AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007496.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007496.01.T01 MTR_2g026390 83.871 279 6 1 17 256 29 307 1.94e-164 473
MsG0280007496.01.T01 MTR_3g058500 44.815 270 110 5 17 247 27 296 5.02e-64 212
MsG0280007496.01.T01 MTR_5g055210 31.765 255 144 6 17 247 42 290 1.20e-34 132
MsG0280007496.01.T01 MTR_5g055210 42.308 130 73 2 118 247 58 185 1.25e-27 112
MsG0280007496.01.T01 MTR_5g055210 41.284 109 62 2 139 247 1 107 1.73e-19 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007496.01.T01 AT5G55600 39.273 275 124 2 17 248 27 301 3.96e-62 207
MsG0280007496.01.T01 AT5G55600 39.273 275 124 2 17 248 27 301 3.96e-62 207
MsG0280007496.01.T01 AT5G55600 39.273 275 124 2 17 248 27 301 3.96e-62 207
MsG0280007496.01.T01 AT1G68580 30.075 266 147 7 17 252 29 285 1.12e-27 111
MsG0280007496.01.T01 AT1G68580 41.481 135 77 2 118 252 57 189 1.78e-27 110
MsG0280007496.01.T01 AT1G68580 29.412 272 141 7 17 252 29 285 2.19e-27 111
MsG0280007496.01.T01 AT1G68580 41.481 135 77 2 118 252 107 239 7.61e-27 109
MsG0280007496.01.T01 AT1G68580 41.481 135 77 2 118 252 57 189 7.67e-27 109

Find 88 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTCATTTGTGTATATTA+TGG 0.207594 2:-16257619 MsG0280007496.01.T01:CDS
CTACTAACGTTGTTTATAAA+TGG 0.214973 2:-16260495 MsG0280007496.01.T01:CDS
CGGACAGTCCGCCTTTCTTT+TGG 0.249468 2:+16257216 None:intergenic
AGTAACCAGCCTATACTTTC+TGG 0.267064 2:-16257258 MsG0280007496.01.T01:CDS
TGGTTCTATACCAGTTTATC+AGG 0.278923 2:+16258227 None:intergenic
AAAAGGAGGTTTGAAGAAAA+TGG 0.288246 2:+16261192 None:intergenic
CTGAGATCCATGTATGTTCT+AGG 0.288673 2:-16257335 MsG0280007496.01.T01:CDS
TTCCTAAACCAACCCTAAAT+TGG 0.291254 2:+16260812 None:intergenic
TTCCCACCATCTTCAAATTT+CGG 0.300490 2:+16257196 None:intergenic
CACCAATTTAGGGTTGGTTT+AGG 0.328851 2:-16260814 MsG0280007496.01.T01:five_prime_UTR
TTTCATCACACCTAATGTTC+AGG 0.361881 2:-16257451 MsG0280007496.01.T01:CDS
GATTCGGTGCTAGCTGTTGT+GGG 0.371308 2:-16260583 MsG0280007496.01.T01:CDS
TGTTGACTGGCTCAACCATT+TGG 0.374513 2:-16260455 MsG0280007496.01.T01:CDS
AAACAACAAAACAAGGATTA+AGG 0.374788 2:+16261054 None:intergenic
TTCAGCAAATGCTGCAGGAC+TGG 0.376226 2:-16258300 MsG0280007496.01.T01:CDS
TCCACAACATAAACGTCATA+TGG 0.378075 2:-16261095 MsG0280007496.01.T01:five_prime_UTR
GCACTGATCACCTGAACATT+AGG 0.397724 2:+16257441 None:intergenic
TCATCTGGGTCGTTGTGGTT+TGG 0.400205 2:-16260898 MsG0280007496.01.T01:five_prime_UTR
TCTAGAATCAATGGGGCAAA+AGG 0.402835 2:+16260940 None:intergenic
GGCTCAACCATTTGGTTTCG+AGG 0.417021 2:-16260447 MsG0280007496.01.T01:CDS
TTAGGAGTCAGAACTGTTGC+AGG 0.423318 2:+16257402 None:intergenic
TTGAAGGATTTAAGGATGTC+AGG 0.423670 2:-16260705 MsG0280007496.01.T01:five_prime_UTR
GGATTCGGTGCTAGCTGTTG+TGG 0.425224 2:-16260584 MsG0280007496.01.T01:CDS
TTGTATTTCTCGTAATGCTT+AGG 0.431456 2:+16257384 None:intergenic
AAATCACTATCTCGGTTACT+TGG 0.437572 2:-16257586 MsG0280007496.01.T01:CDS
TCAGCAAATGCTGCAGGACT+GGG 0.449382 2:-16258299 MsG0280007496.01.T01:CDS
GAACCCCACTTCACAAAACC+TGG 0.449997 2:-16261129 MsG0280007496.01.T01:five_prime_UTR
GCCCTATTCTTCCAAAAGAA+AGG 0.455034 2:-16257227 MsG0280007496.01.T01:CDS
TCTTGTTCTTCTTGTTCTTG+TGG 0.457590 2:+16261305 None:intergenic
ATCAAACAAAATTACCATTA+CGG 0.457769 2:+16260413 None:intergenic
TCCTTACACCAATTTAGGGT+TGG 0.458002 2:-16260820 MsG0280007496.01.T01:five_prime_UTR
TCACTCAAGATGATCCTTTG+AGG 0.458314 2:-16257171 None:intergenic
CCCTCATGAAGATCAAGCTC+TGG 0.461208 2:+16257480 None:intergenic
TTATAAATGGAGGGCAAGGA+GGG 0.470720 2:-16260482 MsG0280007496.01.T01:CDS
ACCAACCCTAAATTGGTGTA+AGG 0.482492 2:+16260819 None:intergenic
TAAGCTGCCTAGAACATACA+TGG 0.491541 2:+16257328 None:intergenic
AACAATAAATAAACAACGAT+GGG 0.493927 2:+16260786 None:intergenic
TTCTCTGACAGGTACACTGC+TGG 0.498637 2:-16258327 MsG0280007496.01.T01:intron
ACGGTGGTTTCACCGTGGTC+AGG 0.498848 2:-16257520 MsG0280007496.01.T01:CDS
AGGAATCTATCGCACCGTAA+TGG 0.504905 2:-16260427 MsG0280007496.01.T01:intron
CTCAGCTTAGTAAGTGCAAA+GGG 0.507557 2:+16257288 None:intergenic
TTTAAGGATGTCAGGTGATG+AGG 0.510759 2:-16260697 MsG0280007496.01.T01:five_prime_UTR
CTAACGTTGTTTATAAATGG+AGG 0.516838 2:-16260492 MsG0280007496.01.T01:CDS
TAAATGGAGGGCAAGGAGGG+AGG 0.518145 2:-16260479 MsG0280007496.01.T01:CDS
GATGATTCAGCAAATGCTGC+AGG 0.521797 2:-16258305 MsG0280007496.01.T01:CDS
GCTTGATCTTCATGAGGGTG+AGG 0.522274 2:-16257475 MsG0280007496.01.T01:CDS
ATCAGTGCTGAGTGCATCAA+TGG 0.524900 2:-16257426 MsG0280007496.01.T01:CDS
CAAGGAGGGAGGTTGTTGAC+TGG 0.527134 2:-16260468 MsG0280007496.01.T01:CDS
AACCCCACTTCACAAAACCT+GGG 0.527475 2:-16261128 MsG0280007496.01.T01:five_prime_UTR
CAATTCAAACCAGAAAGTAT+AGG 0.528562 2:+16257249 None:intergenic
GCCATATGACGTTTATGTTG+TGG 0.532324 2:+16261094 None:intergenic
TGTGTATATTATGGCTGAAG+AGG 0.534012 2:-16257610 MsG0280007496.01.T01:CDS
ATAGATTCCTCGAAACCAAA+TGG 0.540101 2:+16260440 None:intergenic
TGAAGTGGGGTTCAAGGCAA+TGG 0.550570 2:+16261139 None:intergenic
GAAGAGGAAAATCACTATCT+CGG 0.555716 2:-16257594 MsG0280007496.01.T01:CDS
TTTATAAATGGAGGGCAAGG+AGG 0.565218 2:-16260483 MsG0280007496.01.T01:CDS
GACTGTCCGAAATTTGAAGA+TGG 0.568426 2:-16257202 MsG0280007496.01.T01:CDS
TGTCCGAAATTTGAAGATGG+TGG 0.572463 2:-16257199 MsG0280007496.01.T01:CDS
TCAAACCAGAAAGTATAGGC+TGG 0.573089 2:+16257253 None:intergenic
GTCCGAAATTTGAAGATGGT+GGG 0.574514 2:-16257198 MsG0280007496.01.T01:CDS
TAACGTTGTTTATAAATGGA+GGG 0.575354 2:-16260491 MsG0280007496.01.T01:CDS
TTGTTTATAAATGGAGGGCA+AGG 0.581384 2:-16260486 MsG0280007496.01.T01:CDS
AAGTGATATGTCAAGAGCGT+GGG 0.585434 2:-16260644 MsG0280007496.01.T01:CDS
CAACAATAAATAAACAACGA+TGG 0.588299 2:+16260785 None:intergenic
CTAGAATCAATGGGGCAAAA+GGG 0.588498 2:+16260941 None:intergenic
TCCAGAGCTTGATCTTCATG+AGG 0.590258 2:-16257481 MsG0280007496.01.T01:CDS
CAATGGATGAGAGAAAAGAG+AGG 0.592007 2:+16261156 None:intergenic
TACATGGATCTCAGATGAAG+AGG 0.592642 2:+16257344 None:intergenic
GAATCAATGGGGCAAAAGGG+TGG 0.604398 2:+16260944 None:intergenic
TAGCTGTTGTGGGGACTGAG+AGG 0.606373 2:-16260573 MsG0280007496.01.T01:CDS
TCTCTTGATACGTTCGCAGA+TGG 0.613005 2:-16258275 MsG0280007496.01.T01:CDS
ACCAAGGAAACAACAAAACA+AGG 0.616011 2:+16261047 None:intergenic
ACCCCACTTCACAAAACCTG+GGG 0.620039 2:-16261127 MsG0280007496.01.T01:five_prime_UTR
GCTCAGCTTAGTAAGTGCAA+AGG 0.620095 2:+16257287 None:intergenic
CAAGTGATATGTCAAGAGCG+TGG 0.624113 2:-16260645 MsG0280007496.01.T01:CDS
ATTCGGTGCTAGCTGTTGTG+GGG 0.629390 2:-16260582 MsG0280007496.01.T01:CDS
CCAGAGCTTGATCTTCATGA+GGG 0.630541 2:-16257480 MsG0280007496.01.T01:CDS
CTCAAGTAAAATGAATCACA+CGG 0.642839 2:+16260619 None:intergenic
AGAGAGAAACTATAGCGTCA+TGG 0.646741 2:+16260979 None:intergenic
TTTACTTGAGACATATGTCG+GGG 0.650312 2:-16260606 MsG0280007496.01.T01:CDS
CTATTCTTCCAAAAGAAAGG+CGG 0.666549 2:-16257224 MsG0280007496.01.T01:CDS
TGGGGACTGAGAGGAGTGTG+AGG 0.667261 2:-16260564 MsG0280007496.01.T01:CDS
ATGTGGCACCATCAAAACCA+AGG 0.693654 2:+16261031 None:intergenic
CATGCTTGACTTCCTGACCA+CGG 0.697314 2:+16257508 None:intergenic
AGAAGTGAAGTCAAACAATG+TGG 0.698720 2:+16261014 None:intergenic
TTACTTGAGACATATGTCGG+GGG 0.716612 2:-16260605 MsG0280007496.01.T01:CDS
TTTGCACTTACTAAGCTGAG+CGG 0.753729 2:-16257285 MsG0280007496.01.T01:CDS
AAAGTACGGTGGTTTCACCG+TGG 0.758266 2:-16257525 MsG0280007496.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAGAAAGAAAAATATT+AGG + Chr2:16259157-16259176 None:intergenic 15.0%
!! AAATTGTACATAAAATGATT+CGG + Chr2:16259944-16259963 None:intergenic 15.0%
!! GAAATATTTCTTCTAATTAT+AGG - Chr2:16260836-16260855 MsG0280007496.01.T01:five_prime_UTR 15.0%
!!! AAGTTTAGCTTAATTTTATA+TGG - Chr2:16259678-16259697 MsG0280007496.01.T01:intron 15.0%
!!! CATTGATTGTAAATAAAAAA+TGG + Chr2:16259074-16259093 None:intergenic 15.0%
!! AAACAGTTTACATACATATA+TGG + Chr2:16260474-16260493 None:intergenic 20.0%
!! AACAATAAATAAACAACGAT+GGG + Chr2:16257696-16257715 None:intergenic 20.0%
!! AAGACAAAAAGAAACAAAAA+AGG - Chr2:16260928-16260947 MsG0280007496.01.T01:five_prime_UTR 20.0%
!! AATAAAAGTCAATGATAACA+AGG + Chr2:16260789-16260808 None:intergenic 20.0%
!! AATCTAGATTCACAATAAAT+CGG + Chr2:16259336-16259355 None:intergenic 20.0%
!! AATGAAAAGAAGAAAATAAC+AGG + Chr2:16259651-16259670 None:intergenic 20.0%
!! AATTGTACATAAAATGATTC+GGG + Chr2:16259943-16259962 None:intergenic 20.0%
!! ACAAAAGTAAAGACAATTAA+AGG - Chr2:16259971-16259990 MsG0280007496.01.T01:intron 20.0%
!! AGACAAAAAGAAACAAAAAA+GGG - Chr2:16260929-16260948 MsG0280007496.01.T01:five_prime_UTR 20.0%
!! AGTAAGCTAAAAATAACTTA+TGG - Chr2:16260672-16260691 MsG0280007496.01.T01:exon 20.0%
!! ATAAAAGTCAATGATAACAA+GGG + Chr2:16260788-16260807 None:intergenic 20.0%
!! ATAAATCAACAAAAGAAAAG+TGG + Chr2:16259432-16259451 None:intergenic 20.0%
!! ATCAAACAAAATTACCATTA+CGG + Chr2:16258069-16258088 None:intergenic 20.0%
!! TCATTCATTTGTGTATATTA+TGG - Chr2:16260860-16260879 MsG0280007496.01.T01:five_prime_UTR 20.0%
!!! AAAAGATTGATTTTTTCATC+TGG - Chr2:16257566-16257585 MsG0280007496.01.T01:CDS 20.0%
!!! AAAGATTGATTTTTTCATCT+GGG - Chr2:16257567-16257586 MsG0280007496.01.T01:CDS 20.0%
!!! GTTATTTTCTTCTTTTCATT+TGG - Chr2:16259651-16259670 MsG0280007496.01.T01:intron 20.0%
!!! TTGTTATCATTGACTTTTAT+TGG - Chr2:16260788-16260807 MsG0280007496.01.T01:five_prime_UTR 20.0%
!!! TTTAAAACCATGATGTAATT+AGG - Chr2:16258555-16258574 MsG0280007496.01.T01:intron 20.0%
!!! TTTGAGTTTTAGGATTTTTT+GGG - Chr2:16257619-16257638 MsG0280007496.01.T01:CDS 20.0%
! AAACAACAAAACAAGGATTA+AGG + Chr2:16257428-16257447 None:intergenic 25.0%
! AAGATTGGACTATTATTCTT+TGG + Chr2:16258696-16258715 None:intergenic 25.0%
! AAGTAAAGACAATTAAAGGA+AGG - Chr2:16259975-16259994 MsG0280007496.01.T01:intron 25.0%
! AGATTGGACTATTATTCTTT+GGG + Chr2:16258695-16258714 None:intergenic 25.0%
! ATATCTGAACTTTGAATGTT+CGG + Chr2:16260377-16260396 None:intergenic 25.0%
! ATTATTTGCCAATTGATCAA+AGG + Chr2:16259726-16259745 None:intergenic 25.0%
! ATTTGTATGAGTTATTGTTG+TGG - Chr2:16258126-16258145 MsG0280007496.01.T01:intron 25.0%
! CAACAATAAATAAACAACGA+TGG + Chr2:16257697-16257716 None:intergenic 25.0%
! CATGTCATATAAAGATACAA+AGG + Chr2:16260309-16260328 None:intergenic 25.0%
! CTACTAACGTTGTTTATAAA+TGG - Chr2:16257984-16258003 MsG0280007496.01.T01:intron 25.0%
! GTTCTATCATAAACCATATT+TGG + Chr2:16259773-16259792 None:intergenic 25.0%
! TAACGTTGTTTATAAATGGA+GGG - Chr2:16257988-16258007 MsG0280007496.01.T01:intron 25.0%
! TAATCCATCAAAAATTGTTG+AGG + Chr2:16257959-16257978 None:intergenic 25.0%
! TACAATCAATGCATTAAACA+TGG - Chr2:16259083-16259102 MsG0280007496.01.T01:intron 25.0%
! TAGAAAATTGTGAACAAATG+AGG - Chr2:16258447-16258466 MsG0280007496.01.T01:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG - Chr2:16259777-16259796 MsG0280007496.01.T01:intron 25.0%
! TTCAAAGTTCAGATATTGTA+TGG - Chr2:16260381-16260400 MsG0280007496.01.T01:intron 25.0%
! TTCATGATCACTTATATTGT+TGG - Chr2:16258370-16258389 MsG0280007496.01.T01:intron 25.0%
! TTTATTGGATGAATGGTTAT+TGG - Chr2:16258173-16258192 MsG0280007496.01.T01:intron 25.0%
!! AGTAAATAGTTTGTATGACT+TGG + Chr2:16258664-16258683 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + Chr2:16260539-16260558 None:intergenic 25.0%
!! ATTTTACTTGAGACATATGT+CGG - Chr2:16257871-16257890 MsG0280007496.01.T01:intron 25.0%
!! TATATTGTTGGTTAATGCAA+AGG - Chr2:16258382-16258401 MsG0280007496.01.T01:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + Chr2:16260538-16260557 None:intergenic 25.0%
!! TTCTCAATGTAATGTGTTTT+CGG + Chr2:16258823-16258842 None:intergenic 25.0%
!!! AATGTAGTCACTGTTTTTTA+TGG - Chr2:16259388-16259407 MsG0280007496.01.T01:intron 25.0%
!!! AGATGGATTTTAATAGTCAT+TGG + Chr2:16260275-16260294 None:intergenic 25.0%
!!! ATGTTTATCGATTTTGGATA+TGG - Chr2:16259296-16259315 MsG0280007496.01.T01:intron 25.0%
!!! CAACAATTTTTGATGGATTA+TGG - Chr2:16257959-16257978 MsG0280007496.01.T01:intron 25.0%
!!! GAATTGTTTTATTGGATGAA+TGG - Chr2:16258166-16258185 MsG0280007496.01.T01:intron 25.0%
!!! GTTTGAGTTTTAGGATTTTT+TGG - Chr2:16257618-16257637 MsG0280007496.01.T01:CDS 25.0%
!!! TATGTGGTGAATTGTTTTAT+TGG - Chr2:16258158-16258177 MsG0280007496.01.T01:intron 25.0%
!!! TTTTTCAGTCTAGAATCAAT+GGG + Chr2:16257550-16257569 None:intergenic 25.0%
!!! TTTTTTACTACTACCATACA+TGG + Chr2:16259543-16259562 None:intergenic 25.0%
AAAAGGAGGTTTGAAGAAAA+TGG + Chr2:16257290-16257309 None:intergenic 30.0%
AAACCTCAAAAAGACAACAA+CGG + Chr2:16257208-16257227 None:intergenic 30.0%
AAACTTGACCAAATTCTTGT+AGG + Chr2:16258326-16258345 None:intergenic 30.0%
AACAAAAAAGGGTGAAAGTA+CGG - Chr2:16260940-16260959 MsG0280007496.01.T01:five_prime_UTR 30.0%
AACTTGACCAAATTCTTGTA+GGG + Chr2:16258325-16258344 None:intergenic 30.0%
AATCAATGCATTAAACATGG+TGG - Chr2:16259086-16259105 MsG0280007496.01.T01:intron 30.0%
AGGTAATAACTAGAGAACTA+GGG - Chr2:16258585-16258604 MsG0280007496.01.T01:intron 30.0%
ATCAATGCATTAAACATGGT+GGG - Chr2:16259087-16259106 MsG0280007496.01.T01:intron 30.0%
CAATACCTTAATTGTCTTCA+TGG + Chr2:16259892-16259911 None:intergenic 30.0%
CAATCTTCCTAATTACATCA+TGG + Chr2:16258565-16258584 None:intergenic 30.0%
CAGAAAAATACCTGATAAAC+TGG - Chr2:16260242-16260261 MsG0280007496.01.T01:intron 30.0%
CTAACGTTGTTTATAAATGG+AGG - Chr2:16257987-16258006 MsG0280007496.01.T01:intron 30.0%
CTCAAGTAAAATGAATCACA+CGG + Chr2:16257863-16257882 None:intergenic 30.0%
TGATGTAATTAGGAAGATTG+AGG - Chr2:16258565-16258584 MsG0280007496.01.T01:intron 30.0%
TTGTATTTCTCGTAATGCTT+AGG + Chr2:16261098-16261117 None:intergenic 30.0%
TTGTGAATCTAGATTCACTA+TGG - Chr2:16259341-16259360 MsG0280007496.01.T01:intron 30.0%
! AAAATAGCCTCTCCTTTTAA+TGG - Chr2:16259559-16259578 MsG0280007496.01.T01:intron 30.0%
! AAATAGCCTCTCCTTTTAAT+GGG - Chr2:16259560-16259579 MsG0280007496.01.T01:intron 30.0%
! AAGCACTTGTTAGATTGTTT+GGG + Chr2:16260726-16260745 None:intergenic 30.0%
! AATGTAATGTGTTTTCGGAA+TGG + Chr2:16258818-16258837 None:intergenic 30.0%
! ACAGTGACTACATTAAGTTT+TGG + Chr2:16259382-16259401 None:intergenic 30.0%
! AGAAAAGAGAGGATTTTGAA+GGG + Chr2:16257315-16257334 None:intergenic 30.0%
! CAATTCAAACCAGAAAGTAT+AGG + Chr2:16261233-16261252 None:intergenic 30.0%
! GATATTTTCATAAGCTATCC+TGG - Chr2:16260637-16260656 MsG0280007496.01.T01:CDS 30.0%
! GTTTTCCTTACACCAATTTA+GGG - Chr2:16257655-16257674 MsG0280007496.01.T01:intron 30.0%
! TAAGCACTTGTTAGATTGTT+TGG + Chr2:16260727-16260746 None:intergenic 30.0%
! TGTTCCTCAACAATTTTTGA+TGG - Chr2:16257952-16257971 MsG0280007496.01.T01:intron 30.0%
! TTTTACTTGAGACATATGTC+GGG - Chr2:16257872-16257891 MsG0280007496.01.T01:intron 30.0%
!! AAGGTATTGAGTTGAATACT+TGG - Chr2:16259903-16259922 MsG0280007496.01.T01:intron 30.0%
!! ACATTAAGTTTTGGCAATGT+CGG + Chr2:16259373-16259392 None:intergenic 30.0%
!! ATCGATTTGATAACCATGTA+TGG - Chr2:16259527-16259546 MsG0280007496.01.T01:intron 30.0%
!! ATGGCTAGAAAATTTTGACA+GGG - Chr2:16259697-16259716 MsG0280007496.01.T01:intron 30.0%
!! CCTTTTTGAGAGTGAAAAAA+GGG + Chr2:16257260-16257279 None:intergenic 30.0%
!! TATGGCTAGAAAATTTTGAC+AGG - Chr2:16259696-16259715 MsG0280007496.01.T01:intron 30.0%
!! TCATCAATGGTTTGAGTTTT+AGG - Chr2:16257609-16257628 MsG0280007496.01.T01:CDS 30.0%
!! TTTTCAGTCTAGAATCAATG+GGG + Chr2:16257549-16257568 None:intergenic 30.0%
!!! ATGAATGGTTATTGGCTTTT+GGG - Chr2:16258181-16258200 MsG0280007496.01.T01:intron 30.0%
!!! CCTTTTTTCACTCTCAAAAA+GGG - Chr2:16257258-16257277 MsG0280007496.01.T01:CDS 30.0%
!!! CTTTTTCAGTCTAGAATCAA+TGG + Chr2:16257551-16257570 None:intergenic 30.0%
!!! TCTCGAATGTTTATCGATTT+TGG - Chr2:16259290-16259309 MsG0280007496.01.T01:intron 30.0%
!!! TGGTTTGGTTTTTTCATCAA+TGG - Chr2:16257596-16257615 MsG0280007496.01.T01:CDS 30.0%
AAATCACTATCTCGGTTACT+TGG - Chr2:16260893-16260912 MsG0280007496.01.T01:five_prime_UTR 35.0%
AAGGTTATCAATTGTGACTG+TGG - Chr2:16258401-16258420 MsG0280007496.01.T01:intron 35.0%
ACCAAGGAAACAACAAAACA+AGG + Chr2:16257435-16257454 None:intergenic 35.0%
ACCCATTTATTCTCTTGTCA+CGG - Chr2:16260100-16260119 MsG0280007496.01.T01:intron 35.0%
AGAAGTGAAGTCAAACAATG+TGG + Chr2:16257468-16257487 None:intergenic 35.0%
AGTTCAGATATTGTATGGTC+AGG - Chr2:16260386-16260405 MsG0280007496.01.T01:intron 35.0%
ATAGATTCCTCGAAACCAAA+TGG + Chr2:16258042-16258061 None:intergenic 35.0%
ATCAACAAAAGAAAAGTGGC+TGG + Chr2:16259428-16259447 None:intergenic 35.0%
ATCTGCAATGCAGAAAACAT+AGG + Chr2:16260346-16260365 None:intergenic 35.0%
ATGGATCAAAACTCGAAACT+CGG + Chr2:16259188-16259207 None:intergenic 35.0%
CAGATTGTGATTTCTGTGAT+CGG - Chr2:16259007-16259026 MsG0280007496.01.T01:intron 35.0%
CTATTCTTCCAAAAGAAAGG+CGG - Chr2:16261255-16261274 MsG0280007496.01.T01:five_prime_UTR 35.0%
GAAATCTGTTGTAATCCTTG+AGG - Chr2:16258918-16258937 MsG0280007496.01.T01:intron 35.0%
GAAGAGGAAAATCACTATCT+CGG - Chr2:16260885-16260904 MsG0280007496.01.T01:five_prime_UTR 35.0%
GAGGTAATAACTAGAGAACT+AGG - Chr2:16258584-16258603 MsG0280007496.01.T01:intron 35.0%
TAACAAGAACACATGAGCTT+AGG + Chr2:16258243-16258262 None:intergenic 35.0%
TCCACAACATAAACGTCATA+TGG - Chr2:16257384-16257403 MsG0280007496.01.T01:CDS 35.0%
TCCGTGACAAGAGAATAAAT+GGG + Chr2:16260104-16260123 None:intergenic 35.0%
TCTTGTTCTTCTTGTTCTTG+TGG + Chr2:16257177-16257196 None:intergenic 35.0%
TGAAGCTATGTGTCCAAATA+TGG - Chr2:16259757-16259776 MsG0280007496.01.T01:intron 35.0%
TGTGTATATTATGGCTGAAG+AGG - Chr2:16260869-16260888 MsG0280007496.01.T01:five_prime_UTR 35.0%
TGTTCTTGTTAGATGCTACA+TGG - Chr2:16258252-16258271 MsG0280007496.01.T01:CDS 35.0%
TTCCCACCATCTTCAAATTT+CGG + Chr2:16261286-16261305 None:intergenic 35.0%
TTCCGTGACAAGAGAATAAA+TGG + Chr2:16260105-16260124 None:intergenic 35.0%
TTCCTAAACCAACCCTAAAT+TGG + Chr2:16257670-16257689 None:intergenic 35.0%
TTGAAGGATTTAAGGATGTC+AGG - Chr2:16257774-16257793 MsG0280007496.01.T01:intron 35.0%
TTGTTTATAAATGGAGGGCA+AGG - Chr2:16257993-16258012 MsG0280007496.01.T01:intron 35.0%
TTTACTTGAGACATATGTCG+GGG - Chr2:16257873-16257892 MsG0280007496.01.T01:intron 35.0%
TTTCATCACACCTAATGTTC+AGG - Chr2:16261028-16261047 MsG0280007496.01.T01:five_prime_UTR 35.0%
! AACTAGAGAACTAGGGTTTT+AGG - Chr2:16258592-16258611 MsG0280007496.01.T01:intron 35.0%
! AATAGCCTCTCCTTTTAATG+GGG - Chr2:16259561-16259580 MsG0280007496.01.T01:intron 35.0%
! ACTAGAGAACTAGGGTTTTA+GGG - Chr2:16258593-16258612 MsG0280007496.01.T01:intron 35.0%
! AGTTATTTCCACGCATTGTT+GGG - Chr2:16260512-16260531 MsG0280007496.01.T01:CDS 35.0%
! ATAAGAAGAAGTGCAATGTG+TGG + Chr2:16258296-16258315 None:intergenic 35.0%
! ATTCGAGATTTGTATCGATC+GGG + Chr2:16259278-16259297 None:intergenic 35.0%
! CATTCGAGATTTGTATCGAT+CGG + Chr2:16259279-16259298 None:intergenic 35.0%
! GAGAAAAGAGAGGATTTTGA+AGG + Chr2:16257316-16257335 None:intergenic 35.0%
! GAGAATAAATGGGTTCAAAG+TGG + Chr2:16260094-16260113 None:intergenic 35.0%
! GGTTTTCCTTACACCAATTT+AGG - Chr2:16257654-16257673 MsG0280007496.01.T01:intron 35.0%
! TAGCTGACATGGTTTAAGAT+TGG + Chr2:16258711-16258730 None:intergenic 35.0%
! TGACTTTTATTGGCATACAG+AGG - Chr2:16260798-16260817 MsG0280007496.01.T01:five_prime_UTR 35.0%
! TGGTTCTATACCAGTTTATC+AGG + Chr2:16260255-16260274 None:intergenic 35.0%
! TTTGGGAATTTTTGTCACGA+AGG - Chr2:16258198-16258217 MsG0280007496.01.T01:intron 35.0%
!! CCCTTTTTGAGAGTGAAAAA+AGG + Chr2:16257261-16257280 None:intergenic 35.0%
!! GCCTTTCTTTTGGAAGAATA+GGG + Chr2:16261256-16261275 None:intergenic 35.0%
!! GGTGGATTTTGAAGGATTTA+AGG - Chr2:16257766-16257785 MsG0280007496.01.T01:intron 35.0%
!!! AGTTTCGAGTTTTGATCCAT+CGG - Chr2:16259188-16259207 MsG0280007496.01.T01:intron 35.0%
!!! CCCTTTTTTCACTCTCAAAA+AGG - Chr2:16257257-16257276 MsG0280007496.01.T01:CDS 35.0%
!!! GATGAATGGTTATTGGCTTT+TGG - Chr2:16258180-16258199 MsG0280007496.01.T01:intron 35.0%
!!! TACTTCATGCTAGTTTTCTG+TGG - Chr2:16260017-16260036 MsG0280007496.01.T01:intron 35.0%
!!! TCCTTGTTTTGTTGTTTCCT+TGG - Chr2:16257431-16257450 MsG0280007496.01.T01:CDS 35.0%
!!! TGATGCTGTTTTTGTGTCAT+GGG - Chr2:16257806-16257825 MsG0280007496.01.T01:intron 35.0%
!!! TGTTGTTTCCTTGGTTTTGA+TGG - Chr2:16257440-16257459 MsG0280007496.01.T01:CDS 35.0%
!!! TTGATGCTGTTTTTGTGTCA+TGG - Chr2:16257805-16257824 MsG0280007496.01.T01:intron 35.0%
AAATCACAATCTGGCAGCTA+CGG + Chr2:16259000-16259019 None:intergenic 40.0%
AACAGGTGACCATTGTTATG+AGG + Chr2:16259634-16259653 None:intergenic 40.0%
AATGATAACAAGGGTCTGTG+TGG + Chr2:16260779-16260798 None:intergenic 40.0%
ACAGGTGACCATTGTTATGA+GGG + Chr2:16259633-16259652 None:intergenic 40.0%
ACCAACCCTAAATTGGTGTA+AGG + Chr2:16257663-16257682 None:intergenic 40.0%
ACGGCAAAAATGGAATGCAA+CGG + Chr2:16260043-16260062 None:intergenic 40.0%
AGAGAGAAACTATAGCGTCA+TGG + Chr2:16257503-16257522 None:intergenic 40.0%
AGATTGTTTGGGAGAGCTTA+TGG + Chr2:16260715-16260734 None:intergenic 40.0%
AGCAAAAGACACGGCAAAAA+TGG + Chr2:16260053-16260072 None:intergenic 40.0%
AGTAACCAGCCTATACTTTC+TGG - Chr2:16261221-16261240 MsG0280007496.01.T01:five_prime_UTR 40.0%
CAAAGGAAACTAACGACAGA+TGG + Chr2:16260292-16260311 None:intergenic 40.0%
CAAGTCTGTTGCTGTGATAA+AGG - Chr2:16258874-16258893 MsG0280007496.01.T01:intron 40.0%
CAATGCAGAAAACATAGGCA+TGG + Chr2:16260341-16260360 None:intergenic 40.0%
CAATGGATGAGAGAAAAGAG+AGG + Chr2:16257326-16257345 None:intergenic 40.0%
CAATTTGATCCCCAGTTAGT+GGG - Chr2:16259802-16259821 MsG0280007496.01.T01:intron 40.0%
CCATGTTGTAGCAAAAGACA+CGG + Chr2:16260062-16260081 None:intergenic 40.0%
CGATCACAGAAATCACAATC+TGG + Chr2:16259009-16259028 None:intergenic 40.0%
CGTGACACAATACACTCTAT+CGG - Chr2:16258757-16258776 MsG0280007496.01.T01:intron 40.0%
CTAGAATCAATGGGGCAAAA+GGG + Chr2:16257541-16257560 None:intergenic 40.0%
CTCAGCTTAGTAAGTGCAAA+GGG + Chr2:16261194-16261213 None:intergenic 40.0%
CTGAGATCCATGTATGTTCT+AGG - Chr2:16261144-16261163 MsG0280007496.01.T01:five_prime_UTR 40.0%
CTTACTTTCATAAGCTCTCC+AGG + Chr2:16260658-16260677 None:intergenic 40.0%
CTTCAGCTGTTTAGCACAAA+AGG + Chr2:16260420-16260439 None:intergenic 40.0%
GACTGTCCGAAATTTGAAGA+TGG - Chr2:16261277-16261296 MsG0280007496.01.T01:five_prime_UTR 40.0%
GCCATATGACGTTTATGTTG+TGG + Chr2:16257388-16257407 None:intergenic 40.0%
GCCCTATTCTTCCAAAAGAA+AGG - Chr2:16261252-16261271 MsG0280007496.01.T01:five_prime_UTR 40.0%
GGACTATTATTCTTTGGGCT+GGG + Chr2:16258690-16258709 None:intergenic 40.0%
GTACCTGTCAGAGAAAATTG+AGG + Chr2:16260147-16260166 None:intergenic 40.0%
GTCCGAAATTTGAAGATGGT+GGG - Chr2:16261281-16261300 MsG0280007496.01.T01:five_prime_UTR 40.0%
GTGACACAATACACTCTATC+GGG - Chr2:16258758-16258777 MsG0280007496.01.T01:intron 40.0%
TAAGCTGCCTAGAACATACA+TGG + Chr2:16261154-16261173 None:intergenic 40.0%
TACATGGATCTCAGATGAAG+AGG + Chr2:16261138-16261157 None:intergenic 40.0%
TGACCTCAAAAGTCTTTACG+TGG - Chr2:16258505-16258524 MsG0280007496.01.T01:intron 40.0%
TGAGTCACCCTACAAGAATT+TGG - Chr2:16258315-16258334 MsG0280007496.01.T01:CDS 40.0%
TGATAAAGGATACGAGTGAG+TGG - Chr2:16258888-16258907 MsG0280007496.01.T01:intron 40.0%
TGCGTCCATGAAGACAATTA+AGG - Chr2:16259884-16259903 MsG0280007496.01.T01:intron 40.0%
TGGACTATTATTCTTTGGGC+TGG + Chr2:16258691-16258710 None:intergenic 40.0%
TGGATCAAAACTCGAAACTC+GGG + Chr2:16259187-16259206 None:intergenic 40.0%
TGTCCGAAATTTGAAGATGG+TGG - Chr2:16261280-16261299 MsG0280007496.01.T01:five_prime_UTR 40.0%
TTACTTGAGACATATGTCGG+GGG - Chr2:16257874-16257893 MsG0280007496.01.T01:intron 40.0%
TTATAAATGGAGGGCAAGGA+GGG - Chr2:16257997-16258016 MsG0280007496.01.T01:intron 40.0%
TTGTAATCCTTGAGGCTTGA+TGG - Chr2:16258926-16258945 MsG0280007496.01.T01:intron 40.0%
TTGTGGAAAAACAAAACCCC+AGG + Chr2:16257371-16257390 None:intergenic 40.0%
TTTAAGGATGTCAGGTGATG+AGG - Chr2:16257782-16257801 MsG0280007496.01.T01:intron 40.0%
TTTATAAATGGAGGGCAAGG+AGG - Chr2:16257996-16258015 MsG0280007496.01.T01:intron 40.0%
TTTGCACTTACTAAGCTGAG+CGG - Chr2:16261194-16261213 MsG0280007496.01.T01:five_prime_UTR 40.0%
! AAAAAAGGGTGAAAGTACGG+TGG - Chr2:16260943-16260962 MsG0280007496.01.T01:five_prime_UTR 40.0%
! AAGTGATATGTCAAGAGCGT+GGG - Chr2:16257835-16257854 MsG0280007496.01.T01:intron 40.0%
! ACACCGTTGTTGTCTTTTTG+AGG - Chr2:16257202-16257221 MsG0280007496.01.T01:CDS 40.0%
! CAACCTCAATTTTCTCTGAC+AGG - Chr2:16260141-16260160 MsG0280007496.01.T01:intron 40.0%
! CAGGGTATCCTTTGATCAAT+TGG - Chr2:16259715-16259734 MsG0280007496.01.T01:intron 40.0%
! CAGTTATTTCCACGCATTGT+TGG - Chr2:16260511-16260530 MsG0280007496.01.T01:CDS 40.0%
! CTTTCATTGACTAGCTGACA+TGG + Chr2:16258722-16258741 None:intergenic 40.0%
! GGCTTGATGGATAAGGAAAT+TGG - Chr2:16258939-16258958 MsG0280007496.01.T01:intron 40.0%
! TCAAACCAGAAAGTATAGGC+TGG + Chr2:16261229-16261248 None:intergenic 40.0%
! TCCTTACACCAATTTAGGGT+TGG - Chr2:16257659-16257678 MsG0280007496.01.T01:intron 40.0%
! TCTAGAATCAATGGGGCAAA+AGG + Chr2:16257542-16257561 None:intergenic 40.0%
!! CACCAATTTAGGGTTGGTTT+AGG - Chr2:16257665-16257684 MsG0280007496.01.T01:intron 40.0%
!! CGCCTTTCTTTTGGAAGAAT+AGG + Chr2:16261257-16261276 None:intergenic 40.0%
!! CTTTAAAATGACGCGTCAGT+GGG + Chr2:16258795-16258814 None:intergenic 40.0%
!! GAGGATTTTGAAGGGTGAAA+AGG + Chr2:16257307-16257326 None:intergenic 40.0%
!! GATTTTGAAGGGTGAAAAGG+AGG + Chr2:16257304-16257323 None:intergenic 40.0%
!!! ATTTTTTGGGCTAGCTCGAT+AGG - Chr2:16257632-16257651 MsG0280007496.01.T01:intron 40.0%
!!! TTTTTTCATCTGGGTCGTTG+TGG - Chr2:16257576-16257595 MsG0280007496.01.T01:CDS 40.0%
!!! TTTTTTGGGCTAGCTCGATA+GGG - Chr2:16257633-16257652 MsG0280007496.01.T01:intron 40.0%
AAAGGATACGAGTGAGTGGT+GGG - Chr2:16258892-16258911 MsG0280007496.01.T01:intron 45.0%
AACCCCACTTCACAAAACCT+GGG - Chr2:16257351-16257370 MsG0280007496.01.T01:CDS 45.0%
ACTCAGGGTTTGACAGGAAA+GGG - Chr2:16260444-16260463 MsG0280007496.01.T01:CDS 45.0%
AGGAATCTATCGCACCGTAA+TGG - Chr2:16258052-16258071 MsG0280007496.01.T01:intron 45.0%
ATCGGTAAGGTTGCTGCATT+GGG - Chr2:16259206-16259225 MsG0280007496.01.T01:intron 45.0%
ATGTGGCACCATCAAAACCA+AGG + Chr2:16257451-16257470 None:intergenic 45.0%
CAAGTGATATGTCAAGAGCG+TGG - Chr2:16257834-16257853 MsG0280007496.01.T01:intron 45.0%
CCAGAGCTTGATCTTCATGA+GGG - Chr2:16260999-16261018 MsG0280007496.01.T01:five_prime_UTR 45.0%
CCTCAAAAGTCTTTACGTGG+TGG - Chr2:16258508-16258527 MsG0280007496.01.T01:intron 45.0%
GATGATTCAGCAAATGCTGC+AGG - Chr2:16260174-16260193 MsG0280007496.01.T01:intron 45.0%
GCAATTTGATCCCCAGTTAG+TGG - Chr2:16259801-16259820 MsG0280007496.01.T01:intron 45.0%
GCTCAGCTTAGTAAGTGCAA+AGG + Chr2:16261195-16261214 None:intergenic 45.0%
GTTGTGGTTGCAAGTGTATG+TGG - Chr2:16258142-16258161 MsG0280007496.01.T01:intron 45.0%
TAAAGGATACGAGTGAGTGG+TGG - Chr2:16258891-16258910 MsG0280007496.01.T01:intron 45.0%
TACTCAGGGTTTGACAGGAA+AGG - Chr2:16260443-16260462 MsG0280007496.01.T01:CDS 45.0%
TCCAGAGCTTGATCTTCATG+AGG - Chr2:16260998-16261017 MsG0280007496.01.T01:five_prime_UTR 45.0%
TCCTTATCCATCAAGCCTCA+AGG + Chr2:16258936-16258955 None:intergenic 45.0%
TCTCTTGATACGTTCGCAGA+TGG - Chr2:16260204-16260223 MsG0280007496.01.T01:intron 45.0%
TGATACATTTCAGCTCCACG+TGG + Chr2:16258627-16258646 None:intergenic 45.0%
TTAGGAGTCAGAACTGTTGC+AGG + Chr2:16261080-16261099 None:intergenic 45.0%
! AAACAGCTGAAGCACTACTC+AGG - Chr2:16260428-16260447 MsG0280007496.01.T01:CDS 45.0%
! AACAGCTGAAGCACTACTCA+GGG - Chr2:16260429-16260448 MsG0280007496.01.T01:CDS 45.0%
! ATCAGTGCTGAGTGCATCAA+TGG - Chr2:16261053-16261072 MsG0280007496.01.T01:five_prime_UTR 45.0%
! CCACCACGTAAAGACTTTTG+AGG + Chr2:16258511-16258530 None:intergenic 45.0%
! CCGTGTCTTTTGCTACAACA+TGG - Chr2:16260059-16260078 MsG0280007496.01.T01:intron 45.0%
! GCACTGATCACCTGAACATT+AGG + Chr2:16261041-16261060 None:intergenic 45.0%
! GTTTTGTGAAGTGGGGTTCA+AGG + Chr2:16257349-16257368 None:intergenic 45.0%
! TCCTTGAGGCTTGATGGATA+AGG - Chr2:16258932-16258951 MsG0280007496.01.T01:intron 45.0%
! TGACAGTGTTGAAGAAGCAC+AGG + Chr2:16258856-16258875 None:intergenic 45.0%
! TGTTGACTGGCTCAACCATT+TGG - Chr2:16258024-16258043 MsG0280007496.01.T01:intron 45.0%
!! AAACCCCAGGTTTTGTGAAG+TGG + Chr2:16257358-16257377 None:intergenic 45.0%
!! AACCCCAGGTTTTGTGAAGT+GGG + Chr2:16257357-16257376 None:intergenic 45.0%
!! CGAGTTTTGATCCATCGGTA+AGG - Chr2:16259193-16259212 MsG0280007496.01.T01:intron 45.0%
!! GCTTTAAAATGACGCGTCAG+TGG + Chr2:16258796-16258815 None:intergenic 45.0%
!!! GTAGAGTGTTGCTTTTGCTG+TGG - Chr2:16257736-16257755 MsG0280007496.01.T01:intron 45.0%
!!! TGCTGTTTTTGTGTCATGGG+AGG - Chr2:16257809-16257828 MsG0280007496.01.T01:intron 45.0%
AAAGTACGGTGGTTTCACCG+TGG - Chr2:16260954-16260973 MsG0280007496.01.T01:five_prime_UTR 50.0%
AAGGATACGAGTGAGTGGTG+GGG - Chr2:16258893-16258912 MsG0280007496.01.T01:intron 50.0%
ACCCCACTTCACAAAACCTG+GGG - Chr2:16257352-16257371 MsG0280007496.01.T01:CDS 50.0%
ACTCTCCTCGATCCCTATAC+CGG - Chr2:16259602-16259621 MsG0280007496.01.T01:intron 50.0%
AGCACTACTCAGGGTTTGAC+AGG - Chr2:16260438-16260457 MsG0280007496.01.T01:CDS 50.0%
CAATGCAGCAACCTTACCGA+TGG + Chr2:16259207-16259226 None:intergenic 50.0%
CAATTGCGACTGCAATGCAG+TGG - Chr2:16258482-16258501 MsG0280007496.01.T01:intron 50.0%
CATCGGTAAGGTTGCTGCAT+TGG - Chr2:16259205-16259224 MsG0280007496.01.T01:intron 50.0%
CATGCTTGACTTCCTGACCA+CGG + Chr2:16260974-16260993 None:intergenic 50.0%
CATTGTTATGAGGGCTCCAC+CGG + Chr2:16259624-16259643 None:intergenic 50.0%
CCCTCATGAAGATCAAGCTC+TGG + Chr2:16261002-16261021 None:intergenic 50.0%
CTGGCAGCTACGGAAAGATT+AGG + Chr2:16258990-16259009 None:intergenic 50.0%
GAACCCCACTTCACAAAACC+TGG - Chr2:16257350-16257369 MsG0280007496.01.T01:CDS 50.0%
GAATCAATGGGGCAAAAGGG+TGG + Chr2:16257538-16257557 None:intergenic 50.0%
GAGACATATGTCGGGGGATT+CGG - Chr2:16257880-16257899 MsG0280007496.01.T01:intron 50.0%
GCTTGATCTTCATGAGGGTG+AGG - Chr2:16261004-16261023 MsG0280007496.01.T01:five_prime_UTR 50.0%
TCAGCAAATGCTGCAGGACT+GGG - Chr2:16260180-16260199 MsG0280007496.01.T01:intron 50.0%
TCATCTGGGTCGTTGTGGTT+TGG - Chr2:16257581-16257600 MsG0280007496.01.T01:CDS 50.0%
TGAAGTGGGGTTCAAGGCAA+TGG + Chr2:16257343-16257362 None:intergenic 50.0%
TGCAACCCTGCCCCATTAAA+AGG + Chr2:16259574-16259593 None:intergenic 50.0%
TTACGTGGTGGTTGCAGTTG+TGG - Chr2:16258520-16258539 MsG0280007496.01.T01:intron 50.0%
TTCAGCAAATGCTGCAGGAC+TGG - Chr2:16260179-16260198 MsG0280007496.01.T01:intron 50.0%
TTCTCTGACAGGTACACTGC+TGG - Chr2:16260152-16260171 MsG0280007496.01.T01:intron 50.0%
! CCTCTCCTTTTAATGGGGCA+GGG - Chr2:16259566-16259585 MsG0280007496.01.T01:intron 50.0%
! GGCTCAACCATTTGGTTTCG+AGG - Chr2:16258032-16258051 MsG0280007496.01.T01:intron 50.0%
! TTTAGGGTTGAGCAACCACG+TGG - Chr2:16258609-16258628 MsG0280007496.01.T01:intron 50.0%
!! ACCCCAGGTTTTGTGAAGTG+GGG + Chr2:16257356-16257375 None:intergenic 50.0%
!! ATTCGGTGCTAGCTGTTGTG+GGG - Chr2:16257897-16257916 MsG0280007496.01.T01:intron 50.0%
!! GATTCGGTGCTAGCTGTTGT+GGG - Chr2:16257896-16257915 MsG0280007496.01.T01:intron 50.0%
!!! GAGTGTTGCTTTTGCTGTGG+TGG - Chr2:16257739-16257758 MsG0280007496.01.T01:intron 50.0%
!!! TGTTGCTTTTGCTGTGGTGG+CGG - Chr2:16257742-16257761 MsG0280007496.01.T01:intron 50.0%
AAACAGGGCCCAACAATGCG+TGG + Chr2:16260523-16260542 None:intergenic 55.0%
ACGCATTGTTGGGCCCTGTT+TGG - Chr2:16260522-16260541 MsG0280007496.01.T01:CDS 55.0%
AGGATACGAGTGAGTGGTGG+GGG - Chr2:16258894-16258913 MsG0280007496.01.T01:intron 55.0%
ATGAGGGCTCCACCGGTATA+GGG + Chr2:16259617-16259636 None:intergenic 55.0%
CAAGGAGGGAGGTTGTTGAC+TGG - Chr2:16258011-16258030 MsG0280007496.01.T01:intron 55.0%
CAGCCTCATCCCACTAACTG+GGG + Chr2:16259814-16259833 None:intergenic 55.0%
CCAGCCTCATCCCACTAACT+GGG + Chr2:16259815-16259834 None:intergenic 55.0%
CCCTGCCCCATTAAAAGGAG+AGG + Chr2:16259569-16259588 None:intergenic 55.0%
CGGTGGAGCCCTCATAACAA+TGG - Chr2:16259622-16259641 MsG0280007496.01.T01:intron 55.0%
GATCCCCAGTTAGTGGGATG+AGG - Chr2:16259808-16259827 MsG0280007496.01.T01:intron 55.0%
TAAATGGAGGGCAAGGAGGG+AGG - Chr2:16258000-16258019 MsG0280007496.01.T01:intron 55.0%
TAGCTGTTGTGGGGACTGAG+AGG - Chr2:16257906-16257925 MsG0280007496.01.T01:intron 55.0%
TATGAGGGCTCCACCGGTAT+AGG + Chr2:16259618-16259637 None:intergenic 55.0%
! CGGACAGTCCGCCTTTCTTT+TGG + Chr2:16261266-16261285 None:intergenic 55.0%
! GCCTCTCCTTTTAATGGGGC+AGG - Chr2:16259565-16259584 MsG0280007496.01.T01:intron 55.0%
!! GGATTCGGTGCTAGCTGTTG+TGG - Chr2:16257895-16257914 MsG0280007496.01.T01:intron 55.0%
!!! GTGGCGGTGGTGGATTTTGA+AGG - Chr2:16257758-16257777 MsG0280007496.01.T01:intron 55.0%
ACGGTGGTTTCACCGTGGTC+AGG - Chr2:16260959-16260978 MsG0280007496.01.T01:five_prime_UTR 60.0%
CCCAGTTAGTGGGATGAGGC+TGG - Chr2:16259812-16259831 MsG0280007496.01.T01:intron 60.0%
CTCCACCGGTATAGGGATCG+AGG + Chr2:16259610-16259629 None:intergenic 60.0%
CTCCTCGATCCCTATACCGG+TGG - Chr2:16259605-16259624 MsG0280007496.01.T01:intron 60.0%
GCCAGCCTCATCCCACTAAC+TGG + Chr2:16259816-16259835 None:intergenic 60.0%
! TGGGGACTGAGAGGAGTGTG+AGG - Chr2:16257915-16257934 MsG0280007496.01.T01:intron 60.0%
!!! TGCTTTTGCTGTGGTGGCGG+TGG - Chr2:16257745-16257764 MsG0280007496.01.T01:intron 60.0%
!!! TTTTGCTGTGGTGGCGGTGG+TGG - Chr2:16257748-16257767 MsG0280007496.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 16257173 16261328 16257173 ID=MsG0280007496.01;Name=MsG0280007496.01
Chr2 mRNA 16257173 16261328 16257173 ID=MsG0280007496.01.T01;Parent=MsG0280007496.01;Name=MsG0280007496.01.T01;_AED=0.26;_eAED=0.26;_QI=651|0.75|1|1|0.75|0.4|5|0|273
Chr2 exon 16257173 16257643 16257173 ID=MsG0280007496.01.T01:exon:4305;Parent=MsG0280007496.01.T01
Chr2 exon 16258238 16258338 16258238 ID=MsG0280007496.01.T01:exon:4304;Parent=MsG0280007496.01.T01
Chr2 exon 16260428 16261328 16260428 ID=MsG0280007496.01.T01:exon:4303;Parent=MsG0280007496.01.T01
Chr2 five_prime_UTR 16260678 16261328 16260678 ID=MsG0280007496.01.T01:five_prime_utr;Parent=MsG0280007496.01.T01
Chr2 CDS 16260428 16260677 16260428 ID=MsG0280007496.01.T01:cds;Parent=MsG0280007496.01.T01
Chr2 CDS 16258238 16258338 16258238 ID=MsG0280007496.01.T01:cds;Parent=MsG0280007496.01.T01
Chr2 CDS 16257173 16257643 16257173 ID=MsG0280007496.01.T01:cds;Parent=MsG0280007496.01.T01
Gene Sequence

>MsG0280007496.01.T01

ATGGGAGGAGCAAGTGATATGTCAAGAGCGTGGGAACCGTGTGATTCATTTTACTTGAGACATATGTCGGGGGATTCGGTGCTAGCTGTTGTGGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTTCCTCAACAATTTTTGATGGATTATGGATCTACTAACGTTGTTTATAAATGGAGGGCAAGGAGGGAGGTTGTTGACTGGCTCAACCATTTGGTTTCGAGGAATCTATCGCACCGTAATGGTACACTGCTGGATGATTCAGCAAATGCTGCAGGACTGGGCTCTCTTGATACGTTCGCAGATGGAATCAATGCTAATAACAGAAAAATACCTGATAAACTGGTTCATTCATTTGTGTATATTATGGCTGAAGAGGAAAATCACTATCTCGGTTACTTGGAAGATATGTATGAAGACAAAAAGAAACAAAAAAGGGTGAAAGTACGGTGGTTTCACCGTGGTCAGGAAGTCAAGCATGTGATTCCAGAGCTTGATCTTCATGAGGGTGAGGTTTTCATCACACCTAATGTTCAGGTGATCAGTGCTGAGTGCATCAATGGTCCTGCAACAGTTCTGACTCCTAAGCATTACGAGAAATACAAAGCTGAGTTGCTGCGTACCTCTTCATCTGAGATCCATGTATGTTCTAGGCAGCTTAAAAATAATAAGCTGAAACCCTTTGCACTTACTAAGCTGAGCGGTTATAGTAACCAGCCTATACTTTCTGGTTTGAATTGCCCTATTCTTCCAAAAGAAAGGCGGACTGTCCGAAATTTGAAGATGGTGGGAACTTCACTCAAGATGATCCTTTGA

Protein sequence

>MsG0280007496.01.T01

MGGASDMSRAWEPCDSFYLRHMSGDSVLAVVGTERSVRHMMYVVPQQFLMDYGSTNVVYKWRARREVVDWLNHLVSRNLSHRNGTLLDDSANAAGLGSLDTFADGINANNRKIPDKLVHSFVYIMAEEENHYLGYLEDMYEDKKKQKRVKVRWFHRGQEVKHVIPELDLHEGEVFITPNVQVISAECINGPATVLTPKHYEKYKAELLRTSSSEIHVCSRQLKNNKLKPFALTKLSGYSNQPILSGLNCPILPKERRTVRNLKMVGTSLKMIL*