Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017803.01.T01 | XP_013462165.2 | 82.383 | 596 | 49 | 7 | 1 | 549 | 1 | 587 | 0 | 977 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017803.01.T01 | Q9SIW1 | 43.807 | 436 | 160 | 15 | 147 | 549 | 99 | 482 | 7.34E-94 | 298 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017803.01.T01 | A0A072VDF1 | 82.215 | 596 | 50 | 7 | 1 | 549 | 1 | 587 | 0.0 | 974 |
Gene ID | Type | Classification |
---|---|---|
MsG0380017803.01.T01 | TF | HB-BELL |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180005977.01 | MsG0380017803.01 | -0.813335 | 2.696345e-51 | 1.755911e-48 |
MsG0380017803.01 | MsG0580024695.01 | 0.800894 | 1.163600e-48 | 5.481284e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017803.01.T01 | MTR_3g112300 | 82.215 | 596 | 50 | 7 | 1 | 549 | 1 | 587 | 0.0 | 974 |
MsG0380017803.01.T01 | MTR_3g112300 | 77.124 | 459 | 56 | 4 | 1 | 416 | 1 | 453 | 0.0 | 710 |
MsG0380017803.01.T01 | MTR_3g112300 | 93.103 | 87 | 4 | 2 | 465 | 549 | 431 | 517 | 3.90e-43 | 161 |
MsG0380017803.01.T01 | MTR_3g112300 | 79.082 | 392 | 39 | 2 | 1 | 349 | 1 | 392 | 0.0 | 627 |
MsG0380017803.01.T01 | MTR_1g023050 | 55.178 | 647 | 172 | 20 | 1 | 549 | 1 | 627 | 0.0 | 593 |
MsG0380017803.01.T01 | MTR_3g112300 | 77.898 | 371 | 39 | 2 | 1 | 328 | 1 | 371 | 0.0 | 583 |
MsG0380017803.01.T01 | MTR_1g057790 | 50.365 | 274 | 88 | 5 | 162 | 387 | 161 | 434 | 1.77e-72 | 244 |
MsG0380017803.01.T01 | MTR_8g078480 | 46.269 | 268 | 96 | 6 | 158 | 377 | 384 | 651 | 1.27e-68 | 237 |
MsG0380017803.01.T01 | MTR_5g018860 | 46.241 | 266 | 97 | 6 | 161 | 380 | 337 | 602 | 1.60e-68 | 235 |
MsG0380017803.01.T01 | MTR_4g051532 | 50.545 | 275 | 90 | 6 | 162 | 391 | 217 | 490 | 6.62e-67 | 230 |
MsG0380017803.01.T01 | MTR_7g106320 | 50.570 | 263 | 81 | 7 | 163 | 377 | 172 | 433 | 2.60e-66 | 227 |
MsG0380017803.01.T01 | MTR_3g112290 | 36.818 | 440 | 208 | 13 | 2 | 388 | 12 | 434 | 4.62e-65 | 219 |
MsG0380017803.01.T01 | MTR_8g098815 | 44.280 | 271 | 104 | 7 | 141 | 365 | 163 | 432 | 7.66e-64 | 220 |
MsG0380017803.01.T01 | MTR_7g065050 | 36.792 | 318 | 159 | 7 | 158 | 446 | 133 | 437 | 1.19e-54 | 192 |
MsG0380017803.01.T01 | MTR_2g095050 | 38.667 | 300 | 116 | 7 | 158 | 400 | 244 | 532 | 7.03e-54 | 192 |
MsG0380017803.01.T01 | MTR_4g019450 | 41.004 | 239 | 117 | 3 | 158 | 372 | 192 | 430 | 5.93e-52 | 187 |
MsG0380017803.01.T01 | MTR_1g016490 | 44.444 | 171 | 92 | 2 | 203 | 371 | 324 | 493 | 6.40e-38 | 147 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017803.01.T01 | AT2G16400 | 43.807 | 436 | 160 | 15 | 147 | 549 | 99 | 482 | 7.48e-95 | 298 |
MsG0380017803.01.T01 | AT1G75410 | 44.279 | 402 | 155 | 10 | 35 | 387 | 50 | 431 | 2.37e-91 | 290 |
MsG0380017803.01.T01 | AT1G75410 | 44.279 | 402 | 155 | 10 | 35 | 387 | 50 | 431 | 2.37e-91 | 290 |
MsG0380017803.01.T01 | AT1G19700 | 45.455 | 407 | 150 | 15 | 34 | 385 | 46 | 435 | 2.54e-89 | 285 |
MsG0380017803.01.T01 | AT1G19700 | 45.455 | 407 | 150 | 15 | 34 | 385 | 46 | 435 | 2.54e-89 | 285 |
MsG0380017803.01.T01 | AT1G19700 | 45.455 | 407 | 150 | 15 | 34 | 385 | 46 | 435 | 2.54e-89 | 285 |
MsG0380017803.01.T01 | AT1G19700 | 45.455 | 407 | 150 | 15 | 34 | 385 | 46 | 435 | 2.54e-89 | 285 |
MsG0380017803.01.T01 | AT1G19700 | 45.455 | 407 | 150 | 15 | 34 | 385 | 46 | 435 | 2.54e-89 | 285 |
MsG0380017803.01.T01 | AT4G34610 | 40.603 | 431 | 169 | 14 | 165 | 549 | 143 | 532 | 1.42e-82 | 267 |
MsG0380017803.01.T01 | AT4G34610 | 40.603 | 431 | 169 | 14 | 165 | 549 | 143 | 532 | 1.42e-82 | 267 |
MsG0380017803.01.T01 | AT4G34610 | 40.603 | 431 | 169 | 14 | 165 | 549 | 143 | 532 | 1.42e-82 | 267 |
MsG0380017803.01.T01 | AT4G34610 | 40.603 | 431 | 169 | 14 | 165 | 549 | 143 | 532 | 1.42e-82 | 267 |
MsG0380017803.01.T01 | AT1G75410 | 42.033 | 364 | 142 | 11 | 35 | 349 | 50 | 393 | 1.65e-70 | 232 |
MsG0380017803.01.T01 | AT2G23760 | 58.470 | 183 | 61 | 3 | 203 | 370 | 310 | 492 | 5.81e-67 | 228 |
MsG0380017803.01.T01 | AT2G23760 | 58.470 | 183 | 61 | 3 | 203 | 370 | 310 | 492 | 5.81e-67 | 228 |
MsG0380017803.01.T01 | AT2G23760 | 58.470 | 183 | 61 | 3 | 203 | 370 | 310 | 492 | 5.81e-67 | 228 |
MsG0380017803.01.T01 | AT2G35940 | 37.204 | 422 | 177 | 13 | 158 | 493 | 186 | 605 | 1.29e-66 | 229 |
MsG0380017803.01.T01 | AT2G35940 | 37.204 | 422 | 177 | 13 | 158 | 493 | 186 | 605 | 1.29e-66 | 229 |
MsG0380017803.01.T01 | AT2G35940 | 37.204 | 422 | 177 | 13 | 158 | 493 | 186 | 605 | 1.29e-66 | 229 |
MsG0380017803.01.T01 | AT4G36870 | 47.104 | 259 | 87 | 7 | 161 | 371 | 311 | 567 | 1.06e-64 | 224 |
MsG0380017803.01.T01 | AT4G36870 | 47.104 | 259 | 87 | 7 | 161 | 371 | 311 | 567 | 1.06e-64 | 224 |
MsG0380017803.01.T01 | AT2G27220 | 47.345 | 226 | 89 | 3 | 168 | 372 | 82 | 298 | 2.48e-64 | 216 |
MsG0380017803.01.T01 | AT2G27220 | 47.345 | 226 | 89 | 3 | 168 | 372 | 82 | 298 | 2.48e-64 | 216 |
MsG0380017803.01.T01 | AT2G27220 | 45.082 | 244 | 86 | 5 | 168 | 372 | 82 | 316 | 7.58e-61 | 207 |
MsG0380017803.01.T01 | AT2G23760 | 46.667 | 225 | 55 | 3 | 211 | 370 | 320 | 544 | 2.78e-57 | 203 |
MsG0380017803.01.T01 | AT5G41410 | 37.346 | 324 | 146 | 8 | 188 | 495 | 271 | 553 | 5.83e-55 | 196 |
MsG0380017803.01.T01 | AT1G75430 | 39.695 | 262 | 108 | 8 | 163 | 376 | 17 | 276 | 2.90e-54 | 185 |
MsG0380017803.01.T01 | AT5G02030 | 40.945 | 254 | 110 | 5 | 158 | 372 | 166 | 418 | 1.62e-49 | 180 |
MsG0380017803.01.T01 | AT4G36870 | 43.697 | 238 | 84 | 7 | 161 | 350 | 311 | 546 | 2.24e-49 | 179 |
MsG0380017803.01.T01 | AT4G36870 | 43.644 | 236 | 83 | 7 | 161 | 348 | 311 | 544 | 1.97e-48 | 177 |
MsG0380017803.01.T01 | AT2G27990 | 42.562 | 242 | 107 | 7 | 158 | 372 | 258 | 494 | 1.05e-47 | 175 |
MsG0380017803.01.T01 | AT4G32980 | 33.984 | 256 | 120 | 6 | 156 | 371 | 195 | 441 | 1.71e-35 | 139 |
MsG0380017803.01.T01 | AT4G32980 | 33.984 | 256 | 120 | 6 | 156 | 371 | 195 | 441 | 1.71e-35 | 139 |
MsG0380017803.01.T01 | AT1G75430 | 31.776 | 214 | 96 | 8 | 163 | 328 | 17 | 228 | 1.52e-22 | 98.2 |
MsG0380017803.01.T01 | AT2G27990 | 34.343 | 198 | 98 | 7 | 158 | 328 | 258 | 450 | 4.00e-22 | 99.8 |
Find 115 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATCTTTGGACATGGTTGC+TGG | 0.171008 | 3:-100797879 | MsG0380017803.01.T01:CDS |
GACTATCATTTCACAGATTC+AGG | 0.242730 | 3:-100796691 | MsG0380017803.01.T01:CDS |
TTAATGCACGTGTGCGTCTT+TGG | 0.261906 | 3:-100797203 | MsG0380017803.01.T01:CDS |
AGAGATTAATAGTAATAAAT+TGG | 0.292200 | 3:-100797076 | MsG0380017803.01.T01:CDS |
GCAAATTGTGGTGTCATCTT+TGG | 0.309506 | 3:-100797892 | MsG0380017803.01.T01:CDS |
CCCAACCAAGCATTCTCTTC+AGG | 0.317247 | 3:-100798948 | MsG0380017803.01.T01:CDS |
CATCTTTGGACATGGTTGCT+GGG | 0.322770 | 3:-100797878 | MsG0380017803.01.T01:CDS |
CCTTAAGATATTGAGAGTTT+AGG | 0.323728 | 3:+100798466 | None:intergenic |
CCTAAACTCTCAATATCTTA+AGG | 0.324664 | 3:-100798466 | MsG0380017803.01.T01:CDS |
TTTCCATTCCATGTTGCTTT+CGG | 0.331914 | 3:+100798409 | None:intergenic |
CTCCAAGGTAAAAGAGATTA+TGG | 0.332690 | 3:-100797102 | MsG0380017803.01.T01:CDS |
GAAATATACAAAGAAGAGTT+TGG | 0.368762 | 3:-100797165 | MsG0380017803.01.T01:CDS |
CGCAATGCAAGTGTAGTATA+TGG | 0.380736 | 3:+100797840 | None:intergenic |
CACATATGATTTAACAGAGT+TGG | 0.383789 | 3:-100796881 | MsG0380017803.01.T01:CDS |
GTTGGGAAAACACTCCCTTT+TGG | 0.402879 | 3:+100798542 | None:intergenic |
AAGTGATTCAAAGGAACCTT+GGG | 0.404482 | 3:-100797764 | MsG0380017803.01.T01:CDS |
ATTCTCTTCAGGGTCCTATA+TGG | 0.406017 | 3:-100798937 | MsG0380017803.01.T01:CDS |
TATGGTATCAGGTGGCAAAT+TGG | 0.411576 | 3:-100797230 | MsG0380017803.01.T01:intron |
AATGTGATAGATTGTGGAAA+TGG | 0.412066 | 3:-100796973 | MsG0380017803.01.T01:CDS |
TTGAGAGTTTAGGAAAATGT+TGG | 0.412411 | 3:+100798476 | None:intergenic |
CGAAACCGGTGTCATTATAC+TGG | 0.413951 | 3:+100798679 | None:intergenic |
GGAAAGCAACAACACATGTT+TGG | 0.421673 | 3:-100796670 | MsG0380017803.01.T01:CDS |
TCATTATACTGGTATTGAAA+TGG | 0.422426 | 3:+100798690 | None:intergenic |
TGATCTGAGGAGTGAGGGTT+GGG | 0.428043 | 3:+100798525 | None:intergenic |
CCAACCAAGCATTCTCTTCA+GGG | 0.428447 | 3:-100798947 | MsG0380017803.01.T01:CDS |
ATAATAATATTACAGATGAT+TGG | 0.428620 | 3:-100796406 | MsG0380017803.01.T01:three_prime_UTR |
AACTGGTTTGACAAGGAATC+AGG | 0.432153 | 3:-100797368 | MsG0380017803.01.T01:intron |
ACATATGATTTAACAGAGTT+GGG | 0.435731 | 3:-100796880 | MsG0380017803.01.T01:CDS |
CTGTTTCAATACTTCGTGCT+TGG | 0.440367 | 3:-100797620 | MsG0380017803.01.T01:CDS |
TCCTTTGAATCACTTGAACT+TGG | 0.447044 | 3:+100797772 | None:intergenic |
ATTCATCAGCGATACGAAAC+CGG | 0.447145 | 3:+100798665 | None:intergenic |
ATAATGCTAGCTAGGCAAAC+TGG | 0.452403 | 3:-100797385 | MsG0380017803.01.T01:CDS |
CCCTGAAGAGAATGCTTGGT+TGG | 0.454991 | 3:+100798947 | None:intergenic |
TTGTATATTTCCTCAACCAT+TGG | 0.456824 | 3:+100797177 | None:intergenic |
AGACATGCTTTCCATGCATT+CGG | 0.460937 | 3:+100798587 | None:intergenic |
TTAGATATAGTAGTTCCCTT+TGG | 0.461116 | 3:+100798630 | None:intergenic |
CAAAAGGCACTTCAGCATCT+TGG | 0.463824 | 3:-100797690 | MsG0380017803.01.T01:CDS |
GGAGGGACAGATGCATTAGA+AGG | 0.464657 | 3:+100798711 | None:intergenic |
TGCATGGAAAGCATGTCTTC+CGG | 0.466072 | 3:-100798582 | MsG0380017803.01.T01:CDS |
ATCTTTGGACATGGTTGCTG+GGG | 0.467421 | 3:-100797877 | MsG0380017803.01.T01:CDS |
CAGAGAAAATAATGCTAGCT+AGG | 0.467771 | 3:-100797393 | MsG0380017803.01.T01:CDS |
AAACAACAGCATATGGTTTG+AGG | 0.471400 | 3:+100796551 | None:intergenic |
ACCAAGTTTAACACACCTAT+AGG | 0.472281 | 3:-100798846 | MsG0380017803.01.T01:CDS |
CGAGGTGAACATATCCATAT+AGG | 0.479681 | 3:+100798923 | None:intergenic |
ATAGTCACTGTGTCGCCTAT+AGG | 0.482382 | 3:+100798831 | None:intergenic |
CAAGTGATTCAAAGGAACCT+TGG | 0.483068 | 3:-100797765 | MsG0380017803.01.T01:CDS |
TACATGTTGTCTAGTGGAAG+AGG | 0.483872 | 3:+100797002 | None:intergenic |
CTCCTCAGATCACTGCCTGC+AGG | 0.488491 | 3:-100798514 | MsG0380017803.01.T01:CDS |
GCCTATAGGTGTGTTAAACT+TGG | 0.490982 | 3:+100798845 | None:intergenic |
GGTAATGTCATGAAATCCTC+CGG | 0.496563 | 3:+100798563 | None:intergenic |
TCACAATGTCTCTCTTGCAT+TGG | 0.504072 | 3:-100796827 | MsG0380017803.01.T01:CDS |
AGCATTGGAATGCTCATCAA+TGG | 0.509427 | 3:+100798803 | None:intergenic |
CCAACAGCTTAGGCAACAAA+AGG | 0.510811 | 3:-100797706 | MsG0380017803.01.T01:CDS |
CGAGACTAAGAGATAACTCT+TGG | 0.512889 | 3:+100798745 | None:intergenic |
ACACCACAATTTGCATTCGA+TGG | 0.516116 | 3:+100797901 | None:intergenic |
TACATGAGAGCTGTAAGCAT+TGG | 0.517302 | 3:+100798788 | None:intergenic |
CCTGAAGAGAATGCTTGGTT+GGG | 0.517326 | 3:+100798948 | None:intergenic |
GATTTCATGACATTACCAAA+AGG | 0.521517 | 3:-100798557 | MsG0380017803.01.T01:CDS |
TCATCTGAAAATACACTCCA+AGG | 0.523657 | 3:-100797117 | MsG0380017803.01.T01:CDS |
TGTCCGAAAGCAACATGGAA+TGG | 0.523675 | 3:-100798412 | MsG0380017803.01.T01:CDS |
GTGATCTGAGGAGTGAGGGT+TGG | 0.527310 | 3:+100798524 | None:intergenic |
CAAGAGTTATCTCTTAGTCT+CGG | 0.528666 | 3:-100798744 | MsG0380017803.01.T01:CDS |
AATTCTTGTCGTCTTCCAAA+GGG | 0.529186 | 3:-100798645 | MsG0380017803.01.T01:CDS |
GAATTCTTGTCGTCTTCCAA+AGG | 0.533875 | 3:-100798646 | MsG0380017803.01.T01:CDS |
TAAGCTGTTGGTCCACGTAC+CGG | 0.539458 | 3:+100797718 | None:intergenic |
AAGAGTTATCTCTTAGTCTC+GGG | 0.540585 | 3:-100798743 | MsG0380017803.01.T01:CDS |
AGGACCCTGAAGAGAATGCT+TGG | 0.541911 | 3:+100798943 | None:intergenic |
GTATTCCTTCTTGTTCCCCA+AGG | 0.544341 | 3:+100797748 | None:intergenic |
ATTTCATGACATTACCAAAA+GGG | 0.544569 | 3:-100798556 | MsG0380017803.01.T01:CDS |
TCTTTGGACATGGTTGCTGG+GGG | 0.546073 | 3:-100797876 | MsG0380017803.01.T01:CDS |
ACCAAGTTCAAGTGATTCAA+AGG | 0.549397 | 3:-100797773 | MsG0380017803.01.T01:CDS |
GGTACGTGGACCAACAGCTT+AGG | 0.555219 | 3:-100797716 | MsG0380017803.01.T01:CDS |
TTGGTGTTATGCGGCAAGCA+TGG | 0.558919 | 3:-100797671 | MsG0380017803.01.T01:CDS |
CACTGCCTGCAGGATTCACA+AGG | 0.565086 | 3:-100798504 | MsG0380017803.01.T01:CDS |
ATTGAAAAGTGCCGAATGCA+TGG | 0.565403 | 3:-100798598 | MsG0380017803.01.T01:CDS |
CAACTCTGTTAAATCATATG+TGG | 0.566114 | 3:+100796882 | None:intergenic |
TAATAATAATAATCAGACAT+TGG | 0.566437 | 3:-100796743 | MsG0380017803.01.T01:CDS |
TTCAGCATCTTGGTGTTATG+CGG | 0.567244 | 3:-100797680 | MsG0380017803.01.T01:CDS |
GATAATCCCAAAGATAGTGA+TGG | 0.570048 | 3:-100798358 | MsG0380017803.01.T01:CDS |
TTATACTGGTATTGAAATGG+AGG | 0.572976 | 3:+100798693 | None:intergenic |
AAGAAGGAATACCTCGTCTC+CGG | 0.574564 | 3:-100797737 | MsG0380017803.01.T01:CDS |
AGGAACCTTGGGGAACAAGA+AGG | 0.579072 | 3:-100797753 | MsG0380017803.01.T01:CDS |
AATACCTCGTCTCCGGTACG+TGG | 0.579283 | 3:-100797730 | MsG0380017803.01.T01:CDS |
TCTTTGGAAACCAATGGTTG+AGG | 0.583656 | 3:-100797187 | MsG0380017803.01.T01:CDS |
TTGAGAAACTGTGAAAGCGA+TGG | 0.592333 | 3:-100796802 | MsG0380017803.01.T01:CDS |
GGTAACTTTACAACTGTGGA+TGG | 0.593227 | 3:-100796859 | MsG0380017803.01.T01:CDS |
AACGTACAAAATATACAGAT+AGG | 0.594200 | 3:-100796469 | MsG0380017803.01.T01:three_prime_UTR |
ATGAATGGCATCATCAGATG+TGG | 0.596558 | 3:+100796774 | None:intergenic |
CAATACCAGTATAATGACAC+CGG | 0.603044 | 3:-100798684 | MsG0380017803.01.T01:CDS |
GAAAATTGCATGGCAACCAA+AGG | 0.604743 | 3:-100796951 | MsG0380017803.01.T01:CDS |
GTTAATGTCCGAAAGCAACA+TGG | 0.605991 | 3:-100798417 | MsG0380017803.01.T01:CDS |
TCAATATCTTAAGGCTACAC+AGG | 0.606571 | 3:-100798457 | MsG0380017803.01.T01:CDS |
GGCAGTGATCTGAGGAGTGA+GGG | 0.610386 | 3:+100798520 | None:intergenic |
TTTACAACTGTGGATGGTGG+TGG | 0.611372 | 3:-100796853 | MsG0380017803.01.T01:CDS |
GGTTGATACCAGTTACCCCA+AGG | 0.615136 | 3:-100797419 | MsG0380017803.01.T01:intron |
AACTTTACAACTGTGGATGG+TGG | 0.616544 | 3:-100796856 | MsG0380017803.01.T01:CDS |
CTAGGCAAACTGGTTTGACA+AGG | 0.616619 | 3:-100797375 | MsG0380017803.01.T01:CDS |
GATTCGTTGTAGTAATTGTG+AGG | 0.618741 | 3:+100798888 | None:intergenic |
AGGCAGTGATCTGAGGAGTG+AGG | 0.618773 | 3:+100798519 | None:intergenic |
TGGTCCACGTACCGGAGACG+AGG | 0.620141 | 3:+100797726 | None:intergenic |
ATCCTGCAGGCAGTGATCTG+AGG | 0.622811 | 3:+100798512 | None:intergenic |
TAGTAATTGTGAGGTAACAA+AGG | 0.627033 | 3:+100798897 | None:intergenic |
TGTGGTGTCATCTTTGGACA+TGG | 0.628842 | 3:-100797886 | MsG0380017803.01.T01:CDS |
GTTGGGTAACTTTACAACTG+TGG | 0.629995 | 3:-100796863 | MsG0380017803.01.T01:CDS |
TGTGGAAATGGAAAATTGCA+TGG | 0.642335 | 3:-100796961 | MsG0380017803.01.T01:CDS |
TGTGCGTCTTTGGAAACCAA+TGG | 0.645810 | 3:-100797193 | MsG0380017803.01.T01:CDS |
GATTATCCAATCCAATGATG+CGG | 0.653767 | 3:+100798374 | None:intergenic |
ATGCAAGAGAGACATTGTGA+TGG | 0.664466 | 3:+100796830 | None:intergenic |
TATACTGGTATTGAAATGGA+GGG | 0.666797 | 3:+100798694 | None:intergenic |
AAAGGTATCTTATCTCTGAG+AGG | 0.672450 | 3:-100796581 | MsG0380017803.01.T01:three_prime_UTR |
GTGAGGTAACAAAGGACTCG+AGG | 0.675570 | 3:+100798905 | None:intergenic |
CTGCCATCGAATGCAAATTG+TGG | 0.686632 | 3:-100797904 | MsG0380017803.01.T01:CDS |
ATGGAAAGCATGTCTTCCGG+AGG | 0.687343 | 3:-100798579 | MsG0380017803.01.T01:CDS |
AGTGATTCAAAGGAACCTTG+GGG | 0.732244 | 3:-100797763 | MsG0380017803.01.T01:CDS |
CAAGCATGGAGACCTCAGAG+AGG | 0.733220 | 3:-100797657 | MsG0380017803.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAAATGAAAAATATCTT+TGG | + | Chr3:100798720-100798739 | None:intergenic | 10.0% |
!!! | TATTTTTCATTTTTTACTAA+AGG | - | Chr3:100798724-100798743 | MsG0380017803.01.T01:CDS | 10.0% |
!! | AGAGATTAATAGTAATAAAT+TGG | - | Chr3:100798247-100798266 | MsG0380017803.01.T01:intron | 15.0% |
!! | ATAATAATATTACAGATGAT+TGG | - | Chr3:100798917-100798936 | MsG0380017803.01.T01:CDS | 15.0% |
!! | ATACAAATTAAATCCATAAA+AGG | + | Chr3:100797159-100797178 | None:intergenic | 15.0% |
!! | TAATAATAATAATCAGACAT+TGG | - | Chr3:100798580-100798599 | MsG0380017803.01.T01:CDS | 15.0% |
!!! | ATCTTTTAATTTATATGGTA+TGG | - | Chr3:100798075-100798094 | MsG0380017803.01.T01:intron | 15.0% |
!!! | ATTATTATGTCTTTTATGAA+TGG | + | Chr3:100798567-100798586 | None:intergenic | 15.0% |
!!! | TTATCATATCTAACTTTTAT+TGG | - | Chr3:100797243-100797262 | MsG0380017803.01.T01:intron | 15.0% |
!! | AAATTAAATCCATAAAAGGA+AGG | + | Chr3:100797155-100797174 | None:intergenic | 20.0% |
!! | AATTTAAAAACAACAGCATA+TGG | + | Chr3:100798782-100798801 | None:intergenic | 20.0% |
!! | GAAAATATAAAATTGAGTGA+AGG | + | Chr3:100797788-100797807 | None:intergenic | 20.0% |
!! | GTATTATAAAGTAACACATA+CGG | + | Chr3:100797750-100797769 | None:intergenic | 20.0% |
!! | TTCAACTTTCATTTCATAAT+TGG | - | Chr3:100797883-100797902 | MsG0380017803.01.T01:CDS | 20.0% |
!!! | ATATTTTCAATTAGTTGCAA+TGG | - | Chr3:100797800-100797819 | MsG0380017803.01.T01:CDS | 20.0% |
!!! | GTGTCATCTTTTAATTTATA+TGG | - | Chr3:100798070-100798089 | MsG0380017803.01.T01:intron | 20.0% |
! | AACGTACAAAATATACAGAT+AGG | - | Chr3:100798854-100798873 | MsG0380017803.01.T01:CDS | 25.0% |
! | AATTTATATGGTATGGTATC+AGG | - | Chr3:100798082-100798101 | MsG0380017803.01.T01:intron | 25.0% |
! | ACATATGATTTAACAGAGTT+GGG | - | Chr3:100798443-100798462 | MsG0380017803.01.T01:CDS | 25.0% |
! | AGTGCAAAAACTTTATCATA+AGG | - | Chr3:100797195-100797214 | MsG0380017803.01.T01:CDS | 25.0% |
! | ATTTCATGACATTACCAAAA+GGG | - | Chr3:100796767-100796786 | MsG0380017803.01.T01:CDS | 25.0% |
! | GAAAAAAATGTGATAGATTG+TGG | - | Chr3:100798344-100798363 | MsG0380017803.01.T01:intron | 25.0% |
! | GAAATATACAAAGAAGAGTT+TGG | - | Chr3:100798158-100798177 | MsG0380017803.01.T01:intron | 25.0% |
!! | ATTATTTTCTCTGAATCCTT+GGG | + | Chr3:100797923-100797942 | None:intergenic | 25.0% |
!! | TATTCTCTTCTTTTATTCCA+TGG | - | Chr3:100797308-100797327 | MsG0380017803.01.T01:intron | 25.0% |
!! | TCATTATACTGGTATTGAAA+TGG | + | Chr3:100796636-100796655 | None:intergenic | 25.0% |
!!! | AAGTATTGAAACAGAGTTTT+CGG | + | Chr3:100797697-100797716 | None:intergenic | 25.0% |
!!! | ATCACTTTTATGAACAATGA+GGG | + | Chr3:100798824-100798843 | None:intergenic | 25.0% |
AATGTGATAGATTGTGGAAA+TGG | - | Chr3:100798350-100798369 | MsG0380017803.01.T01:CDS | 30.0% | |
AGTGAAGGATTAGAATTTAG+AGG | + | Chr3:100797773-100797792 | None:intergenic | 30.0% | |
CAACTCTGTTAAATCATATG+TGG | + | Chr3:100798444-100798463 | None:intergenic | 30.0% | |
CACATATGATTTAACAGAGT+TGG | - | Chr3:100798442-100798461 | MsG0380017803.01.T01:CDS | 30.0% | |
CCTAAACTCTCAATATCTTA+AGG | - | Chr3:100796857-100796876 | MsG0380017803.01.T01:CDS | 30.0% | |
CCTTAAGATATTGAGAGTTT+AGG | + | Chr3:100796860-100796879 | None:intergenic | 30.0% | |
GAATAATTGTCACACACTAT+CGG | + | Chr3:100797293-100797312 | None:intergenic | 30.0% | |
GATTTCATGACATTACCAAA+AGG | - | Chr3:100796766-100796785 | MsG0380017803.01.T01:CDS | 30.0% | |
GGATGCAATGCTAAATAATA+TGG | + | Chr3:100797134-100797153 | None:intergenic | 30.0% | |
GGATTGGAATTAGAATCATT+AGG | + | Chr3:100797031-100797050 | None:intergenic | 30.0% | |
GTGAAGGATTAGAATTTAGA+GGG | + | Chr3:100797772-100797791 | None:intergenic | 30.0% | |
TAGTAATTGTGAGGTAACAA+AGG | + | Chr3:100796429-100796448 | None:intergenic | 30.0% | |
TCAGTCTATGCAAATAACTT+CGG | - | Chr3:100797000-100797019 | MsG0380017803.01.T01:CDS | 30.0% | |
TTAAAAGATGACACCACAAT+TGG | + | Chr3:100798064-100798083 | None:intergenic | 30.0% | |
TTAGATATAGTAGTTCCCTT+TGG | + | Chr3:100796696-100796715 | None:intergenic | 30.0% | |
TTGAGAGTTTAGGAAAATGT+TGG | + | Chr3:100796850-100796869 | None:intergenic | 30.0% | |
TTGTATATTTCCTCAACCAT+TGG | + | Chr3:100798149-100798168 | None:intergenic | 30.0% | |
! | AGATTTTCCATCACTATCTT+TGG | + | Chr3:100796975-100796994 | None:intergenic | 30.0% |
! | ATCCAACAAATTCTGTCTTT+TGG | + | Chr3:100797074-100797093 | None:intergenic | 30.0% |
! | CATTATTTTCTCTGAATCCT+TGG | + | Chr3:100797924-100797943 | None:intergenic | 30.0% |
! | GATTTTCCATCACTATCTTT+GGG | + | Chr3:100796974-100796993 | None:intergenic | 30.0% |
! | TATACTGGTATTGAAATGGA+GGG | + | Chr3:100796632-100796651 | None:intergenic | 30.0% |
! | TTATACTGGTATTGAAATGG+AGG | + | Chr3:100796633-100796652 | None:intergenic | 30.0% |
! | TTATTTTCTCTGAATCCTTG+GGG | + | Chr3:100797922-100797941 | None:intergenic | 30.0% |
! | TTTTTCTACATGTTGTCTAG+TGG | + | Chr3:100798330-100798349 | None:intergenic | 30.0% |
!! | AGTATTGAAACAGAGTTTTC+GGG | + | Chr3:100797696-100797715 | None:intergenic | 30.0% |
!! | CATCACTTTTATGAACAATG+AGG | + | Chr3:100798825-100798844 | None:intergenic | 30.0% |
!!! | ATTGGTTCTATTTTATCTGC+AGG | - | Chr3:100798935-100798954 | MsG0380017803.01.T01:CDS | 30.0% |
AAAAATCCGCATCATTGGAT+TGG | - | Chr3:100796943-100796962 | MsG0380017803.01.T01:CDS | 35.0% | |
AAACAACAGCATATGGTTTG+AGG | + | Chr3:100798775-100798794 | None:intergenic | 35.0% | |
AAGAGTTATCTCTTAGTCTC+GGG | - | Chr3:100796580-100796599 | MsG0380017803.01.T01:three_prime_UTR | 35.0% | |
AAGTGATTCAAAGGAACCTT+GGG | - | Chr3:100797559-100797578 | MsG0380017803.01.T01:intron | 35.0% | |
AATTCTTGTCGTCTTCCAAA+GGG | - | Chr3:100796678-100796697 | MsG0380017803.01.T01:CDS | 35.0% | |
ACCAAGTTCAAGTGATTCAA+AGG | - | Chr3:100797550-100797569 | MsG0380017803.01.T01:intron | 35.0% | |
ACCAAGTTTAACACACCTAT+AGG | - | Chr3:100796477-100796496 | MsG0380017803.01.T01:three_prime_UTR | 35.0% | |
AGCCAAAAGACAGAATTTGT+TGG | - | Chr3:100797069-100797088 | MsG0380017803.01.T01:CDS | 35.0% | |
CAAAGGCTCAGCATAAAAAA+TGG | - | Chr3:100798389-100798408 | MsG0380017803.01.T01:CDS | 35.0% | |
CAAGAGTTATCTCTTAGTCT+CGG | - | Chr3:100796579-100796598 | MsG0380017803.01.T01:three_prime_UTR | 35.0% | |
CAATACCAGTATAATGACAC+CGG | - | Chr3:100796639-100796658 | MsG0380017803.01.T01:CDS | 35.0% | |
CAGAGAAAATAATGCTAGCT+AGG | - | Chr3:100797930-100797949 | MsG0380017803.01.T01:CDS | 35.0% | |
CAGTCTATGCAAATAACTTC+GGG | - | Chr3:100797001-100797020 | MsG0380017803.01.T01:CDS | 35.0% | |
CTCCAAGGTAAAAGAGATTA+TGG | - | Chr3:100798221-100798240 | MsG0380017803.01.T01:intron | 35.0% | |
CTGTAATCCTTTCTTTGTAC+TGG | - | Chr3:100797367-100797386 | MsG0380017803.01.T01:intron | 35.0% | |
GACTATCATTTCACAGATTC+AGG | - | Chr3:100798632-100798651 | MsG0380017803.01.T01:CDS | 35.0% | |
GATAATCCCAAAGATAGTGA+TGG | - | Chr3:100796965-100796984 | MsG0380017803.01.T01:CDS | 35.0% | |
GATTATCCAATCCAATGATG+CGG | + | Chr3:100796952-100796971 | None:intergenic | 35.0% | |
GATTCGTTGTAGTAATTGTG+AGG | + | Chr3:100796438-100796457 | None:intergenic | 35.0% | |
TCAATATCTTAAGGCTACAC+AGG | - | Chr3:100796866-100796885 | MsG0380017803.01.T01:CDS | 35.0% | |
TCATCTGAAAATACACTCCA+AGG | - | Chr3:100798206-100798225 | MsG0380017803.01.T01:intron | 35.0% | |
TCCTTTGAATCACTTGAACT+TGG | + | Chr3:100797554-100797573 | None:intergenic | 35.0% | |
TGTGGAAATGGAAAATTGCA+TGG | - | Chr3:100798362-100798381 | MsG0380017803.01.T01:CDS | 35.0% | |
TTATATGGTATGGTATCAGG+TGG | - | Chr3:100798085-100798104 | MsG0380017803.01.T01:intron | 35.0% | |
TTCCATGGTTATTATGACAG+CGG | - | Chr3:100797323-100797342 | MsG0380017803.01.T01:intron | 35.0% | |
! | ACTTGTTGCATTGCATAATC+AGG | - | Chr3:100798030-100798049 | MsG0380017803.01.T01:intron | 35.0% |
! | GACCATAATCTCTTTTACCT+TGG | + | Chr3:100798226-100798245 | None:intergenic | 35.0% |
!! | AAAGGTATCTTATCTCTGAG+AGG | - | Chr3:100798742-100798761 | MsG0380017803.01.T01:CDS | 35.0% |
!! | TTTCCATTCCATGTTGCTTT+CGG | + | Chr3:100796917-100796936 | None:intergenic | 35.0% |
!!! | CATTTTTTATGCTGAGCCTT+TGG | + | Chr3:100798391-100798410 | None:intergenic | 35.0% |
AAAAACCTTGTGAATCCTGC+AGG | + | Chr3:100796827-100796846 | None:intergenic | 40.0% | |
AACTTTACAACTGTGGATGG+TGG | - | Chr3:100798467-100798486 | MsG0380017803.01.T01:CDS | 40.0% | |
ACACCACAATTTGCATTCGA+TGG | + | Chr3:100797425-100797444 | None:intergenic | 40.0% | |
AGACATGCTTTCCATGCATT+CGG | + | Chr3:100796739-100796758 | None:intergenic | 40.0% | |
AGTGATTCAAAGGAACCTTG+GGG | - | Chr3:100797560-100797579 | MsG0380017803.01.T01:intron | 40.0% | |
ATAATGCTAGCTAGGCAAAC+TGG | - | Chr3:100797938-100797957 | MsG0380017803.01.T01:intron | 40.0% | |
ATGAATGGCATCATCAGATG+TGG | + | Chr3:100798552-100798571 | None:intergenic | 40.0% | |
ATGCAAGAGAGACATTGTGA+TGG | + | Chr3:100798496-100798515 | None:intergenic | 40.0% | |
ATTCATCAGCGATACGAAAC+CGG | + | Chr3:100796661-100796680 | None:intergenic | 40.0% | |
ATTCTCTTCAGGGTCCTATA+TGG | - | Chr3:100796386-100796405 | MsG0380017803.01.T01:three_prime_UTR | 40.0% | |
CAAGTGATTCAAAGGAACCT+TGG | - | Chr3:100797558-100797577 | MsG0380017803.01.T01:intron | 40.0% | |
CCTACAACCAGTACAAAGAA+AGG | + | Chr3:100797377-100797396 | None:intergenic | 40.0% | |
CGAGACTAAGAGATAACTCT+TGG | + | Chr3:100796581-100796600 | None:intergenic | 40.0% | |
CGAGGTGAACATATCCATAT+AGG | + | Chr3:100796403-100796422 | None:intergenic | 40.0% | |
CGCAATGCAAGTGTAGTATA+TGG | + | Chr3:100797486-100797505 | None:intergenic | 40.0% | |
CTGTTTCAATACTTCGTGCT+TGG | - | Chr3:100797703-100797722 | MsG0380017803.01.T01:CDS | 40.0% | |
GAAAATTGCATGGCAACCAA+AGG | - | Chr3:100798372-100798391 | MsG0380017803.01.T01:CDS | 40.0% | |
GAATTCTTGTCGTCTTCCAA+AGG | - | Chr3:100796677-100796696 | MsG0380017803.01.T01:CDS | 40.0% | |
GCAAGAAAAATCCGCATCAT+TGG | - | Chr3:100796938-100796957 | MsG0380017803.01.T01:CDS | 40.0% | |
GCCTATAGGTGTGTTAAACT+TGG | + | Chr3:100796481-100796500 | None:intergenic | 40.0% | |
GGAAAGCAACAACACATGTT+TGG | - | Chr3:100798653-100798672 | MsG0380017803.01.T01:CDS | 40.0% | |
GGATATCTCACAAGAAGGAT+TGG | + | Chr3:100797047-100797066 | None:intergenic | 40.0% | |
GGTAACTTTACAACTGTGGA+TGG | - | Chr3:100798464-100798483 | MsG0380017803.01.T01:CDS | 40.0% | |
GGTAATGTCATGAAATCCTC+CGG | + | Chr3:100796763-100796782 | None:intergenic | 40.0% | |
GTTAATGTCCGAAAGCAACA+TGG | - | Chr3:100796906-100796925 | MsG0380017803.01.T01:CDS | 40.0% | |
GTTGGGTAACTTTACAACTG+TGG | - | Chr3:100798460-100798479 | MsG0380017803.01.T01:CDS | 40.0% | |
TACATGAGAGCTGTAAGCAT+TGG | + | Chr3:100796538-100796557 | None:intergenic | 40.0% | |
TACATGTTGTCTAGTGGAAG+AGG | + | Chr3:100798324-100798343 | None:intergenic | 40.0% | |
TATGGTATCAGGTGGCAAAT+TGG | - | Chr3:100798093-100798112 | MsG0380017803.01.T01:intron | 40.0% | |
TATGGTTACCTCATCCAACA+TGG | + | Chr3:100797116-100797135 | None:intergenic | 40.0% | |
TCACAATGTCTCTCTTGCAT+TGG | - | Chr3:100798496-100798515 | MsG0380017803.01.T01:CDS | 40.0% | |
TCAGGTACAGTTACCAATTG+TGG | - | Chr3:100798048-100798067 | MsG0380017803.01.T01:intron | 40.0% | |
TCTATGCAAATAACTTCGGG+CGG | - | Chr3:100797004-100797023 | MsG0380017803.01.T01:CDS | 40.0% | |
TTATTATGACAGCGGTGGTT+TGG | - | Chr3:100797331-100797350 | MsG0380017803.01.T01:intron | 40.0% | |
TTGAGAAACTGTGAAAGCGA+TGG | - | Chr3:100798521-100798540 | MsG0380017803.01.T01:CDS | 40.0% | |
! | AGCATTGGAATGCTCATCAA+TGG | + | Chr3:100796523-100796542 | None:intergenic | 40.0% |
! | GACAAAGCTTTTGTCCATGT+TGG | - | Chr3:100797099-100797118 | MsG0380017803.01.T01:CDS | 40.0% |
! | GCATTGCATCCTTCCTTTTA+TGG | - | Chr3:100797143-100797162 | MsG0380017803.01.T01:CDS | 40.0% |
! | TCTTTGGAAACCAATGGTTG+AGG | - | Chr3:100798136-100798155 | MsG0380017803.01.T01:intron | 40.0% |
!! | AACTGGTTTGACAAGGAATC+AGG | - | Chr3:100797955-100797974 | MsG0380017803.01.T01:intron | 40.0% |
!! | ATTGAAAAGTGCCGAATGCA+TGG | - | Chr3:100796725-100796744 | MsG0380017803.01.T01:CDS | 40.0% |
!! | CAAATTCTGTCTTTTGGCTG+AGG | + | Chr3:100797068-100797087 | None:intergenic | 40.0% |
!! | CCTTTCTTTGTACTGGTTGT+AGG | - | Chr3:100797374-100797393 | MsG0380017803.01.T01:CDS | 40.0% |
!! | GCAAATTGTGGTGTCATCTT+TGG | - | Chr3:100797431-100797450 | MsG0380017803.01.T01:intron | 40.0% |
!! | TCTTTGTACTGGTTGTAGGT+AGG | - | Chr3:100797378-100797397 | MsG0380017803.01.T01:CDS | 40.0% |
!! | TTCAGCATCTTGGTGTTATG+CGG | - | Chr3:100797643-100797662 | MsG0380017803.01.T01:CDS | 40.0% |
AAGAAGGAATACCTCGTCTC+CGG | - | Chr3:100797586-100797605 | MsG0380017803.01.T01:intron | 45.0% | |
ATAGTCACTGTGTCGCCTAT+AGG | + | Chr3:100796495-100796514 | None:intergenic | 45.0% | |
ATCTTTGGACATGGTTGCTG+GGG | - | Chr3:100797446-100797465 | MsG0380017803.01.T01:intron | 45.0% | |
CACCGCTGTCATAATAACCA+TGG | + | Chr3:100797328-100797347 | None:intergenic | 45.0% | |
CATCTTTGGACATGGTTGCT+GGG | - | Chr3:100797445-100797464 | MsG0380017803.01.T01:intron | 45.0% | |
CATGGTTATTATGACAGCGG+TGG | - | Chr3:100797326-100797345 | MsG0380017803.01.T01:intron | 45.0% | |
CCAACAGCTTAGGCAACAAA+AGG | - | Chr3:100797617-100797636 | MsG0380017803.01.T01:CDS | 45.0% | |
CCAACCAAGCATTCTCTTCA+GGG | - | Chr3:100796376-100796395 | MsG0380017803.01.T01:three_prime_UTR | 45.0% | |
CCTGAAGAGAATGCTTGGTT+GGG | + | Chr3:100796378-100796397 | None:intergenic | 45.0% | |
CTGCCATCGAATGCAAATTG+TGG | - | Chr3:100797419-100797438 | MsG0380017803.01.T01:intron | 45.0% | |
GCTGAGGATATCTCACAAGA+AGG | + | Chr3:100797052-100797071 | None:intergenic | 45.0% | |
GTATTCCTTCTTGTTCCCCA+AGG | + | Chr3:100797578-100797597 | None:intergenic | 45.0% | |
TCATCTTTGGACATGGTTGC+TGG | - | Chr3:100797444-100797463 | MsG0380017803.01.T01:intron | 45.0% | |
TGTCCGAAAGCAACATGGAA+TGG | - | Chr3:100796911-100796930 | MsG0380017803.01.T01:CDS | 45.0% | |
TTAATGCACGTGTGCGTCTT+TGG | - | Chr3:100798120-100798139 | MsG0380017803.01.T01:intron | 45.0% | |
! | CCTTTTGTTGCCTAAGCTGT+TGG | + | Chr3:100797620-100797639 | None:intergenic | 45.0% |
! | GCTTTTGTCCATGTTGGATG+AGG | - | Chr3:100797105-100797124 | MsG0380017803.01.T01:CDS | 45.0% |
! | GTTGGGAAAACACTCCCTTT+TGG | + | Chr3:100796784-100796803 | None:intergenic | 45.0% |
! | TGCATGGAAAGCATGTCTTC+CGG | - | Chr3:100796741-100796760 | MsG0380017803.01.T01:CDS | 45.0% |
! | TGTGCGTCTTTGGAAACCAA+TGG | - | Chr3:100798130-100798149 | MsG0380017803.01.T01:intron | 45.0% |
! | TTTACAACTGTGGATGGTGG+TGG | - | Chr3:100798470-100798489 | MsG0380017803.01.T01:CDS | 45.0% |
!! | CAAAAGGCACTTCAGCATCT+TGG | - | Chr3:100797633-100797652 | MsG0380017803.01.T01:CDS | 45.0% |
!! | CGAAACCGGTGTCATTATAC+TGG | + | Chr3:100796647-100796666 | None:intergenic | 45.0% |
!! | CTAGGCAAACTGGTTTGACA+AGG | - | Chr3:100797948-100797967 | MsG0380017803.01.T01:intron | 45.0% |
!! | TGTGGTGTCATCTTTGGACA+TGG | - | Chr3:100797437-100797456 | MsG0380017803.01.T01:intron | 45.0% |
AGGAACCTTGGGGAACAAGA+AGG | - | Chr3:100797570-100797589 | MsG0380017803.01.T01:intron | 50.0% | |
AGGACCCTGAAGAGAATGCT+TGG | + | Chr3:100796383-100796402 | None:intergenic | 50.0% | |
CCCAACCAAGCATTCTCTTC+AGG | - | Chr3:100796375-100796394 | MsG0380017803.01.T01:three_prime_UTR | 50.0% | |
CCCTGAAGAGAATGCTTGGT+TGG | + | Chr3:100796379-100796398 | None:intergenic | 50.0% | |
CTCTGAATCCTTGGGGTAAC+TGG | + | Chr3:100797915-100797934 | None:intergenic | 50.0% | |
GGAGGGACAGATGCATTAGA+AGG | + | Chr3:100796615-100796634 | None:intergenic | 50.0% | |
GTGAGGTAACAAAGGACTCG+AGG | + | Chr3:100796421-100796440 | None:intergenic | 50.0% | |
TAAGCTGTTGGTCCACGTAC+CGG | + | Chr3:100797608-100797627 | None:intergenic | 50.0% | |
TCTTTGGACATGGTTGCTGG+GGG | - | Chr3:100797447-100797466 | MsG0380017803.01.T01:intron | 50.0% | |
TGATCTGAGGAGTGAGGGTT+GGG | + | Chr3:100796801-100796820 | None:intergenic | 50.0% | |
! | ATGGAAAGCATGTCTTCCGG+AGG | - | Chr3:100796744-100796763 | MsG0380017803.01.T01:CDS | 50.0% |
! | GGTTGATACCAGTTACCCCA+AGG | - | Chr3:100797904-100797923 | MsG0380017803.01.T01:CDS | 50.0% |
!! | TTGGTGTTATGCGGCAAGCA+TGG | - | Chr3:100797652-100797671 | MsG0380017803.01.T01:CDS | 50.0% |
!! | TTTTCGGGAAGTCCTCTCTG+AGG | + | Chr3:100797681-100797700 | None:intergenic | 50.0% |
AATACCTCGTCTCCGGTACG+TGG | - | Chr3:100797593-100797612 | MsG0380017803.01.T01:intron | 55.0% | |
AGGCAGTGATCTGAGGAGTG+AGG | + | Chr3:100796807-100796826 | None:intergenic | 55.0% | |
ATCCTGCAGGCAGTGATCTG+AGG | + | Chr3:100796814-100796833 | None:intergenic | 55.0% | |
CAAGCATGGAGACCTCAGAG+AGG | - | Chr3:100797666-100797685 | MsG0380017803.01.T01:CDS | 55.0% | |
CACTGCCTGCAGGATTCACA+AGG | - | Chr3:100796819-100796838 | MsG0380017803.01.T01:CDS | 55.0% | |
GGCAGTGATCTGAGGAGTGA+GGG | + | Chr3:100796806-100796825 | None:intergenic | 55.0% | |
GGTACGTGGACCAACAGCTT+AGG | - | Chr3:100797607-100797626 | MsG0380017803.01.T01:CDS | 55.0% | |
GTGATCTGAGGAGTGAGGGT+TGG | + | Chr3:100796802-100796821 | None:intergenic | 55.0% | |
CTCCTCAGATCACTGCCTGC+AGG | - | Chr3:100796809-100796828 | MsG0380017803.01.T01:CDS | 60.0% | |
TTGGACATGGTTGCTGGGGG+TGG | - | Chr3:100797450-100797469 | MsG0380017803.01.T01:intron | 60.0% | |
TGGTCCACGTACCGGAGACG+AGG | + | Chr3:100797600-100797619 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 100796369 | 100798976 | 100796369 | ID=MsG0380017803.01;Name=MsG0380017803.01 |
Chr3 | mRNA | 100796369 | 100798976 | 100796369 | ID=MsG0380017803.01.T01;Parent=MsG0380017803.01;Name=MsG0380017803.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0.66|0.75|1|1|1|4|267|549 |
Chr3 | exon | 100796369 | 100797241 | 100796369 | ID=MsG0380017803.01.T01:exon:35887;Parent=MsG0380017803.01.T01 |
Chr3 | exon | 100797369 | 100797429 | 100797369 | ID=MsG0380017803.01.T01:exon:35886;Parent=MsG0380017803.01.T01 |
Chr3 | exon | 100797597 | 100797949 | 100797597 | ID=MsG0380017803.01.T01:exon:35885;Parent=MsG0380017803.01.T01 |
Chr3 | exon | 100798347 | 100798976 | 100798347 | ID=MsG0380017803.01.T01:exon:35884;Parent=MsG0380017803.01.T01 |
Chr3 | CDS | 100798347 | 100798976 | 100798347 | ID=MsG0380017803.01.T01:cds;Parent=MsG0380017803.01.T01 |
Chr3 | CDS | 100797597 | 100797949 | 100797597 | ID=MsG0380017803.01.T01:cds;Parent=MsG0380017803.01.T01 |
Chr3 | CDS | 100797369 | 100797429 | 100797369 | ID=MsG0380017803.01.T01:cds;Parent=MsG0380017803.01.T01 |
Chr3 | CDS | 100796636 | 100797241 | 100796636 | ID=MsG0380017803.01.T01:cds;Parent=MsG0380017803.01.T01 |
Chr3 | three_prime_UTR | 100796369 | 100796635 | 100796369 | ID=MsG0380017803.01.T01:three_prime_utr;Parent=MsG0380017803.01.T01 |
Gene Sequence |
Protein sequence |