AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017839.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017839.01.T01 MTR_3g105990 67.632 380 58 6 446 799 848 1188 9.91e-152 474
MsG0380017839.01.T01 MTR_3g105990 90.270 185 18 0 274 458 520 704 3.95e-105 350
MsG0380017839.01.T01 MTR_3g105990 67.526 194 31 2 121 285 202 392 1.64e-75 267
MsG0380017839.01.T01 MTR_3g105990 76.042 96 19 1 13 108 29 120 1.81e-37 152
MsG0380017839.01.T01 MTR_3g105990 97.561 41 1 0 458 498 783 823 6.68e-16 82.8
MsG0380017839.01.T01 MTR_0189s0050 68.041 194 30 2 121 285 200 390 3.91e-81 270
MsG0380017839.01.T01 MTR_0189s0050 75.926 108 20 2 1 108 17 118 2.11e-44 168
MsG0380017839.01.T01 MTR_1g023500 34.722 360 171 5 461 797 864 1182 4.16e-55 206
MsG0380017839.01.T01 MTR_1g023500 33.659 205 121 4 269 458 504 708 4.55e-22 102
MsG0380017839.01.T01 MTR_8g023445 34.853 307 182 7 495 797 1708 2000 1.15e-37 153
MsG0380017839.01.T01 MTR_8g023445 27.090 299 144 9 271 498 1335 1630 3.11e-15 80.9
MsG0380017839.01.T01 MTR_4g124030 31.250 336 166 7 498 795 871 1179 9.38e-34 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017839.01.T01 AT3G18090 59.829 351 68 7 487 799 740 1055 4.63e-116 377
MsG0380017839.01.T01 AT3G18090 60.000 185 70 2 274 458 392 572 1.66e-56 210
MsG0380017839.01.T01 AT3G18090 44.949 198 74 4 123 290 76 268 4.76e-44 172
MsG0380017839.01.T01 AT3G23780 56.364 385 92 8 452 799 827 1172 4.82e-116 379
MsG0380017839.01.T01 AT3G23780 61.081 185 68 2 274 458 510 690 1.75e-56 211
MsG0380017839.01.T01 AT3G23780 44.444 198 75 4 123 290 194 386 1.54e-43 171
MsG0380017839.01.T01 AT3G23780 59.375 96 36 3 1 94 4 98 1.38e-23 107
MsG0380017839.01.T01 AT3G23780 56.364 385 92 8 452 799 827 1172 4.82e-116 379
MsG0380017839.01.T01 AT3G23780 61.081 185 68 2 274 458 510 690 1.75e-56 211
MsG0380017839.01.T01 AT3G23780 44.444 198 75 4 123 290 194 386 1.54e-43 171
MsG0380017839.01.T01 AT3G23780 59.375 96 36 3 1 94 4 98 1.38e-23 107
MsG0380017839.01.T01 AT3G18090 60.000 185 70 2 274 458 392 572 4.74e-57 211
MsG0380017839.01.T01 AT3G18090 44.949 198 74 4 123 290 76 268 2.94e-44 172
MsG0380017839.01.T01 AT3G18090 55.556 153 33 3 487 604 740 892 1.42e-35 145
MsG0380017839.01.T01 AT3G18090 60.000 185 70 2 274 458 392 572 4.78e-57 211
MsG0380017839.01.T01 AT3G18090 44.949 198 74 4 123 290 76 268 2.75e-44 172
MsG0380017839.01.T01 AT3G18090 56.209 153 32 3 487 604 740 892 2.35e-36 148
MsG0380017839.01.T01 AT4G21710 34.167 360 173 5 461 797 861 1179 6.98e-54 202
MsG0380017839.01.T01 AT4G21710 33.659 205 121 4 269 458 501 705 1.14e-19 95.1
MsG0380017839.01.T01 AT5G45140 35.889 287 157 7 512 790 885 1152 7.98e-39 156
MsG0380017839.01.T01 AT5G45140 30.460 174 108 4 271 433 480 651 2.04e-13 75.1
MsG0380017839.01.T01 AT5G45140 35.889 287 157 7 512 790 885 1152 7.98e-39 156
MsG0380017839.01.T01 AT5G45140 30.460 174 108 4 271 433 480 651 2.04e-13 75.1
MsG0380017839.01.T01 AT1G29940 30.573 314 146 5 527 795 883 1169 3.49e-32 135
MsG0380017839.01.T01 AT5G45140 31.034 174 107 4 271 433 480 651 2.54e-13 74.3

Find 186 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCCGCTCGCTCATATTTA+TGG 0.165120 3:-101247287 MsG0380017839.01.T01:CDS
TGGGGTGTTCAGTATTTATT+TGG 0.178850 3:-101248581 MsG0380017839.01.T01:CDS
GTATGTCTTTCCGAACATTA+AGG 0.230507 3:-101250900 MsG0380017839.01.T01:CDS
CCGAAATCTGAATTCTATAA+TGG 0.244010 3:-101248314 MsG0380017839.01.T01:CDS
TTGAAGTCCTCTTCTTCTTC+AGG 0.252661 3:+101248611 None:intergenic
TGTCTGGTCAGCGGGTGAAC+TGG 0.258911 3:+101247199 None:intergenic
AGTAATCTGCTCAAGATTAA+AGG 0.287112 3:-101248698 MsG0380017839.01.T01:CDS
ATCATGTTCTTCAACGAGTA+TGG 0.290389 3:-101252477 MsG0380017839.01.T01:CDS
GATGATACTACCACTGTTCT+TGG 0.307863 3:-101249550 MsG0380017839.01.T01:CDS
TATAATCAATTCATCACTTC+TGG 0.311232 3:-101252429 MsG0380017839.01.T01:CDS
AAAGACAGAGTCTTCCTAAA+TGG 0.314403 3:-101249523 MsG0380017839.01.T01:CDS
AGAAGTGATGAATTGATTAT+AGG 0.315125 3:+101252431 None:intergenic
TGTTATGCTACGGTTAAGTT+TGG 0.315379 3:-101252321 MsG0380017839.01.T01:CDS
GAGAAGAGAGAAATAACTAT+TGG 0.324145 3:-101251871 MsG0380017839.01.T01:CDS
CAATCACACCACTATGCAAT+AGG 0.327320 3:+101248645 None:intergenic
AAATATTTCTGAAGAGGCTT+TGG 0.330464 3:-101251305 MsG0380017839.01.T01:CDS
CAGGTTAGAAGTCCAGTTCT+TGG 0.334740 3:-101247906 MsG0380017839.01.T01:CDS
CGATTTGGAGGTATCAAGTT+TGG 0.336084 3:-101247157 MsG0380017839.01.T01:CDS
CAAAATGCTTTCAATTCCTT+CGG 0.340906 3:-101252402 MsG0380017839.01.T01:CDS
CCATTATAGAATTCAGATTT+CGG 0.348443 3:+101248314 None:intergenic
GTTCTTCTTCATCGTCGTTT+AGG 0.351195 3:+101252568 None:intergenic
CTGTGGACTAGTAAAGAATT+TGG 0.354479 3:-101249653 MsG0380017839.01.T01:CDS
CAACTCCTAGAAGCTGGTTT+AGG 0.355435 3:-101247737 MsG0380017839.01.T01:intron
ATTGTTGATCTCATCGATTA+TGG 0.358647 3:-101251088 MsG0380017839.01.T01:CDS
AAGTATAGATTCAGTTATAT+TGG 0.360968 3:+101249609 None:intergenic
CTCCAACCCAGTCTCCATTT+AGG 0.365455 3:+101249509 None:intergenic
TATGTCTTTCCGAACATTAA+GGG 0.378939 3:-101250899 MsG0380017839.01.T01:CDS
GTTGCAGGCATCCTTCTCAC+TGG 0.379210 3:-101249714 MsG0380017839.01.T01:intron
TTCAGATTCCGCACCGTTTG+TGG 0.380780 3:-101249482 MsG0380017839.01.T01:CDS
AGATCTGACTTGACCATAAC+AGG 0.384869 3:+101251841 None:intergenic
GTCTGGTCAGCGGGTGAACT+GGG 0.393695 3:+101247200 None:intergenic
TTCCTGTGTTGTTTGATTGT+GGG 0.396216 3:-101249588 MsG0380017839.01.T01:CDS
GTGATCTTGCGACCGGTATC+TGG 0.396475 3:-101247022 MsG0380017839.01.T01:CDS
GCAACTTAAAAGTGAAACTT+TGG 0.396479 3:+101247422 None:intergenic
AATATTTCTGAAGAGGCTTT+GGG 0.397425 3:-101251304 MsG0380017839.01.T01:CDS
TGATTCACAGAATCGGCAAT+AGG 0.399814 3:+101246979 None:intergenic
GTTGCTGACAGGAAGCGATT+TGG 0.400503 3:-101247172 MsG0380017839.01.T01:CDS
ACCCTTCTGTCCGTGCATAC+TGG 0.401250 3:+101247872 None:intergenic
CTGATGCACCATGAGCTATC+AGG 0.402002 3:+101247116 None:intergenic
TTCTGTCGTTGTACTGAGTC+CGG 0.403228 3:-101247395 MsG0380017839.01.T01:CDS
CCTGTCAGCAACAGGCTGTC+TGG 0.404467 3:+101247183 None:intergenic
CGAAATCTGAATTCTATAAT+GGG 0.405897 3:-101248313 MsG0380017839.01.T01:CDS
GACAATAACTTAGCTCCATA+TGG 0.412577 3:+101246929 None:intergenic
AGAGGACTTCAAGACTGCTT+GGG 0.413762 3:-101248600 MsG0380017839.01.T01:CDS
CTTCCTGTGTTGTTTGATTG+TGG 0.413921 3:-101249589 MsG0380017839.01.T01:CDS
GATTCTCCGTCCACTCTTAG+TGG 0.423772 3:-101248723 MsG0380017839.01.T01:CDS
TTTAGGATTTCTGGAGTCTC+AGG 0.424267 3:-101247847 MsG0380017839.01.T01:CDS
ATCCGCTCGCTCATATTTAT+GGG 0.426478 3:-101247286 MsG0380017839.01.T01:CDS
ATTGATTATAGGAATTGATT+TGG 0.427735 3:+101252442 None:intergenic
AATCGCTTCCTGTCAGCAAC+AGG 0.434054 3:+101247175 None:intergenic
GCATCCTTCTCACTGGGGTA+AGG 0.434903 3:-101249707 MsG0380017839.01.T01:CDS
AAATGTATCACATTTGTTGT+CGG 0.435955 3:+101251015 None:intergenic
AGAAGAGAGAAATAACTATT+GGG 0.440381 3:-101251870 MsG0380017839.01.T01:CDS
TGCTGTTGTTTCGTTAAGAC+AGG 0.445226 3:-101248019 MsG0380017839.01.T01:intron
GTCATGTACGGAACATAAAC+CGG 0.446916 3:+101247376 None:intergenic
CAACAGGCTGTCTGGTCAGC+GGG 0.448282 3:+101247191 None:intergenic
CAGTATTTATTTGGAAAAGA+GGG 0.455985 3:-101248572 MsG0380017839.01.T01:CDS
TTGAGGATTTCAGCATTTGA+TGG 0.456386 3:+101252546 None:intergenic
TATTGGGAGACTGCCTGTTA+TGG 0.459953 3:-101251854 MsG0380017839.01.T01:CDS
GGGTTTCAAATATTCCGTAT+TGG 0.461002 3:-101251284 MsG0380017839.01.T01:CDS
TCGGAAAGACATACAAGTTA+AGG 0.463583 3:+101250909 None:intergenic
CAGAGGACAAAGTAAAGTTC+AGG 0.464997 3:-101247231 MsG0380017839.01.T01:CDS
GTCTGTGATGGCTTCGACAG+AGG 0.466559 3:+101247661 None:intergenic
TCAGTATTTATTTGGAAAAG+AGG 0.468211 3:-101248573 MsG0380017839.01.T01:CDS
AAGAGGACTTCAAGACTGCT+TGG 0.469345 3:-101248601 MsG0380017839.01.T01:CDS
GGAAAGGGTATTGCTTGTGT+TGG 0.470948 3:-101247716 MsG0380017839.01.T01:CDS
TGTTTCCTCTCTACCCCAGT+TGG 0.472232 3:-101249682 MsG0380017839.01.T01:CDS
TGGAGGCTACTTTCTGATCA+AGG 0.472269 3:-101251774 MsG0380017839.01.T01:CDS
GAGTCTTCCTAAATGGAGAC+TGG 0.475484 3:-101249516 MsG0380017839.01.T01:CDS
GAGAACTTATCTCCAAGAAC+TGG 0.476721 3:+101247894 None:intergenic
CTAGAAGCTGGTTTAGGAAA+GGG 0.480354 3:-101247731 MsG0380017839.01.T01:intron
TGGAGCTAAGTTATTGTCTC+AGG 0.481907 3:-101246924 MsG0380017839.01.T01:CDS
TTGCAGGCATCCTTCTCACT+GGG 0.483891 3:-101249713 MsG0380017839.01.T01:intron
TGCAGTCGCTGGTAGAATGT+AGG 0.485356 3:+101247262 None:intergenic
GATTCACAGAATCGGCAATA+GGG 0.488578 3:+101246980 None:intergenic
CCATCACAGACCAGCTTCAC+AGG 0.491566 3:-101247649 MsG0380017839.01.T01:intron
GTTCTTCCCCTCATCATTCG+AGG 0.493164 3:+101248044 None:intergenic
AACAATCTCTTTATCTGAAG+TGG 0.493680 3:+101251105 None:intergenic
AAGAGCAAATATTTCTGAAG+AGG 0.499789 3:-101251311 MsG0380017839.01.T01:CDS
AAGGCTAAAACACACTGAAA+GGG 0.502460 3:-101248091 MsG0380017839.01.T01:CDS
GATGGCTTCGACAGAGGAAG+TGG 0.504155 3:+101247667 None:intergenic
TTTGTTGTCGGCTTCACGAA+TGG 0.506428 3:+101251027 None:intergenic
AGGTATCAAGTTTGGTGAGA+TGG 0.508789 3:-101247149 MsG0380017839.01.T01:CDS
CTGACATGTGGTGCAGTCGC+TGG 0.510733 3:+101247251 None:intergenic
CATCGGCTGATTCACAGAAT+CGG 0.512308 3:+101246972 None:intergenic
CAAATGTGATACATTTCGTA+GGG 0.514699 3:-101251008 MsG0380017839.01.T01:CDS
TGAAAGGGGACATGTTCAAA+AGG 0.515382 3:-101248076 MsG0380017839.01.T01:CDS
CTCCAGTATGCACGGACAGA+AGG 0.516490 3:-101247874 MsG0380017839.01.T01:CDS
GTAAAGAATTTGGCTGTCGC+AGG 0.518111 3:-101249643 MsG0380017839.01.T01:CDS
TTTCTTAGAGGAACGTGTCA+AGG 0.521437 3:-101250969 MsG0380017839.01.T01:CDS
TCGACAGAGGAAGTGGAGAA+AGG 0.523269 3:+101247674 None:intergenic
GCAGTCGCTGGTAGAATGTA+GGG 0.524612 3:+101247263 None:intergenic
AATCACACCACTATGCAATA+GGG 0.524634 3:+101248646 None:intergenic
TTCTTAGAAGGGTCAAAACC+AGG 0.529406 3:+101252363 None:intergenic
GTCTCAGGAGCTGTTCAGCA+TGG 0.529733 3:-101246909 MsG0380017839.01.T01:CDS
ATCGATTATGGAGAGGGAGA+TGG 0.529999 3:-101251076 MsG0380017839.01.T01:CDS
ATATAATCAAGAAGATTCCT+TGG 0.530675 3:-101248255 MsG0380017839.01.T01:CDS
AGTGGTGTGATTGAGCTGAT+TGG 0.532155 3:-101248635 MsG0380017839.01.T01:CDS
GGGTGCTGACTCTGCTGAGA+AGG 0.534225 3:-101251753 MsG0380017839.01.T01:intron
CGAGTATACAATGGGAGGAC+TGG 0.535544 3:-101247323 MsG0380017839.01.T01:CDS
TGTTCCGTACATGACAGAGC+TGG 0.536804 3:-101247368 MsG0380017839.01.T01:CDS
CAACGAGCTAGGTGAATACA+TGG 0.537246 3:-101252526 MsG0380017839.01.T01:CDS
TTTCGGTCCCTATTGCATAG+TGG 0.539478 3:-101248653 MsG0380017839.01.T01:CDS
CCAGACAGCCTGTTGCTGAC+AGG 0.540994 3:-101247183 MsG0380017839.01.T01:CDS
GCTGAAATCCTCAACGAGCT+AGG 0.541500 3:-101252537 MsG0380017839.01.T01:CDS
CTCAGTACAACGACAGAACA+TGG 0.545509 3:+101247400 None:intergenic
TTGTATGCAACTGTCCAATA+CGG 0.546380 3:+101251270 None:intergenic
CAAGGCTAAAACACACTGAA+AGG 0.546391 3:-101248092 MsG0380017839.01.T01:CDS
GCTGACAGGAAGCGATTTGG+AGG 0.548407 3:-101247169 MsG0380017839.01.T01:CDS
CCTGTGAAGCTGGTCTGTGA+TGG 0.549914 3:+101247649 None:intergenic
GAAAAGAACGAGTATACAAT+GGG 0.550304 3:-101247331 MsG0380017839.01.T01:CDS
TTCCTAAATGGAGACTGGGT+TGG 0.557268 3:-101249511 MsG0380017839.01.T01:CDS
TTTCGTAGCTCTGCCACAAA+CGG 0.557609 3:+101249469 None:intergenic
GGAAAGCTTACAGTTACGCC+TGG 0.558089 3:-101252381 MsG0380017839.01.T01:CDS
GTGGCTGTCAATGTGCATCT+TGG 0.559074 3:-101248278 MsG0380017839.01.T01:CDS
ACAAATGTGATACATTTCGT+AGG 0.562166 3:-101251009 MsG0380017839.01.T01:CDS
GATTGGTCCTGAAGAAGAAG+AGG 0.564149 3:-101248618 MsG0380017839.01.T01:CDS
CCTAGAAGCTGGTTTAGGAA+AGG 0.564187 3:-101247732 MsG0380017839.01.T01:intron
GCACTCGTCAATAGATTCTG+AGG 0.566118 3:+101250931 None:intergenic
GCAACAGGCTGTCTGGTCAG+CGG 0.568700 3:+101247190 None:intergenic
TATTGATAGAGAGATAATCA+TGG 0.569266 3:-101251896 MsG0380017839.01.T01:intron
TGTGTTGTTTGATTGTGGGA+TGG 0.570431 3:-101249584 MsG0380017839.01.T01:CDS
TTTATCTGAAGTGGCACCAA+GGG 0.573601 3:+101251114 None:intergenic
GATCTCATCGATTATGGAGA+GGG 0.573846 3:-101251082 MsG0380017839.01.T01:CDS
TGATCAGAAAGTAGCCTCCA+TGG 0.575549 3:+101251777 None:intergenic
GCATAAAATAGTATCCATAC+CGG 0.577092 3:+101251136 None:intergenic
TTCTTAGAGGAACGTGTCAA+GGG 0.577874 3:-101250968 MsG0380017839.01.T01:CDS
GGAGGCTACTTTCTGATCAA+GGG 0.578986 3:-101251773 MsG0380017839.01.T01:CDS
TGAACATTACTGTTATGCTA+CGG 0.579819 3:-101252331 MsG0380017839.01.T01:CDS
ACTCGCCACCACAATGTCAT+CGG 0.580272 3:+101246955 None:intergenic
GTATCTGAGACGAATCACTC+AGG 0.581128 3:+101247068 None:intergenic
TCTCAGGAGCTGTTCAGCAT+GGG 0.581208 3:-101246908 MsG0380017839.01.T01:CDS
TTTCACCAACTGGGGTAGAG+AGG 0.581252 3:+101249677 None:intergenic
TTTGGAAAGACAGAGCATCA+AGG 0.581336 3:-101248110 MsG0380017839.01.T01:intron
GAAGAGGCGCTCATACAAGT+TGG 0.582334 3:+101247093 None:intergenic
ACAATGGGAGGACTGGTGAC+TGG 0.582598 3:-101247316 MsG0380017839.01.T01:CDS
ACGAATCACTCAGGGTGAAG+AGG 0.588585 3:+101247077 None:intergenic
TGAAACATTACCTGTGAAGC+TGG 0.590142 3:+101247639 None:intergenic
AAATCCAGCTCTGTCATGTA+CGG 0.590265 3:+101247364 None:intergenic
TTACTTTGTCCTCTGACATG+TGG 0.592096 3:+101247239 None:intergenic
GTGCTGTCCTCGAATGATGA+GGG 0.595657 3:-101248051 MsG0380017839.01.T01:CDS
TACTAACCACTAAGAGTGGA+CGG 0.596131 3:+101248717 None:intergenic
GAGGACTTCAAGACTGCTTG+GGG 0.598252 3:-101248599 MsG0380017839.01.T01:CDS
GAATAAAAGTGAACCTGATG+AGG 0.601964 3:+101249424 None:intergenic
TCCAGTATGCACGGACAGAA+GGG 0.602180 3:-101247873 MsG0380017839.01.T01:CDS
AAAGTAAAGTTCAGGAACAC+TGG 0.602555 3:-101247223 MsG0380017839.01.T01:CDS
CTTTATCTGAAGTGGCACCA+AGG 0.604944 3:+101251113 None:intergenic
AGTGATTGTGAATTTGGCCA+TGG 0.605079 3:-101251794 MsG0380017839.01.T01:CDS
TGTCTGTTGAGATTCCGGTA+TGG 0.606023 3:-101251150 MsG0380017839.01.T01:CDS
AGGCTAAAACACACTGAAAG+GGG 0.606832 3:-101248090 MsG0380017839.01.T01:CDS
GGAAAAGAACGAGTATACAA+TGG 0.609358 3:-101247332 MsG0380017839.01.T01:CDS
TGCAAATGTGATCTTGCGAC+CGG 0.612849 3:-101247029 MsG0380017839.01.T01:CDS
CGTGATTGCCTGATAGCTCA+TGG 0.615327 3:-101247124 MsG0380017839.01.T01:CDS
GCATATTATCTGACGCAGGA+AGG 0.620184 3:-101248745 MsG0380017839.01.T01:CDS
TGTATTCACCTAGCTCGTTG+AGG 0.623012 3:+101252529 None:intergenic
CAAACCTTACCCCAGTGAGA+AGG 0.623788 3:+101249703 None:intergenic
GATAAGTTCTCCAGTATGCA+CGG 0.624516 3:-101247882 MsG0380017839.01.T01:CDS
GTGGTGGCGAGTGTTCCATA+TGG 0.630246 3:-101246944 MsG0380017839.01.T01:CDS
TAATGGGCAGAATGCAATTG+TGG 0.631335 3:-101248297 MsG0380017839.01.T01:CDS
CGTAACTGTAAGCTTTCCGA+AGG 0.633056 3:+101252386 None:intergenic
CACTCGTCAATAGATTCTGA+GGG 0.638441 3:+101250932 None:intergenic
CAGAGCTACGAAATAGAAGA+CGG 0.643146 3:-101249459 MsG0380017839.01.T01:CDS
TGATCTCATCGATTATGGAG+AGG 0.644956 3:-101251083 MsG0380017839.01.T01:CDS
GGCCCATAAATATGAGCGAG+CGG 0.645270 3:+101247284 None:intergenic
ATACTCGTTGAAGAACATGA+TGG 0.645937 3:+101252479 None:intergenic
AGTCTTCCTAAATGGAGACT+GGG 0.646042 3:-101249515 MsG0380017839.01.T01:CDS
TGTGCTGTCCTCGAATGATG+AGG 0.647960 3:-101248052 MsG0380017839.01.T01:CDS
GCGACTGCACCACATGTCAG+AGG 0.652993 3:-101247248 MsG0380017839.01.T01:CDS
AGATTACTAACCACTAAGAG+TGG 0.653431 3:+101248713 None:intergenic
TGAATCAGCCGATGACATTG+TGG 0.662510 3:-101246963 MsG0380017839.01.T01:CDS
TGATAGAGAGATAATCATGG+AGG 0.662881 3:-101251893 MsG0380017839.01.T01:intron
ACCCCAGTTGGTGAAAACTG+TGG 0.664223 3:-101249670 MsG0380017839.01.T01:CDS
AAGAACGAGTATACAATGGG+AGG 0.664562 3:-101247328 MsG0380017839.01.T01:CDS
AACTGCGCTTCTTTGCAGCG+TGG 0.666059 3:-101248227 MsG0380017839.01.T01:intron
TATCTGAGACGAATCACTCA+GGG 0.666324 3:+101247069 None:intergenic
ATCCCACAATCAAACAACAC+AGG 0.669218 3:+101249586 None:intergenic
ATGCGCATATTATCTGACGC+AGG 0.670598 3:-101248749 MsG0380017839.01.T01:CDS
TGCTGTCCTCGAATGATGAG+GGG 0.676097 3:-101248050 MsG0380017839.01.T01:CDS
TCGTCAATAGATTCTGAGGG+CGG 0.676515 3:+101250935 None:intergenic
TGCAGGCATCCTTCTCACTG+GGG 0.689696 3:-101249712 MsG0380017839.01.T01:intron
AGAAGCGCAGTTCATCACCA+AGG 0.699703 3:+101248238 None:intergenic
ATCAGCCGATGACATTGTGG+TGG 0.700098 3:-101246960 MsG0380017839.01.T01:CDS
TAGCTCTGCCACAAACGGTG+CGG 0.701175 3:+101249474 None:intergenic
AAATGTGATACATTTCGTAG+GGG 0.702228 3:-101251007 MsG0380017839.01.T01:CDS
ATCTTGCGACCGGTATCTGG+TGG 0.711553 3:-101247019 MsG0380017839.01.T01:CDS
GATTGTGAATTTGGCCATGG+AGG 0.722109 3:-101251791 MsG0380017839.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTCTAACATATAATTAAA+TGG - Chr3:101250285-101250304 MsG0380017839.01.T01:intron 15.0%
!! GAAATACTAAATAAATATTG+TGG - Chr3:101250560-101250579 MsG0380017839.01.T01:intron 15.0%
!! GTTAGTATTCATAATAATTA+AGG - Chr3:101247279-101247298 MsG0380017839.01.T01:CDS 15.0%
!!! TGTATTTTATGTTATTTTAG+AGG - Chr3:101251874-101251893 MsG0380017839.01.T01:CDS 15.0%
!! AAGTATAGATTCAGTTATAT+TGG + Chr3:101249847-101249866 None:intergenic 20.0%
!! AAGTTTAACAAAATTTATGC+AGG + Chr3:101247837-101247856 None:intergenic 20.0%
!! AAGTTTCAAAACTAAAATGT+TGG + Chr3:101250468-101250487 None:intergenic 20.0%
!! AGTTTAACAAAATTTATGCA+GGG + Chr3:101247836-101247855 None:intergenic 20.0%
!! ATTGATTATAGGAATTGATT+TGG + Chr3:101247014-101247033 None:intergenic 20.0%
!! ATTTGAGTAAAATTTATCCA+CGG - Chr3:101247926-101247945 MsG0380017839.01.T01:intron 20.0%
!! CTACATATTTATACATCTTA+TGG - Chr3:101247767-101247786 MsG0380017839.01.T01:intron 20.0%
!! TATATTGAGTCCAAAAAAAA+AGG + Chr3:101249152-101249171 None:intergenic 20.0%
!!! AAAGTTTTCATATTTCTATG+TGG - Chr3:101247256-101247275 MsG0380017839.01.T01:CDS 20.0%
!!! AACTAATGATCCTTTTTTTT+TGG - Chr3:101249139-101249158 MsG0380017839.01.T01:intron 20.0%
!!! AAGCTTTTAATAATTTTTGC+AGG - Chr3:101251528-101251547 MsG0380017839.01.T01:intron 20.0%
!!! AAGTTTTCATATTTCTATGT+GGG - Chr3:101247257-101247276 MsG0380017839.01.T01:CDS 20.0%
!!! AATGCTTTCATTCATTTTAA+TGG - Chr3:101249707-101249726 MsG0380017839.01.T01:CDS 20.0%
!!! ATTGTGTATTTTTGAAATGT+GGG - Chr3:101247398-101247417 MsG0380017839.01.T01:CDS 20.0%
!!! ATTTTATGTTATTTTAGAGG+AGG - Chr3:101251877-101251896 MsG0380017839.01.T01:CDS 20.0%
!!! CAATTAATTTTTCACTTAGT+TGG - Chr3:101250606-101250625 MsG0380017839.01.T01:intron 20.0%
!!! TATTGTGTATTTTTGAAATG+TGG - Chr3:101247397-101247416 MsG0380017839.01.T01:CDS 20.0%
!!! TTAGTAAGTTCTGATTAAAA+TGG - Chr3:101249428-101249447 MsG0380017839.01.T01:intron 20.0%
!!! TTTACATGTTTAAGTTGTTT+AGG + Chr3:101249184-101249203 None:intergenic 20.0%
!!! TTTTTAATCCCTACAAAAAT+GGG + Chr3:101247968-101247987 None:intergenic 20.0%
! AAATAGGATGGTTGTTAAAT+TGG - Chr3:101248221-101248240 MsG0380017839.01.T01:intron 25.0%
! AACAAAAGCAATTTACAAAC+AGG + Chr3:101248105-101248124 None:intergenic 25.0%
! AAGTAACCTAAACTGTATTA+AGG + Chr3:101251855-101251874 None:intergenic 25.0%
! AGAAGAGAGAAATAACTATT+GGG - Chr3:101247583-101247602 MsG0380017839.01.T01:intron 25.0%
! AGAAGTGATGAATTGATTAT+AGG + Chr3:101247025-101247044 None:intergenic 25.0%
! ATATAATCAAGAAGATTCCT+TGG - Chr3:101251198-101251217 MsG0380017839.01.T01:intron 25.0%
! ATTGATCAAATACAACATAG+TGG + Chr3:101251503-101251522 None:intergenic 25.0%
! CAAAGCTGAAATTGAAAATA+AGG - Chr3:101251279-101251298 MsG0380017839.01.T01:CDS 25.0%
! CAGTATTTATTTGGAAAAGA+GGG - Chr3:101250881-101250900 MsG0380017839.01.T01:CDS 25.0%
! CATTAAGGGATTAAAAAGAA+AGG - Chr3:101248568-101248587 MsG0380017839.01.T01:CDS 25.0%
! CCATTATAGAATTCAGATTT+CGG + Chr3:101251142-101251161 None:intergenic 25.0%
! CGAAATCTGAATTCTATAAT+GGG - Chr3:101251140-101251159 MsG0380017839.01.T01:CDS 25.0%
! GAAAAAAGTGATTGTGAATT+TGG - Chr3:101247653-101247672 MsG0380017839.01.T01:CDS 25.0%
! GGATCATTAGTTATAAGATT+TGG + Chr3:101249131-101249150 None:intergenic 25.0%
! TATAATCAATTCATCACTTC+TGG - Chr3:101247024-101247043 MsG0380017839.01.T01:CDS 25.0%
! TATTGATAGAGAGATAATCA+TGG - Chr3:101247557-101247576 MsG0380017839.01.T01:intron 25.0%
! TCAGTATTTATTTGGAAAAG+AGG - Chr3:101250880-101250899 MsG0380017839.01.T01:intron 25.0%
! TTAGTTCCTAATGCAAAATA+GGG + Chr3:101247864-101247883 None:intergenic 25.0%
! TTGATATGTTGTTCTTATCT+AGG - Chr3:101250936-101250955 MsG0380017839.01.T01:CDS 25.0%
!! AAGTTCTGATTAAAATGGTT+GGG - Chr3:101249433-101249452 MsG0380017839.01.T01:intron 25.0%
!! AATTTTCCTTTCACAAAACA+AGG - Chr3:101251631-101251650 MsG0380017839.01.T01:intron 25.0%
!! CTTTTTAATCCCTTAATGTT+CGG + Chr3:101248566-101248585 None:intergenic 25.0%
!! GTTTTTAATCCCTACAAAAA+TGG + Chr3:101247969-101247988 None:intergenic 25.0%
!! TAAGTTCTGATTAAAATGGT+TGG - Chr3:101249432-101249451 MsG0380017839.01.T01:intron 25.0%
!! TTTAGTTCCTAATGCAAAAT+AGG + Chr3:101247865-101247884 None:intergenic 25.0%
!!! AAATGTATCACATTTGTTGT+CGG + Chr3:101248441-101248460 None:intergenic 25.0%
!!! AAGTACTCATTTTTTGTATG+AGG - Chr3:101247884-101247903 MsG0380017839.01.T01:CDS 25.0%
!!! ATTTTTAATTCCTTCAATGC+TGG + Chr3:101248256-101248275 None:intergenic 25.0%
!!! TACAAAATCCCATTTTTGTA+GGG - Chr3:101247957-101247976 MsG0380017839.01.T01:intron 25.0%
!!! TTACAAAATCCCATTTTTGT+AGG - Chr3:101247956-101247975 MsG0380017839.01.T01:intron 25.0%
!!! TTCATTTTAATGGAAGTTTG+TGG - Chr3:101249717-101249736 MsG0380017839.01.T01:intron 25.0%
AAATAGACATGGTTAACACT+AGG + Chr3:101250649-101250668 None:intergenic 30.0%
AAATGTGATACATTTCGTAG+GGG - Chr3:101248446-101248465 MsG0380017839.01.T01:intron 30.0%
AACAATCTCTTTATCTGAAG+TGG + Chr3:101248351-101248370 None:intergenic 30.0%
AACTGTAGAAAGACTAAACT+AGG + Chr3:101249032-101249051 None:intergenic 30.0%
AATAGACATGGTTAACACTA+GGG + Chr3:101250648-101250667 None:intergenic 30.0%
ACAAATGTGATACATTTCGT+AGG - Chr3:101248444-101248463 MsG0380017839.01.T01:intron 30.0%
AGAAATAGAGAACAACTGAA+AGG - Chr3:101250524-101250543 MsG0380017839.01.T01:intron 30.0%
AGAATCCCTATAGTAGAAAA+AGG - Chr3:101250107-101250126 MsG0380017839.01.T01:intron 30.0%
AGCTGATACTGAAAATGAAA+TGG + Chr3:101249369-101249388 None:intergenic 30.0%
AGCTTACCTTAATACAGTTT+AGG - Chr3:101251846-101251865 MsG0380017839.01.T01:CDS 30.0%
AGTAATCTGCTCAAGATTAA+AGG - Chr3:101250755-101250774 MsG0380017839.01.T01:intron 30.0%
AGTGTTAACCATGTCTATTT+AGG - Chr3:101250649-101250668 MsG0380017839.01.T01:intron 30.0%
CAAAAAAAGGATCTACAACT+AGG + Chr3:101251972-101251991 None:intergenic 30.0%
CAAAATGCTTTCAATTCCTT+CGG - Chr3:101247051-101247070 MsG0380017839.01.T01:CDS 30.0%
CAAATGTGATACATTTCGTA+GGG - Chr3:101248445-101248464 MsG0380017839.01.T01:intron 30.0%
CCAAAATTAACAATGTCTTC+AGG + Chr3:101251328-101251347 None:intergenic 30.0%
CCGAAATCTGAATTCTATAA+TGG - Chr3:101251139-101251158 MsG0380017839.01.T01:CDS 30.0%
CTGAGGATAAAATAATTGGT+GGG + Chr3:101251047-101251066 None:intergenic 30.0%
GAAAAGAACGAGTATACAAT+GGG - Chr3:101252122-101252141 MsG0380017839.01.T01:intron 30.0%
GAAATAGAGAACAACTGAAA+GGG - Chr3:101250525-101250544 MsG0380017839.01.T01:intron 30.0%
GAGAAGAGAGAAATAACTAT+TGG - Chr3:101247582-101247601 MsG0380017839.01.T01:intron 30.0%
GATGCTTCCATTATTACAAA+TGG - Chr3:101248814-101248833 MsG0380017839.01.T01:intron 30.0%
GCAACTTAAAAGTGAAACTT+TGG + Chr3:101252034-101252053 None:intergenic 30.0%
GCATAAAATAGTATCCATAC+CGG + Chr3:101248320-101248339 None:intergenic 30.0%
TAAGAGAGATAGAGATAAAC+AGG - Chr3:101247442-101247461 MsG0380017839.01.T01:CDS 30.0%
TACAACTAGGAAGACAATAT+TGG + Chr3:101251959-101251978 None:intergenic 30.0%
TAGTCCTATACAATTGACAT+CGG - Chr3:101247803-101247822 MsG0380017839.01.T01:intron 30.0%
TATGTCTTTCCGAACATTAA+GGG - Chr3:101248554-101248573 MsG0380017839.01.T01:CDS 30.0%
TCCTAAAATTAAAGTGAGTC+TGG + Chr3:101252003-101252022 None:intergenic 30.0%
TCTGAGGATAAAATAATTGG+TGG + Chr3:101251048-101251067 None:intergenic 30.0%
TGAACATTACTGTTATGCTA+CGG - Chr3:101247122-101247141 MsG0380017839.01.T01:CDS 30.0%
TGATGATAGCAATATTCCAA+GGG + Chr3:101249215-101249234 None:intergenic 30.0%
TGTTTATCTCTATCTCTCTT+AGG + Chr3:101247443-101247462 None:intergenic 30.0%
TTAACCGATGTCAATTGTAT+AGG + Chr3:101247810-101247829 None:intergenic 30.0%
TTGGAGACCATTTGTAATAA+TGG + Chr3:101248824-101248843 None:intergenic 30.0%
! AAATATTTCTGAAGAGGCTT+TGG - Chr3:101248148-101248167 MsG0380017839.01.T01:intron 30.0%
! AAGAGCAAATATTTCTGAAG+AGG - Chr3:101248142-101248161 MsG0380017839.01.T01:intron 30.0%
! AATATTTCTGAAGAGGCTTT+GGG - Chr3:101248149-101248168 MsG0380017839.01.T01:intron 30.0%
! AGTCAGAGCATAAATCTTTT+CGG - Chr3:101250783-101250802 MsG0380017839.01.T01:intron 30.0%
! ATCCTTTCCATCCTTTTAAA+AGG + Chr3:101248877-101248896 None:intergenic 30.0%
! ATTGTTGATCTCATCGATTA+TGG - Chr3:101248365-101248384 MsG0380017839.01.T01:intron 30.0%
! CATTTTCTCCTTTCTTAGAA+GGG + Chr3:101247104-101247123 None:intergenic 30.0%
! CCTGAAGACATTGTTAATTT+TGG - Chr3:101251325-101251344 MsG0380017839.01.T01:CDS 30.0%
! CGTTGTATGCTATTAATTTG+AGG - Chr3:101250134-101250153 MsG0380017839.01.T01:intron 30.0%
! GACAACCTTTTTCTACTATA+GGG + Chr3:101250115-101250134 None:intergenic 30.0%
! GATTTTGTAAGTTTAATCCG+TGG + Chr3:101247946-101247965 None:intergenic 30.0%
! GTCTCTGAGGATAAAATAAT+TGG + Chr3:101251051-101251070 None:intergenic 30.0%
! TAAATTTAAGACAGGAAGAG+AGG - Chr3:101247530-101247549 MsG0380017839.01.T01:intron 30.0%
! TAGTCTTTCTACAGTTTTTG+TGG - Chr3:101249036-101249055 MsG0380017839.01.T01:intron 30.0%
! TCATTTTCTCCTTTCTTAGA+AGG + Chr3:101247105-101247124 None:intergenic 30.0%
! TTGATGATAGCAATATTCCA+AGG + Chr3:101249216-101249235 None:intergenic 30.0%
! TTTAGTCCCTATTTTGCATT+AGG - Chr3:101247855-101247874 MsG0380017839.01.T01:CDS 30.0%
!! AAAGCATCGACTCTTAAATT+TGG + Chr3:101251022-101251041 None:intergenic 30.0%
!! AAGCATCGACTCTTAAATTT+GGG + Chr3:101251021-101251040 None:intergenic 30.0%
!! ATCCTTTTAAAAGGATGGAA+AGG - Chr3:101248872-101248891 MsG0380017839.01.T01:intron 30.0%
!! TCCAGACTCACTTTAATTTT+AGG - Chr3:101251999-101252018 MsG0380017839.01.T01:intron 30.0%
!! TGTATGGTCTTTAAAACTCA+TGG - Chr3:101249265-101249284 MsG0380017839.01.T01:intron 30.0%
!! TTGTTCTCTATTTCTACAGA+AGG + Chr3:101250519-101250538 None:intergenic 30.0%
!!! ACAATACCTTGTTTTGTGAA+AGG + Chr3:101251640-101251659 None:intergenic 30.0%
!!! AGTTTTAAAGACCATACAGA+CGG + Chr3:101249263-101249282 None:intergenic 30.0%
!!! TTTTTTGTCTGTTGAGATTC+CGG - Chr3:101248298-101248317 MsG0380017839.01.T01:CDS 30.0%
AAAAGGATGGAAAGGATTTC+TGG - Chr3:101248880-101248899 MsG0380017839.01.T01:intron 35.0%
AAACATCTCAATCTCCATAG+AGG + Chr3:101248774-101248793 None:intergenic 35.0%
AAAGACAGAGTCTTCCTAAA+TGG - Chr3:101249930-101249949 MsG0380017839.01.T01:intron 35.0%
AAAGTAAAGTTCAGGAACAC+TGG - Chr3:101252230-101252249 MsG0380017839.01.T01:intron 35.0%
AAATCAATCCCTGTAAAGGT+TGG + Chr3:101249528-101249547 None:intergenic 35.0%
AACCAAATCAATCCCTGTAA+AGG + Chr3:101249532-101249551 None:intergenic 35.0%
AACCTTTACAGGGATTGATT+TGG - Chr3:101249527-101249546 MsG0380017839.01.T01:CDS 35.0%
AACTAATCCTTTGCAAACCA+TGG - Chr3:101248924-101248943 MsG0380017839.01.T01:intron 35.0%
AAGGCTAAAACACACTGAAA+GGG - Chr3:101251362-101251381 MsG0380017839.01.T01:intron 35.0%
AATCAATCCCTGTAAAGGTT+GGG + Chr3:101249527-101249546 None:intergenic 35.0%
AATCACACCACTATGCAATA+GGG + Chr3:101250810-101250829 None:intergenic 35.0%
ACAACAACATCTGATTGTCT+TGG - Chr3:101251082-101251101 MsG0380017839.01.T01:CDS 35.0%
ACAGATGAAGAGAAATAGGA+TGG - Chr3:101248209-101248228 MsG0380017839.01.T01:intron 35.0%
AGATTACTAACCACTAAGAG+TGG + Chr3:101250743-101250762 None:intergenic 35.0%
AGGGATGACTTTCAAAATAG+AGG - Chr3:101248659-101248678 MsG0380017839.01.T01:CDS 35.0%
AGGGATTAAAAAGAAAGGCA+CGG - Chr3:101248573-101248592 MsG0380017839.01.T01:CDS 35.0%
AGTGACAGATGAAGAGAAAT+AGG - Chr3:101248205-101248224 MsG0380017839.01.T01:intron 35.0%
ATACTCGTTGAAGAACATGA+TGG + Chr3:101246977-101246996 None:intergenic 35.0%
ATAGACATGGTTAACACTAG+GGG + Chr3:101250647-101250666 None:intergenic 35.0%
ATCATGTTCTTCAACGAGTA+TGG - Chr3:101246976-101246995 MsG0380017839.01.T01:CDS 35.0%
ATCTCTTCATTAGTCATGAC+TGG - Chr3:101249480-101249499 MsG0380017839.01.T01:CDS 35.0%
GAAAAATGAATTGCCTCATC+AGG - Chr3:101250016-101250035 MsG0380017839.01.T01:intron 35.0%
GAATAAAAGTGAACCTGATG+AGG + Chr3:101250032-101250051 None:intergenic 35.0%
GACAATAACTTAGCTCCATA+TGG + Chr3:101252527-101252546 None:intergenic 35.0%
GAGATAGAGATAAACAGGTA+TGG - Chr3:101247447-101247466 MsG0380017839.01.T01:CDS 35.0%
GATAGTCACACCAAAAAACT+CGG + Chr3:101249336-101249355 None:intergenic 35.0%
GATGATAGCAATATTCCAAG+GGG + Chr3:101249214-101249233 None:intergenic 35.0%
GATTTCCACCTAAATAGACA+TGG + Chr3:101250660-101250679 None:intergenic 35.0%
GGAAAAGAACGAGTATACAA+TGG - Chr3:101252121-101252140 MsG0380017839.01.T01:intron 35.0%
GGGTTTCAAATATTCCGTAT+TGG - Chr3:101248169-101248188 MsG0380017839.01.T01:intron 35.0%
GTATGTCTTTCCGAACATTA+AGG - Chr3:101248553-101248572 MsG0380017839.01.T01:CDS 35.0%
GTTAACCATGTCTATTTAGG+TGG - Chr3:101250652-101250671 MsG0380017839.01.T01:intron 35.0%
TAGGATGGTTGTTAAATTGG+TGG - Chr3:101248224-101248243 MsG0380017839.01.T01:intron 35.0%
TATAAGTCCCAACCTTTACA+GGG - Chr3:101249517-101249536 MsG0380017839.01.T01:CDS 35.0%
TATACTTGTTCTCCAGTGAA+GGG - Chr3:101249580-101249599 MsG0380017839.01.T01:CDS 35.0%
TCGGAAAGACATACAAGTTA+AGG + Chr3:101248547-101248566 None:intergenic 35.0%
TGATAGAGAGATAATCATGG+AGG - Chr3:101247560-101247579 MsG0380017839.01.T01:intron 35.0%
TGCGGATTTATGACAATATC+CGG + Chr3:101251664-101251683 None:intergenic 35.0%
TGGCTGAATTAAGAAGAACA+AGG - Chr3:101248944-101248963 MsG0380017839.01.T01:intron 35.0%
TGTTATGCTACGGTTAAGTT+TGG - Chr3:101247132-101247151 MsG0380017839.01.T01:CDS 35.0%
TGTTCTTCTTAATTCAGCCA+TGG + Chr3:101248944-101248963 None:intergenic 35.0%
TTACTTTGACCTAGTAATCC+AGG + Chr3:101251112-101251131 None:intergenic 35.0%
TTATAAGTCCCAACCTTTAC+AGG - Chr3:101249516-101249535 MsG0380017839.01.T01:CDS 35.0%
TTATACTGGACGCCAAAAAA+CGG - Chr3:101248631-101248650 MsG0380017839.01.T01:CDS 35.0%
TTGAGGATTTCAGCATTTGA+TGG + Chr3:101246910-101246929 None:intergenic 35.0%
TTGTATGCAACTGTCCAATA+CGG + Chr3:101248186-101248205 None:intergenic 35.0%
! ATTTGAAACTGAGCTTTGCT+AGG - Chr3:101252580-101252599 MsG0380017839.01.T01:CDS 35.0%
! CATGGACACATCCTTTTAAA+AGG - Chr3:101248863-101248882 MsG0380017839.01.T01:intron 35.0%
! CGACAACCTTTTTCTACTAT+AGG + Chr3:101250116-101250135 None:intergenic 35.0%
! CGGAGTGATAAATTTAAGAC+AGG - Chr3:101247522-101247541 MsG0380017839.01.T01:intron 35.0%
! CTTTCTACAGTTTTTGTGGT+GGG - Chr3:101249040-101249059 MsG0380017839.01.T01:intron 35.0%
! GAATGCTGTTCTTTTCTTAG+AGG - Chr3:101248472-101248491 MsG0380017839.01.T01:intron 35.0%
! GATGTTGTTGTCTGAAATAG+TGG + Chr3:101251073-101251092 None:intergenic 35.0%
! GTGTGTGAACCAATTTTTGA+TGG + Chr3:101250360-101250379 None:intergenic 35.0%
! TCTGGAGCAAATGCAAAAAA+AGG + Chr3:101251985-101252004 None:intergenic 35.0%
! TCTTTCTACAGTTTTTGTGG+TGG - Chr3:101249039-101249058 MsG0380017839.01.T01:intron 35.0%
! TGGATACTATTTTATGCCCT+TGG - Chr3:101248323-101248342 MsG0380017839.01.T01:CDS 35.0%
! TGTGAACCAATTTTTGATGG+AGG + Chr3:101250357-101250376 None:intergenic 35.0%
! TTTGAAACTGAGCTTTGCTA+GGG - Chr3:101252581-101252600 MsG0380017839.01.T01:CDS 35.0%
!! CACAAAACAAGGTATTGTTC+CGG - Chr3:101251642-101251661 MsG0380017839.01.T01:intron 35.0%
!! CTGTGGACTAGTAAAGAATT+TGG - Chr3:101249800-101249819 MsG0380017839.01.T01:intron 35.0%
!! GACACATCCTTTTAAAAGGA+TGG - Chr3:101248867-101248886 MsG0380017839.01.T01:intron 35.0%
!! TGGTTTGCAAAGGATTAGTT+TGG + Chr3:101248924-101248943 None:intergenic 35.0%
!! TTCCTGTGTTGTTTGATTGT+GGG - Chr3:101249865-101249884 MsG0380017839.01.T01:intron 35.0%
!!! GTCTTTTTTTCCAAGAACAG+TGG + Chr3:101249916-101249935 None:intergenic 35.0%
!!! GTTTTTTGGTGTGACTATCT+TGG - Chr3:101249337-101249356 MsG0380017839.01.T01:intron 35.0%
AAATCCAGCTCTGTCATGTA+CGG + Chr3:101252092-101252111 None:intergenic 40.0%
AAGAACGAGTATACAATGGG+AGG - Chr3:101252125-101252144 MsG0380017839.01.T01:intron 40.0%
AAGCATTCTTCACAGGCTAT+TGG - Chr3:101250980-101250999 MsG0380017839.01.T01:CDS 40.0%
AAGGCAACAAGTTCAGTACA+CGG - Chr3:101248963-101248982 MsG0380017839.01.T01:intron 40.0%
ACAAACATCAATCCCTTCAC+TGG + Chr3:101249595-101249614 None:intergenic 40.0%
ACAGTCGTGTATTAAGCATC+TGG - Chr3:101250221-101250240 MsG0380017839.01.T01:intron 40.0%
ACGCCAAAAAACGGATAACA+GGG - Chr3:101248640-101248659 MsG0380017839.01.T01:CDS 40.0%
ACTTATGCTTCCTAGACATG+CGG - Chr3:101247212-101247231 MsG0380017839.01.T01:CDS 40.0%
AGGCTAAAACACACTGAAAG+GGG - Chr3:101251363-101251382 MsG0380017839.01.T01:intron 40.0%
AGTCTTCCTAAATGGAGACT+GGG - Chr3:101249938-101249957 MsG0380017839.01.T01:intron 40.0%
AGTGAAGGGATTGATGTTTG+TGG - Chr3:101249594-101249613 MsG0380017839.01.T01:CDS 40.0%
AGTGATTGTGAATTTGGCCA+TGG - Chr3:101247659-101247678 MsG0380017839.01.T01:CDS 40.0%
ATCCCACAATCAAACAACAC+AGG + Chr3:101249870-101249889 None:intergenic 40.0%
ATCCGCTCGCTCATATTTAT+GGG - Chr3:101252167-101252186 MsG0380017839.01.T01:intron 40.0%
CAAAACTTAACCGCATGTCT+AGG + Chr3:101247225-101247244 None:intergenic 40.0%
CAAGGCTAAAACACACTGAA+AGG - Chr3:101251361-101251380 MsG0380017839.01.T01:intron 40.0%
CAATCACACCACTATGCAAT+AGG + Chr3:101250811-101250830 None:intergenic 40.0%
CACTCGTCAATAGATTCTGA+GGG + Chr3:101248524-101248543 None:intergenic 40.0%
CAGAGCTACGAAATAGAAGA+CGG - Chr3:101249994-101250013 MsG0380017839.01.T01:intron 40.0%
CAGAGGACAAAGTAAAGTTC+AGG - Chr3:101252222-101252241 MsG0380017839.01.T01:intron 40.0%
CTTGGATAACCTGGATTACT+AGG - Chr3:101251100-101251119 MsG0380017839.01.T01:CDS 40.0%
GAGAACTTATCTCCAAGAAC+TGG + Chr3:101251562-101251581 None:intergenic 40.0%
GATAAGTTCTCCAGTATGCA+CGG - Chr3:101251571-101251590 MsG0380017839.01.T01:intron 40.0%
GATGATACTACCACTGTTCT+TGG - Chr3:101249903-101249922 MsG0380017839.01.T01:intron 40.0%
GATTCACAGAATCGGCAATA+GGG + Chr3:101252476-101252495 None:intergenic 40.0%
GGTATGGTGTCTTTGATGTT+CGG - Chr3:101247463-101247482 MsG0380017839.01.T01:intron 40.0%
GTATACTTGTTCTCCAGTGA+AGG - Chr3:101249579-101249598 MsG0380017839.01.T01:CDS 40.0%
GTCATGTACGGAACATAAAC+CGG + Chr3:101252080-101252099 None:intergenic 40.0%
GTTCTTCTTCATCGTCGTTT+AGG + Chr3:101246888-101246907 None:intergenic 40.0%
TAACGTTCATTCAGTCAGCT+AGG + Chr3:101249093-101249112 None:intergenic 40.0%
TAATGGAAGTTTGTGGTTGC+AGG - Chr3:101249724-101249743 MsG0380017839.01.T01:intron 40.0%
TACTAACCACTAAGAGTGGA+CGG + Chr3:101250739-101250758 None:intergenic 40.0%
TACTATAGGGATTCTCTCCA+TGG + Chr3:101250102-101250121 None:intergenic 40.0%
TCTGATTGTCTTGGATAACC+TGG - Chr3:101251091-101251110 MsG0380017839.01.T01:CDS 40.0%
TGAAACATTACCTGTGAAGC+TGG + Chr3:101251817-101251836 None:intergenic 40.0%
TGAAAGGGGACATGTTCAAA+AGG - Chr3:101251377-101251396 MsG0380017839.01.T01:intron 40.0%
TGATTCACAGAATCGGCAAT+AGG + Chr3:101252477-101252496 None:intergenic 40.0%
TGGAGCTAAGTTATTGTCTC+AGG - Chr3:101252529-101252548 MsG0380017839.01.T01:CDS 40.0%
TGTTCAGATCTGAGCACATA+AGG - Chr3:101251251-101251270 MsG0380017839.01.T01:intron 40.0%
TTACTTTGTCCTCTGACATG+TGG + Chr3:101252217-101252236 None:intergenic 40.0%
TTCTTAGAAGGGTCAAAACC+AGG + Chr3:101247093-101247112 None:intergenic 40.0%
TTCTTAGAGGAACGTGTCAA+GGG - Chr3:101248485-101248504 MsG0380017839.01.T01:intron 40.0%
TTGAAACTGAGCTTTGCTAG+GGG - Chr3:101252582-101252601 MsG0380017839.01.T01:CDS 40.0%
TTGAAGTCCTCTTCTTCTTC+AGG + Chr3:101250845-101250864 None:intergenic 40.0%
TTTCTTAGAGGAACGTGTCA+AGG - Chr3:101248484-101248503 MsG0380017839.01.T01:intron 40.0%
! AATTCAGCCATGGTTTGCAA+AGG + Chr3:101248934-101248953 None:intergenic 40.0%
! ACCAATTTTTGATGGAGGAG+CGG + Chr3:101250352-101250371 None:intergenic 40.0%
! AGATCTGACTTGACCATAAC+AGG + Chr3:101247615-101247634 None:intergenic 40.0%
! AGGTATCAAGTTTGGTGAGA+TGG - Chr3:101252304-101252323 MsG0380017839.01.T01:intron 40.0%
! CTAGAAGCTGGTTTAGGAAA+GGG - Chr3:101251722-101251741 MsG0380017839.01.T01:intron 40.0%
! GATCTCATCGATTATGGAGA+GGG - Chr3:101248371-101248390 MsG0380017839.01.T01:intron 40.0%
! TAATGGGCAGAATGCAATTG+TGG - Chr3:101251156-101251175 MsG0380017839.01.T01:CDS 40.0%
! TATCTGAGACGAATCACTCA+GGG + Chr3:101252387-101252406 None:intergenic 40.0%
! TGATCTCATCGATTATGGAG+AGG - Chr3:101248370-101248389 MsG0380017839.01.T01:intron 40.0%
! TTTATCTGAAGTGGCACCAA+GGG + Chr3:101248342-101248361 None:intergenic 40.0%
! TTTGGAAAGACAGAGCATCA+AGG - Chr3:101251343-101251362 MsG0380017839.01.T01:intron 40.0%
!! AAATAGAGGCTTGAGTTGAC+TGG - Chr3:101248673-101248692 MsG0380017839.01.T01:CDS 40.0%
!! ACAGAGCTGGATTTTCAAGA+TGG - Chr3:101252098-101252117 MsG0380017839.01.T01:intron 40.0%
!! ACAGGGATTGATTTGGTTTC+TGG - Chr3:101249534-101249553 MsG0380017839.01.T01:CDS 40.0%
!! ACGGTAGACTGGTTTAACTT+TGG + Chr3:101249244-101249263 None:intergenic 40.0%
!! AGAGCTGGATTTTCAAGATG+GGG - Chr3:101252100-101252119 MsG0380017839.01.T01:intron 40.0%
!! ATTTTTCGACCACCAGATAC+CGG + Chr3:101252446-101252465 None:intergenic 40.0%
!! CAGAGCTGGATTTTCAAGAT+GGG - Chr3:101252099-101252118 MsG0380017839.01.T01:intron 40.0%
!! CGATTTGGAGGTATCAAGTT+TGG - Chr3:101252296-101252315 MsG0380017839.01.T01:intron 40.0%
!! CTTCCTGTGTTGTTTGATTG+TGG - Chr3:101249864-101249883 MsG0380017839.01.T01:intron 40.0%
!! GGTTTTGACCCTTCTAAGAA+AGG - Chr3:101247093-101247112 MsG0380017839.01.T01:CDS 40.0%
!! GTTCTCTTACTGGCTTATAC+TGG - Chr3:101248617-101248636 MsG0380017839.01.T01:CDS 40.0%
!! TGCTGTTGTTTCGTTAAGAC+AGG - Chr3:101251434-101251453 MsG0380017839.01.T01:intron 40.0%
!! TGTGTTGTTTGATTGTGGGA+TGG - Chr3:101249869-101249888 MsG0380017839.01.T01:intron 40.0%
!! TTTAGGATTTCTGGAGTCTC+AGG - Chr3:101251606-101251625 MsG0380017839.01.T01:intron 40.0%
!!! AGACTAGATGCCGAGTTTTT+TGG - Chr3:101249323-101249342 MsG0380017839.01.T01:intron 40.0%
!!! CATCCCTGTTATCCGTTTTT+TGG + Chr3:101248646-101248665 None:intergenic 40.0%
!!! GAAGGGTGTTTTAGGATTTC+TGG - Chr3:101251597-101251616 MsG0380017839.01.T01:intron 40.0%
AAACCAGTCTACCGTCTGTA+TGG - Chr3:101249249-101249268 MsG0380017839.01.T01:intron 45.0%
AAGTGCACTTTGCACATGCT+CGG - Chr3:101248719-101248738 MsG0380017839.01.T01:CDS 45.0%
ACAAGTTCAGTACACGGGAA+AGG - Chr3:101248969-101248988 MsG0380017839.01.T01:intron 45.0%
AGCCTGTGAAGAATGCTTCA+GGG + Chr3:101250978-101250997 None:intergenic 45.0%
AGGCAACAAGTTCAGTACAC+GGG - Chr3:101248964-101248983 MsG0380017839.01.T01:intron 45.0%
AGTGGTGTGATTGAGCTGAT+TGG - Chr3:101250818-101250837 MsG0380017839.01.T01:intron 45.0%
ATCGATTATGGAGAGGGAGA+TGG - Chr3:101248377-101248396 MsG0380017839.01.T01:intron 45.0%
ATGCGCATATTATCTGACGC+AGG - Chr3:101250704-101250723 MsG0380017839.01.T01:intron 45.0%
CAACGAGCTAGGTGAATACA+TGG - Chr3:101246927-101246946 MsG0380017839.01.T01:CDS 45.0%
CAGATACATGCCCTCAATGA+GGG + Chr3:101249403-101249422 None:intergenic 45.0%
CAGGTTAGAAGTCCAGTTCT+TGG - Chr3:101251547-101251566 MsG0380017839.01.T01:intron 45.0%
CATGGTGAAGGTTCTCTTAC+TGG - Chr3:101248607-101248626 MsG0380017839.01.T01:CDS 45.0%
CATGTAAAGTGAAGTCCCCT+TGG - Chr3:101249196-101249215 MsG0380017839.01.T01:intron 45.0%
CCTTTCCTAAACCAGCTTCT+AGG + Chr3:101251724-101251743 None:intergenic 45.0%
CGTAACTGTAAGCTTTCCGA+AGG + Chr3:101247070-101247089 None:intergenic 45.0%
CTCAGTACAACGACAGAACA+TGG + Chr3:101252056-101252075 None:intergenic 45.0%
CTCCAGTAGAGAACACTCTT+TGG + Chr3:101248843-101248862 None:intergenic 45.0%
CTCTCCATGGCTGAAATGAA+AGG + Chr3:101250089-101250108 None:intergenic 45.0%
CTTGCCTTTCATTTCAGCCA+TGG - Chr3:101250082-101250101 MsG0380017839.01.T01:intron 45.0%
GACGCCAAAAAACGGATAAC+AGG - Chr3:101248639-101248658 MsG0380017839.01.T01:CDS 45.0%
GAGTCTTCCTAAATGGAGAC+TGG - Chr3:101249937-101249956 MsG0380017839.01.T01:intron 45.0%
GATCCGCTCGCTCATATTTA+TGG - Chr3:101252166-101252185 MsG0380017839.01.T01:intron 45.0%
GATTGTGAATTTGGCCATGG+AGG - Chr3:101247662-101247681 MsG0380017839.01.T01:CDS 45.0%
GCACTCGTCAATAGATTCTG+AGG + Chr3:101248525-101248544 None:intergenic 45.0%
GCATATTATCTGACGCAGGA+AGG - Chr3:101250708-101250727 MsG0380017839.01.T01:intron 45.0%
GTAAAGAATTTGGCTGTCGC+AGG - Chr3:101249810-101249829 MsG0380017839.01.T01:intron 45.0%
GTATCATCTGCTCTGCAAGT+TGG + Chr3:101250184-101250203 None:intergenic 45.0%
GTGAAGAATGCTTCAGGGAT+TGG + Chr3:101250973-101250992 None:intergenic 45.0%
TAGCCTGTGAAGAATGCTTC+AGG + Chr3:101250979-101250998 None:intergenic 45.0%
TATTGGGAGACTGCCTGTTA+TGG - Chr3:101247599-101247618 MsG0380017839.01.T01:intron 45.0%
TCAGATACATGCCCTCAATG+AGG + Chr3:101249404-101249423 None:intergenic 45.0%
TCTGGTGGTCGAAAAATACG+AGG - Chr3:101252449-101252468 MsG0380017839.01.T01:CDS 45.0%
TGAATCAGCCGATGACATTG+TGG - Chr3:101252490-101252509 MsG0380017839.01.T01:CDS 45.0%
TGATCAGAAAGTAGCCTCCA+TGG + Chr3:101247679-101247698 None:intergenic 45.0%
TGCAAATGTGATCTTGCGAC+CGG - Chr3:101252424-101252443 MsG0380017839.01.T01:CDS 45.0%
TGTATTCACCTAGCTCGTTG+AGG + Chr3:101246927-101246946 None:intergenic 45.0%
TGTCTGTTGAGATTCCGGTA+TGG - Chr3:101248303-101248322 MsG0380017839.01.T01:CDS 45.0%
TTCAGTACACGGGAAAGGTT+GGG - Chr3:101248974-101248993 MsG0380017839.01.T01:intron 45.0%
TTCCTAAATGGAGACTGGGT+TGG - Chr3:101249942-101249961 MsG0380017839.01.T01:intron 45.0%
TTCTGTCGTTGTACTGAGTC+CGG - Chr3:101252058-101252077 MsG0380017839.01.T01:intron 45.0%
TTTCGGTCCCTATTGCATAG+TGG - Chr3:101250800-101250819 MsG0380017839.01.T01:intron 45.0%
! AAAAAGAAAGGCACGGTACC+TGG - Chr3:101248580-101248599 MsG0380017839.01.T01:CDS 45.0%
! AGTCCACAGTTTTCACCAAC+TGG + Chr3:101249789-101249808 None:intergenic 45.0%
! ATCCCTGAAGCATTCTTCAC+AGG - Chr3:101250973-101250992 MsG0380017839.01.T01:CDS 45.0%
! CAACTCCTAGAAGCTGGTTT+AGG - Chr3:101251716-101251735 MsG0380017839.01.T01:intron 45.0%
! CATCGGCTGATTCACAGAAT+CGG + Chr3:101252484-101252503 None:intergenic 45.0%
! CCAATTTTTGATGGAGGAGC+GGG + Chr3:101250351-101250370 None:intergenic 45.0%
! CCTAGAAGCTGGTTTAGGAA+AGG - Chr3:101251721-101251740 MsG0380017839.01.T01:intron 45.0%
! CTGTAAAGTGCCCTCATTGA+GGG - Chr3:101249390-101249409 MsG0380017839.01.T01:intron 45.0%
! CTTTATCTGAAGTGGCACCA+AGG + Chr3:101248343-101248362 None:intergenic 45.0%
! GATTGGTCCTGAAGAAGAAG+AGG - Chr3:101250835-101250854 MsG0380017839.01.T01:intron 45.0%
! GGAGGCTACTTTCTGATCAA+GGG - Chr3:101247680-101247699 MsG0380017839.01.T01:CDS 45.0%
! GTATCTGAGACGAATCACTC+AGG + Chr3:101252388-101252407 None:intergenic 45.0%
! GTCCACAGTTTTCACCAACT+GGG + Chr3:101249788-101249807 None:intergenic 45.0%
! GTCTGAAATAGTGGTCTCTG+AGG + Chr3:101251064-101251083 None:intergenic 45.0%
! GTGGAGAATTCCAGCATTGA+AGG - Chr3:101248243-101248262 MsG0380017839.01.T01:CDS 45.0%
! TCCACAGTTTTCACCAACTG+GGG + Chr3:101249787-101249806 None:intergenic 45.0%
! TCGTCAATAGATTCTGAGGG+CGG + Chr3:101248521-101248540 None:intergenic 45.0%
! TCTGTAAAGTGCCCTCATTG+AGG - Chr3:101249389-101249408 MsG0380017839.01.T01:intron 45.0%
! TGGAGGCTACTTTCTGATCA+AGG - Chr3:101247679-101247698 MsG0380017839.01.T01:CDS 45.0%
! TTTCGTAGCTCTGCCACAAA+CGG + Chr3:101249987-101250006 None:intergenic 45.0%
!! CTCCAAAGAGTGTTCTCTAC+TGG - Chr3:101248838-101248857 MsG0380017839.01.T01:intron 45.0%
!! GGAAAGGGTATTGCTTGTGT+TGG - Chr3:101251737-101251756 MsG0380017839.01.T01:intron 45.0%
!! TTTGTTGTCGGCTTCACGAA+TGG + Chr3:101248429-101248448 None:intergenic 45.0%
AATCGCTTCCTGTCAGCAAC+AGG + Chr3:101252281-101252300 None:intergenic 50.0%
ACGAATCACTCAGGGTGAAG+AGG + Chr3:101252379-101252398 None:intergenic 50.0%
ACTCGCCACCACAATGTCAT+CGG + Chr3:101252501-101252520 None:intergenic 50.0%
ACTCGGCATCTAGTCTACAC+AGG + Chr3:101249319-101249338 None:intergenic 50.0%
AGACCATACAGACGGTAGAC+TGG + Chr3:101249255-101249274 None:intergenic 50.0%
ATCAGCCGATGACATTGTGG+TGG - Chr3:101252493-101252512 MsG0380017839.01.T01:CDS 50.0%
CAAACCTTACCCCAGTGAGA+AGG + Chr3:101249753-101249772 None:intergenic 50.0%
CCCGCTCCTCCATCAAAAAT+TGG - Chr3:101250348-101250367 MsG0380017839.01.T01:intron 50.0%
CGAGTATACAATGGGAGGAC+TGG - Chr3:101252130-101252149 MsG0380017839.01.T01:intron 50.0%
CGTGATTGCCTGATAGCTCA+TGG - Chr3:101252329-101252348 MsG0380017839.01.T01:CDS 50.0%
CTCCAACCCAGTCTCCATTT+AGG + Chr3:101249947-101249966 None:intergenic 50.0%
CTGATGCACCATGAGCTATC+AGG + Chr3:101252340-101252359 None:intergenic 50.0%
GAACCTTCACCATGTATGCC+AGG + Chr3:101248601-101248620 None:intergenic 50.0%
GAGTGTTCTCTACTGGAGCA+TGG - Chr3:101248845-101248864 MsG0380017839.01.T01:intron 50.0%
GATTCTCCGTCCACTCTTAG+TGG - Chr3:101250730-101250749 MsG0380017839.01.T01:intron 50.0%
GCAGTCGCTGGTAGAATGTA+GGG + Chr3:101252193-101252212 None:intergenic 50.0%
GCTCTGCAAAGAGACCTCTA+TGG - Chr3:101248757-101248776 MsG0380017839.01.T01:CDS 50.0%
GCTGAAATCCTCAACGAGCT+AGG - Chr3:101246916-101246935 MsG0380017839.01.T01:CDS 50.0%
GGAAAGCTTACAGTTACGCC+TGG - Chr3:101247072-101247091 MsG0380017839.01.T01:CDS 50.0%
GGCCCATAAATATGAGCGAG+CGG + Chr3:101252172-101252191 None:intergenic 50.0%
GTACCTGGCATACATGGTGA+AGG - Chr3:101248595-101248614 MsG0380017839.01.T01:CDS 50.0%
GTGAGGGAAATGCATGCATG+CGG + Chr3:101251682-101251701 None:intergenic 50.0%
GTGCTGTCCTCGAATGATGA+GGG - Chr3:101251402-101251421 MsG0380017839.01.T01:intron 50.0%
GTGGCTGTCAATGTGCATCT+TGG - Chr3:101251175-101251194 MsG0380017839.01.T01:intron 50.0%
GTTCAGTACACGGGAAAGGT+TGG - Chr3:101248973-101248992 MsG0380017839.01.T01:intron 50.0%
GTTCTTCCCCTCATCATTCG+AGG + Chr3:101251412-101251431 None:intergenic 50.0%
GTTGCTGACAGGAAGCGATT+TGG - Chr3:101252281-101252300 MsG0380017839.01.T01:intron 50.0%
TCAGTACACGGGAAAGGTTG+GGG - Chr3:101248975-101248994 MsG0380017839.01.T01:intron 50.0%
TCCAGTATGCACGGACAGAA+GGG - Chr3:101251580-101251599 MsG0380017839.01.T01:intron 50.0%
TCGACAGAGGAAGTGGAGAA+AGG + Chr3:101251782-101251801 None:intergenic 50.0%
TCTCAGGAGCTGTTCAGCAT+GGG - Chr3:101252545-101252564 MsG0380017839.01.T01:CDS 50.0%
TGACCAGGAGTTTGTCGTGA+GGG + Chr3:101251698-101251717 None:intergenic 50.0%
TGCAGTCGCTGGTAGAATGT+AGG + Chr3:101252194-101252213 None:intergenic 50.0%
TGCTGTCCTCGAATGATGAG+GGG - Chr3:101251403-101251422 MsG0380017839.01.T01:intron 50.0%
TGTGCTGTCCTCGAATGATG+AGG - Chr3:101251401-101251420 MsG0380017839.01.T01:intron 50.0%
TGTTCCGTACATGACAGAGC+TGG - Chr3:101252085-101252104 MsG0380017839.01.T01:intron 50.0%
TGTTTCCTCTCTACCCCAGT+TGG - Chr3:101249771-101249790 MsG0380017839.01.T01:intron 50.0%
TTCAGATTCCGCACCGTTTG+TGG - Chr3:101249971-101249990 MsG0380017839.01.T01:intron 50.0%
TTGACCAGGAGTTTGTCGTG+AGG + Chr3:101251699-101251718 None:intergenic 50.0%
TTGCAGGCATCCTTCTCACT+GGG - Chr3:101249740-101249759 MsG0380017839.01.T01:intron 50.0%
TTTCACCAACTGGGGTAGAG+AGG + Chr3:101249779-101249798 None:intergenic 50.0%
TTTCCCTCACGACAAACTCC+TGG - Chr3:101251692-101251711 MsG0380017839.01.T01:intron 50.0%
! AGAAGCGCAGTTCATCACCA+AGG + Chr3:101251218-101251237 None:intergenic 50.0%
! CTCTGAAGACGAGCATGTCT+AGG + Chr3:101247188-101247207 None:intergenic 50.0%
!! ACCCCAGTTGGTGAAAACTG+TGG - Chr3:101249783-101249802 MsG0380017839.01.T01:intron 50.0%
!! GAAGAGGCGCTCATACAAGT+TGG + Chr3:101252363-101252382 None:intergenic 50.0%
!! GATGGAAAGGATTTCTGGCG+TGG - Chr3:101248885-101248904 MsG0380017839.01.T01:intron 50.0%
!!! CACGGACAGAAGGGTGTTTT+AGG - Chr3:101251589-101251608 MsG0380017839.01.T01:intron 50.0%
AACTGCGCTTCTTTGCAGCG+TGG - Chr3:101251226-101251245 MsG0380017839.01.T01:intron 55.0%
ACCCTTCTGTCCGTGCATAC+TGG + Chr3:101251584-101251603 None:intergenic 55.0%
ATCTTGCGACCGGTATCTGG+TGG - Chr3:101252434-101252453 MsG0380017839.01.T01:CDS 55.0%
CACATGCTCGGAAGCGAATG+GGG - Chr3:101248731-101248750 MsG0380017839.01.T01:CDS 55.0%
CCATCACAGACCAGCTTCAC+AGG - Chr3:101251804-101251823 MsG0380017839.01.T01:CDS 55.0%
CCTGGTCAACTCCTAGAAGC+TGG - Chr3:101251710-101251729 MsG0380017839.01.T01:intron 55.0%
CGGCATCTAGTCTACACAGG+TGG + Chr3:101249316-101249335 None:intergenic 55.0%
CTCCAGTATGCACGGACAGA+AGG - Chr3:101251579-101251598 MsG0380017839.01.T01:intron 55.0%
GATGGCTTCGACAGAGGAAG+TGG + Chr3:101251789-101251808 None:intergenic 55.0%
GCACATGCTCGGAAGCGAAT+GGG - Chr3:101248730-101248749 MsG0380017839.01.T01:CDS 55.0%
GCATCCTTCTCACTGGGGTA+AGG - Chr3:101249746-101249765 MsG0380017839.01.T01:intron 55.0%
GTCTCAGGAGCTGTTCAGCA+TGG - Chr3:101252544-101252563 MsG0380017839.01.T01:CDS 55.0%
GTCTGTGATGGCTTCGACAG+AGG + Chr3:101251795-101251814 None:intergenic 55.0%
GTGATCTTGCGACCGGTATC+TGG - Chr3:101252431-101252450 MsG0380017839.01.T01:CDS 55.0%
GTTGCAGGCATCCTTCTCAC+TGG - Chr3:101249739-101249758 MsG0380017839.01.T01:intron 55.0%
TCTGGCGTGGTTGCAACTCT+TGG - Chr3:101248898-101248917 MsG0380017839.01.T01:intron 55.0%
TGCACATGCTCGGAAGCGAA+TGG - Chr3:101248729-101248748 MsG0380017839.01.T01:CDS 55.0%
TGCAGGCATCCTTCTCACTG+GGG - Chr3:101249741-101249760 MsG0380017839.01.T01:intron 55.0%
! ACAATGGGAGGACTGGTGAC+TGG - Chr3:101252137-101252156 MsG0380017839.01.T01:intron 55.0%
! CCAGCTTCTAGGAGTTGACC+AGG + Chr3:101251713-101251732 None:intergenic 55.0%
! CCTGTGAAGCTGGTCTGTGA+TGG + Chr3:101251807-101251826 None:intergenic 55.0%
! GCTGACAGGAAGCGATTTGG+AGG - Chr3:101252284-101252303 MsG0380017839.01.T01:intron 55.0%
! GTGGTGGCGAGTGTTCCATA+TGG - Chr3:101252509-101252528 MsG0380017839.01.T01:CDS 55.0%
! TAGCTCTGCCACAAACGGTG+CGG + Chr3:101249982-101250001 None:intergenic 55.0%
CAACAGGCTGTCTGGTCAGC+GGG + Chr3:101252265-101252284 None:intergenic 60.0%
CCAGACAGCCTGTTGCTGAC+AGG - Chr3:101252270-101252289 MsG0380017839.01.T01:intron 60.0%
CCTGTCAGCAACAGGCTGTC+TGG + Chr3:101252273-101252292 None:intergenic 60.0%
CTGACATGTGGTGCAGTCGC+TGG + Chr3:101252205-101252224 None:intergenic 60.0%
GCAACAGGCTGTCTGGTCAG+CGG + Chr3:101252266-101252285 None:intergenic 60.0%
GCGACTGCACCACATGTCAG+AGG - Chr3:101252205-101252224 MsG0380017839.01.T01:intron 60.0%
GGCACGGTACCTGGCATACA+TGG - Chr3:101248589-101248608 MsG0380017839.01.T01:CDS 60.0%
GTCTGGTCAGCGGGTGAACT+GGG + Chr3:101252256-101252275 None:intergenic 60.0%
TGCTCGGAAGCGAATGGGGA+AGG - Chr3:101248735-101248754 MsG0380017839.01.T01:CDS 60.0%
TGTCTGGTCAGCGGGTGAAC+TGG + Chr3:101252257-101252276 None:intergenic 60.0%
TTGATGGAGGAGCGGGACAC+AGG + Chr3:101250344-101250363 None:intergenic 60.0%
!! GGGTGCTGACTCTGCTGAGA+AGG - Chr3:101247700-101247719 MsG0380017839.01.T01:CDS 60.0%
! TGTGTGCGCGCGCGCGCGCG+CGG - Chr3:101247502-101247521 MsG0380017839.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr3 gene 101246874 101252601 101246874 ID=MsG0380017839.01;Name=MsG0380017839.01
Chr3 mRNA 101246874 101252601 101246874 ID=MsG0380017839.01.T01;Parent=MsG0380017839.01;Name=MsG0380017839.01.T01;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|1|1|11|0|799
Chr3 exon 101252317 101252601 101252317 ID=MsG0380017839.01.T01:exon:18058;Parent=MsG0380017839.01.T01
Chr3 exon 101251754 101251909 101251754 ID=MsG0380017839.01.T01:exon:18057;Parent=MsG0380017839.01.T01
Chr3 exon 101251270 101251346 101251270 ID=MsG0380017839.01.T01:exon:18056;Parent=MsG0380017839.01.T01
Chr3 exon 101250881 101251180 101250881 ID=MsG0380017839.01.T01:exon:18055;Parent=MsG0380017839.01.T01
Chr3 exon 101249438 101249729 101249438 ID=MsG0380017839.01.T01:exon:18054;Parent=MsG0380017839.01.T01
Chr3 exon 101248546 101248804 101248546 ID=MsG0380017839.01.T01:exon:18053;Parent=MsG0380017839.01.T01
Chr3 exon 101248228 101248353 101248228 ID=MsG0380017839.01.T01:exon:18052;Parent=MsG0380017839.01.T01
Chr3 exon 101248020 101248123 101248020 ID=MsG0380017839.01.T01:exon:18051;Parent=MsG0380017839.01.T01
Chr3 exon 101247823 101247925 101247823 ID=MsG0380017839.01.T01:exon:18050;Parent=MsG0380017839.01.T01
Chr3 exon 101247650 101247749 101247650 ID=MsG0380017839.01.T01:exon:18049;Parent=MsG0380017839.01.T01
Chr3 exon 101246874 101247471 101246874 ID=MsG0380017839.01.T01:exon:18048;Parent=MsG0380017839.01.T01
Chr3 CDS 101252317 101252601 101252317 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101251754 101251909 101251754 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101251270 101251346 101251270 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101250881 101251180 101250881 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101249438 101249729 101249438 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101248546 101248804 101248546 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101248228 101248353 101248228 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101248020 101248123 101248020 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101247823 101247925 101247823 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101247650 101247749 101247650 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Chr3 CDS 101246874 101247471 101246874 ID=MsG0380017839.01.T01:cds;Parent=MsG0380017839.01.T01
Gene Sequence

>MsG0380017839.01.T01

ATGGACATTGACCTAAACGACGATGAAGAAGAACCATCAAATGCTGAAATCCTCAACGAGCTAGGTGAATACATGGTCAAATATTTCTGCAAAAAAGCTTCCATCATGTTCTTCAACGAGTATGGTTTAATCAGTCACCAAATCAATTCCTATAATCAATTCATCACTTCTGGTCTTCAAAATGCTTTCAATTCCTTCGGAAAGCTTACAGTTACGCCTGGTTTTGACCCTTCTAAGAAAGGAGAAAATGAACATTACTGTTATGCTACGGTTAAGTTTGGAAATAGAGATAATCATGGAGGAGAAGAGAGAAATAACTATTGGGAGACTGCCTGTTATGGTCAAGTCAGATCTCTGCTGATGAGTGATGTTGAAAAAAGTGATTGTGAATTTGGCCATGGAGGCTACTTTCTGATCAAGGGTGCTGACTCTGCTGAGAAGATTTTTATTGCACAAGAGCAAATATTTCTGAAGAGGCTTTGGGTTTCAAATATTCCGTATTGGACAGTTGCATACAATTTTTTTTTGTCTGTTGAGATTCCGGTATGGATACTATTTTATGCCCTTGGTGCCACTTCAGATAAAGAGATTGTTGATCTCATCGATTATGGAGAGGGAGATGGAAGAATTCATAACATTCTCTTTGCATCCATTCGTGAAGCCGACAACAAATGTGATACATTTCGTAGGGGAAAGAATGCTGTTCTTTTCTTAGAGGAACGTGTCAAGGGTGTTCAATATCCGCCCTCAGAATCTATTGACGAGTGCCTTAACTTGTATGTCTTTCCGAACATTAAGGGATTAAAAAGAAAGGCACGGCATCCTTCTCACTGGGGTAAGGTTTGTTTCCTCTCTACCCCAGTTGGTGAAAACTGTGGACTAGTAAAGAATTTGGCTGTCGCAGGAGTAGTGAGTACCAATATAACTGAATCTATACTTCCTGTGTTGTTTGATTGTGGGATGGAAGAACTTGTTGATGATACTACCACTGTTCTTGGAAAAAAAGACAGAGTCTTCCTAAATGGAGACTGGGTTGGAGTTTGTTCAGATTCCGCACCGTTTGTGGCAGAGCTACGAAATAGAAGACGGAAAAATGAATTGCCTCATCAGGTGGAAATCAAAAGAGATCAAAATCAACGAGAAATGCGCATATTATCTGACGCAGGAAGGATTCTCCGTCCACTCTTAGTGGTTAGTAATCTGCTCAAGATTAAAGGATCTAAGTCAGAGCATAAATCTTTTCGGTCCCTATTGCATAGTGGTGTGATTGAGCTGATTGGTCCTGAAGAAGAAGAGGACTTCAAGACTGCTTGGGGTGTTCAGTATTTATTTGGAAAAGAGGGAAAATCTTCTGTGAAGTACACACACTGTCAAAGTAAAGTTGTTCCGAAATCTGAATTCTATAATGGGCAGAATGCAATTGTGGCTGTCAATGTGCATCTTGGATATAATCAAGAAGATTCCTTGGTGATGAACTGCGCTTCTTTGCAGCGTGACAGAGCATCAAGGCTAAAACACACTGAAAGGGGACATGTTCAAAAGGTTGTGCTGTCCTCGAATGATGAGGGGAAGAACTTTGCTGTTGTTTCGTTAAGACAGGTTAGAAGTCCAGTTCTTGGAGATAAGTTCTCCAGTATGCACGGACAGAAGGGTGTTTTAGGATTTCTGGAGTCTCAGGAAAATTTTCCTTTCACAAAACAAGAAGCTGGTTTAGGAAAGGGTATTGCTTGTGTTGGTTCACTGAGAAATGCTACTCCTTTCTCCACTTCCTCTGTCGAAGCCATCACAGACCAGCTTCACAGACTCACTTTAATTTTAGGAATTTCTTTCCAAAGTTTCACTTTTAAGTTGCCATGTTCTGTCGTTGTACTGAGTCCGGTTTATGTTCCGTACATGACAGAGCTGGATTTTCAAGATGGGGAAAAGAACGAGTATACAATGGGAGGACTGGTGACTGGTGAGATGATCCGCTCGCTCATATTTATGGGCCCTACATTCTACCAGCGACTGCACCACATGTCAGAGGACAAAGTAAAGTTCAGGAACACTGGCCCAGTTCACCCGCTGACCAGACAGCCTGTTGCTGACAGGAAGCGATTTGGAGGTATCAAGTTTGGTGAGATGGAGCGTGATTGCCTGATAGCTCATGGTGCATCAGCCAACTTGTATGAGCGCCTCTTCACCCTGAGTGATTCGTCTCAGATACACATTTGTTGTAAATGTGCAAATGTGATCTTGCGACCGGTATCTGGTGGTCGAAAAATACGAGGTCCCTATTGCCGATTCTGTGAATCAGCCGATGACATTGTGGTGGCGAGTGTTCCATATGGAGCTAAGTTATTGTCTCAGGAGCTGTTCAGCATGGGTATTAACTTCAAATTTGAAACTGAGCTTTGCTAG
Protein sequence

>MsG0380017839.01.T01

MDIDLNDDEEEPSNAEILNELGEYMVKYFCKKASIMFFNEYGLISHQINSYNQFITSGLQNAFNSFGKLTVTPGFDPSKKGENEHYCYATVKFGNRDNHGGEERNNYWETACYGQVRSLLMSDVEKSDCEFGHGGYFLIKGADSAEKIFIAQEQIFLKRLWVSNIPYWTVAYNFFLSVEIPVWILFYALGATSDKEIVDLIDYGEGDGRIHNILFASIREADNKCDTFRRGKNAVLFLEERVKGVQYPPSESIDECLNLYVFPNIKGLKRKARHPSHWGKVCFLSTPVGENCGLVKNLAVAGVVSTNITESILPVLFDCGMEELVDDTTTVLGKKDRVFLNGDWVGVCSDSAPFVAELRNRRRKNELPHQVEIKRDQNQREMRILSDAGRILRPLLVVSNLLKIKGSKSEHKSFRSLLHSGVIELIGPEEEEDFKTAWGVQYLFGKEGKSSVKYTHCQSKVVPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNCASLQRDRASRLKHTERGHVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQEAGLGKGIACVGSLRNATPFSTSSVEAITDQLHRLTLILGISFQSFTFKLPCSVVVLSPVYVPYMTELDFQDGEKNEYTMGGLVTGEMIRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICCKCANVILRPVSGGRKIRGPYCRFCESADDIVVASVPYGAKLLSQELFSMGINFKFETELC*