AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040887.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040887.01.T01 MTR_7g100430 99.141 582 5 0 1 582 1 582 0.0 1182
MsG0780040887.01.T01 MTR_1g115575 73.358 548 139 4 41 582 47 593 0.0 808
MsG0780040887.01.T01 MTR_2g096190 45.155 516 243 7 50 548 10 502 4.57e-129 389
MsG0780040887.01.T01 MTR_4g062100 44.814 511 244 8 56 551 19 506 2.21e-127 385
MsG0780040887.01.T01 MTR_7g117620 40.892 538 287 4 55 582 30 546 7.22e-118 360
MsG0780040887.01.T01 MTR_1g032100 43.542 480 253 6 120 582 53 531 1.77e-117 359
MsG0780040887.01.T01 MTR_7g100390 40.445 539 283 6 61 582 3 520 3.60e-110 340
MsG0780040887.01.T01 MTR_8g105260 40.083 484 264 7 120 582 60 538 5.00e-108 335
MsG0780040887.01.T01 MTR_2g101310 26.829 492 284 12 157 575 135 623 6.41e-36 143
MsG0780040887.01.T01 MTR_2g101310 25.991 227 132 4 112 303 24 249 1.14e-14 77.4
MsG0780040887.01.T01 MTR_1g069110 26.371 383 239 9 162 512 18 389 1.20e-22 101
MsG0780040887.01.T01 MTR_2g101320 25.408 429 282 10 122 514 137 563 1.27e-22 102
MsG0780040887.01.T01 MTR_2g101320 27.053 207 147 3 157 359 135 341 1.45e-14 77.4
MsG0780040887.01.T01 MTR_2g101320 25.207 242 157 5 106 335 18 247 3.14e-14 76.3
MsG0780040887.01.T01 MTR_2g101310 25.613 367 203 9 157 453 135 501 5.12e-19 90.9
MsG0780040887.01.T01 MTR_2g101310 25.991 227 132 4 112 303 24 249 3.13e-14 75.9
MsG0780040887.01.T01 MTR_3g105650 24.208 442 272 16 124 561 38 420 1.85e-18 88.6
MsG0780040887.01.T01 MTR_5g043640 34.463 177 111 4 124 298 20 193 4.95e-17 81.3
MsG0780040887.01.T01 MTR_8g073260 25.201 373 206 14 69 437 8 311 2.24e-16 82.4
MsG0780040887.01.T01 MTR_5g085810 24.286 420 256 14 162 524 273 687 2.75e-16 82.8
MsG0780040887.01.T01 MTR_8g080080 30.918 207 123 6 162 348 189 395 1.95e-15 80.1
MsG0780040887.01.T01 MTR_8g080080 26.374 273 169 10 65 316 133 394 5.64e-12 68.9
MsG0780040887.01.T01 MTR_6g027840 31.000 200 133 4 116 315 170 364 1.31e-14 77.0
MsG0780040887.01.T01 MTR_6g027840 30.918 207 135 6 111 314 129 330 1.42e-13 73.9
MsG0780040887.01.T01 MTR_3g058550 30.539 167 98 3 118 266 2 168 4.47e-14 72.0
MsG0780040887.01.T01 MTR_5g085480 26.502 283 170 10 66 314 87 365 6.37e-14 75.5
MsG0780040887.01.T01 MTR_2g096760 30.806 211 124 5 120 314 11 215 6.89e-14 74.3
MsG0780040887.01.T01 MTR_1g089180 28.926 242 134 8 119 332 213 444 4.15e-13 72.0
MsG0780040887.01.T01 MTR_8g467780 21.990 382 219 11 71 440 10 324 2.44e-12 69.7
MsG0780040887.01.T01 MTR_8g040930 22.951 366 184 11 146 472 12 318 2.75e-12 68.9
MsG0780040887.01.T01 MTR_8g041240 22.951 366 184 11 146 472 12 318 2.75e-12 68.9
MsG0780040887.01.T01 MTR_3g055310 27.143 140 95 2 399 531 301 440 4.47e-12 68.9
MsG0780040887.01.T01 MTR_3g055310 27.143 140 95 2 399 531 329 468 4.52e-12 68.9
MsG0780040887.01.T01 MTR_3g055310 27.143 140 95 2 399 531 249 388 5.26e-12 68.6
MsG0780040887.01.T01 MTR_3g055310 27.143 140 95 2 399 531 327 466 5.27e-12 68.9
MsG0780040887.01.T01 MTR_3g055310 27.143 140 95 2 399 531 354 493 6.01e-12 68.6
MsG0780040887.01.T01 MTR_3g055310 27.143 140 95 2 399 531 186 325 6.30e-12 67.8
MsG0780040887.01.T01 MTR_1g112830 29.730 185 124 4 114 296 160 340 8.38e-12 68.6
MsG0780040887.01.T01 MTR_3g051060 29.518 166 100 3 118 266 54 219 8.50e-12 68.6
MsG0780040887.01.T01 MTR_8g069880 24.339 378 203 14 124 472 40 363 1.62e-11 67.0
MsG0780040887.01.T01 MTR_5g026800 33.557 149 95 4 154 302 8 152 2.34e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040887.01.T01 AT3G09550 73.129 588 141 4 11 582 28 614 0.0 839
MsG0780040887.01.T01 AT3G09550 73.129 588 141 4 11 582 21 607 0.0 838
MsG0780040887.01.T01 AT3G09550 73.129 588 141 4 11 582 21 607 0.0 838
MsG0780040887.01.T01 AT3G12360 69.739 575 163 5 11 582 24 590 0.0 786
MsG0780040887.01.T01 AT3G12360 69.739 575 163 5 11 582 12 578 0.0 786
MsG0780040887.01.T01 AT2G31820 42.065 523 268 5 65 573 148 649 4.86e-122 375
MsG0780040887.01.T01 AT5G60070 44.841 533 245 13 56 562 20 529 2.44e-120 367
MsG0780040887.01.T01 AT1G07710 43.376 551 266 8 56 582 15 543 7.39e-120 365
MsG0780040887.01.T01 AT1G07710 43.376 551 266 8 56 582 15 543 7.39e-120 365
MsG0780040887.01.T01 AT1G05640 42.315 527 268 8 65 576 110 615 1.70e-113 352
MsG0780040887.01.T01 AT2G01680 40.361 498 279 6 94 575 28 523 5.89e-113 347
MsG0780040887.01.T01 AT5G02620 40.631 507 271 6 56 548 5 495 2.56e-105 327
MsG0780040887.01.T01 AT5G02620 40.631 507 271 6 56 548 5 495 2.56e-105 327
MsG0780040887.01.T01 AT5G02620 40.631 507 271 6 56 548 5 495 2.56e-105 327
MsG0780040887.01.T01 AT5G02620 38.868 530 271 7 56 548 5 518 7.55e-100 314
MsG0780040887.01.T01 AT5G02620 38.868 530 271 7 56 548 5 518 7.55e-100 314
MsG0780040887.01.T01 AT1G34050 26.230 488 247 14 162 546 58 535 2.84e-34 137
MsG0780040887.01.T01 AT1G10340 24.578 533 315 13 68 544 37 538 4.30e-32 131
MsG0780040887.01.T01 AT1G10340 24.764 529 315 13 68 544 37 534 4.79e-32 130
MsG0780040887.01.T01 AT2G24600 24.863 547 315 17 68 549 37 552 2.47e-30 126
MsG0780040887.01.T01 AT2G24600 24.863 547 315 17 68 549 37 552 2.47e-30 126
MsG0780040887.01.T01 AT4G03500 24.000 500 333 13 69 527 103 596 2.26e-29 123
MsG0780040887.01.T01 AT4G03500 24.260 507 329 14 69 534 80 572 3.23e-29 122
MsG0780040887.01.T01 AT4G03500 24.260 507 329 14 69 534 80 572 3.23e-29 122
MsG0780040887.01.T01 AT5G54710 25.394 508 322 16 103 565 82 577 3.57e-29 122
MsG0780040887.01.T01 AT5G54710 25.394 508 322 16 103 565 127 622 4.22e-29 122
MsG0780040887.01.T01 AT1G03670 26.364 440 286 8 125 554 182 593 6.13e-26 112
MsG0780040887.01.T01 AT5G50140 23.387 496 321 12 122 561 26 518 5.41e-24 106
MsG0780040887.01.T01 AT4G03490 25.701 428 274 12 127 543 182 576 5.35e-22 100
MsG0780040887.01.T01 AT4G03490 25.829 422 269 12 127 537 172 560 7.26e-22 100
MsG0780040887.01.T01 AT4G03490 25.829 422 269 12 127 537 182 570 8.59e-22 100
MsG0780040887.01.T01 AT5G54700 25.333 375 210 9 195 535 4 342 8.91e-22 99.4
MsG0780040887.01.T01 AT4G03470 25.625 480 322 14 72 532 157 620 3.03e-21 98.6
MsG0780040887.01.T01 AT4G03460 25.000 420 270 9 120 525 158 546 5.14e-21 97.4
MsG0780040887.01.T01 AT4G03460 25.000 420 270 9 120 525 190 578 6.00e-21 97.4
MsG0780040887.01.T01 AT5G54700 27.469 324 188 10 249 550 20 318 3.56e-20 92.8
MsG0780040887.01.T01 AT4G14390 22.727 506 352 12 70 550 168 659 1.55e-19 93.2
MsG0780040887.01.T01 AT3G18670 24.224 483 295 16 123 534 84 566 6.40e-19 90.9
MsG0780040887.01.T01 AT4G14390 22.772 505 352 12 70 550 149 639 1.09e-18 90.5
MsG0780040887.01.T01 AT4G14390 22.772 505 352 12 70 550 168 658 1.46e-18 90.1
MsG0780040887.01.T01 AT2G03430 35.057 174 108 4 127 298 16 186 2.44e-18 85.1
MsG0780040887.01.T01 AT5G15500 30.049 203 121 5 125 309 40 239 4.25e-17 84.7
MsG0780040887.01.T01 AT4G03490 24.954 541 306 18 60 537 9 512 8.56e-17 84.3
MsG0780040887.01.T01 AT4G03490 24.863 547 311 18 60 543 19 528 9.38e-17 84.3
MsG0780040887.01.T01 AT1G14500 24.625 333 177 8 155 467 68 346 1.13e-16 83.2
MsG0780040887.01.T01 AT4G03480 25.641 351 227 8 155 474 312 659 1.52e-16 83.6
MsG0780040887.01.T01 AT4G03480 25.641 351 227 8 155 474 309 656 1.56e-16 83.6
MsG0780040887.01.T01 AT5G51160 26.990 289 168 7 155 437 44 295 1.95e-15 79.3
MsG0780040887.01.T01 AT2G24600 23.776 429 242 13 68 442 37 434 4.01e-15 79.0
MsG0780040887.01.T01 AT2G24600 23.776 429 242 13 68 442 37 434 4.01e-15 79.0
MsG0780040887.01.T01 AT4G10720 22.500 440 273 16 125 552 39 422 9.68e-15 77.0
MsG0780040887.01.T01 AT4G10720 23.714 350 223 9 125 469 39 349 2.77e-14 75.5
MsG0780040887.01.T01 AT4G03450 25.594 379 233 11 120 480 184 531 4.72e-14 75.5
MsG0780040887.01.T01 AT4G03450 25.594 379 233 11 120 480 184 531 6.98e-14 75.1
MsG0780040887.01.T01 AT4G03440 25.000 404 252 13 162 545 317 689 8.78e-14 75.1
MsG0780040887.01.T01 AT4G03440 25.000 404 252 13 162 545 310 682 1.07e-13 74.7
MsG0780040887.01.T01 AT4G03440 25.000 404 252 13 162 545 310 682 1.07e-13 74.7
MsG0780040887.01.T01 AT4G14390 24.619 394 248 10 70 435 149 521 1.76e-13 73.6
MsG0780040887.01.T01 AT3G18670 28.169 142 96 1 399 534 480 621 3.73e-13 72.8
MsG0780040887.01.T01 AT3G04710 28.516 256 152 9 43 280 30 272 7.63e-12 68.2
MsG0780040887.01.T01 AT3G04710 28.516 256 152 9 43 280 254 496 9.45e-12 68.6
MsG0780040887.01.T01 AT2G14255 27.848 237 157 7 125 352 26 257 1.52e-11 67.4
MsG0780040887.01.T01 AT4G19150 32.143 140 92 3 162 301 20 156 3.02e-11 64.3
MsG0780040887.01.T01 AT5G54610 28.342 187 121 3 125 300 39 223 5.56e-11 65.5

Find 157 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATATCAGAAGAGATTT+TGG 0.120998 7:-83846631 MsG0780040887.01.T01:CDS
GACTATTAAATAGCATAAAT+TGG 0.217594 7:+83845913 None:intergenic
AGTCCTTCTTTGGTGGTATA+AGG 0.227846 7:+83847716 None:intergenic
TCTAGGGGTGGTTGGGGTGT+TGG 0.234547 7:+83848108 None:intergenic
GCAATCCTTGTTACTGTTGT+AGG 0.240150 7:-83846081 MsG0780040887.01.T01:CDS
GATATTGTCAAGATATTGTT+AGG 0.241959 7:-83847109 MsG0780040887.01.T01:CDS
TCCCTCGTCATTTCCAATTC+TGG 0.254175 7:-83848028 MsG0780040887.01.T01:CDS
TCCAAAATCTCTTCTGATAT+TGG 0.257559 7:+83846630 None:intergenic
GGGTGGGTCTAGGGGTGGTT+GGG 0.257724 7:+83848101 None:intergenic
CCTTGGCTGGTTGAGATCAT+TGG 0.276643 7:+83846569 None:intergenic
TACCTCTACCCTCTTCTTCC+TGG 0.277013 7:+83846922 None:intergenic
TTTACAAGATAGTCCTTCTT+TGG 0.279483 7:+83847706 None:intergenic
CTAGGGGTGGTTGGGGTGTT+GGG 0.284653 7:+83848109 None:intergenic
GACGAGGCGTTTGCCAGAAT+TGG 0.304324 7:+83848015 None:intergenic
GGTGGGTCTAGGGGTGGTTG+GGG 0.319326 7:+83848102 None:intergenic
CCTCACTCTTCGGTGACGTT+TGG 0.320261 7:+83846005 None:intergenic
CCTGGTGGGGATCATGATAA+TGG 0.324667 7:-83846342 MsG0780040887.01.T01:CDS
ATTGTCATGGGTGGTGTTCT+TGG 0.335078 7:-83846054 MsG0780040887.01.T01:CDS
TGCCGGAAGTGGAGAGGAAT+AGG 0.343790 7:+83848080 None:intergenic
GAGAGGAATAGGGTGGGTCT+AGG 0.344264 7:+83848091 None:intergenic
GGTGGTTGGGGTGTTGGGTT+CGG 0.348554 7:+83848114 None:intergenic
AGGGTGGGTCTAGGGGTGGT+TGG 0.353657 7:+83848100 None:intergenic
ATGCTGAAGTTGCGGATATA+AGG 0.362620 7:-83847832 MsG0780040887.01.T01:CDS
GGAGACAAGAAGGGCTTTGC+CGG 0.364614 7:+83848063 None:intergenic
GACGAGGGATTTGTTGGAGT+TGG 0.371967 7:+83848042 None:intergenic
CACTTCATTGGCTGTGGTGG+TGG 0.381287 7:-83846253 MsG0780040887.01.T01:CDS
TCCTCAGCTCGTCCCTTGGC+TGG 0.388294 7:+83846556 None:intergenic
GAAAGAGGAGCGTGGCCGGC+GGG 0.390146 7:+83848136 None:intergenic
GAGGAATAGGGTGGGTCTAG+GGG 0.395584 7:+83848093 None:intergenic
CAATCCTTGTTACTGTTGTA+GGG 0.399588 7:-83846080 MsG0780040887.01.T01:CDS
AAGGACTCACTTATTCGTTA+TGG 0.399648 7:-83846603 MsG0780040887.01.T01:CDS
GTCCTTCTTTGGTGGTATAA+GGG 0.400914 7:+83847717 None:intergenic
AGAGGAATAGGGTGGGTCTA+GGG 0.406165 7:+83848092 None:intergenic
GTTCAAATAACTGTTGTTAG+AGG 0.406250 7:-83846231 MsG0780040887.01.T01:CDS
TCTCTTTCTTCCTCACTCTT+CGG 0.407155 7:+83845995 None:intergenic
GCGGTGATGCTGCCGCTGTT+AGG 0.410842 7:-83847913 MsG0780040887.01.T01:CDS
CGCTTCATATGGCGGTCAAA+GGG 0.411725 7:-83847039 MsG0780040887.01.T01:CDS
ATCTTATGATCCTAGTCAAT+TGG 0.414022 7:-83847191 MsG0780040887.01.T01:CDS
AAGTTGCTTCTTGCTGCTGA+TGG 0.419284 7:-83846998 MsG0780040887.01.T01:CDS
GTCATGCTTCCTGACAAGTT+TGG 0.426669 7:-83846968 MsG0780040887.01.T01:CDS
AAAACAAACAAGAATGTGAA+TGG 0.428260 7:-83846480 MsG0780040887.01.T01:CDS
TGCCGCTGTTAGGAATATTC+TGG 0.433235 7:-83847903 MsG0780040887.01.T01:CDS
GGAAATGACGAGGGATTTGT+TGG 0.436881 7:+83848036 None:intergenic
AAGAAGGGCTTTGCCGGAAG+TGG 0.440749 7:+83848069 None:intergenic
ATGAAGTGCATTCTTTCCAT+TGG 0.445344 7:+83847156 None:intergenic
GGAGATAAAGTCTGAGAGAA+GGG 0.447714 7:-83846208 MsG0780040887.01.T01:CDS
TTCGGAAAGAGGAGCGTGGC+CGG 0.449506 7:+83848132 None:intergenic
TTCATGGCGTAATTCTGATT+CGG 0.456908 7:-83845950 MsG0780040887.01.T01:CDS
CAAGGAATGGAACACATTCA+TGG 0.458877 7:-83845966 MsG0780040887.01.T01:CDS
GAATAGGGTGGGTCTAGGGG+TGG 0.461324 7:+83848096 None:intergenic
AGGGCATTCGCATTGGTGTC+GGG 0.461867 7:+83846696 None:intergenic
GCAGTATTGCCAAACTTGTC+AGG 0.463768 7:+83846959 None:intergenic
ACTTCATTTATCTGCACGCC+AGG 0.464249 7:-83847140 MsG0780040887.01.T01:CDS
GCAGCATCTTATATAGTAGT+TGG 0.467155 7:-83846123 MsG0780040887.01.T01:CDS
CTGGTGGGGATCATGATAAT+GGG 0.468589 7:-83846341 MsG0780040887.01.T01:CDS
GCAAATGTCTTGATTAGCTC+TGG 0.471908 7:+83847283 None:intergenic
ATCTTTCTTAATCTGAGTCA+TGG 0.474155 7:+83846530 None:intergenic
AATAGCATTTGAGATGAAAA+AGG 0.476303 7:+83846284 None:intergenic
AGGACAAACGCCGCTTCATA+TGG 0.478041 7:-83847050 MsG0780040887.01.T01:CDS
ACCCTATTCCTCTCCACTTC+CGG 0.480160 7:-83848082 MsG0780040887.01.T01:CDS
GTGCAACTTGCGTAGCTCCT+TGG 0.480210 7:+83846452 None:intergenic
GAGGGCATTCGCATTGGTGT+CGG 0.481466 7:+83846695 None:intergenic
ACAAGATAGTCCTTCTTTGG+TGG 0.484767 7:+83847709 None:intergenic
GGGGTGTTGGGTTCGGAAAG+AGG 0.490833 7:+83848121 None:intergenic
GGGAGATAAAGTCTGAGAGA+AGG 0.495604 7:-83846209 MsG0780040887.01.T01:CDS
TCTTGTGAGGGCATTCGCAT+TGG 0.498367 7:+83846689 None:intergenic
GCCGGAAGTGGAGAGGAATA+GGG 0.499698 7:+83848081 None:intergenic
TGTTGTAGGGGCGATTGTCA+TGG 0.500250 7:-83846067 MsG0780040887.01.T01:CDS
CCGCTTCATATGGCGGTCAA+AGG 0.504074 7:-83847040 MsG0780040887.01.T01:CDS
TTCAAATAACTGTTGTTAGA+GGG 0.504770 7:-83846230 MsG0780040887.01.T01:CDS
TTTCACTTCATTGGCTGTGG+TGG 0.508039 7:-83846256 MsG0780040887.01.T01:CDS
TCTTGATTAGCTCTGGATCA+TGG 0.513054 7:+83847290 None:intergenic
CTCCCTTATACCACCAAAGA+AGG 0.513242 7:-83847719 MsG0780040887.01.T01:CDS
TAGTTGGTCGACGCAGCCTG+TGG 0.515142 7:-83846107 MsG0780040887.01.T01:CDS
TGAGATTGATGATCAAATGA+TGG 0.517261 7:-83847879 MsG0780040887.01.T01:CDS
TGTTGGAGTTGGAGACAAGA+AGG 0.518725 7:+83848053 None:intergenic
GGAAAGAGGAGCGTGGCCGG+CGG 0.518995 7:+83848135 None:intergenic
AAACAAACAAGAATGTGAAT+GGG 0.523203 7:-83846479 MsG0780040887.01.T01:CDS
TGTTAACGAAGTTAATGACT+TGG 0.523723 7:-83847801 MsG0780040887.01.T01:CDS
TGCGGCTACAAGAGGGCATA+CGG 0.525316 7:-83847233 MsG0780040887.01.T01:CDS
CTACGCAAGTTGCACAGAGC+AGG 0.527125 7:-83846444 MsG0780040887.01.T01:CDS
CTAGCTATCTCCAATTGACT+AGG 0.532153 7:+83847181 None:intergenic
GTTGTAGGGGCGATTGTCAT+GGG 0.532598 7:-83846066 MsG0780040887.01.T01:CDS
AAAGAGGAGCGTGGCCGGCG+GGG 0.535243 7:+83848137 None:intergenic
GTTAACGAAGTTAATGACTT+GGG 0.535760 7:-83847800 MsG0780040887.01.T01:CDS
GGAAGAAAGAGAAGATCTCA+AGG 0.537556 7:-83845984 MsG0780040887.01.T01:CDS
TTGCATATTGCAGCAAATCA+AGG 0.538026 7:-83847662 MsG0780040887.01.T01:CDS
CTCGGTGTCATTATGACGAC+CGG 0.538570 7:+83847955 None:intergenic
GGTTTCTGTGCTATTTGCAA+CGG 0.540421 7:-83846391 MsG0780040887.01.T01:CDS
AAAGAGAAGATCTCAAGGAA+TGG 0.541144 7:-83845979 MsG0780040887.01.T01:CDS
CAGTCCTTCGAGCAAGCTGC+GGG 0.546468 7:+83847080 None:intergenic
CCAATGATCTCAACCAGCCA+AGG 0.546813 7:-83846569 MsG0780040887.01.T01:CDS
CTTGTATCTGCGGCTACAAG+AGG 0.552318 7:-83847241 MsG0780040887.01.T01:CDS
CCATTATCATGATCCCCACC+AGG 0.552472 7:+83846342 None:intergenic
GTCATTAACTTCGTTAACAA+TGG 0.552902 7:+83847805 None:intergenic
TTGGAGATAGCTAGATCCAA+TGG 0.558617 7:-83847172 MsG0780040887.01.T01:CDS
TCAGTCCTTCGAGCAAGCTG+CGG 0.564899 7:+83847079 None:intergenic
CTCTACCCTCTTCTTCCTGG+TGG 0.567336 7:+83846925 None:intergenic
TGCTACCAACTCTGTAACTG+TGG 0.569261 7:-83846412 MsG0780040887.01.T01:CDS
TTGCGCAGCAAGATGAAGCT+CGG 0.573480 7:+83847937 None:intergenic
GTTGGAGTTGGAGACAAGAA+GGG 0.573938 7:+83848054 None:intergenic
CTGCATTGCATGTAGCCACC+AGG 0.574200 7:-83846940 MsG0780040887.01.T01:CDS
ACCAGCCAAGGGACGAGCTG+AGG 0.575224 7:-83846557 MsG0780040887.01.T01:CDS
CACCAGGAAGAAGAGGGTAG+AGG 0.576801 7:-83846924 MsG0780040887.01.T01:intron
TGTCAAGATATTGTTAGGGA+AGG 0.577406 7:-83847104 MsG0780040887.01.T01:CDS
TGCAACTCCTCTTGTATCTG+CGG 0.578451 7:-83847251 MsG0780040887.01.T01:CDS
ATATTGTCAAGATATTGTTA+GGG 0.578514 7:-83847108 MsG0780040887.01.T01:CDS
CTTCATCTTGCTGCGCAACG+CGG 0.580064 7:-83847932 MsG0780040887.01.T01:CDS
TCAAATAACTGTTGTTAGAG+GGG 0.580153 7:-83846229 MsG0780040887.01.T01:CDS
AGGACCCGCAGCTTGCTCGA+AGG 0.582573 7:-83847084 MsG0780040887.01.T01:CDS
CCATTCATGGATCACCCCGC+CGG 0.583675 7:-83848151 None:intergenic
TGATTTGCTGCAATATGCAA+TGG 0.587424 7:+83847665 None:intergenic
TGTAGCCACCAGGAAGAAGA+GGG 0.588374 7:-83846930 MsG0780040887.01.T01:CDS
TGACAATATCAACATATCCC+TGG 0.590389 7:+83847122 None:intergenic
TAACAAGGATTGCAGCCCAC+AGG 0.594685 7:+83846091 None:intergenic
GAGATTGATGATCAAATGAT+GGG 0.600031 7:-83847878 MsG0780040887.01.T01:CDS
AGTTGGTCGACGCAGCCTGT+GGG 0.602868 7:-83846106 MsG0780040887.01.T01:CDS
GCTCGAAGGACTGATAAGAA+AGG 0.603769 7:-83847070 MsG0780040887.01.T01:CDS
ATGTAGCCACCAGGAAGAAG+AGG 0.605868 7:-83846931 MsG0780040887.01.T01:CDS
AGTGCTTCCGCAAGGTCAAG+AGG 0.607646 7:+83846654 None:intergenic
TGATAATGGGATGGCTGTGA+TGG 0.612051 7:-83846328 MsG0780040887.01.T01:CDS
TGCCAGAATTGGAAATGACG+AGG 0.612477 7:+83848026 None:intergenic
GTCTGAGAGAAGGGTTACAG+AGG 0.613101 7:-83846199 MsG0780040887.01.T01:CDS
GCCAGAATTGGAAATGACGA+GGG 0.613573 7:+83848027 None:intergenic
TGGGGATCATGATAATGGGA+TGG 0.614869 7:-83846337 MsG0780040887.01.T01:CDS
CTTCATTTATCTGCACGCCA+GGG 0.616151 7:-83847139 MsG0780040887.01.T01:CDS
AGGTGATCAATAAGATGATG+TGG 0.618952 7:-83846179 MsG0780040887.01.T01:CDS
AAATATGTAAAACAGGTCAC+CGG 0.619209 7:-83847974 MsG0780040887.01.T01:CDS
TTGTATCTGCGGCTACAAGA+GGG 0.620058 7:-83847240 MsG0780040887.01.T01:CDS
CCTTTGACCGCCATATGAAG+CGG 0.622609 7:+83847040 None:intergenic
CTTGTAGCCGCAGATACAAG+AGG 0.624185 7:+83847244 None:intergenic
AATCCTTGTTACTGTTGTAG+GGG 0.628981 7:-83846079 MsG0780040887.01.T01:CDS
CAAAGGGGTTAACTGTGAAG+TGG 0.630420 7:-83847023 MsG0780040887.01.T01:CDS
AGAAACCACAGTTACAGAGT+TGG 0.633035 7:+83846407 None:intergenic
GAATGTGAATGGGATTGCCA+AGG 0.633102 7:-83846469 MsG0780040887.01.T01:CDS
GGGCTTTGCCGGAAGTGGAG+AGG 0.635402 7:+83848074 None:intergenic
CAATGATCTCAACCAGCCAA+GGG 0.638090 7:-83846568 MsG0780040887.01.T01:CDS
TCTTGCTGGGTGTCTCGACG+AGG 0.640598 7:+83847999 None:intergenic
CCAAACGTCACCGAAGAGTG+AGG 0.649993 7:-83846005 MsG0780040887.01.T01:CDS
CAAAACACCTCTTGACCTTG+CGG 0.650691 7:-83846661 MsG0780040887.01.T01:CDS
GGAAGTGGAGAGGAATAGGG+TGG 0.652742 7:+83848084 None:intergenic
ATATTGGAAGTGCTTCCGCA+AGG 0.654649 7:+83846646 None:intergenic
AGCCAGAATATTCCTAACAG+CGG 0.659039 7:+83847901 None:intergenic
ACAAACGCCGCTTCATATGG+CGG 0.659247 7:-83847047 MsG0780040887.01.T01:CDS
AAAACGACCTTTCTCAGCTG+CGG 0.663709 7:+83847760 None:intergenic
GTAGGGGCGATTGTCATGGG+TGG 0.665750 7:-83846063 MsG0780040887.01.T01:CDS
GCAGCAAATCAAGGTCACAA+AGG 0.668138 7:-83847653 MsG0780040887.01.T01:intron
GCTTCATATGGCGGTCAAAG+GGG 0.676524 7:-83847038 MsG0780040887.01.T01:CDS
TCGCCCCTACAACAGTAACA+AGG 0.678707 7:+83846076 None:intergenic
TGGGTTCGGAAAGAGGAGCG+TGG 0.686370 7:+83848128 None:intergenic
CAAATGATGGGAACGCTCAG+TGG 0.691348 7:-83847866 MsG0780040887.01.T01:CDS
CATTATCATGATCCCCACCA+GGG 0.695526 7:+83846343 None:intergenic
TGCTGCAACAAATGAAACTG+AGG 0.698675 7:+83846140 None:intergenic
GAAGTGGAGAGGAATAGGGT+GGG 0.699796 7:+83848085 None:intergenic
TGAGTTTGATGCTGAAGTTG+CGG 0.701626 7:-83847840 MsG0780040887.01.T01:CDS
TGAAACTGAGGTGCACACAG+AGG 0.736654 7:+83846152 None:intergenic
GCAATGGATCAAAACCAGAG+CGG 0.786525 7:+83847681 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTTATAGAAAAAAAATTG+TGG - Chr7:83846495-83846514 MsG0780040887.01.T01:CDS 15.0%
!! TGTTATATTACTCAAAATAA+AGG + Chr7:83847264-83847283 None:intergenic 15.0%
!! ATATTGTCAAGATATTGTTA+GGG - Chr7:83846955-83846974 MsG0780040887.01.T01:CDS 20.0%
!! CAAGAAAAAATATGTAAAAC+AGG - Chr7:83846082-83846101 MsG0780040887.01.T01:CDS 20.0%
!!! TTTACATATTTTTTCTTGCT+GGG + Chr7:83846080-83846099 None:intergenic 20.0%
!!! TTTTACATATTTTTTCTTGC+TGG + Chr7:83846081-83846100 None:intergenic 20.0%
! AAAACAAACAAGAATGTGAA+TGG - Chr7:83847583-83847602 MsG0780040887.01.T01:intron 25.0%
! AAACAAACAAGAATGTGAAT+GGG - Chr7:83847584-83847603 MsG0780040887.01.T01:intron 25.0%
! CTGTTATATATTGTTGTGAA+TGG - Chr7:83846722-83846741 MsG0780040887.01.T01:CDS 25.0%
! GATATTGTCAAGATATTGTT+AGG - Chr7:83846954-83846973 MsG0780040887.01.T01:CDS 25.0%
! TGATATGATACATAAACATG+AGG - Chr7:83847191-83847210 MsG0780040887.01.T01:CDS 25.0%
! TTATATATTGTTGTGAATGG+TGG - Chr7:83846725-83846744 MsG0780040887.01.T01:intron 25.0%
! TTCAAATAACTGTTGTTAGA+GGG - Chr7:83847833-83847852 MsG0780040887.01.T01:CDS 25.0%
!! AATAGCATTTGAGATGAAAA+AGG + Chr7:83847782-83847801 None:intergenic 25.0%
AAAATCATAACCTGACTGTT+TGG + Chr7:83846671-83846690 None:intergenic 30.0%
AAATATGTAAAACAGGTCAC+CGG - Chr7:83846089-83846108 MsG0780040887.01.T01:CDS 30.0%
ATCTTATGATCCTAGTCAAT+TGG - Chr7:83846872-83846891 MsG0780040887.01.T01:intron 30.0%
ATCTTTCTTAATCTGAGTCA+TGG + Chr7:83847536-83847555 None:intergenic 30.0%
CTTATTTCCATAAGCTCTTT+AGG - Chr7:83846540-83846559 MsG0780040887.01.T01:CDS 30.0%
GTCATTAACTTCGTTAACAA+TGG + Chr7:83846261-83846280 None:intergenic 30.0%
GTTAACGAAGTTAATGACTT+GGG - Chr7:83846263-83846282 MsG0780040887.01.T01:CDS 30.0%
GTTCAAATAACTGTTGTTAG+AGG - Chr7:83847832-83847851 MsG0780040887.01.T01:CDS 30.0%
TCAAATAACTGTTGTTAGAG+GGG - Chr7:83847834-83847853 MsG0780040887.01.T01:CDS 30.0%
TCCAAAATCTCTTCTGATAT+TGG + Chr7:83847436-83847455 None:intergenic 30.0%
TGTTAACGAAGTTAATGACT+TGG - Chr7:83846262-83846281 MsG0780040887.01.T01:CDS 30.0%
TTTACAAGATAGTCCTTCTT+TGG + Chr7:83846360-83846379 None:intergenic 30.0%
! GAGATTGATGATCAAATGAT+GGG - Chr7:83846185-83846204 MsG0780040887.01.T01:CDS 30.0%
! TATTGCACTTTTCACTTCAT+TGG - Chr7:83847798-83847817 MsG0780040887.01.T01:CDS 30.0%
! TCCAATATCAGAAGAGATTT+TGG - Chr7:83847432-83847451 MsG0780040887.01.T01:intron 30.0%
! TCTTCAATGAGTATTGTCAT+AGG - Chr7:83846451-83846470 MsG0780040887.01.T01:CDS 30.0%
! TGAGATTGATGATCAAATGA+TGG - Chr7:83846184-83846203 MsG0780040887.01.T01:CDS 30.0%
AAAGAGAAGATCTCAAGGAA+TGG - Chr7:83848084-83848103 MsG0780040887.01.T01:CDS 35.0%
AAGGACTCACTTATTCGTTA+TGG - Chr7:83847460-83847479 MsG0780040887.01.T01:intron 35.0%
AATCCTTGTTACTGTTGTAG+GGG - Chr7:83847984-83848003 MsG0780040887.01.T01:CDS 35.0%
AGGTGATCAATAAGATGATG+TGG - Chr7:83847884-83847903 MsG0780040887.01.T01:CDS 35.0%
ATGAAGTGCATTCTTTCCAT+TGG + Chr7:83846910-83846929 None:intergenic 35.0%
CAATCCTTGTTACTGTTGTA+GGG - Chr7:83847983-83848002 MsG0780040887.01.T01:CDS 35.0%
GCAGCATCTTATATAGTAGT+TGG - Chr7:83847940-83847959 MsG0780040887.01.T01:CDS 35.0%
TAGCTATCCTAAAGAGCTTA+TGG + Chr7:83846550-83846569 None:intergenic 35.0%
TGACAATATCAACATATCCC+TGG + Chr7:83846944-83846963 None:intergenic 35.0%
TGTCAAGATATTGTTAGGGA+AGG - Chr7:83846959-83846978 MsG0780040887.01.T01:CDS 35.0%
TTCATGGCGTAATTCTGATT+CGG - Chr7:83848113-83848132 MsG0780040887.01.T01:CDS 35.0%
TTGCATATTGCAGCAAATCA+AGG - Chr7:83846401-83846420 MsG0780040887.01.T01:CDS 35.0%
! ACGTTTTTATCCAAACAGTC+AGG - Chr7:83846658-83846677 MsG0780040887.01.T01:CDS 35.0%
!! AGAAGAGATTTTGGAGATCA+AGG - Chr7:83847441-83847460 MsG0780040887.01.T01:intron 35.0%
!! TGATTTGCTGCAATATGCAA+TGG + Chr7:83846401-83846420 None:intergenic 35.0%
ACAAGATAGTCCTTCTTTGG+TGG + Chr7:83846357-83846376 None:intergenic 40.0%
AGAAACCACAGTTACAGAGT+TGG + Chr7:83847659-83847678 None:intergenic 40.0%
AGCCAGAATATTCCTAACAG+CGG + Chr7:83846165-83846184 None:intergenic 40.0%
ATGCTGAAGTTGCGGATATA+AGG - Chr7:83846231-83846250 MsG0780040887.01.T01:CDS 40.0%
CAAGGAATGGAACACATTCA+TGG - Chr7:83848097-83848116 MsG0780040887.01.T01:CDS 40.0%
CTAGCTATCTCCAATTGACT+AGG + Chr7:83846885-83846904 None:intergenic 40.0%
CTATCTTGTAAAAACCGCTC+TGG - Chr7:83846368-83846387 MsG0780040887.01.T01:CDS 40.0%
GCAATCCTTGTTACTGTTGT+AGG - Chr7:83847982-83848001 MsG0780040887.01.T01:CDS 40.0%
GGAAGAAAGAGAAGATCTCA+AGG - Chr7:83848079-83848098 MsG0780040887.01.T01:CDS 40.0%
GGAGATAAAGTCTGAGAGAA+GGG - Chr7:83847855-83847874 MsG0780040887.01.T01:CDS 40.0%
TCTCTTTCTTCCTCACTCTT+CGG + Chr7:83848071-83848090 None:intergenic 40.0%
TGAGTTTGATGCTGAAGTTG+CGG - Chr7:83846223-83846242 MsG0780040887.01.T01:CDS 40.0%
TGCTGCAACAAATGAAACTG+AGG + Chr7:83847926-83847945 None:intergenic 40.0%
TTGGAGATAGCTAGATCCAA+TGG - Chr7:83846891-83846910 MsG0780040887.01.T01:intron 40.0%
! AGTCCTTCTTTGGTGGTATA+AGG + Chr7:83846350-83846369 None:intergenic 40.0%
! GCAAATGTCTTGATTAGCTC+TGG + Chr7:83846783-83846802 None:intergenic 40.0%
! GTCCTTCTTTGGTGGTATAA+GGG + Chr7:83846349-83846368 None:intergenic 40.0%
! TGTTTTGTGGTCTCTTGTGA+GGG + Chr7:83847389-83847408 None:intergenic 40.0%
!! ACTTTTCACTTCATTGGCTG+TGG - Chr7:83847804-83847823 MsG0780040887.01.T01:CDS 40.0%
!! GGTTTCTGTGCTATTTGCAA+CGG - Chr7:83847672-83847691 MsG0780040887.01.T01:CDS 40.0%
!! TCTTGATTAGCTCTGGATCA+TGG + Chr7:83846776-83846795 None:intergenic 40.0%
AAAACGACCTTTCTCAGCTG+CGG + Chr7:83846306-83846325 None:intergenic 45.0%
AAGTTGCTTCTTGCTGCTGA+TGG - Chr7:83847065-83847084 MsG0780040887.01.T01:CDS 45.0%
ACTTCATTTATCTGCACGCC+AGG - Chr7:83846923-83846942 MsG0780040887.01.T01:intron 45.0%
ATTGTCATGGGTGGTGTTCT+TGG - Chr7:83848009-83848028 MsG0780040887.01.T01:CDS 45.0%
CAAAACACCTCTTGACCTTG+CGG - Chr7:83847402-83847421 MsG0780040887.01.T01:intron 45.0%
CAAAGGGGTTAACTGTGAAG+TGG - Chr7:83847040-83847059 MsG0780040887.01.T01:CDS 45.0%
CAATGATCTCAACCAGCCAA+GGG - Chr7:83847495-83847514 MsG0780040887.01.T01:intron 45.0%
CATTATCATGATCCCCACCA+GGG + Chr7:83847723-83847742 None:intergenic 45.0%
CTCCCTTATACCACCAAAGA+AGG - Chr7:83846344-83846363 MsG0780040887.01.T01:CDS 45.0%
CTGGTGGGGATCATGATAAT+GGG - Chr7:83847722-83847741 MsG0780040887.01.T01:CDS 45.0%
CTTCATTTATCTGCACGCCA+GGG - Chr7:83846924-83846943 MsG0780040887.01.T01:intron 45.0%
GAATGTGAATGGGATTGCCA+AGG - Chr7:83847594-83847613 MsG0780040887.01.T01:intron 45.0%
GCAATGGATCAAAACCAGAG+CGG + Chr7:83846385-83846404 None:intergenic 45.0%
GCAGCAAATCAAGGTCACAA+AGG - Chr7:83846410-83846429 MsG0780040887.01.T01:CDS 45.0%
GCAGTATTGCCAAACTTGTC+AGG + Chr7:83847107-83847126 None:intergenic 45.0%
GCCAGAATTGGAAATGACGA+GGG + Chr7:83846039-83846058 None:intergenic 45.0%
GCTCGAAGGACTGATAAGAA+AGG - Chr7:83846993-83847012 MsG0780040887.01.T01:CDS 45.0%
GGAAATGACGAGGGATTTGT+TGG + Chr7:83846030-83846049 None:intergenic 45.0%
GGGAGATAAAGTCTGAGAGA+AGG - Chr7:83847854-83847873 MsG0780040887.01.T01:CDS 45.0%
GTCATGCTTCCTGACAAGTT+TGG - Chr7:83847095-83847114 MsG0780040887.01.T01:CDS 45.0%
GTTGGAGTTGGAGACAAGAA+GGG + Chr7:83846012-83846031 None:intergenic 45.0%
TCCCTCGTCATTTCCAATTC+TGG - Chr7:83846035-83846054 MsG0780040887.01.T01:CDS 45.0%
TGCAACTCCTCTTGTATCTG+CGG - Chr7:83846812-83846831 MsG0780040887.01.T01:intron 45.0%
TGCCAGAATTGGAAATGACG+AGG + Chr7:83846040-83846059 None:intergenic 45.0%
TGCCGCTGTTAGGAATATTC+TGG - Chr7:83846160-83846179 MsG0780040887.01.T01:CDS 45.0%
TGCTACCAACTCTGTAACTG+TGG - Chr7:83847651-83847670 MsG0780040887.01.T01:intron 45.0%
TGTTGGAGTTGGAGACAAGA+AGG + Chr7:83846013-83846032 None:intergenic 45.0%
TTGTATCTGCGGCTACAAGA+GGG - Chr7:83846823-83846842 MsG0780040887.01.T01:intron 45.0%
! CTTTTTACCGCAGCTGAGAA+AGG - Chr7:83846296-83846315 MsG0780040887.01.T01:CDS 45.0%
! GTGTTTTGTGGTCTCTTGTG+AGG + Chr7:83847390-83847409 None:intergenic 45.0%
! TTTCACTTCATTGGCTGTGG+TGG - Chr7:83847807-83847826 MsG0780040887.01.T01:CDS 45.0%
!! ATATTGGAAGTGCTTCCGCA+AGG + Chr7:83847420-83847439 None:intergenic 45.0%
!! TGATAATGGGATGGCTGTGA+TGG - Chr7:83847735-83847754 MsG0780040887.01.T01:CDS 45.0%
!! TGGGGATCATGATAATGGGA+TGG - Chr7:83847726-83847745 MsG0780040887.01.T01:CDS 45.0%
!!! CAAGGTCAAGAGGTGTTTTG+TGG + Chr7:83847402-83847421 None:intergenic 45.0%
ACAAACGCCGCTTCATATGG+CGG - Chr7:83847016-83847035 MsG0780040887.01.T01:CDS 50.0%
ACCCTATTCCTCTCCACTTC+CGG - Chr7:83845981-83846000 MsG0780040887.01.T01:CDS 50.0%
AGAGGAATAGGGTGGGTCTA+GGG + Chr7:83845974-83845993 None:intergenic 50.0%
AGGACAAACGCCGCTTCATA+TGG - Chr7:83847013-83847032 MsG0780040887.01.T01:CDS 50.0%
ATGTAGCCACCAGGAAGAAG+AGG - Chr7:83847132-83847151 MsG0780040887.01.T01:CDS 50.0%
CCAATGATCTCAACCAGCCA+AGG - Chr7:83847494-83847513 MsG0780040887.01.T01:intron 50.0%
CCATTATCATGATCCCCACC+AGG + Chr7:83847724-83847743 None:intergenic 50.0%
CCTGGTGGGGATCATGATAA+TGG - Chr7:83847721-83847740 MsG0780040887.01.T01:CDS 50.0%
CCTTTGACCGCCATATGAAG+CGG + Chr7:83847026-83847045 None:intergenic 50.0%
CGCTTCATATGGCGGTCAAA+GGG - Chr7:83847024-83847043 MsG0780040887.01.T01:CDS 50.0%
CTCAGCTGCGGTAAAAAGTG+CGG + Chr7:83846294-83846313 None:intergenic 50.0%
CTTGTAGCCGCAGATACAAG+AGG + Chr7:83846822-83846841 None:intergenic 50.0%
CTTGTATCTGCGGCTACAAG+AGG - Chr7:83846822-83846841 MsG0780040887.01.T01:intron 50.0%
GAAGTGGAGAGGAATAGGGT+GGG + Chr7:83845981-83846000 None:intergenic 50.0%
GCTTCATATGGCGGTCAAAG+GGG - Chr7:83847025-83847044 MsG0780040887.01.T01:CDS 50.0%
GTCTGAGAGAAGGGTTACAG+AGG - Chr7:83847864-83847883 MsG0780040887.01.T01:CDS 50.0%
GTTGTAGGGGCGATTGTCAT+GGG - Chr7:83847997-83848016 MsG0780040887.01.T01:CDS 50.0%
TAACAAGGATTGCAGCCCAC+AGG + Chr7:83847975-83847994 None:intergenic 50.0%
TACCTCTACCCTCTTCTTCC+TGG + Chr7:83847144-83847163 None:intergenic 50.0%
TCGCCCCTACAACAGTAACA+AGG + Chr7:83847990-83848009 None:intergenic 50.0%
TGAAACTGAGGTGCACACAG+AGG + Chr7:83847914-83847933 None:intergenic 50.0%
TGTAGCCACCAGGAAGAAGA+GGG - Chr7:83847133-83847152 MsG0780040887.01.T01:CDS 50.0%
TGTTGTAGGGGCGATTGTCA+TGG - Chr7:83847996-83848015 MsG0780040887.01.T01:CDS 50.0%
TTGCGCAGCAAGATGAAGCT+CGG + Chr7:83846129-83846148 None:intergenic 50.0%
! ACTTTTCACAGTCCCTGGTG+GGG - Chr7:83847708-83847727 MsG0780040887.01.T01:CDS 50.0%
! CAAATGATGGGAACGCTCAG+TGG - Chr7:83846197-83846216 MsG0780040887.01.T01:CDS 50.0%
! CACTTTTCACAGTCCCTGGT+GGG - Chr7:83847707-83847726 MsG0780040887.01.T01:CDS 50.0%
! CCTTGGCTGGTTGAGATCAT+TGG + Chr7:83847497-83847516 None:intergenic 50.0%
!! CTCGGTGTCATTATGACGAC+CGG + Chr7:83846111-83846130 None:intergenic 50.0%
!! GACGAGGGATTTGTTGGAGT+TGG + Chr7:83846024-83846043 None:intergenic 50.0%
!! TCTTGTGAGGGCATTCGCAT+TGG + Chr7:83847377-83847396 None:intergenic 50.0%
AAGAAGGGCTTTGCCGGAAG+TGG + Chr7:83845997-83846016 None:intergenic 55.0%
AGTGCTTCCGCAAGGTCAAG+AGG + Chr7:83847412-83847431 None:intergenic 55.0%
CACCAGGAAGAAGAGGGTAG+AGG - Chr7:83847139-83847158 MsG0780040887.01.T01:CDS 55.0%
CCAAACGTCACCGAAGAGTG+AGG - Chr7:83848058-83848077 MsG0780040887.01.T01:CDS 55.0%
CCGCTTCATATGGCGGTCAA+AGG - Chr7:83847023-83847042 MsG0780040887.01.T01:CDS 55.0%
CCTCACTCTTCGGTGACGTT+TGG + Chr7:83848061-83848080 None:intergenic 55.0%
CTACGCAAGTTGCACAGAGC+AGG - Chr7:83847619-83847638 MsG0780040887.01.T01:intron 55.0%
CTCTACCCTCTTCTTCCTGG+TGG + Chr7:83847141-83847160 None:intergenic 55.0%
CTGCATTGCATGTAGCCACC+AGG - Chr7:83847123-83847142 MsG0780040887.01.T01:CDS 55.0%
CTTCATCTTGCTGCGCAACG+CGG - Chr7:83846131-83846150 MsG0780040887.01.T01:CDS 55.0%
GAGAGGAATAGGGTGGGTCT+AGG + Chr7:83845975-83845994 None:intergenic 55.0%
GAGGAATAGGGTGGGTCTAG+GGG + Chr7:83845973-83845992 None:intergenic 55.0%
GCCGGAAGTGGAGAGGAATA+GGG + Chr7:83845985-83846004 None:intergenic 55.0%
GGAAGTGGAGAGGAATAGGG+TGG + Chr7:83845982-83846001 None:intergenic 55.0%
GGAGACAAGAAGGGCTTTGC+CGG + Chr7:83846003-83846022 None:intergenic 55.0%
GTGCAACTTGCGTAGCTCCT+TGG + Chr7:83847614-83847633 None:intergenic 55.0%
TCAGTCCTTCGAGCAAGCTG+CGG + Chr7:83846987-83847006 None:intergenic 55.0%
TGCCGGAAGTGGAGAGGAAT+AGG + Chr7:83845986-83846005 None:intergenic 55.0%
! AGGGCATTCGCATTGGTGTC+GGG + Chr7:83847370-83847389 None:intergenic 55.0%
! CACTTCATTGGCTGTGGTGG+TGG - Chr7:83847810-83847829 MsG0780040887.01.T01:CDS 55.0%
! GACGAGGCGTTTGCCAGAAT+TGG + Chr7:83846051-83846070 None:intergenic 55.0%
! GCACTTTTCACAGTCCCTGG+TGG - Chr7:83847706-83847725 MsG0780040887.01.T01:CDS 55.0%
! GCAGCACTTTTCACAGTCCC+TGG - Chr7:83847703-83847722 MsG0780040887.01.T01:CDS 55.0%
! GTTTTCCTCAGCTCGTCCCT+TGG + Chr7:83847514-83847533 None:intergenic 55.0%
! TGCGGCTACAAGAGGGCATA+CGG - Chr7:83846830-83846849 MsG0780040887.01.T01:intron 55.0%
!! GAGGGCATTCGCATTGGTGT+CGG + Chr7:83847371-83847390 None:intergenic 55.0%
AGTTGGTCGACGCAGCCTGT+GGG - Chr7:83847957-83847976 MsG0780040887.01.T01:CDS 60.0%
CAGTCCTTCGAGCAAGCTGC+GGG + Chr7:83846986-83847005 None:intergenic 60.0%
GAATAGGGTGGGTCTAGGGG+TGG + Chr7:83845970-83845989 None:intergenic 60.0%
GTAGGGGCGATTGTCATGGG+TGG - Chr7:83848000-83848019 MsG0780040887.01.T01:CDS 60.0%
TAGTTGGTCGACGCAGCCTG+TGG - Chr7:83847956-83847975 MsG0780040887.01.T01:CDS 60.0%
TCTAGGGGTGGTTGGGGTGT+TGG + Chr7:83845958-83845977 None:intergenic 60.0%
TCTTGCTGGGTGTCTCGACG+AGG + Chr7:83846067-83846086 None:intergenic 60.0%
TGGGTTCGGAAAGAGGAGCG+TGG + Chr7:83845938-83845957 None:intergenic 60.0%
! CTAGGGGTGGTTGGGGTGTT+GGG + Chr7:83845957-83845976 None:intergenic 60.0%
! TTCGGAAAGAGGAGCGTGGC+CGG + Chr7:83845934-83845953 None:intergenic 60.0%
!! GGGGTGTTGGGTTCGGAAAG+AGG + Chr7:83845945-83845964 None:intergenic 60.0%
!! GGTGGTTGGGGTGTTGGGTT+CGG + Chr7:83845952-83845971 None:intergenic 60.0%
ACCAGCCAAGGGACGAGCTG+AGG - Chr7:83847506-83847525 MsG0780040887.01.T01:intron 65.0%
AGGGTGGGTCTAGGGGTGGT+TGG + Chr7:83845966-83845985 None:intergenic 65.0%
GCGGTGATGCTGCCGCTGTT+AGG - Chr7:83846150-83846169 MsG0780040887.01.T01:CDS 65.0%
GGGCTTTGCCGGAAGTGGAG+AGG + Chr7:83845992-83846011 None:intergenic 65.0%
GGGTGGGTCTAGGGGTGGTT+GGG + Chr7:83845965-83845984 None:intergenic 65.0%
GGTGGGTCTAGGGGTGGTTG+GGG + Chr7:83845964-83845983 None:intergenic 65.0%
TCCTCAGCTCGTCCCTTGGC+TGG + Chr7:83847510-83847529 None:intergenic 65.0%
! AGGACCCGCAGCTTGCTCGA+AGG - Chr7:83846979-83846998 MsG0780040887.01.T01:CDS 65.0%
! AAAGAGGAGCGTGGCCGGCG+GGG + Chr7:83845929-83845948 None:intergenic 70.0%
! GAAAGAGGAGCGTGGCCGGC+GGG + Chr7:83845930-83845949 None:intergenic 70.0%
! GGAAAGAGGAGCGTGGCCGG+CGG + Chr7:83845931-83845950 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 83845918 83848167 83845918 ID=MsG0780040887.01;Name=MsG0780040887.01
Chr7 mRNA 83845918 83848167 83845918 ID=MsG0780040887.01.T01;Parent=MsG0780040887.01;Name=MsG0780040887.01.T01;_AED=0.48;_eAED=0.49;_QI=0|0|0|1|1|1|3|0|582
Chr7 exon 83847654 83848167 83847654 ID=MsG0780040887.01.T01:exon:40557;Parent=MsG0780040887.01.T01
Chr7 exon 83846925 83847334 83846925 ID=MsG0780040887.01.T01:exon:40556;Parent=MsG0780040887.01.T01
Chr7 exon 83845918 83846742 83845918 ID=MsG0780040887.01.T01:exon:40555;Parent=MsG0780040887.01.T01
Chr7 CDS 83847654 83848167 83847654 ID=MsG0780040887.01.T01:cds;Parent=MsG0780040887.01.T01
Chr7 CDS 83846925 83847334 83846925 ID=MsG0780040887.01.T01:cds;Parent=MsG0780040887.01.T01
Chr7 CDS 83845918 83846742 83845918 ID=MsG0780040887.01.T01:cds;Parent=MsG0780040887.01.T01
Gene Sequence

>MsG0780040887.01.T01

ATGGATCACCCCGCCGGCCACGCTCCTCTTTCCGAACCCAACACCCCAACCACCCCTAGACCCACCCTATTCCTCTCCACTTCCGGCAAAGCCCTTCTTGTCTCCAACTCCAACAAATCCCTCGTCATTTCCAATTCTGGCAAACGCCTCGTCGAGACACCCAGCAAGAAAAAATATGTAAAACAGGTCACCGGTCGTCATAATGACACCGAGCTTCATCTTGCTGCGCAACGCGGTGATGCTGCCGCTGTTAGGAATATTCTGGCTGAGATTGATGATCAAATGATGGGAACGCTCAGTGGTGCTGAGTTTGATGCTGAAGTTGCGGATATAAGGTCTGCCATTGTTAACGAAGTTAATGACTTGGGTGAAACCGCACTTTTTACCGCAGCTGAGAAAGGTCGTTTTGATGTTGTTAAAGAGCTTCTCCCTTATACCACCAAAGAAGGACTATCTTGTAAAAACCGCTCTGGTTTTGATCCATTGCATATTGCAGCAAATCAAGGTCACAAAGAGATTGTGCAGTTGCTGCTAGACCATGATCCAGAGCTAATCAAGACATTTGCACAGTCAAATGCAACTCCTCTTGTATCTGCGGCTACAAGAGGGCATACGGATATTGTTGAATTGTTACTATCTTATGATCCTAGTCAATTGGAGATAGCTAGATCCAATGGAAAGAATGCACTTCATTTATCTGCACGCCAGGGATATGTTGATATTGTCAAGATATTGTTAGGGAAGGACCCGCAGCTTGCTCGAAGGACTGATAAGAAAGGACAAACGCCGCTTCATATGGCGGTCAAAGGGGTTAACTGTGAAGTGGTGAAGTTGCTTCTTGCTGCTGATGGTGCAAGTGTCATGCTTCCTGACAAGTTTGGCAATACTGCATTGCATGTAGCCACCAGGAAGAAGAGGGTAGAGATAGTGAATGAGTTGTTGCTTCTTCCCGACACCAATGCGAATGCCCTCACAAGAGACCACAAAACACCTCTTGACCTTGCGGAAGCACTTCCAATATCAGAAGAGATTTTGGAGATCAAGGACTCACTTATTCGTTATGGTGCAGTTAAAGCCAATGATCTCAACCAGCCAAGGGACGAGCTGAGGAAAACCATGACTCAGATTAAGAAAGATGTTTCTTTTCAGCTTGAACAAACTCGAAAAACAAACAAGAATGTGAATGGGATTGCCAAGGAGCTACGCAAGTTGCACAGAGCAGGAATCAACAATGCTACCAACTCTGTAACTGTGGTTTCTGTGCTATTTGCAACGGTTGCATTTGCAGCACTTTTCACAGTCCCTGGTGGGGATCATGATAATGGGATGGCTGTGATGGTTCACACTGCATCTTTTAAGACCTTTTTCATCTCAAATGCTATTGCACTTTTCACTTCATTGGCTGTGGTGGTGGTTCAAATAACTGTTGTTAGAGGGGAGATAAAGTCTGAGAGAAGGGTTACAGAGGTGATCAATAAGATGATGTGGTTAGCCTCTGTGTGCACCTCAGTTTCATTTGTTGCAGCATCTTATATAGTAGTTGGTCGACGCAGCCTGTGGGCTGCAATCCTTGTTACTGTTGTAGGGGCGATTGTCATGGGTGGTGTTCTTGGAACAATGACATACTATGTTATCAAATCCAAACGTCACCGAAGAGTGAGGAAGAAAGAGAAGATCTCAAGGAATGGAACACATTCATGGCGTAATTCTGATTCGGAATCAGAAGTAAATCCAATTTATGCTATTTAA
Protein sequence

>MsG0780040887.01.T01

MDHPAGHAPLSEPNTPTTPRPTLFLSTSGKALLVSNSNKSLVISNSGKRLVETPSKKKYVKQVTGRHNDTELHLAAQRGDAAAVRNILAEIDDQMMGTLSGAEFDAEVADIRSAIVNEVNDLGETALFTAAEKGRFDVVKELLPYTTKEGLSCKNRSGFDPLHIAANQGHKEIVQLLLDHDPELIKTFAQSNATPLVSAATRGHTDIVELLLSYDPSQLEIARSNGKNALHLSARQGYVDIVKILLGKDPQLARRTDKKGQTPLHMAVKGVNCEVVKLLLAADGASVMLPDKFGNTALHVATRKKRVEIVNELLLLPDTNANALTRDHKTPLDLAEALPISEEILEIKDSLIRYGAVKANDLNQPRDELRKTMTQIKKDVSFQLEQTRKTNKNVNGIAKELRKLHRAGINNATNSVTVVSVLFATVAFAALFTVPGGDHDNGMAVMVHTASFKTFFISNAIALFTSLAVVVVQITVVRGEIKSERRVTEVINKMMWLASVCTSVSFVAASYIVVGRRSLWAAILVTVVGAIVMGGVLGTMTYYVIKSKRHRRVRKKEKISRNGTHSWRNSDSESEVNPIYAI*