGTCTTGGAACACAACGAGGATGAAAGTTTGAGGTATAAAACGCAAACCTGTAGTATGAAGAAGAAGAAGAGAGATTGCTTTGAAAATGCCTTGGATGATCTAAATACGGATTCCACAACTGTGACTGGAGGCAATCCTAATACAACAACCAAAGTTGTTGATTTCAAGCGTCGAAGCAAGGTGAGGAAACATAGTGATGAGATTGAGAGAAGCTCCAATGTGAGTAAAAAGAGTGAGAATTTGTTGGTTGGGCAGCAAAAGAGAAGAAAGTTGATTCGCCCAAATTTCAACAAGAGTGCATCTTGTGAAGACAAAGACATTAATCTTGGTGGTTCTCAAAATTTACAACTACCATTGCCAAATGCAAGTCGTAATCATAAAGATGTTATTGGAAGTGGATGTACATTGGTGAACCAGTGTGATTATGATGTTAAAACAGATGCTGAAGTTCAAAACATCAATTATCAAACACAATCTGAAGTTAAGAATAGTAGTCACGCCACAGAATTTATCTTCAGTGGAGGAGAGAAAGGGAACGTTGTCGCCCTTCCTACATTATTTGATGGGTCAGAATGTGCGGATAATAAAAATCACCAAAAGGTTTTGTTCTCAGCTTCTTGCAGTGACGAGAGTTTTCATAACAAGGAAGGTTCATGTATGATGGATAATGTAGAAGCAGCATCTCTGGAGAAGGAATCGTTGCGTGCAATTTGTCAAGAAAAAGCAAATGTTGGCACCCTTCCTGAATTAAATGATGGATCAGAATGTGCGGATAACAAACCTCACCAGAAGTTTTTGTCCTCGGCTTCTTGCAATGAAGAGAGTTCTCATACCGAGGGAAGTTCATGTATGGTGGATAATGTAAAAGCAGTATCTCTGAAGACGGAATCATTGCATGCACTTTGTCAACAAAAAGCAAACGCTGGCACCTTTCCTGCATTAAATGATGGATCAGAATGTGCGGATAGCAAAAATGACCAAAAGGTTTTGTTCTCAGCTTCTTGCAATGAAGACAGTTGTCTAGAAAAAGTAGCATCTCTGAAGATGGAATCATTGCATACAATTTGTCTAGAAAAAGTGAATGTTAGCACTGTTCATGCATTAATTGATGGACCGGAATGTGTGGATGACAAAAATCACCAAAAGGTTTTGTCTTCAGCTTCTTGCAATGAAGAGAGTTCTTGTACCAAGGAAGGTTCATGTATGGTGGATAATGTAAAAGAAGCATCTCTGAAGATTGAATCATTGCATGCAGTTTGTCAAGAAAAAGCAATTGCTGACACCCTTCCTGGATTAAATGATGGACCAGAATGTGTGGATAACAAAAACCACCAAAAGGCTTTGCCCTCAACTACTTGGAATGAAGAGAGTTCTCATACCAAGGAAGGTTCACGGGTGATGGTTAATGTGAAAGAAGCATCTCTGAAGACAGAATCATTGCATGCAGTTTCTCAAGAAAGCAAATACAGAATCATTGAATGCAATTTGTCAGAAAATAATGCAGATAAGATCATATGTGCTGACAGATGTATTAATGCCAATGACAAAATGCCAAAAGATTGTGGCTCCTTCTCCATTGAAGCTAAAGATGGTTCTGAATATTTAGGGAATGCCGGTAATGAAAATGCTCCAGTTGAAACTTCTTGTCACATTGAGGCTTGCATGTAG

Protein sequence

>MsG0480022169.01.T01

MKELLHGVFKATSKGGSNIDPKAFTLLGIQYPAQVKFTEIWKCKPLPEKIFRDAIRENYFAANKFNFGYLEIRYALVNKLLHLFDMNKLEPEVPRRRMSRADDMTSEQYSVGEVGRSFGHGMLDEGVPLEPYSVGEAGRSFGHGMLDENVQNDRVLGDKSSPVLMHNYQGEYSARYNGFSADDILLAARNNADYLDNYAAKLSLDTANGYVGDYLARKDDSRFTSLENNDYMGTHLRPYSVGGYADIPSDDVRVHGDGRPNLEQSSLVENHCSSTSAMIHPFHLSTSCATQGAESSILYDSDAPGLNFRQLPSFGINNGSESITERLSPSTNCGRNSTSREPQLVHTELKDKYRWHNIGDCFPNSVLYGSNRECIQNSGQLASESALYEARSNIFSLKSSSAPIPSSDIGNSGRTHEPFSSLFDNHKSYLDYNVHPMALQEYPSHDITLAMNNGTLSSDVPLANWDNFQVQYDDSLDHGYDMGCHGDSQNSNHGHPNKKSSVFSRISYARDVNKRENRNNAQKEEYGSITSVDEVMEMVRRSQSHRLTKRKPTPNQRNNTESLRNKTQLSSQSKKNDCFENALEHNKDESLRNKTQVTSQRKKRDLFENALEHNEDESLRSKTQISSLKKEKRDCSENALGHNEDESLRKKGRIISLKTKKRDCSENVLEHNEDESLRYKTQTCSMKKKKRDCFENALDDLNTDSTTVTGGNPNTTTKVVDFKRRSKVRKHSDEIERSSNVSKKSENLLVGQQKRRKLIRPNFNKSASCEDKDINLGGSQNLQLPLPNASRNHKDVIGSGCTLVNQCDYDVKTDAEVQNINYQTQSEVKNSSHATEFIFSGGEKGNVVALPTLFDGSECADNKNHQKVLFSASCSDESFHNKEGSCMMDNVEAASLEKESLRAICQEKANVGTLPELNDGSECADNKPHQKFLSSASCNEESSHTEGSSCMVDNVKAVSLKTESLHALCQQKANAGTFPALNDGSECADSKNDQKVLFSASCNEDSCLEKVASLKMESLHTICLEKVNVSTVHALIDGPECVDDKNHQKVLSSASCNEESSCTKEGSCMVDNVKEASLKIESLHAVCQEKAIADTLPGLNDGPECVDNKNHQKALPSTTWNEESSHTKEGSRVMVNVKEASLKTESLHAVSQESKYRIIECNLSENNADKIICADRCINANDKMPKDCGSFSIEAKDGSEYLGNAGNENAPVETSCHIEACM*