AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019050.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019050.01.T02 MTR_4g022890 84.959 492 10 2 1 428 1 492 0.0 805
MsG0480019050.01.T01 MTR_4g022890 84.959 492 10 2 1 428 1 492 0.0 805
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019050.01.T02 AT3G49990 40.159 503 180 17 13 428 12 480 5.32e-84 268
MsG0480019050.01.T01 AT3G49990 40.159 503 180 17 13 428 12 480 5.32e-84 268

Find 56 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAAGGAGATACTTGAATT+AGG 0.215417 4:-13854465 MsG0480019050.01.T01:CDS
TAAGGAAGGAGATGGGAATT+AGG 0.223975 4:+13854836 None:intergenic
CCACTCAAACCGCAACAAAA+TGG 0.225906 4:-13854709 MsG0480019050.01.T01:exon
TTGAGAGAAATTAAGAATTC+TGG 0.264953 4:-13854408 MsG0480019050.01.T01:CDS
AAGGAAGGAGATGGGAATTA+GGG 0.287355 4:+13854837 None:intergenic
TCCACTGTCTTCGGCATATT+CGG 0.295021 4:+13854506 None:intergenic
CGGTCGGATTCAGTGTATAT+TGG 0.319957 4:+13854615 None:intergenic
GGAAGGAGATACTTGAATTA+GGG 0.337330 4:-13854464 MsG0480019050.01.T01:CDS
CAGCCGCTTCCTCCTTCTTC+CGG 0.346095 4:-13854793 MsG0480019050.01.T01:five_prime_UTR
GGCTGTGGTGGTGGCGGTGG+TGG 0.346370 4:+13854730 None:intergenic
ACATGCTCAAGCTTAAACTT+AGG 0.394259 4:+13854360 None:intergenic
CACTCAAACCGCAACAAAAT+GGG 0.407305 4:-13854708 MsG0480019050.01.T01:exon
TGAGCATGTTAATGATGTTA+AGG 0.418616 4:-13854346 MsG0480019050.01.T01:intron
CTCCATCTTCGCCGATTCAC+CGG 0.422264 4:-13854553 MsG0480019050.01.T01:CDS
GGTCGGATTCAGTGTATATT+GGG 0.424459 4:+13854616 None:intergenic
GGATAAAATTCCACTGTCTT+CGG 0.425401 4:+13854497 None:intergenic
AGTGGCTGTGGTGGTGGCGG+TGG 0.437232 4:+13854727 None:intergenic
ATCCGGTGAATCGGCGAAGA+TGG 0.447120 4:+13854551 None:intergenic
GATAGAAGAAGAAGTAAGGA+AGG 0.449833 4:+13854822 None:intergenic
GAATTAGGGTTTCCTGATGA+TGG 0.457644 4:-13854450 MsG0480019050.01.T01:CDS
GGCTGATAGAAGAAGAAGTA+AGG 0.464527 4:+13854818 None:intergenic
GTCGGGGTCATCCGGTGAAT+CGG 0.472553 4:+13854542 None:intergenic
AGAAGAAGTAAGGAAGGAGA+TGG 0.476700 4:+13854828 None:intergenic
AATTCAGCGTCGGGGTCATC+CGG 0.477336 4:+13854534 None:intergenic
TTGAGTGGCTGTGGTGGTGG+CGG 0.484301 4:+13854724 None:intergenic
GAAGAAGTAAGGAAGGAGAT+GGG 0.484588 4:+13854829 None:intergenic
GGTTTGAGTGGCTGTGGTGG+TGG 0.495962 4:+13854721 None:intergenic
TCGGTGTCGAATTCAGCGTC+GGG 0.500261 4:+13854525 None:intergenic
AAGTAATTATAACCATCATC+AGG 0.505855 4:+13854438 None:intergenic
CGTGAAAGGTGACCGGAAGA+AGG 0.514060 4:+13854781 None:intergenic
TTGAGTCACGTGCCATGAGA+TGG 0.520538 4:+13854643 None:intergenic
CTCGGTCACCTTCCATCTCA+TGG 0.521161 4:-13854655 MsG0480019050.01.T01:CDS
TATCTCCTTCCTCACTTCAT+CGG 0.533621 4:+13854476 None:intergenic
TTCGGTGTCGAATTCAGCGT+CGG 0.538551 4:+13854524 None:intergenic
AAGAAGGAGGAAGCGGCTGA+TGG 0.552672 4:+13854797 None:intergenic
TTTATCCGATGAAGTGAGGA+AGG 0.558323 4:-13854481 MsG0480019050.01.T01:CDS
GGATTCAGTGTATATTGGGT+CGG 0.559039 4:+13854620 None:intergenic
TGACCGGAAGAAGGAGGAAG+CGG 0.566268 4:+13854790 None:intergenic
AGAGAAATTAAGAATTCTGG+TGG 0.567207 4:-13854405 MsG0480019050.01.T01:CDS
AAGATGGAGTCAGCGGAGAG+TGG 0.579260 4:+13854567 None:intergenic
TGTTGCGGTTTGAGTGGCTG+TGG 0.587168 4:+13854715 None:intergenic
GAAAGGACGTGAAAGGTGAC+CGG 0.593901 4:+13854774 None:intergenic
GGTGGTGGTTGTTGCCGCGT+CGG 0.595062 4:+13854745 None:intergenic
GAAATTAAGAATTCTGGTGG+CGG 0.599802 4:-13854402 MsG0480019050.01.T01:CDS
GAGAAAAGAAAGGACGTGAA+AGG 0.602938 4:+13854767 None:intergenic
TGCGGTTTGAGTGGCTGTGG+TGG 0.606612 4:+13854718 None:intergenic
ACCGAATATGCCGAAGACAG+TGG 0.608690 4:-13854507 MsG0480019050.01.T01:CDS
TGCCGCGTCGGAGAAAAGAA+AGG 0.620656 4:+13854757 None:intergenic
TCAAACCGCAACAAAATGGG+TGG 0.622063 4:-13854705 MsG0480019050.01.T01:exon
TGTCGACGCGGACGAAAACA+CGG 0.638359 4:+13854595 None:intergenic
GACGCGGACGAAAACACGGT+CGG 0.643661 4:+13854599 None:intergenic
GAAAGGTGACCGGAAGAAGG+AGG 0.658936 4:+13854784 None:intergenic
ATCGGCGAAGATGGAGTCAG+CGG 0.668568 4:+13854560 None:intergenic
CGGTGTCGAATTCAGCGTCG+GGG 0.698735 4:+13854526 None:intergenic
GTCACGTGCCATGAGATGGA+AGG 0.708293 4:+13854647 None:intergenic
AGAGTGGATTGTTGTCGACG+CGG 0.769639 4:+13854583 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGTATCTAAAATATTTTT+AGG - Chr4:13852554-13852573 MsG0480019050.01.T01:intron 10.0%
!!! TTTTTCAAAATATATTGAAA+TGG - Chr4:13853923-13853942 MsG0480019050.01.T01:intron 10.0%
!! AATTGATATCAAAATATGAA+TGG - Chr4:13851351-13851370 MsG0480019050.01.T01:CDS 15.0%
!! ATTATAGTGCATAATTAATA+TGG + Chr4:13854822-13854841 None:intergenic 15.0%
!! ATTGATATCAAAATATGAAT+GGG - Chr4:13851352-13851371 MsG0480019050.01.T01:CDS 15.0%
!! TTTAGAAATAATGATAGTTA+TGG - Chr4:13854105-13854124 MsG0480019050.01.T01:intron 15.0%
!!! AAAGTTTTGATTTTTGAAAT+AGG - Chr4:13850218-13850237 MsG0480019050.01.T01:intron 15.0%
!!! AAGTTTTGATTTTTGAAATA+GGG - Chr4:13850219-13850238 MsG0480019050.01.T01:intron 15.0%
!!! AGTTCTGTTTTATATATTTT+TGG - Chr4:13854853-13854872 MsG0480019050.01.T01:five_prime_UTR 15.0%
!!! CAATATATTTTGAAAAAAAC+TGG + Chr4:13853920-13853939 None:intergenic 15.0%
!!! GTTCTGTTTTATATATTTTT+GGG - Chr4:13854854-13854873 MsG0480019050.01.T01:five_prime_UTR 15.0%
!!! TTATTTATTGGTTATATGTA+AGG - Chr4:13854722-13854741 MsG0480019050.01.T01:intron 15.0%
!! AAATATATTGAAATGGAAAG+AGG - Chr4:13853930-13853949 MsG0480019050.01.T01:intron 20.0%
!! AAGTAAAAAGTAGTCAATAA+AGG + Chr4:13852755-13852774 None:intergenic 20.0%
!! AATATATTGAAATGGAAAGA+GGG - Chr4:13853931-13853950 MsG0480019050.01.T01:intron 20.0%
!! ATAAAAGAGGGAATTATTTA+AGG + Chr4:13851206-13851225 None:intergenic 20.0%
!! ATTCAAAAAAAACTTCGATT+TGG + Chr4:13851834-13851853 None:intergenic 20.0%
!! GAGATAACAAATAAATGAAA+AGG + Chr4:13851131-13851150 None:intergenic 20.0%
!! TAAAAGAGGGAATTATTTAA+GGG + Chr4:13851205-13851224 None:intergenic 20.0%
!! TAACTTACAGAAAAATAGTT+TGG + Chr4:13851911-13851930 None:intergenic 20.0%
!! TTTACTTGTAATAGCAATAT+AGG + Chr4:13852727-13852746 None:intergenic 20.0%
!!! ACTTTTGTTTTGTAGAAATA+CGG - Chr4:13854792-13854811 MsG0480019050.01.T01:five_prime_UTR 20.0%
!!! AGTTTTCATCTTATTTCTAT+AGG - Chr4:13850868-13850887 MsG0480019050.01.T01:CDS 20.0%
!!! ATATCATTATTCTGTTTTCT+CGG - Chr4:13854753-13854772 MsG0480019050.01.T01:five_prime_UTR 20.0%
!!! GTTGTTTTCATAAGTTATTA+TGG - Chr4:13850312-13850331 MsG0480019050.01.T01:intron 20.0%
!!! GTTTTGATGTCATTATTTAT+TGG - Chr4:13854710-13854729 MsG0480019050.01.T01:exon 20.0%
!!! TAAGGAGTAATACAATTTTT+GGG - Chr4:13854220-13854239 MsG0480019050.01.T01:intron 20.0%
!!! TCTGTTGTTTTTATGAATTT+AGG - Chr4:13851958-13851977 MsG0480019050.01.T01:intron 20.0%
!!! TGTTTTTTTGACAGTTTTTT+TGG - Chr4:13851570-13851589 MsG0480019050.01.T01:CDS 20.0%
!!! TTTTCCTGATTTATCTTTAT+AGG - Chr4:13854518-13854537 MsG0480019050.01.T01:CDS 20.0%
! AAATCTGAATTTGTGTGAAT+GGG - Chr4:13851384-13851403 MsG0480019050.01.T01:intron 25.0%
! AAGCTAACATATAACTTCTT+AGG + Chr4:13850987-13851006 None:intergenic 25.0%
! AAGTAATTATAACCATCATC+AGG + Chr4:13850028-13850047 None:intergenic 25.0%
! AAGTTAATTTCAATCTGTAC+TGG - Chr4:13851868-13851887 MsG0480019050.01.T01:intron 25.0%
! AATAAGATGAAAACTGCTTA+TGG + Chr4:13850863-13850882 None:intergenic 25.0%
! AATTGTATTACTCCTTAGTA+CGG + Chr4:13854217-13854236 None:intergenic 25.0%
! ACACATTAACGTAATAAAAG+AGG + Chr4:13851219-13851238 None:intergenic 25.0%
! ACCTAAACTTCTACTTAAAT+GGG + Chr4:13850588-13850607 None:intergenic 25.0%
! ACTGCTTATGGATATATAAA+AGG + Chr4:13850851-13850870 None:intergenic 25.0%
! AGCTAACATATAACTTCTTA+GGG + Chr4:13850986-13851005 None:intergenic 25.0%
! ATTCATCGACAAAAAAAACT+CGG - Chr4:13849790-13849809 MsG0480019050.01.T01:three_prime_UTR 25.0%
! CACATTAACGTAATAAAAGA+GGG + Chr4:13851218-13851237 None:intergenic 25.0%
! CATACATATCAAATTCACTT+TGG + Chr4:13851545-13851564 None:intergenic 25.0%
! CTACTTAAATGGGATTATAA+CGG + Chr4:13850578-13850597 None:intergenic 25.0%
! CTTACCTATAAAGATAAATC+AGG + Chr4:13854525-13854544 None:intergenic 25.0%
! CTTCAATTGTAGTAGAATTA+GGG + Chr4:13854398-13854417 None:intergenic 25.0%
! GAAAACTTACATAAGATGAT+AGG + Chr4:13853672-13853691 None:intergenic 25.0%
! GGAATGCATATATTCTTAAA+AGG - Chr4:13853971-13853990 MsG0480019050.01.T01:intron 25.0%
! GGTTCAATAACCAAAAAAAA+TGG - Chr4:13850650-13850669 MsG0480019050.01.T01:intron 25.0%
! GTTAGATGAACAATTTGATT+TGG - Chr4:13852399-13852418 MsG0480019050.01.T01:CDS 25.0%
! GTTTGTGTAAGATTATTAAC+AGG + Chr4:13850422-13850441 None:intergenic 25.0%
! TAAATGTGTTTCAATCTGAA+AGG - Chr4:13854068-13854087 MsG0480019050.01.T01:intron 25.0%
! TCATAAAACCATTATCCTTA+GGG + Chr4:13853502-13853521 None:intergenic 25.0%
! TCTTCAATTGTAGTAGAATT+AGG + Chr4:13854399-13854418 None:intergenic 25.0%
! TGATGTGAAAGATAAAAGTT+GGG + Chr4:13852626-13852645 None:intergenic 25.0%
! TTACACAAACTAATCAAAAC+AGG - Chr4:13850432-13850451 MsG0480019050.01.T01:intron 25.0%
! TTGAGAGAAATTAAGAATTC+TGG - Chr4:13850055-13850074 MsG0480019050.01.T01:intron 25.0%
! TTGTTAACTAACTGATTGTT+AGG - Chr4:13851021-13851040 MsG0480019050.01.T01:intron 25.0%
!! AAGGAGTAATACAATTTTTG+GGG - Chr4:13854221-13854240 MsG0480019050.01.T01:intron 25.0%
!! ACTTTTCAGTGTATTGTTTT+CGG - Chr4:13851503-13851522 MsG0480019050.01.T01:CDS 25.0%
!! AGTTAGAATCTTTTCCAAAT+TGG - Chr4:13851926-13851945 MsG0480019050.01.T01:intron 25.0%
!! CAATTTGATAATCAAAAGGA+AGG + Chr4:13850922-13850941 None:intergenic 25.0%
!! CTAAGGAGTAATACAATTTT+TGG - Chr4:13854219-13854238 MsG0480019050.01.T01:intron 25.0%
!! GATTATGGTGATGATTATTA+TGG - Chr4:13852846-13852865 MsG0480019050.01.T01:intron 25.0%
!! TTGTACAAAATGTTTTCTTC+AGG + Chr4:13852028-13852047 None:intergenic 25.0%
!! TTTAGTAGTTTGTCTGTATT+CGG - Chr4:13851283-13851302 MsG0480019050.01.T01:CDS 25.0%
!!! AAGCATTATTTCTATACACA+TGG - Chr4:13853820-13853839 MsG0480019050.01.T01:intron 25.0%
!!! AGCATTTATTTCTATACACA+TGG - Chr4:13853732-13853751 MsG0480019050.01.T01:intron 25.0%
!!! AGTGCTAACTAGTATTTTTT+TGG - Chr4:13854264-13854283 MsG0480019050.01.T01:intron 25.0%
!!! ATGTGTTTTGTTTTGTTGAT+CGG - Chr4:13851233-13851252 MsG0480019050.01.T01:CDS 25.0%
!!! CAATTTGATTTGGTAAGTTT+TGG - Chr4:13852409-13852428 MsG0480019050.01.T01:CDS 25.0%
!!! CTTCCTTTTGATTATCAAAT+TGG - Chr4:13850920-13850939 MsG0480019050.01.T01:intron 25.0%
!!! GTATTGCTTTGTTTCTTATA+TGG - Chr4:13852674-13852693 MsG0480019050.01.T01:intron 25.0%
!!! GTGCTAACTAGTATTTTTTT+GGG - Chr4:13854265-13854284 MsG0480019050.01.T01:intron 25.0%
!!! GTGTCTATTTCCATTTTTTT+TGG + Chr4:13850663-13850682 None:intergenic 25.0%
AAAACACTTGTGTACTTTCT+TGG + Chr4:13854695-13854714 None:intergenic 30.0%
AAAGAACTACAAGCTTACAA+AGG + Chr4:13851785-13851804 None:intergenic 30.0%
AATGATACAGGCAATTGTTA+GGG - Chr4:13850489-13850508 MsG0480019050.01.T01:intron 30.0%
ACATCGTGACAATAGTAATA+CGG + Chr4:13854009-13854028 None:intergenic 30.0%
AGAAAGGTAAATGCATTACT+TGG - Chr4:13853408-13853427 MsG0480019050.01.T01:intron 30.0%
AGAGAAATTAAGAATTCTGG+TGG - Chr4:13850058-13850077 MsG0480019050.01.T01:intron 30.0%
ATAACCGAAAATCTCAAGAA+AGG + Chr4:13851261-13851280 None:intergenic 30.0%
ATCAAATAATATTGTCCTGC+AGG - Chr4:13853866-13853885 MsG0480019050.01.T01:intron 30.0%
ATCGTATTGTATTTAGACCA+TGG - Chr4:13851691-13851710 MsG0480019050.01.T01:intron 30.0%
CAATGAAAGTTTACTGATGT+GGG - Chr4:13851610-13851629 MsG0480019050.01.T01:CDS 30.0%
CAATTGAAGTTGACTAAGAT+TGG - Chr4:13854347-13854366 MsG0480019050.01.T01:CDS 30.0%
CATTGAGTGACAATATTTAG+AGG + Chr4:13851067-13851086 None:intergenic 30.0%
CTCATAAAACCATTATCCTT+AGG + Chr4:13853503-13853522 None:intergenic 30.0%
CTGATGTGAAAGATAAAAGT+TGG + Chr4:13852627-13852646 None:intergenic 30.0%
CTTTATAATGTGAGGCAAAT+CGG - Chr4:13853612-13853631 MsG0480019050.01.T01:intron 30.0%
GAAATCTGAATTTGTGTGAA+TGG - Chr4:13851383-13851402 MsG0480019050.01.T01:intron 30.0%
GACCTAAACTTCTACTTAAA+TGG + Chr4:13850589-13850608 None:intergenic 30.0%
GCTTATGGATATATAAAAGG+TGG + Chr4:13850848-13850867 None:intergenic 30.0%
TATATAAAAGGTGGCTTCTA+AGG + Chr4:13850839-13850858 None:intergenic 30.0%
TATTGTATTTAGACCATGGT+TGG - Chr4:13851695-13851714 MsG0480019050.01.T01:intron 30.0%
TCATTGATGTTAAATCACCT+TGG - Chr4:13851424-13851443 MsG0480019050.01.T01:intron 30.0%
TCCCATTTAAGTAGAAGTTT+AGG - Chr4:13850584-13850603 MsG0480019050.01.T01:intron 30.0%
TGAAACACATTTATCTCAAC+AGG + Chr4:13854061-13854080 None:intergenic 30.0%
TGAGCATGTTAATGATGTTA+AGG - Chr4:13850117-13850136 MsG0480019050.01.T01:intron 30.0%
TGTAGATTCGACAAAAAACA+AGG + Chr4:13850699-13850718 None:intergenic 30.0%
TTTATAATGTGAGGCAAATC+GGG - Chr4:13853613-13853632 MsG0480019050.01.T01:intron 30.0%
TTTCCACTTAAGGAGATTAT+TGG + Chr4:13853256-13853275 None:intergenic 30.0%
TTTGTCGAATCTACATTGAT+TGG - Chr4:13850704-13850723 MsG0480019050.01.T01:intron 30.0%
! AATAATGCTTCCGATTTTGT+CGG + Chr4:13853810-13853829 None:intergenic 30.0%
! ATAAATGCTTCCGATTTTGA+CGG + Chr4:13853721-13853740 None:intergenic 30.0%
! CATTTTCACACTCATTTACA+AGG + Chr4:13854462-13854481 None:intergenic 30.0%
! GAGCCAATTTGATAATCAAA+AGG + Chr4:13850926-13850945 None:intergenic 30.0%
! TATTGGACTAGAGGAATTAA+AGG + Chr4:13853239-13853258 None:intergenic 30.0%
! TGTTAGCTTATGAATGATAC+AGG - Chr4:13850477-13850496 MsG0480019050.01.T01:intron 30.0%
! TTAGTAGTTTGTCTGTATTC+GGG - Chr4:13851284-13851303 MsG0480019050.01.T01:CDS 30.0%
!! AAGTTTTGCTTTTCCACTTA+AGG + Chr4:13853266-13853285 None:intergenic 30.0%
!! ACGATTGTTGTTTACAATGT+AGG + Chr4:13851676-13851695 None:intergenic 30.0%
!! AGGAGTAATACAATTTTTGG+GGG - Chr4:13854222-13854241 MsG0480019050.01.T01:intron 30.0%
AAAAGTTGGGAGAAAGCTAA+CGG + Chr4:13852613-13852632 None:intergenic 35.0%
ACAAATTTAGATAACCACCC+TGG - Chr4:13853154-13853173 MsG0480019050.01.T01:intron 35.0%
ACACATTTATCTCAACAGGA+AGG + Chr4:13854057-13854076 None:intergenic 35.0%
ACAGATCTTAAGAGCCAATT+TGG + Chr4:13851943-13851962 None:intergenic 35.0%
ACATGCTCAAGCTTAAACTT+AGG + Chr4:13850106-13850125 None:intergenic 35.0%
ACTGATGATAACAGCGATTA+TGG - Chr4:13852831-13852850 MsG0480019050.01.T01:intron 35.0%
ACTTGTGTACTTTCTTGGTT+GGG + Chr4:13854690-13854709 None:intergenic 35.0%
AGCAAAAAAATTGTTCCTGC+AGG + Chr4:13853884-13853903 None:intergenic 35.0%
AGGAAGGAGATACTTGAATT+AGG - Chr4:13849998-13850017 MsG0480019050.01.T01:intron 35.0%
AGTCCAATAATCTCCTTAAG+TGG - Chr4:13853250-13853269 MsG0480019050.01.T01:intron 35.0%
ATAAACACTCGCACAAGTAA+GGG + Chr4:13850458-13850477 None:intergenic 35.0%
ATTGAAATGGAAAGAGGGTA+GGG - Chr4:13853936-13853955 MsG0480019050.01.T01:intron 35.0%
ATTGTTCATCTAACAGACGA+CGG + Chr4:13852393-13852412 None:intergenic 35.0%
CAATATGTGCGCATTGTTTA+AGG + Chr4:13852269-13852288 None:intergenic 35.0%
GAAATTAAGAATTCTGGTGG+CGG - Chr4:13850061-13850080 MsG0480019050.01.T01:intron 35.0%
GAATGATACAGGCAATTGTT+AGG - Chr4:13850488-13850507 MsG0480019050.01.T01:intron 35.0%
GATAGAAGAAGAAGTAAGGA+AGG + Chr4:13849644-13849663 None:intergenic 35.0%
GCAATGAAAGTTTACTGATG+TGG - Chr4:13851609-13851628 MsG0480019050.01.T01:CDS 35.0%
GGAAGGAGATACTTGAATTA+GGG - Chr4:13849999-13850018 MsG0480019050.01.T01:intron 35.0%
GGATAAAATTCCACTGTCTT+CGG + Chr4:13849969-13849988 None:intergenic 35.0%
GTATAACGTGTGCTATATGA+TGG - Chr4:13850519-13850538 MsG0480019050.01.T01:intron 35.0%
TAACTGATTGTTAGGTCTGT+TGG - Chr4:13851029-13851048 MsG0480019050.01.T01:intron 35.0%
TAATGGAATGAACTTCACTG+AGG - Chr4:13852228-13852247 MsG0480019050.01.T01:CDS 35.0%
TAGCGATGAATCAGAAGTTT+GGG - Chr4:13853105-13853124 MsG0480019050.01.T01:intron 35.0%
TAGCTTGAATGTCAAGAGTA+TGG - Chr4:13852807-13852826 MsG0480019050.01.T01:intron 35.0%
TATCTCAACAGGAAGGTTAT+AGG + Chr4:13854050-13854069 None:intergenic 35.0%
TATTGAAATGGAAAGAGGGT+AGG - Chr4:13853935-13853954 MsG0480019050.01.T01:intron 35.0%
TGGAAAGATTGAAACACCTT+GGG - Chr4:13853174-13853193 MsG0480019050.01.T01:intron 35.0%
TTACAAGGAAAGTTCAAGAC+AGG + Chr4:13854447-13854466 None:intergenic 35.0%
TTATTGAACCAACACAGATC+AGG + Chr4:13850640-13850659 None:intergenic 35.0%
TTTATGCATGTAAACTGACC+TGG - Chr4:13854307-13854326 MsG0480019050.01.T01:intron 35.0%
TTTCGATCTACCGACAAAAT+CGG - Chr4:13853797-13853816 MsG0480019050.01.T01:intron 35.0%
TTTCGATCTACCGTCAAAAT+CGG - Chr4:13853708-13853727 MsG0480019050.01.T01:intron 35.0%
! AAGGTGTTTCAATCTTTCCA+GGG + Chr4:13853174-13853193 None:intergenic 35.0%
! ACTATGAGCTTTTACTCACT+GGG - Chr4:13850754-13850773 MsG0480019050.01.T01:CDS 35.0%
! GAATATGGTGAGAAGTATGA+AGG - Chr4:13853043-13853062 MsG0480019050.01.T01:intron 35.0%
! GAATTTTATCCGATGAAGTG+AGG - Chr4:13849978-13849997 MsG0480019050.01.T01:intron 35.0%
! GGTTCCTTTCTTGAGATTTT+CGG - Chr4:13851254-13851273 MsG0480019050.01.T01:CDS 35.0%
! GTATTGTTTTCGGATTGTCT+TGG - Chr4:13851513-13851532 MsG0480019050.01.T01:CDS 35.0%
! TAAGGAGATTATTGGACTAG+AGG + Chr4:13853248-13853267 None:intergenic 35.0%
! TACTATGAGCTTTTACTCAC+TGG - Chr4:13850753-13850772 MsG0480019050.01.T01:CDS 35.0%
! TGAAGGAGCTTTATAATGTG+AGG - Chr4:13853604-13853623 MsG0480019050.01.T01:intron 35.0%
! TGTACTGTTCAGTTTTTCTG+TGG + Chr4:13853344-13853363 None:intergenic 35.0%
!! AATTTTTGGGGGGTAAATCA+GGG - Chr4:13854233-13854252 MsG0480019050.01.T01:intron 35.0%
!! GGAGTAATACAATTTTTGGG+GGG - Chr4:13854223-13854242 MsG0480019050.01.T01:intron 35.0%
!!! ACCATGGTTGGATTAGTTTT+TGG - Chr4:13851707-13851726 MsG0480019050.01.T01:intron 35.0%
!!! TGACAACTGTGTTGTTTTGA+AGG - Chr4:13853533-13853552 MsG0480019050.01.T01:intron 35.0%
!!! TTTTTTTGCTTGAACTGCAC+TGG - Chr4:13853894-13853913 MsG0480019050.01.T01:intron 35.0%
AAACTTCCTATAGACTTGCC+TGG - Chr4:13853280-13853299 MsG0480019050.01.T01:intron 40.0%
AACAATGCGCACATATTGCA+AGG - Chr4:13852271-13852290 MsG0480019050.01.T01:CDS 40.0%
AAGAGAGAGTTTGAGCTTCT+CGG + Chr4:13852913-13852932 None:intergenic 40.0%
AAGGAAGGAGATGGGAATTA+GGG + Chr4:13849629-13849648 None:intergenic 40.0%
ACATGAGTAACGAGTAGAAC+TGG + Chr4:13854564-13854583 None:intergenic 40.0%
AGAAGAAGTAAGGAAGGAGA+TGG + Chr4:13849638-13849657 None:intergenic 40.0%
AGACCTAGAACATGAACAGA+AGG - Chr4:13852950-13852969 MsG0480019050.01.T01:intron 40.0%
ATCTGAAGGTCCACAATCAT+CGG + Chr4:13852317-13852336 None:intergenic 40.0%
ATGATTGTGGACCTTCAGAT+GGG - Chr4:13852317-13852336 MsG0480019050.01.T01:CDS 40.0%
CAAGCTTCATTGTAGTGCTA+TGG + Chr4:13854592-13854611 None:intergenic 40.0%
CACTCAAACCGCAACAAAAT+GGG - Chr4:13849755-13849774 MsG0480019050.01.T01:three_prime_UTR 40.0%
CACTTGTGTACTTTCTTGGT+TGG + Chr4:13854691-13854710 None:intergenic 40.0%
CAGTACAAGAGAAACACACA+TGG - Chr4:13853357-13853376 MsG0480019050.01.T01:intron 40.0%
CATAAACACTCGCACAAGTA+AGG + Chr4:13850459-13850478 None:intergenic 40.0%
CTCTGATGTTGAAGATTTGG+AGG - Chr4:13852141-13852160 MsG0480019050.01.T01:CDS 40.0%
CTGGAAAGATTGAAACACCT+TGG - Chr4:13853173-13853192 MsG0480019050.01.T01:intron 40.0%
GAAATACCATAGGCATGTAC+AGG - Chr4:13854172-13854191 MsG0480019050.01.T01:intron 40.0%
GAAGAAGTAAGGAAGGAGAT+GGG + Chr4:13849637-13849656 None:intergenic 40.0%
GAATTAGGGTTTCCTGATGA+TGG - Chr4:13850013-13850032 MsG0480019050.01.T01:intron 40.0%
GACCTAGAACATGAACAGAA+GGG - Chr4:13852951-13852970 MsG0480019050.01.T01:intron 40.0%
GAGAAAAGAAAGGACGTGAA+AGG + Chr4:13849699-13849718 None:intergenic 40.0%
GCCAAAAACTAATCCAACCA+TGG + Chr4:13851711-13851730 None:intergenic 40.0%
GGATTCAGTGTATATTGGGT+CGG + Chr4:13849846-13849865 None:intergenic 40.0%
GGCTGATAGAAGAAGAAGTA+AGG + Chr4:13849648-13849667 None:intergenic 40.0%
GGTCGGATTCAGTGTATATT+GGG + Chr4:13849850-13849869 None:intergenic 40.0%
GTAGCGATGAATCAGAAGTT+TGG - Chr4:13853104-13853123 MsG0480019050.01.T01:intron 40.0%
TAAGGAAGGAGATGGGAATT+AGG + Chr4:13849630-13849649 None:intergenic 40.0%
TACACATGGCAATAAGTTGC+AGG - Chr4:13853746-13853765 MsG0480019050.01.T01:intron 40.0%
TACACATGGCTATAAGTTGC+AGG - Chr4:13853834-13853853 MsG0480019050.01.T01:intron 40.0%
TAGAAAACCTGCTGCTGAAA+AGG - Chr4:13853306-13853325 MsG0480019050.01.T01:intron 40.0%
TAGATGACAGTGATGTGTCA+CGG - Chr4:13852113-13852132 MsG0480019050.01.T01:CDS 40.0%
TATCTCCTTCCTCACTTCAT+CGG + Chr4:13849990-13850009 None:intergenic 40.0%
TCACTGAGGAGTCTATGAAT+AGG - Chr4:13852242-13852261 MsG0480019050.01.T01:CDS 40.0%
TCTCACCATATTCCTTGCAA+CGG + Chr4:13853036-13853055 None:intergenic 40.0%
TGAAGACGTAGATGATGAAG+AGG - Chr4:13852192-13852211 MsG0480019050.01.T01:CDS 40.0%
TGCAAACGTCTCTAATGTAC+TGG - Chr4:13854143-13854162 MsG0480019050.01.T01:intron 40.0%
TTAGGTCCTCTACTTCGTTA+GGG - Chr4:13850602-13850621 MsG0480019050.01.T01:intron 40.0%
TTGAAATGGAAAGAGGGTAG+GGG - Chr4:13853937-13853956 MsG0480019050.01.T01:intron 40.0%
TTGTTCATCTAACAGACGAC+GGG + Chr4:13852392-13852411 None:intergenic 40.0%
TTTAGGTCCTCTACTTCGTT+AGG - Chr4:13850601-13850620 MsG0480019050.01.T01:intron 40.0%
TTTATCCGATGAAGTGAGGA+AGG - Chr4:13849982-13850001 MsG0480019050.01.T01:intron 40.0%
! ATAAAAGGTGGCTTCTAAGG+TGG + Chr4:13850836-13850855 None:intergenic 40.0%
! CAAGGTGTTTCAATCTTTCC+AGG + Chr4:13853175-13853194 None:intergenic 40.0%
! TCTTTAACCTTTTCAGCAGC+AGG + Chr4:13853316-13853335 None:intergenic 40.0%
! TCTTTCCACCCATTTTGTTG+CGG + Chr4:13849766-13849785 None:intergenic 40.0%
! TTCTTTTTCCTAGTTGCCCA+AGG + Chr4:13853193-13853212 None:intergenic 40.0%
!! CAATTTTTGGGGGGTAAATC+AGG - Chr4:13854232-13854251 MsG0480019050.01.T01:intron 40.0%
!! TAAAAGGTGGCTTCTAAGGT+GGG + Chr4:13850835-13850854 None:intergenic 40.0%
!! TGGCTCTGATGTTGAAGATT+TGG - Chr4:13852138-13852157 MsG0480019050.01.T01:CDS 40.0%
AAAGGTCTCATATGGTCTGC+AGG + Chr4:13850811-13850830 None:intergenic 45.0%
AAGGTCTCATATGGTCTGCA+GGG + Chr4:13850810-13850829 None:intergenic 45.0%
AAGTTTACTGATGTGGGCAC+AGG - Chr4:13851616-13851635 MsG0480019050.01.T01:CDS 45.0%
ACATGGCTATAAGTTGCAGG+TGG - Chr4:13853837-13853856 MsG0480019050.01.T01:intron 45.0%
AGACGTAGATGATGAAGAGG+AGG - Chr4:13852195-13852214 MsG0480019050.01.T01:CDS 45.0%
AGGTGGGAAAAGGTCTCATA+TGG + Chr4:13850819-13850838 None:intergenic 45.0%
AGTTTACTGATGTGGGCACA+GGG - Chr4:13851617-13851636 MsG0480019050.01.T01:CDS 45.0%
ATTCGCCGTTGCAAGGAATA+TGG - Chr4:13853028-13853047 MsG0480019050.01.T01:intron 45.0%
CATCATCTACGTCTTCACAG+AGG + Chr4:13852189-13852208 None:intergenic 45.0%
CCACTCAAACCGCAACAAAA+TGG - Chr4:13849754-13849773 MsG0480019050.01.T01:three_prime_UTR 45.0%
CGGTCGGATTCAGTGTATAT+TGG + Chr4:13849851-13849870 None:intergenic 45.0%
CTGCAGAAGGTGAAGAGAAA+AGG - Chr4:13852988-13853007 MsG0480019050.01.T01:intron 45.0%
GACCCTTCTGTTCATGTTCT+AGG + Chr4:13852956-13852975 None:intergenic 45.0%
GAGAAGCTCAAACTCTCTCT+TGG - Chr4:13852912-13852931 MsG0480019050.01.T01:intron 45.0%
GATACAGGCAATTGTTAGGG+TGG - Chr4:13850492-13850511 MsG0480019050.01.T01:intron 45.0%
GATGATTGTGGACCTTCAGA+TGG - Chr4:13852316-13852335 MsG0480019050.01.T01:CDS 45.0%
GGAGGAGAAGAAAGAGAGAA+AGG - Chr4:13853392-13853411 MsG0480019050.01.T01:intron 45.0%
GTGTTTCAATCTTTCCAGGG+TGG + Chr4:13853171-13853190 None:intergenic 45.0%
TCAAACCGCAACAAAATGGG+TGG - Chr4:13849758-13849777 MsG0480019050.01.T01:three_prime_UTR 45.0%
TCACAACCCTAACGAAGTAG+AGG + Chr4:13850611-13850630 None:intergenic 45.0%
TCCACTGTCTTCGGCATATT+CGG + Chr4:13849960-13849979 None:intergenic 45.0%
TGAACAGAAGGGTCAGTACA+AGG - Chr4:13852962-13852981 MsG0480019050.01.T01:intron 45.0%
TGATTGTGGACCTTCAGATG+GGG - Chr4:13852318-13852337 MsG0480019050.01.T01:CDS 45.0%
TGTGATTCACGAATCCTGAC+AGG - Chr4:13851172-13851191 MsG0480019050.01.T01:CDS 45.0%
TGTTCATCTAACAGACGACG+GGG + Chr4:13852391-13852410 None:intergenic 45.0%
TTAAGGGATCACAACCTGTC+AGG + Chr4:13851189-13851208 None:intergenic 45.0%
TTCTAGGTCTTCCACCTTAC+GGG + Chr4:13852940-13852959 None:intergenic 45.0%
TTGAAACACCTTGGGCAACT+AGG - Chr4:13853182-13853201 MsG0480019050.01.T01:intron 45.0%
TTGTGGACATCAGTTCTCCA+AGG + Chr4:13851444-13851463 None:intergenic 45.0%
TTTGAAGGCTGCTGTGAAAG+AGG - Chr4:13853548-13853567 MsG0480019050.01.T01:intron 45.0%
! ACATGGTCTAGAGTCAAAGG+AGG - Chr4:13853374-13853393 MsG0480019050.01.T01:intron 45.0%
! CACACATGGTCTAGAGTCAA+AGG - Chr4:13853371-13853390 MsG0480019050.01.T01:intron 45.0%
! CCATTTTGTTGCGGTTTGAG+TGG + Chr4:13849757-13849776 None:intergenic 45.0%
! CTTTTCTCTTCACCTTCTGC+AGG + Chr4:13852990-13853009 None:intergenic 45.0%
! GTTCTAGGTCTTCCACCTTA+CGG + Chr4:13852941-13852960 None:intergenic 45.0%
!! ACGTCTCTAATGTACTGGCT+TGG - Chr4:13854148-13854167 MsG0480019050.01.T01:intron 45.0%
!! CTGGCTTGGTGAAATACCAT+AGG - Chr4:13854162-13854181 MsG0480019050.01.T01:intron 45.0%
!! ATAAATTTAAATATAAATTG+TGG + Chr4:13851461-13851480 None:intergenic 5.0%
AAATACCGCAGGCCGTACTA+AGG - Chr4:13854202-13854221 MsG0480019050.01.T01:intron 50.0%
ACCAAGCCTGTACATGCCTA+TGG + Chr4:13854181-13854200 None:intergenic 50.0%
ACCATAGGCATGTACAGGCT+TGG - Chr4:13854177-13854196 MsG0480019050.01.T01:intron 50.0%
ACCGAATATGCCGAAGACAG+TGG - Chr4:13849956-13849975 MsG0480019050.01.T01:intron 50.0%
ACTCTCTCTTGGAACCCGTA+AGG - Chr4:13852923-13852942 MsG0480019050.01.T01:intron 50.0%
ATCTAGCAATGCAGCCACCT+CGG + Chr4:13852098-13852117 None:intergenic 50.0%
CAAAGAGTTGCAGCTGGATC+TGG - Chr4:13853638-13853657 MsG0480019050.01.T01:intron 50.0%
CAGTACAAGGTTCCTGCAGA+AGG - Chr4:13852975-13852994 MsG0480019050.01.T01:intron 50.0%
CCATTTGAACCCCCATCTGA+AGG + Chr4:13852331-13852350 None:intergenic 50.0%
CCTTCAGATGGGGGTTCAAA+TGG - Chr4:13852328-13852347 MsG0480019050.01.T01:CDS 50.0%
CGCTGTCTCCCTAAGGATAA+TGG - Chr4:13853491-13853510 MsG0480019050.01.T01:intron 50.0%
CTACCACCAGGCAAGTCTAT+AGG + Chr4:13853289-13853308 None:intergenic 50.0%
CTTACGATGCTTCGAGAGTG+CGG - Chr4:13851981-13852000 MsG0480019050.01.T01:intron 50.0%
CTTCCTATAGACTTGCCTGG+TGG - Chr4:13853283-13853302 MsG0480019050.01.T01:intron 50.0%
CTTGCAACGGCGAATCACAT+CGG + Chr4:13853023-13853042 None:intergenic 50.0%
GAAAGGACGTGAAAGGTGAC+CGG + Chr4:13849692-13849711 None:intergenic 50.0%
GACAGTGACCTGATCTGTGT+TGG - Chr4:13850629-13850648 MsG0480019050.01.T01:intron 50.0%
GACAGTGATGTGTCACGGTT+TGG - Chr4:13852118-13852137 MsG0480019050.01.T01:CDS 50.0%
GATTGTGGACCTTCAGATGG+GGG - Chr4:13852319-13852338 MsG0480019050.01.T01:CDS 50.0%
GCACTACAATGAAGCTTGCG+AGG - Chr4:13854594-13854613 MsG0480019050.01.T01:CDS 50.0%
GGCTTTCTGAACCCTGACAT+TGG + Chr4:13852068-13852087 None:intergenic 50.0%
TCCACAATCATCGGCAACAG+TGG + Chr4:13852308-13852327 None:intergenic 50.0%
TGTGAAAGAGGAACGTCGTG+AGG - Chr4:13853560-13853579 MsG0480019050.01.T01:intron 50.0%
TTACTCCTTAGTACGGCCTG+CGG + Chr4:13854210-13854229 None:intergenic 50.0%
TTGAGTCACGTGCCATGAGA+TGG + Chr4:13849823-13849842 None:intergenic 50.0%
! GAGCTTTTACTCACTGGGAG+TGG - Chr4:13850759-13850778 MsG0480019050.01.T01:CDS 50.0%
! GAGGAGGTACACATGCGTAA+TGG - Chr4:13852211-13852230 MsG0480019050.01.T01:CDS 50.0%
! GTCCTTTCTTTTCTCCGACG+CGG - Chr4:13849704-13849723 MsG0480019050.01.T01:three_prime_UTR 50.0%
! TTACGATGCTTCGAGAGTGC+GGG - Chr4:13851982-13852001 MsG0480019050.01.T01:intron 50.0%
! TTCGAGAGTGCGGGTTAAAG+AGG - Chr4:13851991-13852010 MsG0480019050.01.T01:intron 50.0%
!! AGAGTGGATTGTTGTCGACG+CGG + Chr4:13849883-13849902 None:intergenic 50.0%
!! GTGGCTTCTAAGGTGGGAAA+AGG + Chr4:13850829-13850848 None:intergenic 50.0%
!! TTCGGTGTCGAATTCAGCGT+CGG + Chr4:13849942-13849961 None:intergenic 50.0%
AACCCTGACATTGGCAGTGC+TGG + Chr4:13852059-13852078 None:intergenic 55.0%
AAGAAGGAGGAAGCGGCTGA+TGG + Chr4:13849669-13849688 None:intergenic 55.0%
AAGATGGAGTCAGCGGAGAG+TGG + Chr4:13849899-13849918 None:intergenic 55.0%
AATGGAAAGAGGGTAGGGGC+TGG - Chr4:13853941-13853960 MsG0480019050.01.T01:intron 55.0%
AGAGTTGCAGCTGGATCTGG+TGG - Chr4:13853641-13853660 MsG0480019050.01.T01:intron 55.0%
ATCCGGTGAATCGGCGAAGA+TGG + Chr4:13849915-13849934 None:intergenic 55.0%
ATCCTTAGGGAGACAGCGAC+TGG + Chr4:13853489-13853508 None:intergenic 55.0%
ATCGGCGAAGATGGAGTCAG+CGG + Chr4:13849906-13849925 None:intergenic 55.0%
ATGGAAAGAGGGTAGGGGCT+GGG - Chr4:13853942-13853961 MsG0480019050.01.T01:intron 55.0%
CGATGTGATTCGCCGTTGCA+AGG - Chr4:13853021-13853040 MsG0480019050.01.T01:intron 55.0%
CGTGAAAGGTGACCGGAAGA+AGG + Chr4:13849685-13849704 None:intergenic 55.0%
CTCGGTCACCTTCCATCTCA+TGG - Chr4:13849808-13849827 MsG0480019050.01.T01:three_prime_UTR 55.0%
CTCTCTTGGAACCCGTAAGG+TGG - Chr4:13852926-13852945 MsG0480019050.01.T01:intron 55.0%
GAAAGGTGACCGGAAGAAGG+AGG + Chr4:13849682-13849701 None:intergenic 55.0%
GCAACAGGTGTGTACTCTGC+TGG - Chr4:13852352-13852371 MsG0480019050.01.T01:CDS 55.0%
GCCACTGTTGCCGATGATTG+TGG - Chr4:13852304-13852323 MsG0480019050.01.T01:CDS 55.0%
GGGGGTTCAAATGGTGCAAC+AGG - Chr4:13852337-13852356 MsG0480019050.01.T01:CDS 55.0%
GTCACGTGCCATGAGATGGA+AGG + Chr4:13849819-13849838 None:intergenic 55.0%
GTCCAGCACTGCCAATGTCA+GGG - Chr4:13852054-13852073 MsG0480019050.01.T01:intron 55.0%
GTGTGCACTGAGCACTTACC+AGG + Chr4:13854328-13854347 None:intergenic 55.0%
TACTGATGTGGGCACAGGGT+GGG - Chr4:13851621-13851640 MsG0480019050.01.T01:CDS 55.0%
TCAGAAAGCCGTTGATCCCG+AGG - Chr4:13852078-13852097 MsG0480019050.01.T01:CDS 55.0%
TCTAACAGACGACGGGGTCT+TGG + Chr4:13852385-13852404 None:intergenic 55.0%
TCTAGCAATGCAGCCACCTC+GGG + Chr4:13852097-13852116 None:intergenic 55.0%
TGACCGGAAGAAGGAGGAAG+CGG + Chr4:13849676-13849695 None:intergenic 55.0%
TGCCGCGTCGGAGAAAAGAA+AGG + Chr4:13849709-13849728 None:intergenic 55.0%
TGTCGACGCGGACGAAAACA+CGG + Chr4:13849871-13849890 None:intergenic 55.0%
TGTTGCGGTTTGAGTGGCTG+TGG + Chr4:13849751-13849770 None:intergenic 55.0%
TTACTGATGTGGGCACAGGG+TGG - Chr4:13851620-13851639 MsG0480019050.01.T01:CDS 55.0%
! AATTCAGCGTCGGGGTCATC+CGG + Chr4:13849932-13849951 None:intergenic 55.0%
! GAGAGTGCGGGTTAAAGAGG+TGG - Chr4:13851994-13852013 MsG0480019050.01.T01:intron 55.0%
! GCAGCAGGTTTTCTACCACC+AGG + Chr4:13853301-13853320 None:intergenic 55.0%
!! CAGGCTTGGTGAAATACCGC+AGG - Chr4:13854191-13854210 MsG0480019050.01.T01:intron 55.0%
!! CTCCATCTTCGCCGATTCAC+CGG - Chr4:13849910-13849929 MsG0480019050.01.T01:CDS 55.0%
!! TCGGTGTCGAATTCAGCGTC+GGG + Chr4:13849941-13849960 None:intergenic 55.0%
CACCAGTCGCTGTCTCCCTA+AGG - Chr4:13853484-13853503 MsG0480019050.01.T01:intron 60.0%
CAGCCGCTTCCTCCTTCTTC+CGG - Chr4:13849670-13849689 MsG0480019050.01.T01:three_prime_UTR 60.0%
CGGGCACAAAGAGTTGCAGC+TGG - Chr4:13853632-13853651 MsG0480019050.01.T01:intron 60.0%
CGTCCAGCACTGCCAATGTC+AGG - Chr4:13852053-13852072 MsG0480019050.01.T01:intron 60.0%
GAAAGCCGTTGATCCCGAGG+TGG - Chr4:13852081-13852100 MsG0480019050.01.T01:CDS 60.0%
GACGCGGACGAAAACACGGT+CGG + Chr4:13849867-13849886 None:intergenic 60.0%
GGTTTGAGTGGCTGTGGTGG+TGG + Chr4:13849745-13849764 None:intergenic 60.0%
GTCGGGGTCATCCGGTGAAT+CGG + Chr4:13849924-13849943 None:intergenic 60.0%
TGCAGCCACCTCGGGATCAA+CGG + Chr4:13852089-13852108 None:intergenic 60.0%
TGCGGTTTGAGTGGCTGTGG+TGG + Chr4:13849748-13849767 None:intergenic 60.0%
TGGAAAGAGGGTAGGGGCTG+GGG - Chr4:13853943-13853962 MsG0480019050.01.T01:intron 60.0%
! CGGTGTCGAATTCAGCGTCG+GGG + Chr4:13849940-13849959 None:intergenic 60.0%
!! TTGAGTGGCTGTGGTGGTGG+CGG + Chr4:13849742-13849761 None:intergenic 60.0%
AAAGAGGGTAGGGGCTGGGG+AGG - Chr4:13853946-13853965 MsG0480019050.01.T01:intron 65.0%
! GGTGGTGGTTGTTGCCGCGT+CGG + Chr4:13849721-13849740 None:intergenic 65.0%
AGGGTAGGGGCTGGGGAGGA+TGG - Chr4:13853950-13853969 MsG0480019050.01.T01:intron 70.0%
!! AGTGGCTGTGGTGGTGGCGG+TGG + Chr4:13849739-13849758 None:intergenic 70.0%
!! GGCTGTGGTGGTGGCGGTGG+TGG + Chr4:13849736-13849755 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 13849604 13854881 13849604 ID=MsG0480019050.01;Name=MsG0480019050.01
Chr4 mRNA 13849604 13854878 13849604 ID=MsG0480019050.01.T01;Parent=MsG0480019050.01;Name=MsG0480019050.01.T01;_AED=0.42;_eAED=0.44;_QI=145|0.5|0.57|1|0.5|0.14|7|276|499
Chr4 exon 13854347 13854731 13854347 ID=MsG0480019050.01.T01:exon:8585;Parent=MsG0480019050.01.T01
Chr4 exon 13854753 13854878 13854753 ID=MsG0480019050.01.T01:exon:8584;Parent=MsG0480019050.01.T01
Chr4 five_prime_UTR 13854753 13854878 13854753 ID=MsG0480019050.01.T01:five_prime_utr;Parent=MsG0480019050.01.T01
Chr4 five_prime_UTR 13854713 13854731 13854713 ID=MsG0480019050.01.T01:five_prime_utr;Parent=MsG0480019050.01.T01
Chr4 CDS 13854347 13854712 13854347 ID=MsG0480019050.01.T01:cds;Parent=MsG0480019050.01.T01
Chr4 CDS 13852065 13852505 13852065 ID=MsG0480019050.01.T01:cds;Parent=MsG0480019050.01.T01
Chr4 CDS 13851489 13851675 13851489 ID=MsG0480019050.01.T01:cds;Parent=MsG0480019050.01.T01
Chr4 CDS 13851158 13851384 13851158 ID=MsG0480019050.01.T01:cds;Parent=MsG0480019050.01.T01
Chr4 CDS 13850718 13850930 13850718 ID=MsG0480019050.01.T01:cds;Parent=MsG0480019050.01.T01
Chr4 CDS 13849880 13849945 13849880 ID=MsG0480019050.01.T01:cds;Parent=MsG0480019050.01.T01
Chr4 three_prime_UTR 13849604 13849879 13849604 ID=MsG0480019050.01.T01:three_prime_utr;Parent=MsG0480019050.01.T01
Chr4 mRNA 13849604 13854881 13849604 ID=MsG0480019050.01.T02;Parent=MsG0480019050.01;Name=MsG0480019050.01.T02;_AED=0.41;_eAED=0.44;_QI=169|0.4|0.5|1|0.6|0.33|6|276|499
Chr4 exon 13854347 13854881 13854347 ID=MsG0480019050.01.T02:exon:8591;Parent=MsG0480019050.01.T02
Chr4 five_prime_UTR 13854713 13854881 13854713 ID=MsG0480019050.01.T02:five_prime_utr;Parent=MsG0480019050.01.T02
Chr4 CDS 13854347 13854712 13854347 ID=MsG0480019050.01.T02:cds;Parent=MsG0480019050.01.T02
Chr4 CDS 13852065 13852505 13852065 ID=MsG0480019050.01.T02:cds;Parent=MsG0480019050.01.T02
Chr4 CDS 13851489 13851675 13851489 ID=MsG0480019050.01.T02:cds;Parent=MsG0480019050.01.T02
Chr4 CDS 13851158 13851384 13851158 ID=MsG0480019050.01.T02:cds;Parent=MsG0480019050.01.T02
Chr4 CDS 13850718 13850930 13850718 ID=MsG0480019050.01.T02:cds;Parent=MsG0480019050.01.T02
Chr4 CDS 13849880 13849945 13849880 ID=MsG0480019050.01.T02:cds;Parent=MsG0480019050.01.T02
Chr4 three_prime_UTR 13849604 13849879 13849604 ID=MsG0480019050.01.T02:three_prime_utr;Parent=MsG0480019050.01.T02
Gene Sequence

>MsG0480019050.01.T02

ATGGGTGGAAAGAAGAAATTCATCGACAAAAAAAACTCGGTCACCTTCCATCTCATGGCACGTGACTCAACCGACCCAATATACACTGAATCCGACCGTGTTTTCGTCCGCGTCGACAACAATCCACTCTCCGCTGACTCCATCTTCGCCGATTCACCGGATGACCCCGACGCTGAATTCGACACCGAATATGCCGAAGACAGTGGAATTTTATCCGATGAAGTGAGGAAGGAGATACTTGAATTAGGGTTTCCTGATGATGGTTATAATTACTTGACTCATTTGAGAGAAATTAAGAATTCTGGTGGCGGTTCTAATTTCTTTAGTAATCCTAAGTTTAAGCTTGAGCATGTTAATGATGTTAAGGCTTACGATGCTTCGAGAGTGCGGGTTAAAGAGGTGGATGAAGAACCTGAAGAAAACATTTTGTACAATGTTGCGTCCAGCACTGCCAATGTCAGGGTTCAGAAAGCCGTTGATCCCGAGGTGGCTGCATTGCTAGATGACAGTGATGTGTCACGGTTTGGCTCTGATGTTGAAGATTTGGAGGAAGACTTTGTTGTCAAAGCTAACCTCTGTGAAGACGTAGATGATGAAGAGGAGGTACACATGCGTAATGGAATGAACTTCACTGAGGAGTCTATGAATAGGACCTTAAACAATGCGCACATATTGCAAGGTTCTGCTTATGCCACTGTTGCCGATGATTGTGGACCTTCAGATGGGGGTTCAAATGGTGCAACAGGTGTGTACTCTGCTGGTGAGAAGCCAAGACCCCGTCGTCTGTTAGATGAACAATTTGATTTGCTTGAATGTCAAGAGTATGGAACTGATGATAACAGCGATTATGGTGATGATTATTATGGTGATTATGAAGAAAATTATCAAGCTGAAGATGAGTCACTTGCCGAGAAGCTCAAACTCTCTCTTGGAACCCGTAAGGTGGAAGACCTAGAACATGAACAGAAGGGTCAGTACAAGGTTCCTGCAGAAGAAAGTAGCGATGAATCAGAAGTTTGGGATTGTGAGACTATTGTTTCAACGTACACAAATTTAGATAACCACCCTGGAAAGATTGAAACACCTTGGGCAACTAGGAAAAAGAAATTGACTGAAACTGTGACTGCAGCCTTTAATTCCTCTAGTCCAATAATCTCCTTAAGTGGAAAAGCAAAACTTCCTATAGACTTGCCTGGTGGTAGAAAACCTGCTGCTGAAAAGGCTGCTGTGAAAGAGGAACGTCGTGAGGCACGTCGCACTAAAAAAGAAATGAAGGAGCTTTATAATGTGAGGCAAATCGGGCACAAAGAGTTGCAGCTGGATCTGGTGGTTCATCCTATCATCTTATGTAAGTTTTCTAAATTTAAAATTTTGTTTCGATCTACCGTCAAAATCGGAAGCATTTATTTCTATACACATGGCAATAAGTTGCAGGTAAGTTTACAGTCACAAGTACCAGTTCTACTCGTTACTCATGTGTCTGCCATAGCACTACAATGA

>MsG0480019050.01.T01

ATGGGTGGAAAGAAGAAATTCATCGACAAAAAAAACTCGGTCACCTTCCATCTCATGGCACGTGACTCAACCGACCCAATATACACTGAATCCGACCGTGTTTTCGTCCGCGTCGACAACAATCCACTCTCCGCTGACTCCATCTTCGCCGATTCACCGGATGACCCCGACGCTGAATTCGACACCGAATATGCCGAAGACAGTGGAATTTTATCCGATGAAGTGAGGAAGGAGATACTTGAATTAGGGTTTCCTGATGATGGTTATAATTACTTGACTCATTTGAGAGAAATTAAGAATTCTGGTGGCGGTTCTAATTTCTTTAGTAATCCTAAGTTTAAGCTTGAGCATGTTAATGATGTTAAGGCTTACGATGCTTCGAGAGTGCGGGTTAAAGAGGTGGATGAAGAACCTGAAGAAAACATTTTGTACAATGTTGCGTCCAGCACTGCCAATGTCAGGGTTCAGAAAGCCGTTGATCCCGAGGTGGCTGCATTGCTAGATGACAGTGATGTGTCACGGTTTGGCTCTGATGTTGAAGATTTGGAGGAAGACTTTGTTGTCAAAGCTAACCTCTGTGAAGACGTAGATGATGAAGAGGAGGTACACATGCGTAATGGAATGAACTTCACTGAGGAGTCTATGAATAGGACCTTAAACAATGCGCACATATTGCAAGGTTCTGCTTATGCCACTGTTGCCGATGATTGTGGACCTTCAGATGGGGGTTCAAATGGTGCAACAGGTGTGTACTCTGCTGGTGAGAAGCCAAGACCCCGTCGTCTGTTAGATGAACAATTTGATTTGCTTGAATGTCAAGAGTATGGAACTGATGATAACAGCGATTATGGTGATGATTATTATGGTGATTATGAAGAAAATTATCAAGCTGAAGATGAGTCACTTGCCGAGAAGCTCAAACTCTCTCTTGGAACCCGTAAGGTGGAAGACCTAGAACATGAACAGAAGGGTCAGTACAAGGTTCCTGCAGAAGAAAGTAGCGATGAATCAGAAGTTTGGGATTGTGAGACTATTGTTTCAACGTACACAAATTTAGATAACCACCCTGGAAAGATTGAAACACCTTGGGCAACTAGGAAAAAGAAATTGACTGAAACTGTGACTGCAGCCTTTAATTCCTCTAGTCCAATAATCTCCTTAAGTGGAAAAGCAAAACTTCCTATAGACTTGCCTGGTGGTAGAAAACCTGCTGCTGAAAAGGCTGCTGTGAAAGAGGAACGTCGTGAGGCACGTCGCACTAAAAAAGAAATGAAGGAGCTTTATAATGTGAGGCAAATCGGGCACAAAGAGTTGCAGCTGGATCTGGTGGTTCATCCTATCATCTTATGTAAGTTTTCTAAATTTAAAATTTTGTTTCGATCTACCGTCAAAATCGGAAGCATTTATTTCTATACACATGGCAATAAGTTGCAGGTAAGTTTACAGTCACAAGTACCAGTTCTACTCGTTACTCATGTGTCTGCCATAGCACTACAATGA
Protein sequence

>MsG0480019050.01.T02

MGGKKKFIDKKNSVTFHLMARDSTDPIYTESDRVFVRVDNNPLSADSIFADSPDDPDAEFDTEYAEDSGILSDEVRKEILELGFPDDGYNYLTHLREIKNSGGGSNFFSNPKFKLEHVNDVKAYDASRVRVKEVDEEPEENILYNVASSTANVRVQKAVDPEVAALLDDSDVSRFGSDVEDLEEDFVVKANLCEDVDDEEEVHMRNGMNFTEESMNRTLNNAHILQGSAYATVADDCGPSDGGSNGATGVYSAGEKPRPRRLLDEQFDLLECQEYGTDDNSDYGDDYYGDYEENYQAEDESLAEKLKLSLGTRKVEDLEHEQKGQYKVPAEESSDESEVWDCETIVSTYTNLDNHPGKIETPWATRKKKLTETVTAAFNSSSPIISLSGKAKLPIDLPGGRKPAAEKAAVKEERREARRTKKEMKELYNVRQIGHKELQLDLVVHPIILCKFSKFKILFRSTVKIGSIYFYTHGNKLQVSLQSQVPVLLVTHVSAIALQ*

>MsG0480019050.01.T01

MGGKKKFIDKKNSVTFHLMARDSTDPIYTESDRVFVRVDNNPLSADSIFADSPDDPDAEFDTEYAEDSGILSDEVRKEILELGFPDDGYNYLTHLREIKNSGGGSNFFSNPKFKLEHVNDVKAYDASRVRVKEVDEEPEENILYNVASSTANVRVQKAVDPEVAALLDDSDVSRFGSDVEDLEEDFVVKANLCEDVDDEEEVHMRNGMNFTEESMNRTLNNAHILQGSAYATVADDCGPSDGGSNGATGVYSAGEKPRPRRLLDEQFDLLECQEYGTDDNSDYGDDYYGDYEENYQAEDESLAEKLKLSLGTRKVEDLEHEQKGQYKVPAEESSDESEVWDCETIVSTYTNLDNHPGKIETPWATRKKKLTETVTAAFNSSSPIISLSGKAKLPIDLPGGRKPAAEKAAVKEERREARRTKKEMKELYNVRQIGHKELQLDLVVHPIILCKFSKFKILFRSTVKIGSIYFYTHGNKLQVSLQSQVPVLLVTHVSAIALQ*