AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046449.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046449.01.T01 MTR_4g108570 61.009 218 21 4 1 154 1 218 3.44e-74 224
MsG0880046449.01.T01 MTR_4g108570 84.516 155 18 1 32 180 90 244 5.92e-74 224
MsG0880046449.01.T01 MTR_3g040400 47.511 221 49 5 1 154 1 221 1.45e-52 169
MsG0880046449.01.T01 MTR_4g115160 43.382 272 70 8 5 201 105 367 4.15e-50 166
MsG0880046449.01.T01 MTR_4g115160 40.351 228 57 6 5 158 105 327 2.98e-40 140
MsG0880046449.01.T01 MTR_4g115820 63.736 91 22 2 42 121 6 96 1.68e-31 112
MsG0880046449.01.T01 MTR_6g090475 42.708 96 35 1 29 104 5 100 1.33e-19 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046449.01.T01 AT1G18800 61.905 126 40 1 37 154 96 221 1.42e-47 156
MsG0880046449.01.T01 AT1G74560 61.417 127 41 2 37 155 100 226 3.18e-46 153
MsG0880046449.01.T01 AT1G74560 60.684 117 38 2 37 145 100 216 4.49e-40 137

Find 66 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACCATGGCCTTTCTTTC+AGG 0.071837 8:-73542064 MsG0880046449.01.T01:three_prime_UTR
GGTATATTAGCTTTCTCTTT+TGG 0.151187 8:-73541916 MsG0880046449.01.T01:three_prime_UTR
TTCGGTGAGTTTCTGCTTCT+TGG 0.176469 8:+73546466 None:intergenic
ACAGGGTAATTGATAAATTA+TGG 0.281625 8:+73541989 None:intergenic
AATTAATCAAGGATGATTTA+TGG 0.308424 8:-73542995 MsG0880046449.01.T01:CDS
TTAAGGCTTAAAGCTCCTTT+TGG 0.311912 8:-73543327 MsG0880046449.01.T01:intron
TTTGAGTATGTATTAGGCTT+TGG 0.322002 8:-73542092 MsG0880046449.01.T01:three_prime_UTR
TCTTGAGGTTGAAGATAATA+AGG 0.335371 8:-73545559 MsG0880046449.01.T01:CDS
GATAATAAGGATGTCAAATC+TGG 0.344818 8:-73545546 MsG0880046449.01.T01:CDS
TTGAGTATGTATTAGGCTTT+GGG 0.350410 8:-73542091 MsG0880046449.01.T01:three_prime_UTR
AGTTCAGCATCAACTTCTTC+GGG 0.365326 8:+73546440 None:intergenic
CTTCTCATGATTGTCGCCAT+TGG 0.369583 8:+73544537 None:intergenic
GAGTTCAGCATCAACTTCTT+CGG 0.373422 8:+73546439 None:intergenic
TTCTCATGATTGTCGCCATT+GGG 0.394389 8:+73544538 None:intergenic
AGGCAATTGAAAATGCATTA+TGG 0.398971 8:-73542139 MsG0880046449.01.T01:exon
TGAATCCTCAAAATAGGGAT+TGG 0.404769 8:+73545304 None:intergenic
AGACCATGGCCTTTCTTTCA+GGG 0.412109 8:-73542063 MsG0880046449.01.T01:three_prime_UTR
GAATCCTCAAAATAGGGATT+GGG 0.412238 8:+73545305 None:intergenic
GTTCTGTCTCCAACCATCTT+CGG 0.412928 8:+73546488 None:intergenic
GACACCAACCTGACATCAAC+AGG 0.420723 8:+73544496 None:intergenic
GAAACGCTTCATTGAACAAA+TGG 0.421400 8:-73543301 MsG0880046449.01.T01:intron
TCTCTGTTGTTCCTTCTTCA+CGG 0.428176 8:+73545258 None:intergenic
ACTAGATGAAATTACTTGAC+AGG 0.444435 8:+73541971 None:intergenic
AAGTTGATGAAGAAGAGAAA+AGG 0.450896 8:+73546542 None:intergenic
TCATCGGCATCCTCTTCATC+AGG 0.453926 8:+73542818 None:intergenic
ATGGTCGGAGAACCACTAAC+TGG 0.454059 8:+73542008 None:intergenic
GAGTTAATGCCCTGAAAGAA+AGG 0.464958 8:+73542054 None:intergenic
ATGAGAAGAAAGGGAACAAA+AGG 0.469606 8:-73544522 MsG0880046449.01.T01:CDS
AGTTGATGAAGAAGAGAAAA+GGG 0.474749 8:+73546543 None:intergenic
GGCGACAATCATGAGAAGAA+AGG 0.484157 8:-73544532 MsG0880046449.01.T01:CDS
ATGAAGCGTTTCTTTCCAAA+AGG 0.486361 8:+73543312 None:intergenic
AAAGGCCTCCTGTTGATGTC+AGG 0.487205 8:-73544504 MsG0880046449.01.T01:intron
TGGAGCTACAAGCCAGTTAG+TGG 0.505881 8:-73542020 MsG0880046449.01.T01:three_prime_UTR
GGCTTTGGGCGTGCAGACCA+TGG 0.511008 8:-73542077 MsG0880046449.01.T01:three_prime_UTR
GCAGCTTGCAGAATTAATCA+AGG 0.516175 8:-73543006 MsG0880046449.01.T01:intron
TGTTGTTCCTTCTTCACGGA+AGG 0.521205 8:+73545262 None:intergenic
ACACAGAGGCGAACCGAAGA+TGG 0.523143 8:-73546501 MsG0880046449.01.T01:exon
GCGACAATCATGAGAAGAAA+GGG 0.529007 8:-73544531 MsG0880046449.01.T01:CDS
TGAAGCTGATGATGAGGTAA+TGG 0.532222 8:-73542795 MsG0880046449.01.T01:CDS
GATCCAAGATGACCTCGAAA+AGG 0.540267 8:-73546390 MsG0880046449.01.T01:intron
TATCACTAAAATTGCACGAT+GGG 0.540851 8:+73541944 None:intergenic
TGACGAAGAGGGTGATGATG+AGG 0.543527 8:-73542163 MsG0880046449.01.T01:CDS
CTCTTCTTCATCAACTTCCG+CGG 0.546448 8:-73546536 MsG0880046449.01.T01:five_prime_UTR
CTCATCATCAGCTTCATCAT+CGG 0.555556 8:+73542802 None:intergenic
CAAGTATTTGAGTTCTCTTG+AGG 0.559002 8:-73545574 MsG0880046449.01.T01:CDS
GATCTCTTGCAATTTCTCGA+TGG 0.566477 8:+73546409 None:intergenic
ACAGGAGGAGCCTGATGAAG+AGG 0.571562 8:-73542828 MsG0880046449.01.T01:intron
AGAGGCGAACCGAAGATGGT+TGG 0.579592 8:-73546497 MsG0880046449.01.T01:exon
CATAAAATGGAAAGAAGGCA+AGG 0.587844 8:-73545222 MsG0880046449.01.T01:intron
ATGCCCTGAAAGAAAGGCCA+TGG 0.592269 8:+73542060 None:intergenic
TGATGAAGAAGAGAAAAGGG+TGG 0.594767 8:+73546546 None:intergenic
CTAGATGAAATTACTTGACA+GGG 0.597629 8:+73541972 None:intergenic
CTTGCAATTTCTCGATGGAG+AGG 0.599246 8:+73546414 None:intergenic
AGACGAGGACGACTCTGAAG+AGG 0.603159 8:-73542187 MsG0880046449.01.T01:CDS
CATTAACTCATGTCAGCAAG+TGG 0.610410 8:-73542040 MsG0880046449.01.T01:three_prime_UTR
GGTAATTGATAAATTATGGT+CGG 0.611413 8:+73541993 None:intergenic
CTCTGAAGAGGATGACGAAG+AGG 0.619244 8:-73542175 MsG0880046449.01.T01:CDS
TCTGAAGAGGATGACGAAGA+GGG 0.630726 8:-73542174 MsG0880046449.01.T01:CDS
GAAGAGGGTGATGATGAGGA+AGG 0.646490 8:-73542159 MsG0880046449.01.T01:CDS
TACATGTAGGGAATACCCAA+TGG 0.673035 8:-73544553 MsG0880046449.01.T01:intron
CGATGATGAAGCTGATGATG+AGG 0.673202 8:-73542801 MsG0880046449.01.T01:CDS
ACACTGTTGAAATAAATGAG+TGG 0.676235 8:+73542966 None:intergenic
ACCAACCTGACATCAACAGG+AGG 0.699036 8:+73544499 None:intergenic
GTATCACTAAAATTGCACGA+TGG 0.702616 8:+73541943 None:intergenic
GGCAATCTTCACTCACACAG+AGG 0.721891 8:-73546515 MsG0880046449.01.T01:five_prime_UTR
TGTGTGAGTGAAGATTGCCG+CGG 0.840253 8:+73546519 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTTAATATAAAGAATA+TGG - Chr8:73545944-73545963 MsG0880046449.01.T01:intron 10.0%
!! ATATCTATCAAATAAAAAAT+TGG + Chr8:73542857-73542876 None:intergenic 10.0%
!! ATAAAAATTATAATGCTGAT+AGG + Chr8:73543283-73543302 None:intergenic 15.0%
!! GATTAAATATGATAGTTTAA+GGG - Chr8:73543701-73543720 MsG0880046449.01.T01:intron 15.0%
!! GTTCATTAAATGTTATTATT+TGG - Chr8:73545091-73545110 MsG0880046449.01.T01:intron 15.0%
!! TAAAAATTATAATGCTGATA+GGG + Chr8:73543282-73543301 None:intergenic 15.0%
!! TGATTAAATATGATAGTTTA+AGG - Chr8:73543700-73543719 MsG0880046449.01.T01:intron 15.0%
!!! AAAATGTTTTTTTACATGAA+AGG + Chr8:73544959-73544978 None:intergenic 15.0%
!!! AAATGTTTTTTTACATGAAA+GGG + Chr8:73544958-73544977 None:intergenic 15.0%
!!! ATTGTGTTTTAATAATTATG+TGG - Chr8:73542166-73542185 MsG0880046449.01.T01:CDS 15.0%
!!! CATTTTGTATAAACATATAA+AGG + Chr8:73544081-73544100 None:intergenic 15.0%
!!! TTCACATTATTTATTGTTTT+CGG + Chr8:73546049-73546068 None:intergenic 15.0%
!! AAAAATTATAATGCTGATAG+GGG + Chr8:73543281-73543300 None:intergenic 20.0%
!! AAAATGACAAATAATGCATT+TGG + Chr8:73545552-73545571 None:intergenic 20.0%
!! AACACAATTCAAATCAAATT+AGG + Chr8:73542154-73542173 None:intergenic 20.0%
!! AATTAATCAAGGATGATTTA+TGG - Chr8:73545457-73545476 MsG0880046449.01.T01:intron 20.0%
!! ACTCAAACCAAAAAATAAAA+AGG + Chr8:73546347-73546366 None:intergenic 20.0%
!! ACTCAACAACAAAAAATATA+AGG + Chr8:73543777-73543796 None:intergenic 20.0%
!! ATTAATCCTAAACATTGTTA+AGG - Chr8:73546138-73546157 MsG0880046449.01.T01:intron 20.0%
!! ATTTGCAAATGAAAATACTT+TGG + Chr8:73544577-73544596 None:intergenic 20.0%
!! GCTTCAATTGAATAAAAAAA+CGG + Chr8:73542090-73542109 None:intergenic 20.0%
!! GTGTTTGTCATTAATTTAAA+TGG + Chr8:73546197-73546216 None:intergenic 20.0%
!! TAGGAATTGAATATTATACA+AGG + Chr8:73545422-73545441 None:intergenic 20.0%
!! TATTGCTCATAATAATTGTT+TGG - Chr8:73545732-73545751 MsG0880046449.01.T01:intron 20.0%
!! TGAAAATTATGAATTCAGTA+TGG + Chr8:73545777-73545796 None:intergenic 20.0%
!! TGATTAGAAATACAATCATT+AGG - Chr8:73543632-73543651 MsG0880046449.01.T01:intron 20.0%
!! TGTCGAAAAAAAAAAAAAAG+AGG + Chr8:73543834-73543853 None:intergenic 20.0%
!!! AATCCTTTTAAAGTAGATTT+AGG + Chr8:73544355-73544374 None:intergenic 20.0%
!!! ATAAATCATAAGTTTCAAGT+AGG - Chr8:73543448-73543467 MsG0880046449.01.T01:intron 20.0%
!!! ATTTGGAAATATGTTGTTTA+AGG - Chr8:73545108-73545127 MsG0880046449.01.T01:intron 20.0%
!!! TAAATCATAAGTTTCAAGTA+GGG - Chr8:73543449-73543468 MsG0880046449.01.T01:intron 20.0%
!!! TCTATTTTTTCCAAGAAAAA+CGG + Chr8:73545688-73545707 None:intergenic 20.0%
!!! TTTTTTTTTTTTTTCGACAG+AGG - Chr8:73543835-73543854 MsG0880046449.01.T01:intron 20.0%
! AAAAAAGGAAAAGAGGAATT+TGG + Chr8:73544231-73544250 None:intergenic 25.0%
! AAATAATATTTCTTGTTCGC+AGG - Chr8:73546238-73546257 MsG0880046449.01.T01:intron 25.0%
! AAGAATATGGAACTATAAGT+TGG - Chr8:73545957-73545976 MsG0880046449.01.T01:intron 25.0%
! AATCTGTAAATCTCACAATT+TGG + Chr8:73543737-73543756 None:intergenic 25.0%
! ACAGGGTAATTGATAAATTA+TGG + Chr8:73546466-73546485 None:intergenic 25.0%
! ACATGAAAGAACATAATAAG+TGG + Chr8:73542758-73542777 None:intergenic 25.0%
! ACTGAAAAGAAGAAGAAAAA+AGG + Chr8:73544246-73544265 None:intergenic 25.0%
! ACTTTGGTATTGTTAAATAG+CGG + Chr8:73544561-73544580 None:intergenic 25.0%
! ATTATTTGATCCACCAAATT+AGG - Chr8:73542124-73542143 MsG0880046449.01.T01:three_prime_UTR 25.0%
! CAAATTAGGTTAACCTAATT+TGG + Chr8:73542157-73542138 None:intergenic 25.0%
! CATGAAAGAACATAATAAGT+GGG + Chr8:73542757-73542776 None:intergenic 25.0%
! CTTCATTGCAATGAAAAATA+TGG - Chr8:73543014-73543033 MsG0880046449.01.T01:intron 25.0%
! GATTTGAAAAAGTTTCACAT+TGG + Chr8:73543326-73543345 None:intergenic 25.0%
! GGTAATTGATAAATTATGGT+CGG + Chr8:73546462-73546481 None:intergenic 25.0%
! GTTAGTAAAATACAACAAGA+AGG + Chr8:73543867-73543886 None:intergenic 25.0%
! GTTTATACAAAATGAACTTC+TGG - Chr8:73544087-73544106 MsG0880046449.01.T01:intron 25.0%
! TACAATTGATCAAATTTCTC+TGG + Chr8:73544690-73544709 None:intergenic 25.0%
! TCAATTAGGACATCAATAAA+GGG - Chr8:73544171-73544190 MsG0880046449.01.T01:intron 25.0%
! TCATTCTAACTTAAAGCTTT+AGG + Chr8:73546016-73546035 None:intergenic 25.0%
! TGATAACCTCAAAAAAAACT+TGG - Chr8:73546092-73546111 MsG0880046449.01.T01:intron 25.0%
! TTAGATCCTTAACAATGTTT+AGG + Chr8:73546147-73546166 None:intergenic 25.0%
! TTCAATTAAAGAGTTTGATG+CGG - Chr8:73545793-73545812 MsG0880046449.01.T01:intron 25.0%
! TTCATTAGCAAAGAAATCAA+AGG + Chr8:73545184-73545203 None:intergenic 25.0%
! TTCATTTGCAAATAATTGAC+TGG - Chr8:73544584-73544603 MsG0880046449.01.T01:intron 25.0%
! TTGTGAGATTTACAGATTAA+TGG - Chr8:73543739-73543758 MsG0880046449.01.T01:intron 25.0%
! TTTATTGATGTCCTAATTGA+CGG + Chr8:73544171-73544190 None:intergenic 25.0%
! TTTGATCAATTGTACTTGAT+TGG - Chr8:73544696-73544715 MsG0880046449.01.T01:intron 25.0%
!! AGGTGATTAACAAAAGTTTT+TGG - Chr8:73545707-73545726 MsG0880046449.01.T01:intron 25.0%
!! GGTGATTAACAAAAGTTTTT+GGG - Chr8:73545708-73545727 MsG0880046449.01.T01:intron 25.0%
!! GTTTTTCTTGGAAAAAATAG+AGG - Chr8:73545687-73545706 MsG0880046449.01.T01:intron 25.0%
!!! AACCAAATGTTGATTTTCTA+CGG - Chr8:73543082-73543101 MsG0880046449.01.T01:intron 25.0%
!!! AAGTTTTGAATCCTCAAAAT+AGG + Chr8:73543157-73543176 None:intergenic 25.0%
!!! AGTGTGACCTTTTTATTTTT+TGG - Chr8:73546337-73546356 MsG0880046449.01.T01:intron 25.0%
!!! AGTTTTGAATCCTCAAAATA+GGG + Chr8:73543156-73543175 None:intergenic 25.0%
!!! GTATATTAGCTTTCTCTTTT+GGG - Chr8:73546537-73546556 MsG0880046449.01.T01:five_prime_UTR 25.0%
!!! TTAAACTTGCTAAAAGTAGA+GGG - Chr8:73543364-73543383 MsG0880046449.01.T01:intron 25.0%
!!! TTCTGTGGAAGTATTTTTTA+AGG - Chr8:73542597-73542616 MsG0880046449.01.T01:intron 25.0%
!!! TTTTGGTTTGAGTATGTATT+AGG - Chr8:73546354-73546373 MsG0880046449.01.T01:intron 25.0%
!!! TTTTTCAAATCTACATGACA+TGG - Chr8:73543335-73543354 MsG0880046449.01.T01:intron 25.0%
!!! TTTTTTTACATGAAAGGGTT+TGG + Chr8:73544953-73544972 None:intergenic 25.0%
AAAACAAGCATCACTAATCA+AGG + Chr8:73544198-73544217 None:intergenic 30.0%
AAACAAGCATCACTAATCAA+GGG + Chr8:73544197-73544216 None:intergenic 30.0%
AAATATGAAGGTGGTGTTTA+AGG + Chr8:73545046-73545065 None:intergenic 30.0%
ACACTGTTGAAATAAATGAG+TGG + Chr8:73545489-73545508 None:intergenic 30.0%
ACATAATCCTGATACATGTA+GGG - Chr8:73543887-73543906 MsG0880046449.01.T01:intron 30.0%
ACGCCTAAATCTACTTTAAA+AGG - Chr8:73544349-73544368 MsG0880046449.01.T01:intron 30.0%
ACTAATATGCATCATGAACA+TGG + Chr8:73544038-73544057 None:intergenic 30.0%
ACTAGATGAAATTACTTGAC+AGG + Chr8:73546484-73546503 None:intergenic 30.0%
AGCTACAGTTAGAAACATAA+TGG + Chr8:73545592-73545611 None:intergenic 30.0%
AGGCAATTGAAAATGCATTA+TGG - Chr8:73546313-73546332 MsG0880046449.01.T01:intron 30.0%
ATTAATGACAAACACAGCTT+TGG - Chr8:73546202-73546221 MsG0880046449.01.T01:intron 30.0%
ATTAGGTTAACCTAATTTGG+TGG + Chr8:73542137-73542156 None:intergenic 30.0%
CAAATACTTGTACAAAGAAG+AGG + Chr8:73542987-73543006 None:intergenic 30.0%
CATAACACAATACAATACAG+AGG - Chr8:73544326-73544345 MsG0880046449.01.T01:intron 30.0%
CTAGATGAAATTACTTGACA+GGG + Chr8:73546483-73546502 None:intergenic 30.0%
GAAGAAGAAAAAAGGAAAAG+AGG + Chr8:73544238-73544257 None:intergenic 30.0%
GATAATAAGGATGTCAAATC+TGG - Chr8:73542906-73542925 MsG0880046449.01.T01:intron 30.0%
GTAGCTGATTGTAATATAAC+AGG - Chr8:73545606-73545625 MsG0880046449.01.T01:intron 30.0%
GTCAATTAGGACATCAATAA+AGG - Chr8:73544170-73544189 MsG0880046449.01.T01:intron 30.0%
GTGATATTACTTTGATTCCA+TGG + Chr8:73542682-73542701 None:intergenic 30.0%
TAAAAGTTATGCATTCAGCA+TGG + Chr8:73545839-73545858 None:intergenic 30.0%
TACTTTGATTCCATGGAAAA+TGG + Chr8:73542675-73542694 None:intergenic 30.0%
TATCACTAAAATTGCACGAT+GGG + Chr8:73546511-73546530 None:intergenic 30.0%
TCTGAACATGAAATGATTAC+TGG + Chr8:73543119-73543138 None:intergenic 30.0%
TCTTGAGGTTGAAGATAATA+AGG - Chr8:73542893-73542912 MsG0880046449.01.T01:intron 30.0%
TGAGTGATACTTTACTATTG+CGG + Chr8:73543501-73543520 None:intergenic 30.0%
TTATCTCCGTCATTATTTGA+CGG - Chr8:73544627-73544646 MsG0880046449.01.T01:intron 30.0%
TTGAGTATGTATTAGGCTTT+GGG - Chr8:73546361-73546380 MsG0880046449.01.T01:intron 30.0%
TTTATTCCAATATGACCAAG+CGG - Chr8:73544270-73544289 MsG0880046449.01.T01:intron 30.0%
TTTGAGTATGTATTAGGCTT+TGG - Chr8:73546360-73546379 MsG0880046449.01.T01:intron 30.0%
! AGCAGAAGTATAATGAGATT+AGG - Chr8:73542251-73542270 MsG0880046449.01.T01:intron 30.0%
! GTATGATTCTGGAAATTACT+CGG - Chr8:73542570-73542589 MsG0880046449.01.T01:intron 30.0%
! TATTAGTTTCCACTTGTTCT+TGG - Chr8:73544051-73544070 MsG0880046449.01.T01:intron 30.0%
! TTAATTTTCATTCGCGATCT+AGG - Chr8:73545909-73545928 MsG0880046449.01.T01:intron 30.0%
! TTGATTAGTGATGCTTGTTT+TGG - Chr8:73544197-73544216 MsG0880046449.01.T01:intron 30.0%
! TTGCCTTCTTTCCATTTTAT+GGG + Chr8:73543231-73543250 None:intergenic 30.0%
!! AAGTTGATGAAGAAGAGAAA+AGG + Chr8:73541913-73541932 None:intergenic 30.0%
!! AGTTGATGAAGAAGAGAAAA+GGG + Chr8:73541912-73541931 None:intergenic 30.0%
!! CTTAAACTTGCTAAAAGTAG+AGG - Chr8:73543363-73543382 MsG0880046449.01.T01:intron 30.0%
!! TGCAATTTTAGTGATACTCA+TGG - Chr8:73546515-73546534 MsG0880046449.01.T01:five_prime_UTR 30.0%
!! TTGGTTTGTTTGTATGATTC+TGG - Chr8:73542559-73542578 MsG0880046449.01.T01:intron 30.0%
!!! AACTTGCCAAGTTTTTTTTG+AGG + Chr8:73546101-73546120 None:intergenic 30.0%
!!! GGTATATTAGCTTTCTCTTT+TGG - Chr8:73546536-73546555 MsG0880046449.01.T01:five_prime_UTR 30.0%
!!! GGTTTTGTTCCTTTGATTAA+CGG - Chr8:73542805-73542824 MsG0880046449.01.T01:CDS 30.0%
AAACACCACCTTCATATTTG+AGG - Chr8:73545047-73545066 MsG0880046449.01.T01:intron 35.0%
AAACCTAGCAATTGTTCAGA+AGG + Chr8:73542790-73542809 None:intergenic 35.0%
AATTCTGCAAGCTGCAATAT+AGG + Chr8:73545441-73545460 None:intergenic 35.0%
ACAAACCAAACGTAACAACA+TGG + Chr8:73542548-73542567 None:intergenic 35.0%
ACAGATTCACACAACATTAC+AGG + Chr8:73543557-73543576 None:intergenic 35.0%
ACAGCATTCACAGAAAAATC+AGG + Chr8:73542318-73542337 None:intergenic 35.0%
ACATTACAGGCCTTTAATTG+TGG + Chr8:73543544-73543563 None:intergenic 35.0%
AGAAAAAGGGCAACTTACAA+GGG + Chr8:73542943-73542962 None:intergenic 35.0%
AGAAACTACTTGAGAAGAAC+AGG + Chr8:73545308-73545327 None:intergenic 35.0%
AGGGACCTATTGGAAAAAAT+TGG + Chr8:73544765-73544784 None:intergenic 35.0%
AGTCACAAAAAACCAACCTA+AGG + Chr8:73545218-73545237 None:intergenic 35.0%
ATCCGTAATCATCAAACTGT+GGG + Chr8:73544386-73544405 None:intergenic 35.0%
ATGAGAAGAAAGGGAACAAA+AGG - Chr8:73543930-73543949 MsG0880046449.01.T01:intron 35.0%
ATTACAGGCCTTTAATTGTG+GGG + Chr8:73543542-73543561 None:intergenic 35.0%
ATTGTACTTGATTGGAGGTT+TGG - Chr8:73544704-73544723 MsG0880046449.01.T01:intron 35.0%
CACATAATCCTGATACATGT+AGG - Chr8:73543886-73543905 MsG0880046449.01.T01:intron 35.0%
CATAAAATGGAAAGAAGGCA+AGG - Chr8:73543230-73543249 MsG0880046449.01.T01:intron 35.0%
CATTACAGGCCTTTAATTGT+GGG + Chr8:73543543-73543562 None:intergenic 35.0%
CTTTGATTAACGGTTCTGTT+GGG - Chr8:73542815-73542834 MsG0880046449.01.T01:CDS 35.0%
GAAACGCTTCATTGAACAAA+TGG - Chr8:73545151-73545170 MsG0880046449.01.T01:intron 35.0%
GAAAGTTACCCCACAATTAA+AGG - Chr8:73543531-73543550 MsG0880046449.01.T01:intron 35.0%
GAATCCTCAAAATAGGGATT+GGG + Chr8:73543150-73543169 None:intergenic 35.0%
GATAGTTTAAGGGAAACTGT+TGG - Chr8:73543711-73543730 MsG0880046449.01.T01:intron 35.0%
GATCAATTGTACTTGATTGG+AGG - Chr8:73544699-73544718 MsG0880046449.01.T01:intron 35.0%
GCGAAAGAATCATATTGTAG+CGG - Chr8:73544494-73544513 MsG0880046449.01.T01:intron 35.0%
GCTGATTGTAATATAACAGG+AGG - Chr8:73545609-73545628 MsG0880046449.01.T01:intron 35.0%
GTATCACTAAAATTGCACGA+TGG + Chr8:73546512-73546531 None:intergenic 35.0%
GTCACAAAAAACCAACCTAA+GGG + Chr8:73545217-73545236 None:intergenic 35.0%
GTCCGTAGAAAATCAACATT+TGG + Chr8:73543087-73543106 None:intergenic 35.0%
TAATGATGAAGCGAGTGATA+AGG - Chr8:73542216-73542235 MsG0880046449.01.T01:intron 35.0%
TATCCGTAATCATCAAACTG+TGG + Chr8:73544387-73544406 None:intergenic 35.0%
TCACAAAAAACCAACCTAAG+GGG + Chr8:73545216-73545235 None:intergenic 35.0%
TCCATAGCAACGATAGTAAT+GGG + Chr8:73544449-73544468 None:intergenic 35.0%
TGAATCCTCAAAATAGGGAT+TGG + Chr8:73543151-73543170 None:intergenic 35.0%
TGACGGAGATAATTCTTCAA+AGG + Chr8:73544619-73544638 None:intergenic 35.0%
TTCCATAGCAACGATAGTAA+TGG + Chr8:73544450-73544469 None:intergenic 35.0%
TTGTACTTGATTGGAGGTTT+GGG - Chr8:73544705-73544724 MsG0880046449.01.T01:intron 35.0%
TTGTGTGAATCTGTTCACTT+GGG - Chr8:73543563-73543582 MsG0880046449.01.T01:intron 35.0%
TTGTTGAGTGATCCATATAG+TGG - Chr8:73543788-73543807 MsG0880046449.01.T01:intron 35.0%
! AAAAAAACGGTACCTTTTCG+AGG + Chr8:73542077-73542096 None:intergenic 35.0%
! AAAACGAAACGGAATGGTTT+TGG - Chr8:73542644-73542663 MsG0880046449.01.T01:intron 35.0%
! AAGACCTCTAGAAGAACAAA+TGG - Chr8:73543665-73543684 MsG0880046449.01.T01:intron 35.0%
! AAGAGGAGTTTTCAGAAGAA+GGG + Chr8:73542970-73542989 None:intergenic 35.0%
! AAGTATCACTCAAGTTTTGC+AGG - Chr8:73543509-73543528 MsG0880046449.01.T01:intron 35.0%
! AGACCTCTAGAAGAACAAAT+GGG - Chr8:73543666-73543685 MsG0880046449.01.T01:intron 35.0%
! ATCAACTTCTTCGGGATTTT+CGG + Chr8:73542007-73542026 None:intergenic 35.0%
! ATCCCACAGTTTGATGATTA+CGG - Chr8:73544381-73544400 MsG0880046449.01.T01:intron 35.0%
! ATGAAGCGTTTCTTTCCAAA+AGG + Chr8:73545143-73545162 None:intergenic 35.0%
! CAAGTATTTGAGTTCTCTTG+AGG - Chr8:73542878-73542897 MsG0880046449.01.T01:intron 35.0%
! CTTGCCTTCTTTCCATTTTA+TGG + Chr8:73543232-73543251 None:intergenic 35.0%
! GTTTTCCATGTTGTTACGTT+TGG - Chr8:73542540-73542559 MsG0880046449.01.T01:intron 35.0%
! TAGTAATGGGAAAGTTGTTC+AGG + Chr8:73544436-73544455 None:intergenic 35.0%
! TGCCTTCTTTCCATTTTATG+GGG + Chr8:73543230-73543249 None:intergenic 35.0%
! TTAAGGCTTAAAGCTCCTTT+TGG - Chr8:73545125-73545144 MsG0880046449.01.T01:intron 35.0%
! TTTGTTATCATGGACAAAGC+TGG + Chr8:73544127-73544146 None:intergenic 35.0%
!! AACTCGTGAGTTTGTTATCA+TGG + Chr8:73544137-73544156 None:intergenic 35.0%
!! AATGGAAGTTCCGTTTTTCT+TGG - Chr8:73545675-73545694 MsG0880046449.01.T01:intron 35.0%
!! GTGAAAAGTATTGACCTTTC+AGG - Chr8:73544867-73544886 MsG0880046449.01.T01:intron 35.0%
!! TTTGGTTTCACCATTTTCCA+TGG - Chr8:73542662-73542681 MsG0880046449.01.T01:intron 35.0%
!!! GGGTACCAATTTTTTCCAAT+AGG - Chr8:73544757-73544776 MsG0880046449.01.T01:intron 35.0%
AATGGAAAGAAGGCAAGGTA+AGG - Chr8:73543235-73543254 MsG0880046449.01.T01:intron 40.0%
AATTAGTCAAGTAGAGACCG+TGG + Chr8:73545358-73545377 None:intergenic 40.0%
ACCCCCATAAAATGGAAAGA+AGG - Chr8:73543225-73543244 MsG0880046449.01.T01:intron 40.0%
AGAAGAAGGGGAAGAGAAAA+AGG + Chr8:73542957-73542976 None:intergenic 40.0%
AGAGACTGCTCTTGACAATA+TGG + Chr8:73544822-73544841 None:intergenic 40.0%
AGCGGAAGGTAAGGAAATAT+TGG - Chr8:73544288-73544307 MsG0880046449.01.T01:intron 40.0%
AGTTCAGCATCAACTTCTTC+GGG + Chr8:73542015-73542034 None:intergenic 40.0%
ATATTTCCTTACCTTCCGCT+TGG + Chr8:73544288-73544307 None:intergenic 40.0%
ATGGAAAGAAGGCAAGGTAA+GGG - Chr8:73543236-73543255 MsG0880046449.01.T01:intron 40.0%
ATTGATGTCCTAATTGACGG+CGG + Chr8:73544168-73544187 None:intergenic 40.0%
CACAAAAAACCAACCTAAGG+GGG + Chr8:73545215-73545234 None:intergenic 40.0%
CATCAAAGACGTATCCTGAA+AGG + Chr8:73544884-73544903 None:intergenic 40.0%
CATTAACTCATGTCAGCAAG+TGG - Chr8:73546412-73546431 MsG0880046449.01.T01:CDS 40.0%
CCAACAGAACCGTTAATCAA+AGG + Chr8:73542817-73542836 None:intergenic 40.0%
CCTTTGATTAACGGTTCTGT+TGG - Chr8:73542814-73542833 MsG0880046449.01.T01:CDS 40.0%
CTCAGTGAACTACTGAATGA+GGG - Chr8:73542461-73542480 MsG0880046449.01.T01:intron 40.0%
CTCATCATCAGCTTCATCAT+CGG + Chr8:73545653-73545672 None:intergenic 40.0%
CTCATTCAGTAGTTCACTGA+GGG + Chr8:73542462-73542481 None:intergenic 40.0%
CTTTCAGGATACGTCTTTGA+TGG - Chr8:73544882-73544901 MsG0880046449.01.T01:intron 40.0%
GAAGAAGGGGAAGAGAAAAA+GGG + Chr8:73542956-73542975 None:intergenic 40.0%
GAGAAAAAGGGCAACTTACA+AGG + Chr8:73542944-73542963 None:intergenic 40.0%
GAGACTGCTCTTGACAATAT+GGG + Chr8:73544821-73544840 None:intergenic 40.0%
GAGTTAATGCCCTGAAAGAA+AGG + Chr8:73546401-73546420 None:intergenic 40.0%
GAGTTCAGCATCAACTTCTT+CGG + Chr8:73542016-73542035 None:intergenic 40.0%
GATATGTGCTGTGACATTTG+TGG - Chr8:73545252-73545271 MsG0880046449.01.T01:CDS 40.0%
GATCTCTTGCAATTTCTCGA+TGG + Chr8:73542046-73542065 None:intergenic 40.0%
GCAGCTTGCAGAATTAATCA+AGG - Chr8:73545446-73545465 MsG0880046449.01.T01:intron 40.0%
GCGACAATCATGAGAAGAAA+GGG - Chr8:73543921-73543940 MsG0880046449.01.T01:intron 40.0%
GCGGAAGGTAAGGAAATATT+GGG - Chr8:73544289-73544308 MsG0880046449.01.T01:intron 40.0%
GCTTCTGTCCTCAAATATGA+AGG + Chr8:73545058-73545077 None:intergenic 40.0%
GTTGTGTGAATCTGTTCACT+TGG - Chr8:73543562-73543581 MsG0880046449.01.T01:intron 40.0%
TACATGTAGGGAATACCCAA+TGG - Chr8:73543899-73543918 MsG0880046449.01.T01:intron 40.0%
TCCCATTACTATCGTTGCTA+TGG - Chr8:73544445-73544464 MsG0880046449.01.T01:intron 40.0%
TCGAACTTGATGAGATGCAT+GGG - Chr8:73543401-73543420 MsG0880046449.01.T01:intron 40.0%
TCTAGAAGAACAAATGGGGA+GGG - Chr8:73543671-73543690 MsG0880046449.01.T01:intron 40.0%
TCTCTGTTGTTCCTTCTTCA+CGG + Chr8:73543197-73543216 None:intergenic 40.0%
TCTGTCCTCAAATATGAAGG+TGG + Chr8:73545055-73545074 None:intergenic 40.0%
TGAATCCACCCGTCAAATAT+GGG + Chr8:73544658-73544677 None:intergenic 40.0%
TGAGATGCATGGGAAAATAG+TGG - Chr8:73543411-73543430 MsG0880046449.01.T01:intron 40.0%
TGCAAAGCACACAAGTTTAC+TGG + Chr8:73544789-73544808 None:intergenic 40.0%
TGTGTGAATCTGTTCACTTG+GGG - Chr8:73543564-73543583 MsG0880046449.01.T01:intron 40.0%
TTCTCATGATTGTCGCCATT+GGG + Chr8:73543917-73543936 None:intergenic 40.0%
TTGAATCCACCCGTCAAATA+TGG + Chr8:73544659-73544678 None:intergenic 40.0%
TTGCCTTCTGAACAATTGCT+AGG - Chr8:73542784-73542803 MsG0880046449.01.T01:CDS 40.0%
TTTCGCTATCAGTGCAATAG+CGG + Chr8:73544480-73544499 None:intergenic 40.0%
! ACTTTTACCTTCCGTGAAGA+AGG - Chr8:73543183-73543202 MsG0880046449.01.T01:intron 40.0%
! AGAGGAGTTTTCAGAAGAAG+GGG + Chr8:73542969-73542988 None:intergenic 40.0%
! CAATCCCAATCCCTATTTTG+AGG - Chr8:73543143-73543162 MsG0880046449.01.T01:intron 40.0%
! GAAGAGGAGTTTTCAGAAGA+AGG + Chr8:73542971-73542990 None:intergenic 40.0%
! GACCTCTAGAAGAACAAATG+GGG - Chr8:73543667-73543686 MsG0880046449.01.T01:intron 40.0%
! GCCTTCTTTCCATTTTATGG+GGG + Chr8:73543229-73543248 None:intergenic 40.0%
! TATTTGACGGGTGGATTCAA+TGG - Chr8:73544659-73544678 MsG0880046449.01.T01:intron 40.0%
! TGAAGCTGATGATGAGGTAA+TGG - Chr8:73545657-73545676 MsG0880046449.01.T01:intron 40.0%
! TGGTGGATGTTTAAGAGTCT+GGG - Chr8:73544737-73544756 MsG0880046449.01.T01:intron 40.0%
!! ATGGTGGATGTTTAAGAGTC+TGG - Chr8:73544736-73544755 MsG0880046449.01.T01:intron 40.0%
!! GAAAGTTGTTCAGGTTGTTG+AGG + Chr8:73544427-73544446 None:intergenic 40.0%
!!! ATCCCTGTCTTTGTTTTCCA+CGG - Chr8:73545338-73545357 MsG0880046449.01.T01:intron 40.0%
AAAGGTCAGCCAAGAACAAG+TGG + Chr8:73544063-73544082 None:intergenic 45.0%
AAATTACTCGGCGTGTTCTG+TGG - Chr8:73542582-73542601 MsG0880046449.01.T01:intron 45.0%
AAGCACACAAGTTTACTGGC+AGG + Chr8:73544785-73544804 None:intergenic 45.0%
AGACCATGGCCTTTCTTTCA+GGG - Chr8:73546389-73546408 MsG0880046449.01.T01:intron 45.0%
AGACCGTGGAAAACAAAGAC+AGG + Chr8:73545344-73545363 None:intergenic 45.0%
AGAGGTCTTTACCATGAGCT+TGG + Chr8:73543816-73543835 None:intergenic 45.0%
AGCACACAAGTTTACTGGCA+GGG + Chr8:73544784-73544803 None:intergenic 45.0%
AGGAAGCCGTTTACGATAAG+CGG - Chr8:73542271-73542290 MsG0880046449.01.T01:intron 45.0%
ATATGACCAAGCGGAAGGTA+AGG - Chr8:73544279-73544298 MsG0880046449.01.T01:intron 45.0%
ATGAATGCAGTTTCCCCCTT+AGG - Chr8:73545199-73545218 MsG0880046449.01.T01:intron 45.0%
ATGAGCTTGGGTCCACTATA+TGG + Chr8:73543803-73543822 None:intergenic 45.0%
CCTCAGTGAACTACTGAATG+AGG - Chr8:73542460-73542479 MsG0880046449.01.T01:intron 45.0%
CCTCATTCAGTAGTTCACTG+AGG + Chr8:73542463-73542482 None:intergenic 45.0%
CTCCCCATTTGTTCTTCTAG+AGG + Chr8:73543672-73543691 None:intergenic 45.0%
CTCCGTCATTATTTGACGGA+TGG - Chr8:73544631-73544650 MsG0880046449.01.T01:intron 45.0%
CTCGAACTTGATGAGATGCA+TGG - Chr8:73543400-73543419 MsG0880046449.01.T01:intron 45.0%
CTCGTTCCGCTTATCGTAAA+CGG + Chr8:73542280-73542299 None:intergenic 45.0%
CTCTTCTTCATCAACTTCCG+CGG - Chr8:73541916-73541935 MsG0880046449.01.T01:three_prime_UTR 45.0%
CTTCTAGCAGCGATTTCTGA+AGG - Chr8:73545872-73545891 MsG0880046449.01.T01:intron 45.0%
CTTCTCATGATTGTCGCCAT+TGG + Chr8:73543918-73543937 None:intergenic 45.0%
CTTGCAATTTCTCGATGGAG+AGG + Chr8:73542041-73542060 None:intergenic 45.0%
GAATCCACCCGTCAAATATG+GGG + Chr8:73544657-73544676 None:intergenic 45.0%
GACCGTGGAAAACAAAGACA+GGG + Chr8:73545343-73545362 None:intergenic 45.0%
GAGGTCTTTACCATGAGCTT+GGG + Chr8:73543815-73543834 None:intergenic 45.0%
GATCCAAGATGACCTCGAAA+AGG - Chr8:73542062-73542081 MsG0880046449.01.T01:three_prime_UTR 45.0%
GGCCATCCGTCAAATAATGA+CGG + Chr8:73544636-73544655 None:intergenic 45.0%
GGCGACAATCATGAGAAGAA+AGG - Chr8:73543920-73543939 MsG0880046449.01.T01:intron 45.0%
GGGTATTCCCTACATGTATC+AGG + Chr8:73543897-73543916 None:intergenic 45.0%
GTGGACAAAACGAAACGGAA+TGG - Chr8:73542638-73542657 MsG0880046449.01.T01:intron 45.0%
GTGTGAATCTGTTCACTTGG+GGG - Chr8:73543565-73543584 MsG0880046449.01.T01:intron 45.0%
GTTCTGTCTCCAACCATCTT+CGG + Chr8:73541967-73541986 None:intergenic 45.0%
TACCTTCCGCTTGGTCATAT+TGG + Chr8:73544279-73544298 None:intergenic 45.0%
TCACTGCTACCCCCATAAAA+TGG - Chr8:73543217-73543236 MsG0880046449.01.T01:intron 45.0%
TCTGAAGAGGATGACGAAGA+GGG - Chr8:73546278-73546297 MsG0880046449.01.T01:intron 45.0%
TGTTGTTCCTTCTTCACGGA+AGG + Chr8:73543193-73543212 None:intergenic 45.0%
TTCAGTAGTTCACTGAGGGT+AGG + Chr8:73542458-73542477 None:intergenic 45.0%
TTCCAATATGACCAAGCGGA+AGG - Chr8:73544274-73544293 MsG0880046449.01.T01:intron 45.0%
TTCGGTGAGTTTCTGCTTCT+TGG + Chr8:73541989-73542008 None:intergenic 45.0%
TTGAGGTCTGGAAACGAACA+GGG + Chr8:73544410-73544429 None:intergenic 45.0%
TTGTTCGCAGGAAAAAGACG+AGG - Chr8:73546250-73546269 MsG0880046449.01.T01:intron 45.0%
! ATAGCGGAGCTATTGTGTAG+CGG + Chr8:73544545-73544564 None:intergenic 45.0%
! CGATGATGAAGCTGATGATG+AGG - Chr8:73545651-73545670 MsG0880046449.01.T01:intron 45.0%
! CTCTAGAAGAACAAATGGGG+AGG - Chr8:73543670-73543689 MsG0880046449.01.T01:intron 45.0%
! TGATTGGAGGTTTGGGATCA+GGG - Chr8:73544712-73544731 MsG0880046449.01.T01:intron 45.0%
! TTGATTGGAGGTTTGGGATC+AGG - Chr8:73544711-73544730 MsG0880046449.01.T01:intron 45.0%
!! ATATAGTGGACCCAAGCTCA+TGG - Chr8:73543802-73543821 MsG0880046449.01.T01:intron 45.0%
!! CGATGAGAGTATCTTATGCC+TGG - Chr8:73544908-73544927 MsG0880046449.01.T01:intron 45.0%
!! GTACCTTTTCGAGGTCATCT+TGG + Chr8:73542068-73542087 None:intergenic 45.0%
!! TTGTTCAGGTTGTTGAGGTC+TGG + Chr8:73544422-73544441 None:intergenic 45.0%
AAAGGCCTCCTGTTGATGTC+AGG - Chr8:73543948-73543967 MsG0880046449.01.T01:intron 50.0%
ACCAACCTGACATCAACAGG+AGG + Chr8:73543956-73543975 None:intergenic 50.0%
ACGGATGGCCCCATATTTGA+CGG - Chr8:73544646-73544665 MsG0880046449.01.T01:intron 50.0%
ATGCAGTTTCCCCCTTAGGT+TGG - Chr8:73545203-73545222 MsG0880046449.01.T01:intron 50.0%
ATGCCCTGAAAGAAAGGCCA+TGG + Chr8:73546395-73546414 None:intergenic 50.0%
ATGGTCGGAGAACCACTAAC+TGG + Chr8:73546447-73546466 None:intergenic 50.0%
CAGACCATGGCCTTTCTTTC+AGG - Chr8:73546388-73546407 MsG0880046449.01.T01:intron 50.0%
CATGGACAAAGCTGGAGAGT+GGG + Chr8:73544119-73544138 None:intergenic 50.0%
CCAGCGTGGACAAAACGAAA+CGG - Chr8:73542633-73542652 MsG0880046449.01.T01:intron 50.0%
GAAGAACAAATGGGGAGGGT+TGG - Chr8:73543675-73543694 MsG0880046449.01.T01:intron 50.0%
GACACCAACCTGACATCAAC+AGG + Chr8:73543959-73543978 None:intergenic 50.0%
GGCAATCTTCACTCACACAG+AGG - Chr8:73541937-73541956 MsG0880046449.01.T01:three_prime_UTR 50.0%
GTAGTTCACTGAGGGTAGGA+TGG + Chr8:73542454-73542473 None:intergenic 50.0%
GTTGAGGTCTGGAAACGAAC+AGG + Chr8:73544411-73544430 None:intergenic 50.0%
GTTTACTGGCAGGGACCTAT+TGG + Chr8:73544775-73544794 None:intergenic 50.0%
TAATCCTGCCGCCGTCAATT+AGG - Chr8:73544157-73544176 MsG0880046449.01.T01:intron 50.0%
TAGCGGAGCTATTGTGTAGC+GGG + Chr8:73544544-73544563 None:intergenic 50.0%
TCATCGGCATCCTCTTCATC+AGG + Chr8:73545637-73545656 None:intergenic 50.0%
TCATGGACAAAGCTGGAGAG+TGG + Chr8:73544120-73544139 None:intergenic 50.0%
TGCGGTGATACTGTGCATAC+TGG - Chr8:73545811-73545830 MsG0880046449.01.T01:intron 50.0%
TGGAGCTACAAGCCAGTTAG+TGG - Chr8:73546432-73546451 MsG0880046449.01.T01:CDS 50.0%
TGTGTGAGTGAAGATTGCCG+CGG + Chr8:73541936-73541955 None:intergenic 50.0%
! CGTTTCGTTTTGTCCACGCT+GGG + Chr8:73542635-73542654 None:intergenic 50.0%
! CTCTGAAGAGGATGACGAAG+AGG - Chr8:73546277-73546296 MsG0880046449.01.T01:intron 50.0%
! GAAGAGGGTGATGATGAGGA+AGG - Chr8:73546293-73546312 MsG0880046449.01.T01:intron 50.0%
! TGACGAAGAGGGTGATGATG+AGG - Chr8:73546289-73546308 MsG0880046449.01.T01:intron 50.0%
!! GAGAGTATCTTATGCCTGGC+TGG - Chr8:73544912-73544931 MsG0880046449.01.T01:intron 50.0%
!!! GTAGTAGTTTTGACCCAGCG+TGG - Chr8:73542619-73542638 MsG0880046449.01.T01:intron 50.0%
ACACAGAGGCGAACCGAAGA+TGG - Chr8:73541951-73541970 MsG0880046449.01.T01:three_prime_UTR 55.0%
ACAGGAGGAGCCTGATGAAG+AGG - Chr8:73545624-73545643 MsG0880046449.01.T01:intron 55.0%
ACTTGGGGGTTGCACAAGAC+AGG - Chr8:73543579-73543598 MsG0880046449.01.T01:intron 55.0%
AGAGGCGAACCGAAGATGGT+TGG - Chr8:73541955-73541974 MsG0880046449.01.T01:three_prime_UTR 55.0%
AGAGTAATGCACAGCCAGCC+AGG + Chr8:73544929-73544948 None:intergenic 55.0%
AGCGGAGCTATTGTGTAGCG+GGG + Chr8:73544543-73544562 None:intergenic 55.0%
ATGGCCCCATATTTGACGGG+TGG - Chr8:73544650-73544669 MsG0880046449.01.T01:intron 55.0%
ATGTCCTAATTGACGGCGGC+AGG + Chr8:73544164-73544183 None:intergenic 55.0%
CGGATGGCCCCATATTTGAC+GGG - Chr8:73544647-73544666 MsG0880046449.01.T01:intron 55.0%
CTTGGGGGTTGCACAAGACA+GGG - Chr8:73543580-73543599 MsG0880046449.01.T01:intron 55.0%
GCCTCCTGTTGATGTCAGGT+TGG - Chr8:73543952-73543971 MsG0880046449.01.T01:intron 55.0%
TGTGGCTGACATTCACGACG+AGG - Chr8:73545270-73545289 MsG0880046449.01.T01:CDS 55.0%
! AGACGAGGACGACTCTGAAG+AGG - Chr8:73546265-73546284 MsG0880046449.01.T01:intron 55.0%
! CCGTTTCGTTTTGTCCACGC+TGG + Chr8:73542636-73542655 None:intergenic 55.0%
! GGAGGTTTGGGATCAGGGTA+TGG - Chr8:73544717-73544736 MsG0880046449.01.T01:intron 55.0%
! GGTTTGGGATCAGGGTATGG+TGG - Chr8:73544720-73544739 MsG0880046449.01.T01:intron 55.0%
!! GGCTTTGGGCGTGCAGACCA+TGG - Chr8:73546375-73546394 MsG0880046449.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 73541908 73546566 73541908 ID=MsG0880046449.01;Name=MsG0880046449.01
Chr8 mRNA 73541908 73546566 73541908 ID=MsG0880046449.01.T01;Parent=MsG0880046449.01;Name=MsG0880046449.01.T01;_AED=0.40;_eAED=0.40;_QI=62|0.42|0.62|0.87|1|1|8|244|201
Chr8 exon 73541908 73542214 73541908 ID=MsG0880046449.01.T01:exon:7971;Parent=MsG0880046449.01.T01
Chr8 exon 73542766 73542846 73542766 ID=MsG0880046449.01.T01:exon:7970;Parent=MsG0880046449.01.T01
Chr8 exon 73542968 73543024 73542968 ID=MsG0880046449.01.T01:exon:7969;Parent=MsG0880046449.01.T01
Chr8 exon 73543302 73543344 73543302 ID=MsG0880046449.01.T01:exon:7968;Parent=MsG0880046449.01.T01
Chr8 exon 73544505 73544566 73544505 ID=MsG0880046449.01.T01:exon:7967;Parent=MsG0880046449.01.T01
Chr8 exon 73545223 73545336 73545223 ID=MsG0880046449.01.T01:exon:7966;Parent=MsG0880046449.01.T01
Chr8 exon 73545530 73545601 73545530 ID=MsG0880046449.01.T01:exon:7965;Parent=MsG0880046449.01.T01
Chr8 exon 73546391 73546566 73546391 ID=MsG0880046449.01.T01:exon:7964;Parent=MsG0880046449.01.T01
Chr8 five_prime_UTR 73546505 73546566 73546505 ID=MsG0880046449.01.T01:five_prime_utr;Parent=MsG0880046449.01.T01
Chr8 CDS 73546391 73546504 73546391 ID=MsG0880046449.01.T01:cds;Parent=MsG0880046449.01.T01
Chr8 CDS 73545530 73545601 73545530 ID=MsG0880046449.01.T01:cds;Parent=MsG0880046449.01.T01
Chr8 CDS 73545223 73545336 73545223 ID=MsG0880046449.01.T01:cds;Parent=MsG0880046449.01.T01
Chr8 CDS 73544505 73544566 73544505 ID=MsG0880046449.01.T01:cds;Parent=MsG0880046449.01.T01
Chr8 CDS 73543302 73543344 73543302 ID=MsG0880046449.01.T01:cds;Parent=MsG0880046449.01.T01
Chr8 CDS 73542968 73543024 73542968 ID=MsG0880046449.01.T01:cds;Parent=MsG0880046449.01.T01
Chr8 CDS 73542766 73542846 73542766 ID=MsG0880046449.01.T01:cds;Parent=MsG0880046449.01.T01
Chr8 CDS 73542152 73542214 73542152 ID=MsG0880046449.01.T01:cds;Parent=MsG0880046449.01.T01
Chr8 three_prime_UTR 73541908 73542151 73541908 ID=MsG0880046449.01.T01:three_prime_utr;Parent=MsG0880046449.01.T01
Gene Sequence

>MsG0880046449.01.T01

ATGGTTGGAGACAGAACCAAGAAGCAGAAACTCACCGAAAATCCCGAAGAAGTTGATGCTGAACTCATCCTCTCCATCGAGAAATTGCAAGAGATCCAAGATGACCTCGAAAAGATATTCAAGTATTTGAGTTCTCTTGAGGTTGAAGATAATAAGGATGTCAAATCTGGATACACAATCACCCTTAATTTCAATCCCAATCCCTATTTTGAGGATTCAAAACTTTCAAAGACTTTTACCTTCCGTGAAGAAGGAACAACAGAGATCACTGCTACCCCCATAAAATGGAAAGAAGGCAAGGGAATACCCAATGGCGACAATCATGAGAAGAAAGGGAACAAAAGGCCTCCTGTTGATGTCAGGCTTAAAGCTCCTTTTGGAAAGAAACGCTTCATTGAACAAATGCTTGCAGAATTAATCAAGGATGATTTATGGTCAAATCCACTCATTTATTTCAACAGTGAGGAGCCTGATGAAGAGGATGCCGATGATGAAGCTGATGATGAGGTAATGGAAGTTCCGTTTTTCTTGGAAAAAATAGAGGAAAAAGACGAGGACGACTCTGAAGAGGATGACGAAGAGGGTGATGATGAGGAAGGCAATTGA
Protein sequence

>MsG0880046449.01.T01

MVGDRTKKQKLTENPEEVDAELILSIEKLQEIQDDLEKIFKYLSSLEVEDNKDVKSGYTITLNFNPNPYFEDSKLSKTFTFREEGTTEITATPIKWKEGKGIPNGDNHEKKGNKRPPVDVRLKAPFGKKRFIEQMLAELIKDDLWSNPLIYFNSEEPDEEDADDEADDEVMEVPFFLEKIEEKDEDDSEEDDEEGDDEEGN*