AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017929.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017929.01.T01 MTR_3g115250 65.217 414 57 10 8 394 57 410 5.51e-135 414
MsG0380017929.01.T01 MTR_3g115250 97.093 172 5 0 413 584 599 770 3.88e-111 352
MsG0380017929.01.T01 MTR_7g029115 79.581 191 34 2 395 584 480 666 5.09e-96 310
MsG0380017929.01.T01 MTR_7g029115 47.343 414 101 13 8 388 2 331 3.97e-81 270
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017929.01.T01 AT1G42440 46.420 405 129 10 8 384 57 401 1.03e-92 303
MsG0380017929.01.T01 AT1G42440 67.442 172 56 0 413 584 600 771 6.34e-77 261

Find 141 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAATGCCTTTCTGTATTT+AGG 0.217493 3:-102300509 MsG0380017929.01.T01:CDS
TTAAACACTGGGCCAATTCT+AGG 0.248375 3:+102298863 None:intergenic
TTTGTTCAGGTTCATGTATC+AGG 0.277316 3:-102299777 MsG0380017929.01.T01:intron
CGCTTAAGGATTATCCTATC+TGG 0.301245 3:+102296089 None:intergenic
TAACTCTTCCTTGGATTTGA+TGG 0.308367 3:+102296340 None:intergenic
GATCTTACCTCATGGCTAAC+AGG 0.314593 3:-102300045 MsG0380017929.01.T01:CDS
CAATTAAATGTCTTCTCAAC+GGG 0.320863 3:-102294573 MsG0380017929.01.T01:CDS
CTTTCTGTATTTAGGTCTCT+TGG 0.321593 3:-102300501 MsG0380017929.01.T01:intron
TACCAACAGGTTCTTTAATT+CGG 0.325914 3:+102295430 None:intergenic
GTGAAGTGAAGTCAGATAAT+AGG 0.327475 3:+102298895 None:intergenic
CATCCTCTCTAACTCTCTTT+AGG 0.340352 3:+102296156 None:intergenic
TAATATTTCATGTTGGGTTT+CGG 0.340526 3:-102296319 MsG0380017929.01.T01:CDS
ATAATCCAGAGGATGTTAAA+TGG 0.346023 3:-102295635 MsG0380017929.01.T01:CDS
ATGAAATATTAACTCTTCCT+TGG 0.358498 3:+102296331 None:intergenic
TTCAGTATATCAAAATTAAG+AGG 0.363767 3:+102299389 None:intergenic
GCCTGCCATTTGTTTGTTGT+TGG 0.371675 3:-102296954 MsG0380017929.01.T01:CDS
TTGAACCATTTAACATCCTC+TGG 0.377883 3:+102295630 None:intergenic
TTCTACTTCACCGATTCATT+TGG 0.378255 3:-102300534 MsG0380017929.01.T01:CDS
TGCCGGTACTTCAGAATATC+AGG 0.379829 3:-102298667 MsG0380017929.01.T01:intron
GGAAGAGGAGGAAATGAAAT+TGG 0.381099 3:+102296188 None:intergenic
TGTGCAAAATGAGGTTCTTA+AGG 0.386847 3:-102299737 MsG0380017929.01.T01:CDS
GATTCTTGATTGTCAGGATC+TGG 0.387784 3:+102299147 None:intergenic
TCAGAAACCAGCAAGGGTTC+TGG 0.387959 3:+102294320 None:intergenic
ACTAAAGATTCTTGATTGTC+AGG 0.389261 3:+102299141 None:intergenic
ACGAAGGCCAGAACCCTTGC+TGG 0.390043 3:-102294327 MsG0380017929.01.T01:CDS
GTTGTAGGTTGCTGATCTAC+TGG 0.391585 3:-102300597 MsG0380017929.01.T01:intron
AGCCAATGGGAATGAAGCTT+TGG 0.399180 3:-102294411 MsG0380017929.01.T01:CDS
ACTCTCTTTAGGACTATTGT+AGG 0.403962 3:+102296167 None:intergenic
AATCACGCGAGGAGGACATT+TGG 0.407524 3:+102301536 None:intergenic
AAGAGTTAATATTTCATGTT+GGG 0.407651 3:-102296325 MsG0380017929.01.T01:CDS
TGCTCTCCAGCAAGAGGATC+AGG 0.407999 3:+102299105 None:intergenic
TGCGATTACCAGTTGATTCA+CGG 0.409640 3:+102299851 None:intergenic
CCTACTATCCTGCATGGAAA+TGG 0.428337 3:-102300713 MsG0380017929.01.T01:CDS
AACTCTTCCTTGGATTTGAT+GGG 0.435274 3:+102296341 None:intergenic
AATACACCTGATCCTCTTGC+TGG 0.436387 3:-102299111 MsG0380017929.01.T01:CDS
GTGTTGCATGACAGAAGGTT+TGG 0.439762 3:+102299363 None:intergenic
CCATTTCCATGCAGGATAGT+AGG 0.442246 3:+102300713 None:intergenic
CAATGGTGTTCCACTTCATC+AGG 0.442604 3:+102296921 None:intergenic
CTGTCAAAATAACACGCTTA+AGG 0.448236 3:+102296075 None:intergenic
GTTGGGTTTCGGCAATTTGT+TGG 0.450299 3:-102296308 MsG0380017929.01.T01:CDS
TTCAGATTGACTTCCTTGAA+TGG 0.452927 3:-102294388 MsG0380017929.01.T01:CDS
TGGATAAAATTTACAGTCCT+CGG 0.454419 3:+102300266 None:intergenic
TAAACTGCATCCTCCATTCA+AGG 0.455152 3:+102294375 None:intergenic
GAATGGAGGATGCAGTTTAG+TGG 0.462108 3:-102294371 MsG0380017929.01.T01:CDS
TAACCTCTCCGTGAATCAAC+TGG 0.462651 3:-102299859 MsG0380017929.01.T01:intron
TTTGCTCTTTAAAGAGGGAC+AGG 0.469357 3:+102300098 None:intergenic
TAAGCCTTTGCTCTTTAAAG+AGG 0.475551 3:+102300092 None:intergenic
TCGGCCACGAAGACCACGTT+TGG 0.476159 3:+102295449 None:intergenic
ACCTTCTGTCATGCAACACT+TGG 0.478705 3:-102299359 MsG0380017929.01.T01:CDS
AACCAAAGCTTCATTCCCAT+TGG 0.481626 3:+102294409 None:intergenic
AACATACCGTGTGTACCAAC+AGG 0.482792 3:+102295417 None:intergenic
TACCTTAGCCATTTCCATGC+AGG 0.483045 3:+102300705 None:intergenic
AAGAGGATCAGGTGTATTCT+CGG 0.486750 3:+102299116 None:intergenic
CTACACCAACAACAAACAAA+TGG 0.488458 3:+102296949 None:intergenic
AGATCGTCCTTTGTATCAGC+TGG 0.489015 3:+102300246 None:intergenic
GCAGTACAAGCTATGATGAT+TGG 0.497768 3:-102298940 MsG0380017929.01.T01:CDS
TATACCAAACGTGGTCTTCG+TGG 0.499131 3:-102295453 MsG0380017929.01.T01:CDS
TGATCCTCTTGCTGGAGAGC+AGG 0.499589 3:-102299103 MsG0380017929.01.T01:intron
CGTTTGGTATAGAGCTCTAC+AGG 0.500904 3:+102295465 None:intergenic
GAAGAGTTAATATTTCATGT+TGG 0.502923 3:-102296326 MsG0380017929.01.T01:CDS
CAGGTTCATGTATCAGGTGC+AGG 0.506352 3:-102299771 MsG0380017929.01.T01:CDS
GGATAAAATTTACAGTCCTC+GGG 0.510534 3:+102300267 None:intergenic
TGAAAGAAAAGAGAATTGAC+TGG 0.515685 3:-102301561 MsG0380017929.01.T01:CDS
TTTGCTATTTCAGCTTCCGT+TGG 0.516802 3:+102298738 None:intergenic
ATGGAGAGGTTTCTCCATGC+TGG 0.517625 3:-102296239 MsG0380017929.01.T01:CDS
AGAGGATGTTAAATGGTTCA+AGG 0.518162 3:-102295628 MsG0380017929.01.T01:intron
CTAATCCACAGTAGCACAAA+GGG 0.518684 3:+102301158 None:intergenic
GGAATTCAATAGAAAGCCAA+TGG 0.518870 3:-102294425 MsG0380017929.01.T01:intron
AAAGGCTTAAAACTCCTCAT+TGG 0.520870 3:-102300078 MsG0380017929.01.T01:CDS
TGAAAACCGTTGATCCAGAT+AGG 0.524381 3:-102296103 MsG0380017929.01.T01:CDS
ATGAACTCACTAGAGAAAGT+TGG 0.527619 3:+102296281 None:intergenic
GCATTGACTTCCAAATGAAT+CGG 0.531196 3:+102300524 None:intergenic
TTTAGGACTATTGTAGGAAG+AGG 0.534660 3:+102296173 None:intergenic
ATTTCCAACTGTGCAAAATG+AGG 0.535326 3:-102299746 MsG0380017929.01.T01:CDS
AACAGCAGCCACTGCTGGTG+TGG 0.536206 3:+102296133 None:intergenic
AAGCCTTTGCTCTTTAAAGA+GGG 0.548670 3:+102300093 None:intergenic
TGTCCCTCTTTAAAGAGCAA+AGG 0.550901 3:-102300096 MsG0380017929.01.T01:CDS
CTGATGAAGTGGAACACCAT+TGG 0.554907 3:-102296920 MsG0380017929.01.T01:CDS
TCAGTATATCAAAATTAAGA+GGG 0.557522 3:+102299390 None:intergenic
TACCTGATATTCTGAAGTAC+CGG 0.562450 3:+102298665 None:intergenic
ACACCAGCAGTGGCTGCTGT+TGG 0.565022 3:-102296131 MsG0380017929.01.T01:CDS
CAGGTCGACACGGTATATGA+TGG 0.565557 3:-102299927 MsG0380017929.01.T01:CDS
CTTCCTAGCCGAACATCCAA+TGG 0.566219 3:+102296904 None:intergenic
ATCCTGCATGGAAATGGCTA+AGG 0.567897 3:-102300707 MsG0380017929.01.T01:intron
GAACCAACAGCAGCCACTGC+TGG 0.569329 3:+102296128 None:intergenic
AGGACTATTGTAGGAAGAGG+AGG 0.571987 3:+102296176 None:intergenic
GCAATTAAATGTCTTCTCAA+CGG 0.574684 3:-102294574 MsG0380017929.01.T01:CDS
TCCAAGTGTTGCATGACAGA+AGG 0.574877 3:+102299358 None:intergenic
ACCAACAACAAACAAATGGC+AGG 0.575467 3:+102296953 None:intergenic
CAAGAGACCTAAATACAGAA+AGG 0.576022 3:+102300502 None:intergenic
TGACTATGATGACGAGGAGT+CGG 0.577007 3:-102298483 MsG0380017929.01.T01:CDS
GATTATCCTATCTGGATCAA+CGG 0.583547 3:+102296097 None:intergenic
GAATTCAATAGAAAGCCAAT+GGG 0.588065 3:-102294424 MsG0380017929.01.T01:intron
AGAAAGAGGAAGCTTCCTGC+CGG 0.588451 3:-102298684 MsG0380017929.01.T01:CDS
TGATGCACCCATCAAATCCA+AGG 0.589101 3:-102296348 MsG0380017929.01.T01:CDS
AGATTGACTTCCTTGAATGG+AGG 0.590046 3:-102294385 MsG0380017929.01.T01:CDS
TGATATTCTGAAGTACCGGC+AGG 0.593932 3:+102298669 None:intergenic
TCTACCTGCTCTCCAGCAAG+AGG 0.594437 3:+102299099 None:intergenic
AGTCCTAAAGAGAGTTAGAG+AGG 0.596044 3:-102296159 MsG0380017929.01.T01:CDS
ACAGTCCTCGGGAAATTCAG+AGG 0.597157 3:+102300278 None:intergenic
AATGACCGCAATATTGGCAA+AGG 0.600026 3:-102301725 MsG0380017929.01.T01:intron
CCCTAAATTACAGGTCGACA+CGG 0.600237 3:-102299937 MsG0380017929.01.T01:intron
AAACACAGACAAGAACAAGA+TGG 0.607069 3:-102296258 MsG0380017929.01.T01:CDS
AACGGAAGCTGAAATAGCAA+AGG 0.610424 3:-102298736 MsG0380017929.01.T01:CDS
AACTCAACGATCTTACCTCA+TGG 0.611394 3:-102300053 MsG0380017929.01.T01:CDS
GTCAAAAGATCATCTGCAAG+TGG 0.617065 3:+102301133 None:intergenic
AGAGGATGCCACACCAGCAG+TGG 0.621106 3:-102296141 MsG0380017929.01.T01:CDS
ATCTTACCTCATGGCTAACA+GGG 0.623590 3:-102300044 MsG0380017929.01.T01:intron
TGGTGACCTACTATCCTGCA+TGG 0.628570 3:-102300719 MsG0380017929.01.T01:CDS
TCTAATCCACAGTAGCACAA+AGG 0.629927 3:+102301157 None:intergenic
TGTAGAGTATCCTGATGAAG+TGG 0.631648 3:-102296931 MsG0380017929.01.T01:CDS
TTACCAGTTGATTCACGGAG+AGG 0.634966 3:+102299856 None:intergenic
GAGCACCTTTGCCAATATTG+CGG 0.638112 3:+102301720 None:intergenic
TTGTTGCCAGACATGGCCAA+CGG 0.638255 3:-102298754 MsG0380017929.01.T01:intron
TCTTGCCTCTGAATTTCCCG+AGG 0.638569 3:-102300283 MsG0380017929.01.T01:CDS
CAACTGAAAAGCGTCCAGCA+TGG 0.638608 3:+102296225 None:intergenic
TTCAGATGAAGTGCATGATG+TGG 0.644636 3:-102299673 MsG0380017929.01.T01:CDS
TTATCTAAAAGAATCTTCTG+CGG 0.644915 3:-102301106 MsG0380017929.01.T01:CDS
CTGACGTTCAGAAACCAGCA+AGG 0.645451 3:+102294313 None:intergenic
GGCCGAATTAAAGAACCTGT+TGG 0.645685 3:-102295432 MsG0380017929.01.T01:CDS
AAAGAACCTGTTGGTACACA+CGG 0.646711 3:-102295423 MsG0380017929.01.T01:intron
CAGACAAGAACAAGATGGAG+AGG 0.647406 3:-102296253 MsG0380017929.01.T01:CDS
GATCGTTGAGTTCTCCAATG+AGG 0.650248 3:+102300064 None:intergenic
TGTGACAATGAAGATGATGA+TGG 0.653424 3:-102298458 MsG0380017929.01.T01:intron
AAAGATGCACCTCGTCTCAG+TGG 0.655701 3:-102299896 MsG0380017929.01.T01:CDS
CAGGTACTAAAAGCACCTCA+TGG 0.661304 3:-102300739 MsG0380017929.01.T01:CDS
TTATTTACTTAAGAAAACGA+AGG 0.661808 3:-102294343 MsG0380017929.01.T01:CDS
AGATGAAGTGCATGATGTGG+AGG 0.666002 3:-102299670 MsG0380017929.01.T01:intron
TTCAAACCCTGTTAGCCATG+AGG 0.672073 3:+102300038 None:intergenic
TAAAAGAATCTTCTGCGGTG+CGG 0.675733 3:-102301101 MsG0380017929.01.T01:intron
TACAAAGGACGATCTTCACA+AGG 0.679750 3:-102300238 MsG0380017929.01.T01:intron
TTACTCACAATCACGCGAGG+AGG 0.685766 3:+102301528 None:intergenic
TGACGTTCAGAAACCAGCAA+GGG 0.692449 3:+102294314 None:intergenic
ACGAAGTAACCACTGAGACG+AGG 0.693438 3:+102299887 None:intergenic
ACACATGTTCTATAATCCAG+AGG 0.697379 3:-102295646 MsG0380017929.01.T01:CDS
AATTTACTCACAATCACGCG+AGG 0.710656 3:+102301525 None:intergenic
TTCACACGAAGACCTTGCAG+AGG 0.711741 3:+102300565 None:intergenic
GTAGAGCTCTATACCAAACG+TGG 0.732540 3:-102295462 MsG0380017929.01.T01:CDS
TGTTGATGACTATGATGACG+AGG 0.735802 3:-102298489 MsG0380017929.01.T01:CDS
CAGGATAGTAGGTCACCATG+AGG 0.742498 3:+102300724 None:intergenic
AATTAAATGTCTTCTCAACG+GGG 0.743323 3:-102294572 MsG0380017929.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTGTAAGTATAAATAA+TGG + Chr3:102296807-102296826 None:intergenic 15.0%
!! ATTGAATTTAATCATTTATG+CGG - Chr3:102295645-102295664 MsG0380017929.01.T01:CDS 15.0%
!! TATTGAATAACAATTTCAAT+TGG - Chr3:102296548-102296567 MsG0380017929.01.T01:intron 15.0%
!! TTATTTATACAATGAACATT+TGG + Chr3:102298415-102298434 None:intergenic 15.0%
!!! AATTATCAAACTCATAATTT+TGG + Chr3:102299307-102299326 None:intergenic 15.0%
!!! TCAAATATACATTTTACAAA+TGG + Chr3:102296977-102296996 None:intergenic 15.0%
!! AAAAAAATAATAAGGATGTG+AGG + Chr3:102294829-102294848 None:intergenic 20.0%
!! AAAAAATAATAAGGATGTGA+GGG + Chr3:102294828-102294847 None:intergenic 20.0%
!! AAGAGTTAATATTTCATGTT+GGG - Chr3:102299703-102299722 MsG0380017929.01.T01:CDS 20.0%
!! AATAAACTTAAAACAGCTTA+TGG - Chr3:102294672-102294691 MsG0380017929.01.T01:intron 20.0%
!! AATCTAATAAAGGAAAATGA+CGG + Chr3:102301546-102301565 None:intergenic 20.0%
!! ATAAACTTAAAACAGCTTAT+GGG - Chr3:102294673-102294692 MsG0380017929.01.T01:intron 20.0%
!! ATAATATGTACATATTCAGA+AGG - Chr3:102296504-102296523 MsG0380017929.01.T01:intron 20.0%
!! ATTATTTCATTCATTCATGA+CGG - Chr3:102295815-102295834 MsG0380017929.01.T01:intron 20.0%
!! CATTAGAATTATTACACATT+GGG - Chr3:102301098-102301117 MsG0380017929.01.T01:intron 20.0%
!! GAAATACCTTTCAATAATTT+AGG + Chr3:102298281-102298300 None:intergenic 20.0%
!! GAAGGAACAAAAAAATAATA+AGG + Chr3:102294837-102294856 None:intergenic 20.0%
!! GGTTTCAGAAAAAAATAAAT+GGG + Chr3:102300136-102300155 None:intergenic 20.0%
!! GTTTCAGAAAAAAATAAATG+GGG + Chr3:102300135-102300154 None:intergenic 20.0%
!! TAATTGAATATCCATAATAC+CGG + Chr3:102298167-102298186 None:intergenic 20.0%
!! TAGCATTCTCAAATAAATTT+AGG - Chr3:102301393-102301412 MsG0380017929.01.T01:intron 20.0%
!! TATGTTGCAAAAAGTTATAT+AGG + Chr3:102294584-102294603 None:intergenic 20.0%
!! TCAGTATATCAAAATTAAGA+GGG + Chr3:102296641-102296660 None:intergenic 20.0%
!! TCATTAGAATTATTACACAT+TGG - Chr3:102301097-102301116 MsG0380017929.01.T01:intron 20.0%
!! TTATTTACTTAAGAAAACGA+AGG - Chr3:102301685-102301704 MsG0380017929.01.T01:intron 20.0%
!! TTCAATCAATATCGAATAAT+GGG + Chr3:102300924-102300943 None:intergenic 20.0%
!! TTCAGTATATCAAAATTAAG+AGG + Chr3:102296642-102296661 None:intergenic 20.0%
!! TTGAATTCTATTATTGATCA+AGG - Chr3:102301582-102301601 MsG0380017929.01.T01:CDS 20.0%
!! TTTCAATCAATATCGAATAA+TGG + Chr3:102300925-102300944 None:intergenic 20.0%
!!! AAATGTATATTTGATTTACG+AGG - Chr3:102296983-102297002 MsG0380017929.01.T01:intron 20.0%
!!! AACTTGTTTATTGAGAAATT+AGG - Chr3:102295157-102295176 MsG0380017929.01.T01:intron 20.0%
!!! AATAGTTTTTGAACATTTTG+TGG - Chr3:102300315-102300334 MsG0380017929.01.T01:CDS 20.0%
!!! ATACCAATATTTTTCAAACA+TGG - Chr3:102298538-102298557 MsG0380017929.01.T01:intron 20.0%
!!! ATATTGTAATTTTCTTATCC+TGG - Chr3:102300787-102300806 MsG0380017929.01.T01:intron 20.0%
!!! CGTTTTCTTAAGTAAATAAT+CGG + Chr3:102301684-102301703 None:intergenic 20.0%
!!! GTTTTCTTAAGTAAATAATC+GGG + Chr3:102301683-102301702 None:intergenic 20.0%
!!! GTTTTTTTGCAATTGTTTTT+TGG - Chr3:102301343-102301362 MsG0380017929.01.T01:intron 20.0%
!!! TAACTAATTTTGAGAGAATA+AGG + Chr3:102295010-102295029 None:intergenic 20.0%
!!! TAACTTTTTGCAACATAATA+CGG - Chr3:102294587-102294606 MsG0380017929.01.T01:intron 20.0%
!!! TAAGAGTATTGAAAACAATA+AGG + Chr3:102297431-102297450 None:intergenic 20.0%
!!! TCCTTTATTAGATTTTTGAT+GGG - Chr3:102301552-102301571 MsG0380017929.01.T01:CDS 20.0%
!!! TCTCAAAATTAGTTAATTTG+TGG - Chr3:102295015-102295034 MsG0380017929.01.T01:intron 20.0%
!!! TTACCAATTTTTTGAACAAA+CGG + Chr3:102296580-102296599 None:intergenic 20.0%
!!! TTATAAAAGTTTTCAGTTGA+TGG + Chr3:102300012-102300031 None:intergenic 20.0%
!!! TTCCTTTATTAGATTTTTGA+TGG - Chr3:102301551-102301570 MsG0380017929.01.T01:CDS 20.0%
!!! TTGAGGTTATAAAATTTTGT+TGG - Chr3:102298475-102298494 MsG0380017929.01.T01:CDS 20.0%
!!! TTTTATTGCTTCATTAATGA+CGG - Chr3:102300710-102300729 MsG0380017929.01.T01:CDS 20.0%
! AAATGAGTATGTGATGAATA+AGG + Chr3:102294787-102294806 None:intergenic 25.0%
! AAGAGTTTGGAAAAAAAAGA+AGG + Chr3:102298091-102298110 None:intergenic 25.0%
! AAGATACAAGATGAAACTTA+AGG - Chr3:102298749-102298768 MsG0380017929.01.T01:intron 25.0%
! AATCTAATGATTTCAGAAAC+TGG + Chr3:102300443-102300462 None:intergenic 25.0%
! AATTGCAAAAAAACATACAC+GGG + Chr3:102301337-102301356 None:intergenic 25.0%
! AGCAAAAAAAGATAAGAAAG+AGG - Chr3:102297330-102297349 MsG0380017929.01.T01:intron 25.0%
! AGTAAGAAGATTAGCAATAA+GGG + Chr3:102300647-102300666 None:intergenic 25.0%
! ATAAACAGAATACGATCAAT+AGG + Chr3:102301422-102301441 None:intergenic 25.0%
! ATACCGTTTGTTCAAAAAAT+TGG - Chr3:102296574-102296593 MsG0380017929.01.T01:intron 25.0%
! ATCCAAAAAAAGGTAATCTA+TGG + Chr3:102298950-102298969 None:intergenic 25.0%
! ATCTAATAAAGGAAAATGAC+GGG + Chr3:102301545-102301564 None:intergenic 25.0%
! ATCTAATGATTTCAGAAACT+GGG + Chr3:102300442-102300461 None:intergenic 25.0%
! ATGAAATATTAACTCTTCCT+TGG + Chr3:102299700-102299719 None:intergenic 25.0%
! ATTCTTTACAGCAAATACAT+TGG - Chr3:102299219-102299238 MsG0380017929.01.T01:intron 25.0%
! CAATTGCAAAAAAACATACA+CGG + Chr3:102301338-102301357 None:intergenic 25.0%
! CAGTACTCATAATTTCTTAA+TGG - Chr3:102297008-102297027 MsG0380017929.01.T01:intron 25.0%
! CAGTGTTTAAACAAATTAGT+GGG - Chr3:102297178-102297197 MsG0380017929.01.T01:intron 25.0%
! CTTGCAAATAAATAAACACA+TGG + Chr3:102297218-102297237 None:intergenic 25.0%
! CTTTCTCCTAAATTATTGAA+AGG - Chr3:102298272-102298291 MsG0380017929.01.T01:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + Chr3:102297980-102297999 None:intergenic 25.0%
! GAAGAGTTAATATTTCATGT+TGG - Chr3:102299702-102299721 MsG0380017929.01.T01:CDS 25.0%
! GGGTTTCAGAAAAAAATAAA+TGG + Chr3:102300137-102300156 None:intergenic 25.0%
! GGGTTTGATAAATATAAACA+TGG - Chr3:102301118-102301137 MsG0380017929.01.T01:CDS 25.0%
! GTATCTAGTATGGAAATAAT+AGG - Chr3:102297486-102297505 MsG0380017929.01.T01:intron 25.0%
! TAAACATGGTACTAATGAAA+AGG - Chr3:102301132-102301151 MsG0380017929.01.T01:CDS 25.0%
! TAATATTTCATGTTGGGTTT+CGG - Chr3:102299709-102299728 MsG0380017929.01.T01:CDS 25.0%
! TAGTAAGAAGATTAGCAATA+AGG + Chr3:102300648-102300667 None:intergenic 25.0%
! TCAATCAATATCGAATAATG+GGG + Chr3:102300923-102300942 None:intergenic 25.0%
! TCCCATCAAAAATCTAATAA+AGG + Chr3:102301556-102301575 None:intergenic 25.0%
! TCTGACATTGTAATAATATC+AGG - Chr3:102299261-102299280 MsG0380017929.01.T01:intron 25.0%
! TCTTCAGATTAATGTATTTG+AGG - Chr3:102298458-102298477 MsG0380017929.01.T01:intron 25.0%
! TGATAGAATCAATAAACATC+TGG + Chr3:102296029-102296048 None:intergenic 25.0%
! TTATCTAAAAGAATCTTCTG+CGG - Chr3:102294922-102294941 MsG0380017929.01.T01:intron 25.0%
! TTCAGAAGGTAAGTAAAAAA+TGG - Chr3:102296518-102296537 MsG0380017929.01.T01:intron 25.0%
!! AAGCTTTTGTTGACATTATA+GGG + Chr3:102300157-102300176 None:intergenic 25.0%
!! ATAACTTGTACCATTGAAAA+AGG - Chr3:102298361-102298380 MsG0380017929.01.T01:intron 25.0%
!! ATGCTAAGGAAAATATTTTC+CGG + Chr3:102301223-102301242 None:intergenic 25.0%
!! GGTAAAATCTTTGTTTCAAA+TGG - Chr3:102300808-102300827 MsG0380017929.01.T01:intron 25.0%
!! GTTTGAATTTGGGATTTAAT+TGG - Chr3:102298321-102298340 MsG0380017929.01.T01:intron 25.0%
!! GTTTTCAGATTGACAAAAAA+CGG + Chr3:102296606-102296625 None:intergenic 25.0%
!! TAATGCATGATCACTATTTT+GGG - Chr3:102298697-102298716 MsG0380017929.01.T01:CDS 25.0%
!! TATTCTGTTTATTGTTGTTC+AGG - Chr3:102301430-102301449 MsG0380017929.01.T01:intron 25.0%
!! TTAATGCATGATCACTATTT+TGG - Chr3:102298696-102298715 MsG0380017929.01.T01:CDS 25.0%
!! TTATTAGATTTTTGATGGGA+TGG - Chr3:102301556-102301575 MsG0380017929.01.T01:CDS 25.0%
!! TTTTTCTTGAATCAAGGAAA+TGG + Chr3:102296319-102296338 None:intergenic 25.0%
!!! ATAATTTTGGCATAATCTTG+AGG + Chr3:102299294-102299313 None:intergenic 25.0%
!!! ATGTTCATTTATTTTTGCCA+AGG - Chr3:102299979-102299998 MsG0380017929.01.T01:intron 25.0%
!!! ATTATTTTTTTGTTCCTTCC+AGG - Chr3:102294838-102294857 MsG0380017929.01.T01:intron 25.0%
!!! ATTGCTTTTAGCTTTTTTCA+AGG - Chr3:102295351-102295370 MsG0380017929.01.T01:intron 25.0%
!!! CAATATTTTTCAAACATGGT+GGG - Chr3:102298542-102298561 MsG0380017929.01.T01:intron 25.0%
!!! CACTAATTTGTTTAAACACT+GGG + Chr3:102297179-102297198 None:intergenic 25.0%
!!! CATTCTTATTTTTGGAACTT+TGG - Chr3:102295589-102295608 MsG0380017929.01.T01:intron 25.0%
!!! TTCATTTCTTTGTTTTAGCT+CGG + Chr3:102295702-102295721 None:intergenic 25.0%
!!! TTCTATAAGACCTTTTTCAA+TGG + Chr3:102298374-102298393 None:intergenic 25.0%
!!! TTTACGTTTTGATACTCTTT+GGG + Chr3:102300351-102300370 None:intergenic 25.0%
!!! TTTCAAGGATTTTAGTTTGA+GGG - Chr3:102295366-102295385 MsG0380017929.01.T01:intron 25.0%
!!! TTTCACTTCTGATTGTTTTT+TGG - Chr3:102297402-102297421 MsG0380017929.01.T01:intron 25.0%
!!! TTTCCTACTTTTAATGTTGT+AGG - Chr3:102296842-102296861 MsG0380017929.01.T01:intron 25.0%
!!! TTTGAAACAAAGATTTTACC+AGG + Chr3:102300808-102300827 None:intergenic 25.0%
!!! TTTTCAAGGATTTTAGTTTG+AGG - Chr3:102295365-102295384 MsG0380017929.01.T01:intron 25.0%
AAAAGATCATAATGTCCAAG+TGG + Chr3:102296764-102296783 None:intergenic 30.0%
AAAAGCTTGCGTATTACTTA+TGG - Chr3:102300169-102300188 MsG0380017929.01.T01:intron 30.0%
AAATGAGTATTAGATCACGA+TGG - Chr3:102297634-102297653 MsG0380017929.01.T01:intron 30.0%
AAGAAAAAATCAGGACTTGA+TGG - Chr3:102296331-102296350 MsG0380017929.01.T01:CDS 30.0%
AATTAAATGTCTTCTCAACG+GGG - Chr3:102301456-102301475 MsG0380017929.01.T01:intron 30.0%
ACTAAAGATTCTTGATTGTC+AGG + Chr3:102296890-102296909 None:intergenic 30.0%
ATAATCCAGAGGATGTTAAA+TGG - Chr3:102300393-102300412 MsG0380017929.01.T01:intron 30.0%
ATGTCTTTGCATATCGAATT+TGG - Chr3:102300212-102300231 MsG0380017929.01.T01:intron 30.0%
ATTCTTGCTCATCTAAGAAA+AGG + Chr3:102298991-102299010 None:intergenic 30.0%
ATTGAAATGATTGTTTGCCA+AGG - Chr3:102300938-102300957 MsG0380017929.01.T01:intron 30.0%
ATTGCAAAAAAACATACACG+GGG + Chr3:102301336-102301355 None:intergenic 30.0%
CAAATGCCAGAACAAAATAA+AGG + Chr3:102297794-102297813 None:intergenic 30.0%
CAACTTCAAATCATCCATAA+AGG + Chr3:102299018-102299037 None:intergenic 30.0%
CAATTAAATGTCTTCTCAAC+GGG - Chr3:102301455-102301474 MsG0380017929.01.T01:intron 30.0%
CACATTAAGAAACCATGTTA+GGG + Chr3:102300529-102300548 None:intergenic 30.0%
CATTTGAACACTGTAAGTAT+TGG - Chr3:102297808-102297827 MsG0380017929.01.T01:intron 30.0%
CCAAGGAATCAAAATTAATC+TGG + Chr3:102298653-102298672 None:intergenic 30.0%
CCACCATGTTTGAAAAATAT+TGG + Chr3:102298544-102298563 None:intergenic 30.0%
CCAGTGTTTAAACAAATTAG+TGG - Chr3:102297177-102297196 MsG0380017929.01.T01:intron 30.0%
CCTTGATTCAAGAAAAAATC+AGG - Chr3:102296322-102296341 MsG0380017929.01.T01:CDS 30.0%
CTAAAAAATTGTATTGGAGG+AGG + Chr3:102297977-102297996 None:intergenic 30.0%
CTAACATGGTTTCTTAATGT+GGG - Chr3:102300528-102300547 MsG0380017929.01.T01:CDS 30.0%
GAATTCAATAGAAAGCCAAT+GGG - Chr3:102301604-102301623 MsG0380017929.01.T01:intron 30.0%
GCAATTAAATGTCTTCTCAA+CGG - Chr3:102301454-102301473 MsG0380017929.01.T01:intron 30.0%
GCATGTTTGTGTTTGAATTT+GGG - Chr3:102298311-102298330 MsG0380017929.01.T01:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG + Chr3:102297983-102298002 None:intergenic 30.0%
GTATGGAAATAATAGGTATC+TGG - Chr3:102297493-102297512 MsG0380017929.01.T01:intron 30.0%
TACCAACAGGTTCTTTAATT+CGG + Chr3:102300601-102300620 None:intergenic 30.0%
TCCCATGTATGTTTAATGTA+CGG - Chr3:102295241-102295260 MsG0380017929.01.T01:intron 30.0%
TCTTCTTACTATGAACTTTC+AGG - Chr3:102300657-102300676 MsG0380017929.01.T01:intron 30.0%
TGAAAGAAAAGAGAATTGAC+TGG - Chr3:102294467-102294486 MsG0380017929.01.T01:intron 30.0%
TGACCTACAACATTAAAAGT+AGG + Chr3:102296848-102296867 None:intergenic 30.0%
TGCATGTTTGTGTTTGAATT+TGG - Chr3:102298310-102298329 MsG0380017929.01.T01:intron 30.0%
TGGATAAAATTTACAGTCCT+CGG + Chr3:102295765-102295784 None:intergenic 30.0%
TGTCTTTGCATATCGAATTT+GGG - Chr3:102300213-102300232 MsG0380017929.01.T01:intron 30.0%
TTGAAATGATTGTTTGCCAA+GGG - Chr3:102300939-102300958 MsG0380017929.01.T01:intron 30.0%
TTGGAAAAAAAAGAAGGAGT+AGG + Chr3:102298085-102298104 None:intergenic 30.0%
TTTATTGAGAAATTAGGCAG+TGG - Chr3:102295163-102295182 MsG0380017929.01.T01:intron 30.0%
! AGGTATCTGGTATTATTTTC+AGG - Chr3:102297506-102297525 MsG0380017929.01.T01:intron 30.0%
! ATTTTATCCAGCTGATACAA+AGG - Chr3:102295775-102295794 MsG0380017929.01.T01:intron 30.0%
! CAAGCTTTTGTTGACATTAT+AGG + Chr3:102300158-102300177 None:intergenic 30.0%
! CGAAAAAAAGCATGAAAGTA+TGG - Chr3:102298866-102298885 MsG0380017929.01.T01:intron 30.0%
! CTTTATGGATGATTTGAAGT+TGG - Chr3:102299016-102299035 MsG0380017929.01.T01:intron 30.0%
! GTTTCTACAAGTTTTCAAAC+AGG - Chr3:102294709-102294728 MsG0380017929.01.T01:intron 30.0%
! TAATGAAAGAACTTGTTCTC+TGG - Chr3:102300484-102300503 MsG0380017929.01.T01:intron 30.0%
! TGTCTTATTCGTGTAAGTTA+CGG - Chr3:102295565-102295584 MsG0380017929.01.T01:intron 30.0%
! TTTTTACCACCCTAAATTAC+AGG - Chr3:102296082-102296101 MsG0380017929.01.T01:CDS 30.0%
!! AGTATTGGTAAGTTCTACTT+AGG - Chr3:102297823-102297842 MsG0380017929.01.T01:intron 30.0%
!! CACTATTTTAAGCCTAGAAT+TGG - Chr3:102297153-102297172 MsG0380017929.01.T01:intron 30.0%
!! CCAATATTTTTCAAACATGG+TGG - Chr3:102298541-102298560 MsG0380017929.01.T01:intron 30.0%
!! CCACTAATTTGTTTAAACAC+TGG + Chr3:102297180-102297199 None:intergenic 30.0%
!! CTTTACGTTTTGATACTCTT+TGG + Chr3:102300352-102300371 None:intergenic 30.0%
!! GATTCTTTTGTTTAACGTTC+TGG - Chr3:102297237-102297256 MsG0380017929.01.T01:intron 30.0%
!! TCTTGCTAAAGCTTTAGAAT+TGG - Chr3:102299349-102299368 MsG0380017929.01.T01:CDS 30.0%
!! TTACGTTTTGATACTCTTTG+GGG + Chr3:102300350-102300369 None:intergenic 30.0%
!! TTATGGTTCTATGGTCTTTT+TGG - Chr3:102300186-102300205 MsG0380017929.01.T01:intron 30.0%
!!! CATGCTTTTTTTCGAAAAAG+AGG + Chr3:102298860-102298879 None:intergenic 30.0%
!!! CCAGATTAATTTTGATTCCT+TGG - Chr3:102298650-102298669 MsG0380017929.01.T01:intron 30.0%
!!! CCTGATTTTTTCTTGAATCA+AGG + Chr3:102296325-102296344 None:intergenic 30.0%
!!! CTTTTAAGATTGAGGTTCAA+TGG - Chr3:102296437-102296456 MsG0380017929.01.T01:intron 30.0%
!!! GTTACGGTCATTCTTATTTT+TGG - Chr3:102295581-102295600 MsG0380017929.01.T01:intron 30.0%
!!! TATCTAGTTTTCAACTAGAC+TGG - Chr3:102296391-102296410 MsG0380017929.01.T01:intron 30.0%
!!! TCTTGTCCTTTATTTTGTTC+TGG - Chr3:102297785-102297804 MsG0380017929.01.T01:intron 30.0%
!!! TGCCATAGATTACCTTTTTT+TGG - Chr3:102298945-102298964 MsG0380017929.01.T01:CDS 30.0%
!!! TTAAGCGTGTTATTTTGACA+GGG - Chr3:102299955-102299974 MsG0380017929.01.T01:intron 30.0%
!!! TTTTTTTGGATTTCCACCTT+CGG - Chr3:102298959-102298978 MsG0380017929.01.T01:intron 30.0%
AAAACTATCTGTCCTTCTTC+AGG - Chr3:102299513-102299532 MsG0380017929.01.T01:intron 35.0%
AAACACAGACAAGAACAAGA+TGG - Chr3:102299770-102299789 MsG0380017929.01.T01:CDS 35.0%
AAAGGCTTAAAACTCCTCAT+TGG - Chr3:102295950-102295969 MsG0380017929.01.T01:intron 35.0%
AACTCTTCCTTGGATTTGAT+GGG + Chr3:102299690-102299709 None:intergenic 35.0%
AAGTACTTGGACTTCTTCAT+GGG - Chr3:102299170-102299189 MsG0380017929.01.T01:intron 35.0%
ACAATTGCCTCTTCTGAATA+CGG - Chr3:102294956-102294975 MsG0380017929.01.T01:intron 35.0%
ACACATGTTCTATAATCCAG+AGG - Chr3:102300382-102300401 MsG0380017929.01.T01:intron 35.0%
ACAGATACGTGAGCAAAAAA+AGG - Chr3:102294435-102294454 MsG0380017929.01.T01:intron 35.0%
ACAGGAAGTAGATAAAGACT+AGG - Chr3:102298723-102298742 MsG0380017929.01.T01:CDS 35.0%
ACTCTCTTGGTAAACAATGT+TGG - Chr3:102298615-102298634 MsG0380017929.01.T01:intron 35.0%
AGAGGATGTTAAATGGTTCA+AGG - Chr3:102300400-102300419 MsG0380017929.01.T01:intron 35.0%
AGCTTACAATCATTTCACGA+AGG - Chr3:102295621-102295640 MsG0380017929.01.T01:intron 35.0%
ATAAATTCAGCAGGTGGAAT+CGG + Chr3:102295847-102295866 None:intergenic 35.0%
ATAACATCTCTCTCTGTATG+CGG + Chr3:102298501-102298520 None:intergenic 35.0%
ATATAAAACCCTCCTCATTG+TGG + Chr3:102298004-102298023 None:intergenic 35.0%
ATGAACTCACTAGAGAAAGT+TGG + Chr3:102299750-102299769 None:intergenic 35.0%
ATGAGTCATGATGAGATTCA+TGG + Chr3:102300755-102300774 None:intergenic 35.0%
ATGTGTTGGATGAAGTAGAT+GGG - Chr3:102297594-102297613 MsG0380017929.01.T01:intron 35.0%
ATTGGAAAAAGAGAACAGAG+AGG - Chr3:102299367-102299386 MsG0380017929.01.T01:CDS 35.0%
ATTTCCAACTGTGCAAAATG+AGG - Chr3:102296282-102296301 MsG0380017929.01.T01:CDS 35.0%
CAAGAGACCTAAATACAGAA+AGG + Chr3:102295529-102295548 None:intergenic 35.0%
CAGGAAGTAGATAAAGACTA+GGG - Chr3:102298724-102298743 MsG0380017929.01.T01:CDS 35.0%
CATGAACCTGAACAAACAAA+AGG + Chr3:102296247-102296266 None:intergenic 35.0%
CATTATGATCTCAAACCACT+TGG - Chr3:102296746-102296765 MsG0380017929.01.T01:intron 35.0%
CCACATTAAGAAACCATGTT+AGG + Chr3:102300530-102300549 None:intergenic 35.0%
CCATGTTAGGGTGATAATTA+AGG + Chr3:102300517-102300536 None:intergenic 35.0%
CCCATGTATGTTTAATGTAC+GGG - Chr3:102295242-102295261 MsG0380017929.01.T01:intron 35.0%
CCCGTACATTAAACATACAT+GGG + Chr3:102295245-102295264 None:intergenic 35.0%
CCTAACATGGTTTCTTAATG+TGG - Chr3:102300527-102300546 MsG0380017929.01.T01:CDS 35.0%
CCTTAATTATCACCCTAACA+TGG - Chr3:102300514-102300533 MsG0380017929.01.T01:CDS 35.0%
CTACACCAACAACAAACAAA+TGG + Chr3:102299082-102299101 None:intergenic 35.0%
CTCGACTTCAGAGAAATAAA+TGG - Chr3:102294337-102294356 MsG0380017929.01.T01:CDS 35.0%
CTGTCAAAATAACACGCTTA+AGG + Chr3:102299956-102299975 None:intergenic 35.0%
CTTTCTGTATTTAGGTCTCT+TGG - Chr3:102295527-102295546 MsG0380017929.01.T01:intron 35.0%
GAAAAAAAAGAAGGAGTAGG+TGG + Chr3:102298082-102298101 None:intergenic 35.0%
GAAGGTGGAAATCCAAAAAA+AGG + Chr3:102298960-102298979 None:intergenic 35.0%
GAGACGAGTGATAAAAGTAA+AGG - Chr3:102301197-102301216 MsG0380017929.01.T01:intron 35.0%
GAGTATCTCAGTTTATCTCT+TGG - Chr3:102300061-102300080 MsG0380017929.01.T01:CDS 35.0%
GATAGATGAAACGAGTGATA+AGG - Chr3:102301154-102301173 MsG0380017929.01.T01:CDS 35.0%
GATTATCCTATCTGGATCAA+CGG + Chr3:102299934-102299953 None:intergenic 35.0%
GGAAGAAACAGAAGACATAT+GGG + Chr3:102298061-102298080 None:intergenic 35.0%
GGAATTCAATAGAAAGCCAA+TGG - Chr3:102301603-102301622 MsG0380017929.01.T01:intron 35.0%
GGATAAAATTTACAGTCCTC+GGG + Chr3:102295764-102295783 None:intergenic 35.0%
GTCAATGCCTTTCTGTATTT+AGG - Chr3:102295519-102295538 MsG0380017929.01.T01:intron 35.0%
GTCTTTGCATATCGAATTTG+GGG - Chr3:102300214-102300233 MsG0380017929.01.T01:intron 35.0%
GTGAAGTGAAGTCAGATAAT+AGG + Chr3:102297136-102297155 None:intergenic 35.0%
GTTGACTGTCTTAAAAGTGA+TGG + Chr3:102298597-102298616 None:intergenic 35.0%
TAACTCTTCCTTGGATTTGA+TGG + Chr3:102299691-102299710 None:intergenic 35.0%
TATAAAACCCTCCTCATTGT+GGG + Chr3:102298003-102298022 None:intergenic 35.0%
TATGTGTTGGATGAAGTAGA+TGG - Chr3:102297593-102297612 MsG0380017929.01.T01:intron 35.0%
TCATATAAGCCAATCCGAAT+AGG - Chr3:102294761-102294780 MsG0380017929.01.T01:intron 35.0%
TCCAAAAGGCAACATACTTT+AGG + Chr3:102299198-102299217 None:intergenic 35.0%
TCCCGTACATTAAACATACA+TGG + Chr3:102295246-102295265 None:intergenic 35.0%
TCTTAACAAGAACATGAGGT+AGG + Chr3:102300865-102300884 None:intergenic 35.0%
TCTTTGCATATCGAATTTGG+GGG - Chr3:102300215-102300234 MsG0380017929.01.T01:intron 35.0%
TGACAATGATTCAGTGATGA+TGG - Chr3:102297699-102297718 MsG0380017929.01.T01:intron 35.0%
TGCTGTAAAGAATCTCCAAA+AGG + Chr3:102299212-102299231 None:intergenic 35.0%
TGGAAGAAACAGAAGACATA+TGG + Chr3:102298062-102298081 None:intergenic 35.0%
TGTGACAATGAAGATGATGA+TGG - Chr3:102297570-102297589 MsG0380017929.01.T01:intron 35.0%
TGTGATGAATAAGGCCTATT+CGG + Chr3:102294778-102294797 None:intergenic 35.0%
TGTGCAAAATGAGGTTCTTA+AGG - Chr3:102296291-102296310 MsG0380017929.01.T01:CDS 35.0%
TTAGGAACTCTTAAAGGAAG+TGG - Chr3:102296414-102296433 MsG0380017929.01.T01:intron 35.0%
TTCGACACTATTTGTGTTGT+AGG - Chr3:102295416-102295435 MsG0380017929.01.T01:intron 35.0%
TTCGATATGAATGCACTGTT+TGG - Chr3:102294536-102294555 MsG0380017929.01.T01:intron 35.0%
TTGAACCATTTAACATCCTC+TGG + Chr3:102300401-102300420 None:intergenic 35.0%
TTTAATAATCCGTCCCATTG+CGG - Chr3:102298238-102298257 MsG0380017929.01.T01:intron 35.0%
TTTATTTCCAACAGCTCTCT+AGG + Chr3:102294658-102294677 None:intergenic 35.0%
TTTGGGGGGACAAAAATATA+GGG - Chr3:102297882-102297901 MsG0380017929.01.T01:intron 35.0%
! AAGCCTTTGCTCTTTAAAGA+GGG + Chr3:102295938-102295957 None:intergenic 35.0%
! AATTTCCAACAAAGTGCCAA+GGG + Chr3:102298926-102298945 None:intergenic 35.0%
! ACAGTGGTGCAGATATTTTA+AGG - Chr3:102298207-102298226 MsG0380017929.01.T01:intron 35.0%
! ATGAGAAAAGTGTAAGGCTT+AGG + Chr3:102295894-102295913 None:intergenic 35.0%
! ATTGTATTGGAGGAGGTTTT+TGG + Chr3:102297970-102297989 None:intergenic 35.0%
! ATTTGGGATTTAATTGGCGT+TGG - Chr3:102298327-102298346 MsG0380017929.01.T01:intron 35.0%
! GCAAAGATGAGAAAAGTGTA+AGG + Chr3:102295900-102295919 None:intergenic 35.0%
! GCATGACAGTAATTTTGTTG+TGG + Chr3:102300290-102300309 None:intergenic 35.0%
! GCGTATTACTTATGGTTCTA+TGG - Chr3:102300177-102300196 MsG0380017929.01.T01:intron 35.0%
! TAAGCCTTTGCTCTTTAAAG+AGG + Chr3:102295939-102295958 None:intergenic 35.0%
! TCAGGCAGATACTCATTTTA+GGG - Chr3:102300675-102300694 MsG0380017929.01.T01:intron 35.0%
! TCCTAAAGTATGTTGCCTTT+TGG - Chr3:102299194-102299213 MsG0380017929.01.T01:intron 35.0%
! TGCTCATGAAGTATCTAGTA+TGG - Chr3:102297476-102297495 MsG0380017929.01.T01:intron 35.0%
! TTATTACTTGTTGCCAGACA+TGG - Chr3:102297267-102297286 MsG0380017929.01.T01:intron 35.0%
! TTCAGATTGACTTCCTTGAA+TGG - Chr3:102301640-102301659 MsG0380017929.01.T01:intron 35.0%
! TTCAGGCAGATACTCATTTT+AGG - Chr3:102300674-102300693 MsG0380017929.01.T01:intron 35.0%
! TTGTATTGGAGGAGGTTTTT+GGG + Chr3:102297969-102297988 None:intergenic 35.0%
! TTTAAGACAGTCAACTCTCT+TGG - Chr3:102298602-102298621 MsG0380017929.01.T01:intron 35.0%
! TTTAGGACTATTGTAGGAAG+AGG + Chr3:102299858-102299877 None:intergenic 35.0%
! TTTGTTCAGGTTCATGTATC+AGG - Chr3:102296251-102296270 MsG0380017929.01.T01:CDS 35.0%
! TTTTCGAAAAAGAGGCAATG+TGG + Chr3:102298852-102298871 None:intergenic 35.0%
!! AAGATGATGATGGTATGTGT+TGG - Chr3:102297580-102297599 MsG0380017929.01.T01:intron 35.0%
!! AATAAAGGAAAATGACGGGT+CGG + Chr3:102301541-102301560 None:intergenic 35.0%
!! ACTCTCTTTAGGACTATTGT+AGG + Chr3:102299864-102299883 None:intergenic 35.0%
!! AGTTTTCAACTAGACTGGTT+AGG - Chr3:102296396-102296415 MsG0380017929.01.T01:intron 35.0%
!! GCATTGACTTCCAAATGAAT+CGG + Chr3:102295507-102295526 None:intergenic 35.0%
!! GTGATAAGGTACTGATGAAA+AGG - Chr3:102301168-102301187 MsG0380017929.01.T01:CDS 35.0%
!! TACCTGATATTCTGAAGTAC+CGG + Chr3:102297366-102297385 None:intergenic 35.0%
!! TACGTTTTGATACTCTTTGG+GGG + Chr3:102300349-102300368 None:intergenic 35.0%
!! TGAAAGTATGGTCTGCTTTT+TGG - Chr3:102298878-102298897 MsG0380017929.01.T01:CDS 35.0%
!! TGATTTGAAGTTGGTATTGC+TGG - Chr3:102299025-102299044 MsG0380017929.01.T01:intron 35.0%
!! TTCTACTTCACCGATTCATT+TGG - Chr3:102295494-102295513 MsG0380017929.01.T01:intron 35.0%
!! TTTATTTCTCTGAAGTCGAG+CGG + Chr3:102294337-102294356 None:intergenic 35.0%
!!! AGTTTTCAGTTGATGGATCT+TGG + Chr3:102300005-102300024 None:intergenic 35.0%
!!! AGTTTTGACTCGTGTTTCAA+AGG + Chr3:102299499-102299518 None:intergenic 35.0%
!!! ATATTTTGATGCAATCGCAC+TGG + Chr3:102299439-102299458 None:intergenic 35.0%
!!! CTTAAGCGTGTTATTTTGAC+AGG - Chr3:102299954-102299973 MsG0380017929.01.T01:intron 35.0%
!!! GATCACTATTTTGGGATTAC+AGG - Chr3:102298705-102298724 MsG0380017929.01.T01:CDS 35.0%
!!! GTTCTACTTAGGCTTTGTTT+TGG - Chr3:102297834-102297853 MsG0380017929.01.T01:intron 35.0%
!!! TACTTAGGCTTTGTTTTGGT+TGG - Chr3:102297838-102297857 MsG0380017929.01.T01:intron 35.0%
!!! TTTCTTTGTTTTAGCTCGGT+TGG + Chr3:102295698-102295717 None:intergenic 35.0%
!!! TTTTTTAGTTCCCCACAATG+AGG - Chr3:102297989-102298008 MsG0380017929.01.T01:intron 35.0%
!!! TTTTTTGGATTTCCACCTTC+GGG - Chr3:102298960-102298979 MsG0380017929.01.T01:intron 35.0%
AAAGAACCTGTTGGTACACA+CGG - Chr3:102300605-102300624 MsG0380017929.01.T01:intron 40.0%
AAAGCCTTAACGATCAATCG+CGG - Chr3:102298138-102298157 MsG0380017929.01.T01:intron 40.0%
AAAGGCCACATGTTGTAATC+GGG + Chr3:102299481-102299500 None:intergenic 40.0%
AAATTAAGAGGGACCTGAGT+TGG + Chr3:102296630-102296649 None:intergenic 40.0%
AACCAAAGCTTCATTCCCAT+TGG + Chr3:102301622-102301641 None:intergenic 40.0%
AACGGAAGCTGAAATAGCAA+AGG - Chr3:102297292-102297311 MsG0380017929.01.T01:intron 40.0%
AACTCAACGATCTTACCTCA+TGG - Chr3:102295975-102295994 MsG0380017929.01.T01:intron 40.0%
AACTGGTAATCGCAAGATCA+TGG - Chr3:102296186-102296205 MsG0380017929.01.T01:CDS 40.0%
AAGAGGATCAGGTGTATTCT+CGG + Chr3:102296915-102296934 None:intergenic 40.0%
AATTTACTCACAATCACGCG+AGG + Chr3:102294506-102294525 None:intergenic 40.0%
ACAACAATGTTATACGCCAC+AGG - Chr3:102295270-102295289 MsG0380017929.01.T01:intron 40.0%
ACATGGTTTCTTAATGTGGG+TGG - Chr3:102300531-102300550 MsG0380017929.01.T01:CDS 40.0%
ACCAACAACAAACAAATGGC+AGG + Chr3:102299078-102299097 None:intergenic 40.0%
AGAAACAGAAGACATATGGG+AGG + Chr3:102298058-102298077 None:intergenic 40.0%
AGCATATACACACCTGAAGA+AGG + Chr3:102299528-102299547 None:intergenic 40.0%
AGTAAGATGTACCGTTACTC+TGG + Chr3:102294983-102295002 None:intergenic 40.0%
AGTCCTAAAGAGAGTTAGAG+AGG - Chr3:102299869-102299888 MsG0380017929.01.T01:CDS 40.0%
ATAAAACCCTCCTCATTGTG+GGG + Chr3:102298002-102298021 None:intergenic 40.0%
ATCTTACCTCATGGCTAACA+GGG - Chr3:102295984-102296003 MsG0380017929.01.T01:intron 40.0%
CAAAGGCCACATGTTGTAAT+CGG + Chr3:102299482-102299501 None:intergenic 40.0%
CAAGTACTTGGACTTCTTCA+TGG - Chr3:102299169-102299188 MsG0380017929.01.T01:intron 40.0%
CAATCTGAAAACACCAACTC+AGG - Chr3:102296614-102296633 MsG0380017929.01.T01:intron 40.0%
CAATGGGTGATAAATTCAGC+AGG + Chr3:102295856-102295875 None:intergenic 40.0%
CATCCTCTCTAACTCTCTTT+AGG + Chr3:102299875-102299894 None:intergenic 40.0%
CGAGTGATAAAAGTAAAGGC+CGG - Chr3:102301201-102301220 MsG0380017929.01.T01:intron 40.0%
CGCTTAAGGATTATCCTATC+TGG + Chr3:102299942-102299961 None:intergenic 40.0%
CTAATCCACAGTAGCACAAA+GGG + Chr3:102294873-102294892 None:intergenic 40.0%
CTCGTCTTAACAAGAACATG+AGG + Chr3:102300869-102300888 None:intergenic 40.0%
CTTGCTCATCTAAGAAAAGG+AGG + Chr3:102298988-102299007 None:intergenic 40.0%
GACTTCCATGTAATGCTTTC+AGG - Chr3:102295667-102295686 MsG0380017929.01.T01:CDS 40.0%
GAGCAAGAATTGAGCCTTTA+TGG - Chr3:102299001-102299020 MsG0380017929.01.T01:intron 40.0%
GATTCTTGATTGTCAGGATC+TGG + Chr3:102296884-102296903 None:intergenic 40.0%
GCAAAAACTGGGCATACAAT+GGG + Chr3:102295872-102295891 None:intergenic 40.0%
GCAGTACAAGCTATGATGAT+TGG - Chr3:102297088-102297107 MsG0380017929.01.T01:intron 40.0%
GGAAGAGGAGGAAATGAAAT+TGG + Chr3:102299843-102299862 None:intergenic 40.0%
GGTGAGACACAAACACTAAA+TGG + Chr3:102296226-102296245 None:intergenic 40.0%
GTAAGGCTTAGGCAAAAACT+GGG + Chr3:102295883-102295902 None:intergenic 40.0%
GTCAAAAGATCATCTGCAAG+TGG + Chr3:102294898-102294917 None:intergenic 40.0%
GTGCATTCATATCGAAAGAG+AGG + Chr3:102294532-102294551 None:intergenic 40.0%
TAAAAGAATCTTCTGCGGTG+CGG - Chr3:102294927-102294946 MsG0380017929.01.T01:intron 40.0%
TAAACTGCATCCTCCATTCA+AGG + Chr3:102301656-102301675 None:intergenic 40.0%
TAACAAGAACATGAGGTAGG+AGG + Chr3:102300862-102300881 None:intergenic 40.0%
TACAAAGGACGATCTTCACA+AGG - Chr3:102295790-102295809 MsG0380017929.01.T01:intron 40.0%
TCTAATCCACAGTAGCACAA+AGG + Chr3:102294874-102294893 None:intergenic 40.0%
TGAAAACCGTTGATCCAGAT+AGG - Chr3:102299925-102299944 MsG0380017929.01.T01:CDS 40.0%
TGAATAAGGCCTATTCGGAT+TGG + Chr3:102294773-102294792 None:intergenic 40.0%
TGTAAGGCTTAGGCAAAAAC+TGG + Chr3:102295884-102295903 None:intergenic 40.0%
TTAAACACTGGGCCAATTCT+AGG + Chr3:102297168-102297187 None:intergenic 40.0%
TTAATAATCCGTCCCATTGC+GGG - Chr3:102298239-102298258 MsG0380017929.01.T01:intron 40.0%
TTCAGATGAAGTGCATGATG+TGG - Chr3:102296355-102296374 MsG0380017929.01.T01:CDS 40.0%
TTGGGGGGACAAAAATATAG+GGG - Chr3:102297883-102297902 MsG0380017929.01.T01:intron 40.0%
TTTATTTCATGTCCTGCCCT+TGG - Chr3:102298907-102298926 MsG0380017929.01.T01:CDS 40.0%
! AGAACCTCATTTTGCACAGT+TGG + Chr3:102296289-102296308 None:intergenic 40.0%
! AGATTGACTTCCTTGAATGG+AGG - Chr3:102301643-102301662 MsG0380017929.01.T01:intron 40.0%
! CAATTTCCAACAAAGTGCCA+AGG + Chr3:102298927-102298946 None:intergenic 40.0%
! CTTTGGGGGGACAAAAATAT+AGG - Chr3:102297881-102297900 MsG0380017929.01.T01:intron 40.0%
! GACTGGTTAGGAACTCTTAA+AGG - Chr3:102296408-102296427 MsG0380017929.01.T01:intron 40.0%
! TGCGAGTTTTGCATTTACAG+TGG - Chr3:102298191-102298210 MsG0380017929.01.T01:intron 40.0%
! TGCGATTACCAGTTGATTCA+CGG + Chr3:102296180-102296199 None:intergenic 40.0%
! TGTAGAGTATCCTGATGAAG+TGG - Chr3:102299097-102299116 MsG0380017929.01.T01:intron 40.0%
! TGTCCCTCTTTAAAGAGCAA+AGG - Chr3:102295932-102295951 MsG0380017929.01.T01:intron 40.0%
! TTTGCTCTTTAAAGAGGGAC+AGG + Chr3:102295933-102295952 None:intergenic 40.0%
!! CAATGATTCAGTGATGATGG+TGG - Chr3:102297702-102297721 MsG0380017929.01.T01:intron 40.0%
!! CAGATCCTGAAAGCATTACA+TGG + Chr3:102295675-102295694 None:intergenic 40.0%
!! GGTATTATTTTCAGGCTGCT+TGG - Chr3:102297514-102297533 MsG0380017929.01.T01:intron 40.0%
!! GTCTCACCTTTTGTTTGTTC+AGG - Chr3:102296238-102296257 MsG0380017929.01.T01:CDS 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG + Chr3:102298127-102298146 None:intergenic 40.0%
!! TGTTGATGACTATGATGACG+AGG - Chr3:102297539-102297558 MsG0380017929.01.T01:intron 40.0%
!! TTTGCTATTTCAGCTTCCGT+TGG + Chr3:102297293-102297312 None:intergenic 40.0%
!!! AGGATTTTAGTTTGAGGGTG+TGG - Chr3:102295371-102295390 MsG0380017929.01.T01:intron 40.0%
!!! GGAAGTGGCTTTTAAGATTG+AGG - Chr3:102296429-102296448 MsG0380017929.01.T01:intron 40.0%
!!! TAGGCTTTGTTTTGGTTGGA+GGG - Chr3:102297842-102297861 MsG0380017929.01.T01:intron 40.0%
!!! TGCTGATCTACTGGTTTTTG+TGG - Chr3:102295440-102295459 MsG0380017929.01.T01:CDS 40.0%
!!! TTAGGCTTTGTTTTGGTTGG+AGG - Chr3:102297841-102297860 MsG0380017929.01.T01:intron 40.0%
!!! TTTTGATTCCTTGGTGTCAG+TGG - Chr3:102298659-102298678 MsG0380017929.01.T01:intron 40.0%
AACATACCGTGTGTACCAAC+AGG + Chr3:102300614-102300633 None:intergenic 45.0%
AAGCTATCCTAGAGAGCTGT+TGG - Chr3:102294648-102294667 MsG0380017929.01.T01:intron 45.0%
AAGGCCACATGTTGTAATCG+GGG + Chr3:102299480-102299499 None:intergenic 45.0%
AAGGGCAAAAAGAACCTGGA+AGG + Chr3:102294855-102294874 None:intergenic 45.0%
AAGTAATCAACACCCCGCAA+TGG + Chr3:102298255-102298274 None:intergenic 45.0%
AATACACCTGATCCTCTTGC+TGG - Chr3:102296917-102296936 MsG0380017929.01.T01:intron 45.0%
AATCGCGGAATCCGGTATTA+TGG - Chr3:102298153-102298172 MsG0380017929.01.T01:intron 45.0%
ACAACCCCGATTACAACATG+TGG - Chr3:102299473-102299492 MsG0380017929.01.T01:intron 45.0%
ACAGAAGACATATGGGAGGA+AGG + Chr3:102298054-102298073 None:intergenic 45.0%
ACATATGGGAGGAAGGCTTA+GGG + Chr3:102298047-102298066 None:intergenic 45.0%
ACCTTCTGTCATGCAACACT+TGG - Chr3:102296669-102296688 MsG0380017929.01.T01:intron 45.0%
ACGAATAAGACAGCAGTGCT+TGG + Chr3:102295557-102295576 None:intergenic 45.0%
AGATCGTCCTTTGTATCAGC+TGG + Chr3:102295785-102295804 None:intergenic 45.0%
AGATGAAGTGCATGATGTGG+AGG - Chr3:102296358-102296377 MsG0380017929.01.T01:CDS 45.0%
AGCCAATGGGAATGAAGCTT+TGG - Chr3:102301617-102301636 MsG0380017929.01.T01:intron 45.0%
AGGAAGCGGTTTGCAAATAC+AGG - Chr3:102299141-102299160 MsG0380017929.01.T01:CDS 45.0%
AGGACTATTGTAGGAAGAGG+AGG + Chr3:102299855-102299874 None:intergenic 45.0%
AGTAATCAACACCCCGCAAT+GGG + Chr3:102298254-102298273 None:intergenic 45.0%
ATACAGGGGACTCAAGTACT+TGG - Chr3:102299157-102299176 MsG0380017929.01.T01:CDS 45.0%
ATCCTGCATGGAAATGGCTA+AGG - Chr3:102295321-102295340 MsG0380017929.01.T01:intron 45.0%
ATGTCCAGTGTTGCATGAAC+AGG + Chr3:102296729-102296748 None:intergenic 45.0%
CAACGAGGACAAAGGTCTAA+AGG + Chr3:102297758-102297777 None:intergenic 45.0%
CAATGGTGTTCCACTTCATC+AGG + Chr3:102299110-102299129 None:intergenic 45.0%
CACAAAGGGCAAAAAGAACC+TGG + Chr3:102294859-102294878 None:intergenic 45.0%
CAGACAAGAACAAGATGGAG+AGG - Chr3:102299775-102299794 MsG0380017929.01.T01:intron 45.0%
CATTGCTAGGCTGCATATCA+AGG - Chr3:102299408-102299427 MsG0380017929.01.T01:intron 45.0%
CCAACAGTGAAGATTTCCCT+TGG + Chr3:102300958-102300977 None:intergenic 45.0%
CCAAGGGAAATCTTCACTGT+TGG - Chr3:102300955-102300974 MsG0380017929.01.T01:intron 45.0%
CCATTTCCATGCAGGATAGT+AGG + Chr3:102295318-102295337 None:intergenic 45.0%
CCCTAAATTACAGGTCGACA+CGG - Chr3:102296091-102296110 MsG0380017929.01.T01:CDS 45.0%
CCTACTATCCTGCATGGAAA+TGG - Chr3:102295315-102295334 MsG0380017929.01.T01:intron 45.0%
CGTTTGGTATAGAGCTCTAC+AGG + Chr3:102300566-102300585 None:intergenic 45.0%
CTGAATACGGACCAGAGTAA+CGG - Chr3:102294969-102294988 MsG0380017929.01.T01:intron 45.0%
CTGATGAAGTGGAACACCAT+TGG - Chr3:102299108-102299127 MsG0380017929.01.T01:CDS 45.0%
CTTTAGACCTTTGTCCTCGT+TGG - Chr3:102297756-102297775 MsG0380017929.01.T01:intron 45.0%
GAAGCGGTTTGCAAATACAG+GGG - Chr3:102299143-102299162 MsG0380017929.01.T01:CDS 45.0%
GAATGGAGGATGCAGTTTAG+TGG - Chr3:102301657-102301676 MsG0380017929.01.T01:intron 45.0%
GAGCACCTTTGCCAATATTG+CGG + Chr3:102294311-102294330 None:intergenic 45.0%
GATCGTTGAGTTCTCCAATG+AGG + Chr3:102295967-102295986 None:intergenic 45.0%
GATCTTACCTCATGGCTAAC+AGG - Chr3:102295983-102296002 MsG0380017929.01.T01:intron 45.0%
GATGGAGCTTCACTAAGACT+TGG - Chr3:102297658-102297677 MsG0380017929.01.T01:intron 45.0%
GATTCCGCGATTGATCGTTA+AGG + Chr3:102298145-102298164 None:intergenic 45.0%
GGAAGCGGTTTGCAAATACA+GGG - Chr3:102299142-102299161 MsG0380017929.01.T01:CDS 45.0%
GGCAAAAACTGGGCATACAA+TGG + Chr3:102295873-102295892 None:intergenic 45.0%
GGCCGAATTAAAGAACCTGT+TGG - Chr3:102300596-102300615 MsG0380017929.01.T01:intron 45.0%
GTAGAGCTCTATACCAAACG+TGG - Chr3:102300566-102300585 MsG0380017929.01.T01:CDS 45.0%
GTATTAGATCACGATGGCGA+TGG - Chr3:102297640-102297659 MsG0380017929.01.T01:intron 45.0%
GTGGAACACCATTGGATGTT+CGG - Chr3:102299116-102299135 MsG0380017929.01.T01:CDS 45.0%
GTGTTGCATGACAGAAGGTT+TGG + Chr3:102296668-102296687 None:intergenic 45.0%
GTTGGGTTTCGGCAATTTGT+TGG - Chr3:102299720-102299739 MsG0380017929.01.T01:CDS 45.0%
GTTGTAGGTTGCTGATCTAC+TGG - Chr3:102295431-102295450 MsG0380017929.01.T01:CDS 45.0%
TAACCTCTCCGTGAATCAAC+TGG - Chr3:102296169-102296188 MsG0380017929.01.T01:CDS 45.0%
TAACGATCAATCGCGGAATC+CGG - Chr3:102298145-102298164 MsG0380017929.01.T01:intron 45.0%
TAAGAAAAGGAGGAACCCGA+AGG + Chr3:102298978-102298997 None:intergenic 45.0%
TAATAATCCGTCCCATTGCG+GGG - Chr3:102298240-102298259 MsG0380017929.01.T01:intron 45.0%
TACCTTAGCCATTTCCATGC+AGG + Chr3:102295326-102295345 None:intergenic 45.0%
TACTCATTTCCCTCTTGACC+TGG + Chr3:102297623-102297642 None:intergenic 45.0%
TATACCAAACGTGGTCTTCG+TGG - Chr3:102300575-102300594 MsG0380017929.01.T01:CDS 45.0%
TGACGTTCAGAAACCAGCAA+GGG + Chr3:102301717-102301736 None:intergenic 45.0%
TGATGCACCCATCAAATCCA+AGG - Chr3:102299680-102299699 MsG0380017929.01.T01:CDS 45.0%
TGCCGGTACTTCAGAATATC+AGG - Chr3:102297361-102297380 MsG0380017929.01.T01:intron 45.0%
TGGGTGATAAATTCAGCAGG+TGG + Chr3:102295853-102295872 None:intergenic 45.0%
TGGTTTCTTAATGTGGGTGG+TGG - Chr3:102300534-102300553 MsG0380017929.01.T01:CDS 45.0%
TGTCGACCTGTAATTTAGGG+TGG + Chr3:102296091-102296110 None:intergenic 45.0%
TTAAACGTGCATACCCGAAG+TGG - Chr3:102301515-102301534 MsG0380017929.01.T01:intron 45.0%
TTAGTGCCCTCTCATCAAAG+TGG - Chr3:102299580-102299599 MsG0380017929.01.T01:intron 45.0%
TTAGTTCCCCACAATGAGGA+GGG - Chr3:102297993-102298012 MsG0380017929.01.T01:intron 45.0%
TTCAAACCCTGTTAGCCATG+AGG + Chr3:102295993-102296012 None:intergenic 45.0%
! AACAGAGCCACTTTGATGAG+AGG + Chr3:102299590-102299609 None:intergenic 45.0%
! ACAGAGCCACTTTGATGAGA+GGG + Chr3:102299589-102299608 None:intergenic 45.0%
! ACCGTGTCGACCTGTAATTT+AGG + Chr3:102296095-102296114 None:intergenic 45.0%
! ATTTTCCTTAGCATGCTGCG+CGG - Chr3:102301229-102301248 MsG0380017929.01.T01:intron 45.0%
! CCGTGTCGACCTGTAATTTA+GGG + Chr3:102296094-102296113 None:intergenic 45.0%
! GATGAAGTAGATGGGTTTCC+AGG - Chr3:102297602-102297621 MsG0380017929.01.T01:intron 45.0%
! TCCAAGTGTTGCATGACAGA+AGG + Chr3:102296673-102296692 None:intergenic 45.0%
! TGACTATGATGACGAGGAGT+CGG - Chr3:102297545-102297564 MsG0380017929.01.T01:intron 45.0%
! TTACCAGTTGATTCACGGAG+AGG + Chr3:102296175-102296194 None:intergenic 45.0%
! TTTAGTTCCCCACAATGAGG+AGG - Chr3:102297992-102298011 MsG0380017929.01.T01:intron 45.0%
!! CAGGTACTAAAAGCACCTCA+TGG - Chr3:102295289-102295308 MsG0380017929.01.T01:intron 45.0%
!! GCCTGCCATTTGTTTGTTGT+TGG - Chr3:102299074-102299093 MsG0380017929.01.T01:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + Chr3:102298123-102298142 None:intergenic 45.0%
!! TGAGGTGCTTTTAGTACCTG+TGG + Chr3:102295289-102295308 None:intergenic 45.0%
!! TGATATTCTGAAGTACCGGC+AGG + Chr3:102297362-102297381 None:intergenic 45.0%
!! TTTTGCCCTTTGTGCTACTG+TGG - Chr3:102294865-102294884 MsG0380017929.01.T01:intron 45.0%
!!! AGGCTTTGTTTTGGTTGGAG+GGG - Chr3:102297843-102297862 MsG0380017929.01.T01:intron 45.0%
!!! ATTGGAGGAGGTTTTTGGGT+TGG + Chr3:102297965-102297984 None:intergenic 45.0%
!!! TTGGAGGAGGTTTTTGGGTT+GGG + Chr3:102297964-102297983 None:intergenic 45.0%
!!! TTTGTTTTGGTTGGAGGGGA+GGG - Chr3:102297847-102297866 MsG0380017929.01.T01:intron 45.0%
!! AAAAAAAAAAAAATCATAAA+TGG + Chr3:102300994-102301013 None:intergenic 5.0%
!! AAAAAAAAAAAATCATAAAT+GGG + Chr3:102300993-102301012 None:intergenic 5.0%
!!! TTATTTTTTATATTATAGAA+TGG - Chr3:102297066-102297085 MsG0380017929.01.T01:intron 5.0%
AAAGATGCACCTCGTCTCAG+TGG - Chr3:102296132-102296151 MsG0380017929.01.T01:CDS 50.0%
AATACCCTCTCTGCAGCATG+TGG + Chr3:102298787-102298806 None:intergenic 50.0%
AATCACGCGAGGAGGACATT+TGG + Chr3:102294495-102294514 None:intergenic 50.0%
ACACCATTGGATGTTCGGCT+AGG - Chr3:102299121-102299140 MsG0380017929.01.T01:CDS 50.0%
ACAGTCCTCGGGAAATTCAG+AGG + Chr3:102295753-102295772 None:intergenic 50.0%
ACCATGATCCACTGACACCA+AGG + Chr3:102298670-102298689 None:intergenic 50.0%
ACGAAGTAACCACTGAGACG+AGG + Chr3:102296144-102296163 None:intergenic 50.0%
AGAAAGAGGAAGCTTCCTGC+CGG - Chr3:102297344-102297363 MsG0380017929.01.T01:intron 50.0%
AGACTGTCCAACGAGGACAA+AGG + Chr3:102297766-102297785 None:intergenic 50.0%
AGAGAGGACTGTGTTCCAGT+TGG - Chr3:102299383-102299402 MsG0380017929.01.T01:CDS 50.0%
AGGGAAGGGAAGGAAGAGTT+TGG + Chr3:102298104-102298123 None:intergenic 50.0%
ATATGGGAGGAAGGCTTAGG+GGG + Chr3:102298045-102298064 None:intergenic 50.0%
ATGGAGAGGTTTCTCCATGC+TGG - Chr3:102299789-102299808 MsG0380017929.01.T01:intron 50.0%
CAGGATAGTAGGTCACCATG+AGG + Chr3:102295307-102295326 None:intergenic 50.0%
CAGGTCGACACGGTATATGA+TGG - Chr3:102296101-102296120 MsG0380017929.01.T01:CDS 50.0%
CAGGTTCATGTATCAGGTGC+AGG - Chr3:102296257-102296276 MsG0380017929.01.T01:CDS 50.0%
CATATGGGAGGAAGGCTTAG+GGG + Chr3:102298046-102298065 None:intergenic 50.0%
CTCTGGTCCGTATTCAGAAG+AGG + Chr3:102294966-102294985 None:intergenic 50.0%
CTGACGTTCAGAAACCAGCA+AGG + Chr3:102301718-102301737 None:intergenic 50.0%
CTTCCTAGCCGAACATCCAA+TGG + Chr3:102299127-102299146 None:intergenic 50.0%
GACATATGGGAGGAAGGCTT+AGG + Chr3:102298048-102298067 None:intergenic 50.0%
GTTGCATGAACAGGTCGACA+CGG + Chr3:102296720-102296739 None:intergenic 50.0%
GTTTGCGAGTTTGGAGGGAA+GGG + Chr3:102298118-102298137 None:intergenic 50.0%
TCAGAAACCAGCAAGGGTTC+TGG + Chr3:102301711-102301730 None:intergenic 50.0%
TCGACCTGTTCATGCAACAC+TGG - Chr3:102296722-102296741 MsG0380017929.01.T01:intron 50.0%
TCTTGCCTCTGAATTTCCCG+AGG - Chr3:102295745-102295764 MsG0380017929.01.T01:intron 50.0%
TGGTGACCTACTATCCTGCA+TGG - Chr3:102295309-102295328 MsG0380017929.01.T01:intron 50.0%
TGTTTGCGAGTTTGGAGGGA+AGG + Chr3:102298119-102298138 None:intergenic 50.0%
TTACTCACAATCACGCGAGG+AGG + Chr3:102294503-102294522 None:intergenic 50.0%
TTCACACGAAGACCTTGCAG+AGG + Chr3:102295466-102295485 None:intergenic 50.0%
TTGGATGTTCGGCTAGGAAG+CGG - Chr3:102299127-102299146 MsG0380017929.01.T01:CDS 50.0%
TTGTTGCCAGACATGGCCAA+CGG - Chr3:102297274-102297293 MsG0380017929.01.T01:intron 50.0%
! AGATGGGTTTCCAGGTCAAG+AGG - Chr3:102297610-102297629 MsG0380017929.01.T01:intron 50.0%
! GATGGGTTTCCAGGTCAAGA+GGG - Chr3:102297611-102297630 MsG0380017929.01.T01:intron 50.0%
! GTTCCAGTTGGCTCATTGCT+AGG - Chr3:102299395-102299414 MsG0380017929.01.T01:CDS 50.0%
! TGGTTTTTGTGGCCTCTGCA+AGG - Chr3:102295451-102295470 MsG0380017929.01.T01:CDS 50.0%
! TTTTCCTTAGCATGCTGCGC+GGG - Chr3:102301230-102301249 MsG0380017929.01.T01:intron 50.0%
!! CAACTGAAAAGCGTCCAGCA+TGG + Chr3:102299806-102299825 None:intergenic 50.0%
!! CAGTTGATGGATCTTGGCCT+TGG + Chr3:102299999-102300018 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + Chr3:102298124-102298143 None:intergenic 50.0%
!! TCCTTGGTGTCAGTGGATCA+TGG - Chr3:102298666-102298685 MsG0380017929.01.T01:intron 50.0%
!!! CTTTGTTTTGGTTGGAGGGG+AGG - Chr3:102297846-102297865 MsG0380017929.01.T01:intron 50.0%
!!! TGGAGGAGGTTTTTGGGTTG+GGG + Chr3:102297963-102297982 None:intergenic 50.0%
!!! TTGTTTTGGTTGGAGGGGAG+GGG - Chr3:102297848-102297867 MsG0380017929.01.T01:intron 50.0%
AATCTTCTGCGGTGCGGTCA+GGG - Chr3:102294933-102294952 MsG0380017929.01.T01:intron 55.0%
AGAAGCCACATGCTGCAGAG+AGG - Chr3:102298779-102298798 MsG0380017929.01.T01:intron 55.0%
AGGGGGAAGGAAAGGCTTTG+GGG - Chr3:102297866-102297885 MsG0380017929.01.T01:intron 55.0%
ATCAACACCCCGCAATGGGA+CGG + Chr3:102298250-102298269 None:intergenic 55.0%
CAGCCTAGCAATGAGCCAAC+TGG + Chr3:102299401-102299420 None:intergenic 55.0%
GAAAAGGAGGAACCCGAAGG+TGG + Chr3:102298975-102298994 None:intergenic 55.0%
GAAGCCACATGCTGCAGAGA+GGG - Chr3:102298780-102298799 MsG0380017929.01.T01:intron 55.0%
GAGGGGGAAGGAAAGGCTTT+GGG - Chr3:102297865-102297884 MsG0380017929.01.T01:intron 55.0%
GGACAAGAGACTGTCCAACG+AGG + Chr3:102297773-102297792 None:intergenic 55.0%
TATGGGAGGAAGGCTTAGGG+GGG + Chr3:102298044-102298063 None:intergenic 55.0%
TCCTGCCCTTGGCACTTTGT+TGG - Chr3:102298918-102298937 MsG0380017929.01.T01:CDS 55.0%
TCTACCTGCTCTCCAGCAAG+AGG + Chr3:102296932-102296951 None:intergenic 55.0%
TGATCCTCTTGCTGGAGAGC+AGG - Chr3:102296925-102296944 MsG0380017929.01.T01:CDS 55.0%
TGCTCTCCAGCAAGAGGATC+AGG + Chr3:102296926-102296945 None:intergenic 55.0%
! TCCAACAAAGTGCCAAGGGC+AGG + Chr3:102298922-102298941 None:intergenic 55.0%
!! AAATGACGGGTCGGCCACTT+CGG + Chr3:102301532-102301551 None:intergenic 55.0%
!!! GGAGGAGGTTTTTGGGTTGG+GGG + Chr3:102297962-102297981 None:intergenic 55.0%
!!! TGTTTTGGTTGGAGGGGAGG+GGG - Chr3:102297849-102297868 MsG0380017929.01.T01:intron 55.0%
AACAGCAGCCACTGCTGGTG+TGG + Chr3:102299898-102299917 None:intergenic 60.0%
ACACCAGCAGTGGCTGCTGT+TGG - Chr3:102299897-102299916 MsG0380017929.01.T01:CDS 60.0%
ACGAAGGCCAGAACCCTTGC+TGG - Chr3:102301701-102301720 MsG0380017929.01.T01:intron 60.0%
AGAGGATGCCACACCAGCAG+TGG - Chr3:102299887-102299906 MsG0380017929.01.T01:CDS 60.0%
CAGCTTCCGTTGGCCATGTC+TGG + Chr3:102297283-102297302 None:intergenic 60.0%
GAACCAACAGCAGCCACTGC+TGG + Chr3:102299903-102299922 None:intergenic 60.0%
GAATCTTCTGCGGTGCGGTC+AGG - Chr3:102294932-102294951 MsG0380017929.01.T01:intron 60.0%
GCGAGTTTGGAGGGAAGGGA+AGG + Chr3:102298114-102298133 None:intergenic 60.0%
GGAGGGGGAAGGAAAGGCTT+TGG - Chr3:102297864-102297883 MsG0380017929.01.T01:intron 60.0%
TCAACCCGCGCAGCATGCTA+AGG + Chr3:102301237-102301256 None:intergenic 60.0%
TCGGCCACGAAGACCACGTT+TGG + Chr3:102300582-102300601 None:intergenic 60.0%
! GGGGGAAGGAAAGGCTTTGG+GGG - Chr3:102297867-102297886 MsG0380017929.01.T01:intron 60.0%
!! AATGACGGGTCGGCCACTTC+GGG + Chr3:102301531-102301550 None:intergenic 60.0%
!! GGGGAAGGAAAGGCTTTGGG+GGG - Chr3:102297868-102297887 MsG0380017929.01.T01:intron 60.0%
!!! GGAGGTTTTTGGGTTGGGGG+TGG + Chr3:102297959-102297978 None:intergenic 60.0%
TGGAGGGGAGGGGGAAGGAA+AGG - Chr3:102297858-102297877 MsG0380017929.01.T01:intron 65.0%
TTGGTTGGAGGGGAGGGGGA+AGG - Chr3:102297853-102297872 MsG0380017929.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 102294304 102301746 102294304 ID=MsG0380017929.01;Name=MsG0380017929.01
Chr3 mRNA 102294304 102301746 102294304 ID=MsG0380017929.01.T01;Parent=MsG0380017929.01;Name=MsG0380017929.01.T01;_AED=0.38;_eAED=0.39;_QI=0|0.47|0.55|0.9|1|1|20|0|627
Chr3 exon 102301726 102301746 102301726 ID=MsG0380017929.01.T01:exon:13331;Parent=MsG0380017929.01.T01
Chr3 exon 102301536 102301611 102301536 ID=MsG0380017929.01.T01:exon:13330;Parent=MsG0380017929.01.T01
Chr3 exon 102301102 102301190 102301102 ID=MsG0380017929.01.T01:exon:13329;Parent=MsG0380017929.01.T01
Chr3 exon 102300708 102300758 102300708 ID=MsG0380017929.01.T01:exon:13328;Parent=MsG0380017929.01.T01
Chr3 exon 102300502 102300612 102300502 ID=MsG0380017929.01.T01:exon:13327;Parent=MsG0380017929.01.T01
Chr3 exon 102300239 102300361 102300239 ID=MsG0380017929.01.T01:exon:13326;Parent=MsG0380017929.01.T01
Chr3 exon 102300045 102300122 102300045 ID=MsG0380017929.01.T01:exon:13325;Parent=MsG0380017929.01.T01
Chr3 exon 102299860 102299946 102299860 ID=MsG0380017929.01.T01:exon:13324;Parent=MsG0380017929.01.T01
Chr3 exon 102299671 102299790 102299671 ID=MsG0380017929.01.T01:exon:13323;Parent=MsG0380017929.01.T01
Chr3 exon 102299330 102299414 102299330 ID=MsG0380017929.01.T01:exon:13322;Parent=MsG0380017929.01.T01
Chr3 exon 102299104 102299186 102299104 ID=MsG0380017929.01.T01:exon:13321;Parent=MsG0380017929.01.T01
Chr3 exon 102298871 102298966 102298871 ID=MsG0380017929.01.T01:exon:13320;Parent=MsG0380017929.01.T01
Chr3 exon 102298668 102298766 102298668 ID=MsG0380017929.01.T01:exon:13319;Parent=MsG0380017929.01.T01
Chr3 exon 102298459 102298522 102298459 ID=MsG0380017929.01.T01:exon:13318;Parent=MsG0380017929.01.T01
Chr3 exon 102296918 102296978 102296918 ID=MsG0380017929.01.T01:exon:13317;Parent=MsG0380017929.01.T01
Chr3 exon 102296074 102296391 102296074 ID=MsG0380017929.01.T01:exon:13316;Parent=MsG0380017929.01.T01
Chr3 exon 102295629 102295707 102295629 ID=MsG0380017929.01.T01:exon:13315;Parent=MsG0380017929.01.T01
Chr3 exon 102295424 102295487 102295424 ID=MsG0380017929.01.T01:exon:13314;Parent=MsG0380017929.01.T01
Chr3 exon 102294552 102294598 102294552 ID=MsG0380017929.01.T01:exon:13313;Parent=MsG0380017929.01.T01
Chr3 exon 102294304 102294435 102294304 ID=MsG0380017929.01.T01:exon:13312;Parent=MsG0380017929.01.T01
Chr3 CDS 102301726 102301746 102301726 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102301536 102301611 102301536 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102301102 102301190 102301102 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102300708 102300758 102300708 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102300502 102300612 102300502 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102300239 102300361 102300239 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102300045 102300122 102300045 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102299860 102299946 102299860 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102299671 102299790 102299671 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102299330 102299414 102299330 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102299104 102299186 102299104 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102298871 102298966 102298871 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102298668 102298766 102298668 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102298459 102298522 102298459 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102296918 102296978 102296918 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102296074 102296391 102296074 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102295629 102295707 102295629 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102295424 102295487 102295424 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102294552 102294598 102294552 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Chr3 CDS 102294304 102294435 102294304 ID=MsG0380017929.01.T01:cds;Parent=MsG0380017929.01.T01
Gene Sequence

>MsG0380017929.01.T01

ATGACCGCAATATTGGCAAAGATACGTGAGCAAAAAAAGGCTGCAGTCTTGAAAGAAAAGAGAATTGACTGGATCCAAATGTCCTCCTCGCGTGATTGTTCTTTTTGCCCTTTGTGCTACTGTGGATTAGAACCACTTGCAGATGATCTTTTGACGTTGTTATCTAAAAGAATCTTCTGCGGTGCGGTACTAAAAGCACCTCATGGTGACCTACTATCCTGCATGGAAATGGCTAAGGTTGCTGATCTACTGGTTTTTGTGGCCTCTGCAAGGTCTTCGTGTGAAGATACTGATTCTACTTCACCGATTCATTTGGAAGTCAATGCCTTTCTGTATTTAGGTCTCTTGGATCTGCCAACCGAGCTAAAACAAAGAAATGAACTAAAGAAGATCTGTACATCTAGTCTTGCCTCTGAATTTCCCGAGGACTGTAAATTTTATCCAGCTGATACAAAGGACGATCTTCACAAGTTCCTGTCCCTCTTTAAAGAGCAAAGGCTTAAAACTCCTCATTGGAGAACTCAACGATCTTACCTCATGGCTAACAGGGTCGACACGGTATATGATGGCAATTCTGAAAGATGCACCTCGTCTCAGTGGTTACTTCGTGCTCGTAACCTCTCCGTGAATCAACTGGTTCATGTATCAGGTGCAGGAGATTTCCAACTGTGCAAAATGAGGTTCTTAAGGATCCATTTCCTTGATTCAAGAAAAAATCAGGACTTGATGGATTCAGATGAAGTGCATGATGTGGAGGTCCCTCTTAATTTTGATATACTGAAATTCCAAACCTTCTGTCATGCAACACTTGGACATGATTTTTTTCTTACTCATATACCGTGTCATTCGTACTTAGTTCCAGATCCTGACAATCAAGAATCTTTAGTTGCCGAGAATACACCTGATCCTCTTGCTGGAGAGCAGAATGGCAGTACAAGCTATGATGATTGGCTTGTAATTCAATCAGATGTTGCCTATTATCTGACTTCACTTCACTATTTTAAGCCTAGAATTGGCCCAACATGGCCAACGGAAGCTGAAATAGCAAAGGCTGACGAAGATCAAAAGCAAAAAAAGATAAGAAAGAGGAAGCTTCCTGCCGGTACTTCAGAATATCAGGCTGCTTGGATTGTTGATGACTATGATGACGAGGAGTCGGACTGTGACAATGAAGATGATGATGTTGCCTGCCATTTGTTTGTTGTTGGTGTAGAGTATCCTGATGAAGTGGAACACCATTGGATCGTGAAGAAGCACGAAACATATGATGCACCCATCAAATCCAAGGAAGAGTTAATATTTCATGTTGGGTTTCGGCAATTTGTTGGCAGACCAACTTTCTCTAGTGAGTTCATAAACACAGACAAGAACAAGATGGAGAGGTTTCTCCATGCTGGACGCTTTTCAGTTGCTTCAATTTATGCACCAATTTCATTTCCTCCTCTTCCTACAATAGTCCTAAAGAGAGTTAGAGAGGATGCCACACCAGCAGTGGCTGCTGTTGGTTCACTGAAAACCGTTGATCCAGATAGGATAATCCTTAAGCGTGTTATTTTGACAGGCTACCCCCAAAGAGTATCAAAACGTAAAGCTTCTGTGAGACACATGTTCTATAATCCAGAGGATGTTAAATGGTTCAAGCCTGTAGAGCTCTATACCAAACGTGGTCTTCGTGGCCGAATTAAAGAACCTGTTGGTACACACGGAGCAATTAAATGTCTTCTCAACGGGGTTCTTGAACAGCGTGATACTAAAGCCAATGGGAATGAAGCTTTGGTTCAGATTGACTTCCTTGAATGGAGGATGCAGTTTAGTGGCCCGATTATTTACTTAAGAAAACGAAGGCCAGAACCCTTGCTGGTTTCTGAACGTCAGAGAAGATAA
Protein sequence

>MsG0380017929.01.T01

MTAILAKIREQKKAAVLKEKRIDWIQMSSSRDCSFCPLCYCGLEPLADDLLTLLSKRIFCGAVLKAPHGDLLSCMEMAKVADLLVFVASARSSCEDTDSTSPIHLEVNAFLYLGLLDLPTELKQRNELKKICTSSLASEFPEDCKFYPADTKDDLHKFLSLFKEQRLKTPHWRTQRSYLMANRVDTVYDGNSERCTSSQWLLRARNLSVNQLVHVSGAGDFQLCKMRFLRIHFLDSRKNQDLMDSDEVHDVEVPLNFDILKFQTFCHATLGHDFFLTHIPCHSYLVPDPDNQESLVAENTPDPLAGEQNGSTSYDDWLVIQSDVAYYLTSLHYFKPRIGPTWPTEAEIAKADEDQKQKKIRKRKLPAGTSEYQAAWIVDDYDDEESDCDNEDDDVACHLFVVGVEYPDEVEHHWIVKKHETYDAPIKSKEELIFHVGFRQFVGRPTFSSEFINTDKNKMERFLHAGRFSVASIYAPISFPPLPTIVLKRVREDATPAVAAVGSLKTVDPDRIILKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFKPVELYTKRGLRGRIKEPVGTHGAIKCLLNGVLEQRDTKANGNEALVQIDFLEWRMQFSGPIIYLRKRRPEPLLVSERQRR*